Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52255.t1 | RHN46952.1 | 82.4 | 369 | 64 | 1 | 1 | 368 | 1 | 369 | 3.00E-171 | 611.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52255.t1 | G7L4M6 | 82.4 | 369 | 64 | 1 | 1 | 368 | 1 | 369 | 2.1e-171 | 611.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52255.t1 | MTR_7g077620 | 82.162 | 370 | 65 | 1 | 1 | 369 | 1 | 370 | 0.0 | 613 |
MS.gene52255.t1 | MTR_7g077650 | 68.158 | 380 | 104 | 7 | 1 | 371 | 1 | 372 | 1.05e-170 | 481 |
MS.gene52255.t1 | MTR_7g077660 | 66.492 | 382 | 103 | 7 | 1 | 371 | 1 | 368 | 2.41e-165 | 467 |
MS.gene52255.t1 | MTR_7g076110 | 57.770 | 296 | 113 | 6 | 85 | 371 | 21 | 313 | 2.63e-103 | 307 |
MS.gene52255.t1 | MTR_7g076100 | 61.364 | 264 | 99 | 3 | 110 | 371 | 38 | 300 | 3.01e-100 | 299 |
MS.gene52255.t1 | MTR_7g076100 | 77.778 | 54 | 11 | 1 | 1 | 53 | 1 | 54 | 6.09e-21 | 92.4 |
MS.gene52255.t1 | MTR_1g108740 | 45.526 | 380 | 160 | 15 | 1 | 369 | 1 | 344 | 3.57e-88 | 270 |
MS.gene52255.t1 | MTR_5g038260 | 41.855 | 399 | 183 | 17 | 3 | 371 | 4 | 383 | 7.17e-78 | 244 |
MS.gene52255.t1 | MTR_5g038230 | 39.848 | 394 | 164 | 16 | 5 | 369 | 4 | 353 | 2.11e-72 | 229 |
MS.gene52255.t1 | MTR_1g064570 | 40.191 | 418 | 182 | 17 | 3 | 371 | 2 | 400 | 6.05e-72 | 230 |
MS.gene52255.t1 | MTR_5g082770 | 45.338 | 311 | 134 | 8 | 5 | 305 | 4 | 288 | 4.03e-68 | 216 |
MS.gene52255.t1 | MTR_1g016150 | 48.058 | 206 | 101 | 5 | 1 | 203 | 1 | 203 | 7.40e-51 | 170 |
MS.gene52255.t1 | MTR_7g076130 | 63.710 | 124 | 44 | 1 | 168 | 290 | 25 | 148 | 4.71e-47 | 157 |
MS.gene52255.t1 | MTR_5g082780 | 44.493 | 227 | 94 | 10 | 114 | 327 | 1 | 208 | 1.29e-38 | 138 |
MS.gene52255.t1 | MTR_1g108750 | 44.304 | 158 | 48 | 5 | 5 | 159 | 4 | 124 | 1.72e-22 | 92.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 76 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCAGAAGAATGTTATTT+TGG | 0.123370 | 7.4:-28551733 | MS.gene52255:CDS |
TTCTCAAAGTAAGTAAAATT+AGG | 0.221508 | 7.4:+28551778 | None:intergenic |
GTTGCAGCGATTTACGATTT+TGG | 0.237175 | 7.4:-28551970 | MS.gene52255:CDS |
TAGCAATGAGGAAGGTAAAT+TGG | 0.241317 | 7.4:-28552449 | None:intergenic |
TCAAGAGGATGCTACATCTT+TGG | 0.257601 | 7.4:-28551378 | MS.gene52255:CDS |
TTCCCAAAATAACATTCTTC+TGG | 0.264764 | 7.4:+28551730 | None:intergenic |
AATCAACAAACTTGAGAGTT+TGG | 0.291432 | 7.4:-28551575 | MS.gene52255:CDS |
CTTTAAAAGTAAAAGATGTT+TGG | 0.301037 | 7.4:-28552154 | MS.gene52255:CDS |
CAAGAGGATGCTACATCTTT+GGG | 0.301269 | 7.4:-28551377 | MS.gene52255:CDS |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.4:+28551997 | None:intergenic |
TTTAAAAGTAAAAGATGTTT+GGG | 0.344361 | 7.4:-28552153 | MS.gene52255:CDS |
TGTCTACGAGACAATTTGTT+TGG | 0.345267 | 7.4:+28552261 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.4:-28552380 | MS.gene52255:CDS |
GGAGGTATACTGCACTTAAA+AGG | 0.355148 | 7.4:+28552072 | None:intergenic |
AGAAGACTACCCTCTTAGTT+TGG | 0.364954 | 7.4:-28552418 | MS.gene52255:CDS |
TCTCAAAGTAAGTAAAATTA+GGG | 0.380672 | 7.4:+28551779 | None:intergenic |
TTCGAGATGTGGCAGACTAA+TGG | 0.382028 | 7.4:+28552050 | None:intergenic |
AGCATCCTCTTGAAGGAAAC+TGG | 0.389138 | 7.4:+28551388 | None:intergenic |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 7.4:-28551357 | MS.gene52255:CDS |
AAAGAGCAAGCCAATCATCT+TGG | 0.415307 | 7.4:-28551933 | MS.gene52255:CDS |
AAAAGGATTCACTAGAGTTA+TGG | 0.416187 | 7.4:+28552089 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7.4:-28552375 | MS.gene52255:CDS |
GTCTACGAGACAATTTGTTT+GGG | 0.423564 | 7.4:+28552262 | None:intergenic |
TGGAGGATTGTTGAATTTGA+AGG | 0.425039 | 7.4:+28551819 | None:intergenic |
GAAGGATGGGATAACCGAAT+AGG | 0.427778 | 7.4:+28552180 | None:intergenic |
AAGATGTTTGGGTTGTAGCC+AGG | 0.429738 | 7.4:-28552142 | MS.gene52255:CDS |
AAGATGTAGCATCCTCTTGA+AGG | 0.433762 | 7.4:+28551381 | None:intergenic |
TTGGTGTGGTGTGCAAGAAT+TGG | 0.448863 | 7.4:-28552356 | MS.gene52255:CDS |
TCGAGATGTGGCAGACTAAT+GGG | 0.454439 | 7.4:+28552051 | None:intergenic |
GTGAGAAAGAGTACCCTATT+CGG | 0.459694 | 7.4:-28552194 | MS.gene52255:CDS |
TTGTTTCTCCAAGTTTGAAA+AGG | 0.460734 | 7.4:-28551500 | MS.gene52255:CDS |
CCAGGGTTGGCTTGCACTAG+TGG | 0.460763 | 7.4:-28552124 | MS.gene52255:CDS |
AGCAATGAGGAAGGTAAATT+GGG | 0.461310 | 7.4:-28552448 | None:intergenic |
AAGGATGGGATAACCGAATA+GGG | 0.474880 | 7.4:+28552181 | None:intergenic |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.4:+28551996 | None:intergenic |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7.4:-28551356 | MS.gene52255:CDS |
AATCATTGACCGGAGACATA+TGG | 0.484616 | 7.4:-28551693 | MS.gene52255:CDS |
GGGTCATTTGAGTCATTACA+TGG | 0.486658 | 7.4:+28551799 | None:intergenic |
TTGTCAAGCACCAAACTAAG+AGG | 0.492976 | 7.4:+28552408 | None:intergenic |
GTTTGGGTTGTAGCCAGGGT+TGG | 0.496154 | 7.4:-28552137 | MS.gene52255:CDS |
CTTTACCAGTTTCCTTCAAG+AGG | 0.496755 | 7.4:-28551393 | MS.gene52255:CDS |
TAGGGTACTCTTTCTCACTT+AGG | 0.497329 | 7.4:+28552199 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.4:-28551992 | MS.gene52255:CDS |
CAACACGAATCCAAGATGAT+TGG | 0.503058 | 7.4:+28551923 | None:intergenic |
TAGTTTGGTGCTTGACAAGT+TGG | 0.509534 | 7.4:-28552403 | MS.gene52255:CDS |
CAAATCTATAATGCAAAGGA+TGG | 0.513573 | 7.4:-28551433 | MS.gene52255:CDS |
AGATGTTTGGGTTGTAGCCA+GGG | 0.516925 | 7.4:-28552141 | MS.gene52255:CDS |
CTTCAGTGTCGGCAAATACC+AGG | 0.519382 | 7.4:+28551857 | None:intergenic |
TTTCACCATCCATATGTCTC+CGG | 0.527974 | 7.4:+28551684 | None:intergenic |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 7.4:+28551349 | None:intergenic |
GGTCAGCAGACAAGGTAACC+TGG | 0.547547 | 7.4:+28552019 | None:intergenic |
GCTGCAACCACATAATCACT+TGG | 0.549128 | 7.4:+28551985 | None:intergenic |
TACGAGACAATTTGTTTGGG+AGG | 0.550477 | 7.4:+28552265 | None:intergenic |
CTGGTATTTGCCGACACTGA+AGG | 0.560387 | 7.4:-28551856 | MS.gene52255:CDS |
CCACTAGTGCAAGCCAACCC+TGG | 0.563322 | 7.4:+28552124 | None:intergenic |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.4:+28552011 | None:intergenic |
TTTGGGAGGATCATGAGCAT+AGG | 0.587679 | 7.4:+28552279 | None:intergenic |
GGGAGGATCATGAGCATAGG+TGG | 0.597353 | 7.4:+28552282 | None:intergenic |
GTTTGTATGAAAGCTTCAGC+GGG | 0.599734 | 7.4:+28551647 | None:intergenic |
CTCTCACTTAGCAATGAGGA+AGG | 0.604020 | 7.4:-28552457 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.4:+28551998 | None:intergenic |
GTTACAAATCTATAATGCAA+AGG | 0.608901 | 7.4:-28551437 | MS.gene52255:CDS |
AATGATGTCTCCTTCAGTGT+CGG | 0.624058 | 7.4:+28551846 | None:intergenic |
TTCAAACTTGGAGAAACAAG+AGG | 0.627779 | 7.4:+28551504 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.4:+28551986 | None:intergenic |
GATTCACTAGAGTTATGGCA+TGG | 0.641917 | 7.4:+28552094 | None:intergenic |
AGTTTGTATGAAAGCTTCAG+CGG | 0.645095 | 7.4:+28551646 | None:intergenic |
GTAGACATGCAAAATCAAAG+AGG | 0.650836 | 7.4:-28552245 | MS.gene52255:CDS |
TGTCAAGCACCAAACTAAGA+GGG | 0.658247 | 7.4:+28552409 | None:intergenic |
AGATCATGTTAGGTTTGGTG+TGG | 0.661894 | 7.4:-28552370 | MS.gene52255:CDS |
TGGTTGAGATGTTCGAGATG+TGG | 0.667918 | 7.4:+28552039 | None:intergenic |
ACATCTCGAACATCTCAACC+AGG | 0.682124 | 7.4:-28552037 | MS.gene52255:CDS |
TCATTTGAGTCATTACATGG+AGG | 0.686554 | 7.4:+28551802 | None:intergenic |
ATTGACCGGAGACATATGGA+TGG | 0.696827 | 7.4:-28551689 | MS.gene52255:CDS |
AGATGTGGCAGACTAATGGG+AGG | 0.724272 | 7.4:+28552054 | None:intergenic |
TTGGAACTAGACACCCAAAG+CGG | 0.762222 | 7.4:-28551610 | MS.gene52255:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAAAGTAAAAGATGTTT+GGG | - | chr7.4:28551642-28551661 | MS.gene52255:CDS | 15.0% |
!!! | ACTAATGTTGTATTTTATAA+AGG | - | chr7.4:28551915-28551934 | MS.gene52255:CDS | 15.0% |
!! | ACCATAAAAATCATCAATTT+AGG | - | chr7.4:28551481-28551500 | MS.gene52255:CDS | 20.0% |
!! | TCTCAAAGTAAGTAAAATTA+GGG | + | chr7.4:28552019-28552038 | None:intergenic | 20.0% |
!! | TTCTCAAAGTAAGTAAAATT+AGG | + | chr7.4:28552020-28552039 | None:intergenic | 20.0% |
!!! | ACATCTTTTACTTTTAAAGA+TGG | + | chr7.4:28551640-28551659 | None:intergenic | 20.0% |
!!! | CTTTAAAAGTAAAAGATGTT+TGG | - | chr7.4:28551641-28551660 | MS.gene52255:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+CGG | - | chr7.4:28552242-28552261 | MS.gene52255:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr7.4:28551485-28551504 | None:intergenic | 20.0% |
! | GTTACAAATCTATAATGCAA+AGG | - | chr7.4:28552358-28552377 | MS.gene52255:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr7.4:28552306-28552325 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr7.4:28552092-28552111 | MS.gene52255:CDS | 25.0% |
!!! | AACATTTTATTTGTCGGAAT+CGG | - | chr7.4:28552248-28552267 | MS.gene52255:CDS | 25.0% |
!!! | CAAACTCTTTGTTTTCAAAT+TGG | - | chr7.4:28552166-28552185 | MS.gene52255:CDS | 25.0% |
!!! | CTTTTACTTTTAAAGATGGA+AGG | + | chr7.4:28551636-28551655 | None:intergenic | 25.0% |
!!! | TTCCAGAAGAATGTTATTTT+GGG | - | chr7.4:28552063-28552082 | MS.gene52255:CDS | 25.0% |
!!! | TTTCCAGAAGAATGTTATTT+TGG | - | chr7.4:28552062-28552081 | MS.gene52255:CDS | 25.0% |
AAAAGGATTCACTAGAGTTA+TGG | + | chr7.4:28551709-28551728 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | - | chr7.4:28551415-28551434 | MS.gene52255:CDS | 30.0% | |
AATCAACAAACTTGAGAGTT+TGG | - | chr7.4:28552220-28552239 | MS.gene52255:CDS | 30.0% | |
CAAATCTATAATGCAAAGGA+TGG | - | chr7.4:28552362-28552381 | MS.gene52255:CDS | 30.0% | |
TTCCCAAAATAACATTCTTC+TGG | + | chr7.4:28552068-28552087 | None:intergenic | 30.0% | |
! | TGTTGTATTTTATAAAGGCC+TGG | - | chr7.4:28551920-28551939 | MS.gene52255:CDS | 30.0% |
! | TTGTTTCTCCAAGTTTGAAA+AGG | - | chr7.4:28552295-28552314 | MS.gene52255:CDS | 30.0% |
!! | ACTTTTAAAGATGGAAGGAT+GGG | + | chr7.4:28551631-28551650 | None:intergenic | 30.0% |
!! | TACTTTTAAAGATGGAAGGA+TGG | + | chr7.4:28551632-28551651 | None:intergenic | 30.0% |
!! | TTGTTTAACTTTTCCGCTTT+GGG | + | chr7.4:28552201-28552220 | None:intergenic | 30.0% |
!! | TTTGTTTAACTTTTCCGCTT+TGG | + | chr7.4:28552202-28552221 | None:intergenic | 30.0% |
AGTTTGTATGAAAGCTTCAG+CGG | + | chr7.4:28552152-28552171 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.4:28551802-28551821 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.4:28551420-28551439 | MS.gene52255:CDS | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr7.4:28552439-28552458 | MS.gene52255:CDS | 35.0% | |
GTAGACATGCAAAATCAAAG+AGG | - | chr7.4:28551550-28551569 | MS.gene52255:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.4:28551801-28551820 | None:intergenic | 35.0% | |
TCATTTGAGTCATTACATGG+AGG | + | chr7.4:28551996-28552015 | None:intergenic | 35.0% | |
TGGAGGATTGTTGAATTTGA+AGG | + | chr7.4:28551979-28551998 | None:intergenic | 35.0% | |
TTCAAACTTGGAGAAACAAG+AGG | + | chr7.4:28552294-28552313 | None:intergenic | 35.0% | |
! | GTCTACGAGACAATTTGTTT+GGG | + | chr7.4:28551536-28551555 | None:intergenic | 35.0% |
! | TGTCTACGAGACAATTTGTT+TGG | + | chr7.4:28551537-28551556 | None:intergenic | 35.0% |
AAAGAGCAAGCCAATCATCT+TGG | - | chr7.4:28551862-28551881 | MS.gene52255:CDS | 40.0% | |
AAGATGTAGCATCCTCTTGA+AGG | + | chr7.4:28552417-28552436 | None:intergenic | 40.0% | |
AAGGATGGGATAACCGAATA+GGG | + | chr7.4:28551617-28551636 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.4:28551800-28551819 | None:intergenic | 40.0% | |
AATCATTGACCGGAGACATA+TGG | - | chr7.4:28552102-28552121 | MS.gene52255:CDS | 40.0% | |
AATGATGTCTCCTTCAGTGT+CGG | + | chr7.4:28551952-28551971 | None:intergenic | 40.0% | |
AGAAGACTACCCTCTTAGTT+TGG | - | chr7.4:28551377-28551396 | MS.gene52255:CDS | 40.0% | |
CAACACGAATCCAAGATGAT+TGG | + | chr7.4:28551875-28551894 | None:intergenic | 40.0% | |
CAAGAGGATGCTACATCTTT+GGG | - | chr7.4:28552418-28552437 | MS.gene52255:CDS | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.4:28551812-28551831 | None:intergenic | 40.0% | |
CTTTACCAGTTTCCTTCAAG+AGG | - | chr7.4:28552402-28552421 | MS.gene52255:CDS | 40.0% | |
GATTCACTAGAGTTATGGCA+TGG | + | chr7.4:28551704-28551723 | None:intergenic | 40.0% | |
GGGTCATTTGAGTCATTACA+TGG | + | chr7.4:28551999-28552018 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr7.4:28552438-28552457 | MS.gene52255:CDS | 40.0% | |
GTTTGTATGAAAGCTTCAGC+GGG | + | chr7.4:28552151-28552170 | None:intergenic | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.4:28551803-28551822 | MS.gene52255:CDS | 40.0% | |
TCAAGAGGATGCTACATCTT+TGG | - | chr7.4:28552417-28552436 | MS.gene52255:CDS | 40.0% | |
TGTCAAGCACCAAACTAAGA+GGG | + | chr7.4:28551389-28551408 | None:intergenic | 40.0% | |
TTGTCAAGCACCAAACTAAG+AGG | + | chr7.4:28551390-28551409 | None:intergenic | 40.0% | |
TTTCACCATCCATATGTCTC+CGG | + | chr7.4:28552114-28552133 | None:intergenic | 40.0% | |
! | GGAGGTATACTGCACTTAAA+AGG | + | chr7.4:28551726-28551745 | None:intergenic | 40.0% |
! | GTTGCAGCGATTTACGATTT+TGG | - | chr7.4:28551825-28551844 | MS.gene52255:CDS | 40.0% |
! | TACGAGACAATTTGTTTGGG+AGG | + | chr7.4:28551533-28551552 | None:intergenic | 40.0% |
! | TAGGGTACTCTTTCTCACTT+AGG | + | chr7.4:28551599-28551618 | None:intergenic | 40.0% |
!! | AGATCATGTTAGGTTTGGTG+TGG | - | chr7.4:28551425-28551444 | MS.gene52255:CDS | 40.0% |
!! | GTGAGAAAGAGTACCCTATT+CGG | - | chr7.4:28551601-28551620 | MS.gene52255:CDS | 40.0% |
!! | TAGTTTGGTGCTTGACAAGT+TGG | - | chr7.4:28551392-28551411 | MS.gene52255:CDS | 40.0% |
ACATCTCGAACATCTCAACC+AGG | - | chr7.4:28551758-28551777 | MS.gene52255:CDS | 45.0% | |
AGCATCCTCTTGAAGGAAAC+TGG | + | chr7.4:28552410-28552429 | None:intergenic | 45.0% | |
ATTGACCGGAGACATATGGA+TGG | - | chr7.4:28552106-28552125 | MS.gene52255:CDS | 45.0% | |
GAAGGATGGGATAACCGAAT+AGG | + | chr7.4:28551618-28551637 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | chr7.4:28551813-28551832 | None:intergenic | 45.0% | |
TCGAGATGTGGCAGACTAAT+GGG | + | chr7.4:28551747-28551766 | None:intergenic | 45.0% | |
TGGTTGAGATGTTCGAGATG+TGG | + | chr7.4:28551759-28551778 | None:intergenic | 45.0% | |
TTCGAGATGTGGCAGACTAA+TGG | + | chr7.4:28551748-28551767 | None:intergenic | 45.0% | |
TTGGAACTAGACACCCAAAG+CGG | - | chr7.4:28552185-28552204 | MS.gene52255:CDS | 45.0% | |
TTGGTGTGGTGTGCAAGAAT+TGG | - | chr7.4:28551439-28551458 | MS.gene52255:CDS | 45.0% | |
TTTGGGAGGATCATGAGCAT+AGG | + | chr7.4:28551519-28551538 | None:intergenic | 45.0% | |
!! | AAGATGTTTGGGTTGTAGCC+AGG | - | chr7.4:28551653-28551672 | MS.gene52255:CDS | 45.0% |
!! | AGATGTTTGGGTTGTAGCCA+GGG | - | chr7.4:28551654-28551673 | MS.gene52255:CDS | 45.0% |
AGATGTGGCAGACTAATGGG+AGG | + | chr7.4:28551744-28551763 | None:intergenic | 50.0% | |
CTGGTATTTGCCGACACTGA+AGG | - | chr7.4:28551939-28551958 | MS.gene52255:CDS | 50.0% | |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.4:28551787-28551806 | None:intergenic | 50.0% |
!! | CTTCAGTGTCGGCAAATACC+AGG | + | chr7.4:28551941-28551960 | None:intergenic | 50.0% |
GGGAGGATCATGAGCATAGG+TGG | + | chr7.4:28551516-28551535 | None:intergenic | 55.0% | |
GGTCAGCAGACAAGGTAACC+TGG | + | chr7.4:28551779-28551798 | None:intergenic | 55.0% | |
!! | GTTTGGGTTGTAGCCAGGGT+TGG | - | chr7.4:28551658-28551677 | MS.gene52255:CDS | 55.0% |
CCACTAGTGCAAGCCAACCC+TGG | + | chr7.4:28551674-28551693 | None:intergenic | 60.0% | |
!! | CCAGGGTTGGCTTGCACTAG+TGG | - | chr7.4:28551671-28551690 | MS.gene52255:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 28551351 | 28552466 | 28551351 | ID=MS.gene52255 |
chr7.4 | mRNA | 28551351 | 28552466 | 28551351 | ID=MS.gene52255.t1;Parent=MS.gene52255 |
chr7.4 | exon | 28551351 | 28552466 | 28551351 | ID=MS.gene52255.t1.exon1;Parent=MS.gene52255.t1 |
chr7.4 | CDS | 28551351 | 28552466 | 28551351 | ID=cds.MS.gene52255.t1;Parent=MS.gene52255.t1 |
Gene Sequence |
Protein sequence |