Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73723.t1 | RHN46952.1 | 68.2 | 371 | 105 | 3 | 1 | 360 | 1 | 369 | 2.40E-133 | 485.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73723.t1 | G7L4M6 | 68.2 | 371 | 105 | 3 | 1 | 360 | 1 | 369 | 1.7e-133 | 485.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73723.t1 | MTR_7g077620 | 68.011 | 372 | 106 | 3 | 1 | 361 | 1 | 370 | 7.04e-174 | 489 |
MS.gene73723.t1 | MTR_7g077650 | 65.263 | 380 | 107 | 10 | 1 | 363 | 1 | 372 | 1.16e-154 | 439 |
MS.gene73723.t1 | MTR_7g077660 | 62.334 | 377 | 119 | 10 | 1 | 363 | 1 | 368 | 9.37e-146 | 417 |
MS.gene73723.t1 | MTR_1g108740 | 44.205 | 371 | 170 | 15 | 1 | 361 | 1 | 344 | 2.99e-85 | 262 |
MS.gene73723.t1 | MTR_7g076110 | 49.831 | 295 | 127 | 6 | 87 | 363 | 22 | 313 | 3.48e-82 | 253 |
MS.gene73723.t1 | MTR_7g076100 | 58.475 | 236 | 86 | 3 | 139 | 363 | 66 | 300 | 1.58e-80 | 248 |
MS.gene73723.t1 | MTR_7g076100 | 78.182 | 55 | 10 | 2 | 1 | 54 | 1 | 54 | 7.75e-19 | 86.3 |
MS.gene73723.t1 | MTR_5g038260 | 40.351 | 399 | 181 | 15 | 3 | 363 | 4 | 383 | 4.95e-74 | 234 |
MS.gene73723.t1 | MTR_5g038230 | 40.568 | 387 | 163 | 15 | 5 | 361 | 4 | 353 | 2.27e-70 | 224 |
MS.gene73723.t1 | MTR_1g064570 | 39.379 | 419 | 176 | 16 | 3 | 363 | 2 | 400 | 3.55e-70 | 225 |
MS.gene73723.t1 | MTR_5g082770 | 44.590 | 305 | 136 | 9 | 5 | 296 | 4 | 288 | 2.03e-65 | 209 |
MS.gene73723.t1 | MTR_1g016150 | 45.652 | 230 | 107 | 7 | 1 | 216 | 1 | 226 | 1.83e-52 | 174 |
MS.gene73723.t1 | MTR_5g082780 | 39.035 | 228 | 115 | 8 | 115 | 328 | 1 | 218 | 1.30e-31 | 119 |
MS.gene73723.t1 | MTR_7g076130 | 50.769 | 130 | 49 | 5 | 169 | 284 | 25 | 153 | 4.02e-26 | 102 |
MS.gene73723.t1 | MTR_1g108750 | 43.949 | 157 | 51 | 6 | 5 | 160 | 4 | 124 | 2.11e-21 | 89.0 |
MS.gene73723.t1 | MTR_3g114970 | 24.148 | 352 | 200 | 11 | 4 | 324 | 3 | 318 | 3.42e-17 | 82.0 |
MS.gene73723.t1 | MTR_3g114990 | 26.110 | 383 | 209 | 16 | 4 | 340 | 22 | 376 | 3.71e-17 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 73 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTCCATCCTTCACATTA+TGG | 0.195674 | 6.3:+34920402 | None:intergenic |
CAAACTCTACGTTTACAAAT+TGG | 0.205980 | 6.3:-34920606 | MS.gene73723:CDS |
TTTCAACATACTTGAGAGTT+TGG | 0.271304 | 6.3:-34920552 | MS.gene73723:CDS |
CAACCGGATGTCACATCTTT+GGG | 0.283463 | 6.3:-34920351 | MS.gene73723:CDS |
GTTGAACCCGAAGCTTAAAA+TGG | 0.296182 | 6.3:+34920775 | None:intergenic |
TCAACCGGATGTCACATCTT+TGG | 0.300744 | 6.3:-34920352 | MS.gene73723:CDS |
TAATTACTTGGGCTTGTAAT+CGG | 0.303729 | 6.3:+34920944 | None:intergenic |
GGAGCTACACAATACTTAAA+AGG | 0.322226 | 6.3:+34921019 | None:intergenic |
GACATCCGGTTGAAGGAAAT+TGG | 0.322776 | 6.3:+34920362 | None:intergenic |
TGGATTCGTGTAAACAGATA+TGG | 0.324446 | 6.3:-34920860 | MS.gene73723:CDS |
CAATGAAATGACGGTGTGTT+TGG | 0.335412 | 6.3:-34921101 | MS.gene73723:CDS |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 6.3:-34921330 | MS.gene73723:CDS |
AAAAGGATTCGCTAGTGTTA+TGG | 0.360726 | 6.3:+34921036 | None:intergenic |
GAAGGATGGGATAATTGAAT+AGG | 0.370358 | 6.3:+34921127 | None:intergenic |
AGAAGGTCTACCTCTTAGTT+TGG | 0.383875 | 6.3:-34921368 | MS.gene73723:CDS |
CTACGTTTACAAATTGGAAC+TGG | 0.389715 | 6.3:-34920600 | MS.gene73723:CDS |
CTTTACCAATTTCCTTCAAC+CGG | 0.393860 | 6.3:-34920367 | MS.gene73723:CDS |
TTTCCAGAACAATATCATTA+CGG | 0.401041 | 6.3:-34920713 | MS.gene73723:CDS |
CCATGGTTGGCTTGCATTGG+TGG | 0.402911 | 6.3:-34921071 | MS.gene73723:CDS |
TTGGAGAGGTGGCAGACTAA+TGG | 0.403671 | 6.3:+34920997 | None:intergenic |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 6.3:-34920331 | MS.gene73723:CDS |
AGGCAATGAGGAAGGTAGAT+TGG | 0.421191 | 6.3:-34921399 | None:intergenic |
AAAGAGCAAGTCAATCATCT+TGG | 0.426179 | 6.3:-34920880 | MS.gene73723:CDS |
TGGAGAGGTGGCAGACTAAT+GGG | 0.429349 | 6.3:+34920998 | None:intergenic |
CCTCCGTAATGATATTGTTC+TGG | 0.431440 | 6.3:+34920710 | None:intergenic |
GTAGATTGGGCAAATTTAGA+AGG | 0.435773 | 6.3:-34921385 | MS.gene73723:CDS |
AATTACTTGGGCTTGTAATC+GGG | 0.438323 | 6.3:+34920945 | None:intergenic |
GCTGCAACCACATAATTACT+TGG | 0.439750 | 6.3:+34920932 | None:intergenic |
CATTTCATTGATTGAAGGAT+GGG | 0.455943 | 6.3:+34921114 | None:intergenic |
AAGGATGGGATAATTGAATA+GGG | 0.463451 | 6.3:+34921128 | None:intergenic |
AATGAAATGACGGTGTGTTT+GGG | 0.468609 | 6.3:-34921100 | MS.gene73723:CDS |
GGCAATGAGGAAGGTAGATT+GGG | 0.471328 | 6.3:-34921398 | None:intergenic |
TAGTTTGGTTCTTGAGAAGT+TGG | 0.473111 | 6.3:-34921353 | MS.gene73723:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 6.3:-34920330 | MS.gene73723:CDS |
TAGCCATGGTTGGCTTGCAT+TGG | 0.484269 | 6.3:-34921074 | MS.gene73723:CDS |
AATCAATGACCGGAGACATA+TGG | 0.484616 | 6.3:-34920670 | MS.gene73723:CDS |
TCATTTCATTGATTGAAGGA+TGG | 0.486040 | 6.3:+34921113 | None:intergenic |
ACCTCTCCAATCTGTTTACA+AGG | 0.490029 | 6.3:-34920984 | MS.gene73723:CDS |
ACCGTCATTTCATTGATTGA+AGG | 0.491455 | 6.3:+34921109 | None:intergenic |
TTCTCAAGAACCAAACTAAG+AGG | 0.491952 | 6.3:+34921358 | None:intergenic |
CTGATATTTGCTGTTGGCAA+CGG | 0.495311 | 6.3:-34920803 | MS.gene73723:CDS |
CAATTCTGCTTGTTATGAGA+TGG | 0.510153 | 6.3:-34920753 | MS.gene73723:CDS |
AAGATGTGACATCCGGTTGA+AGG | 0.515408 | 6.3:+34920355 | None:intergenic |
TACAAGCCCAAGTAATTATG+TGG | 0.515745 | 6.3:-34920939 | MS.gene73723:CDS |
CAAATCCATAATGTGAAGGA+TGG | 0.524725 | 6.3:-34920407 | MS.gene73723:CDS |
TTTCACCATCCATATGTCTC+CGG | 0.527974 | 6.3:+34920661 | None:intergenic |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 6.3:+34920323 | None:intergenic |
GTGTGTTTGGGCGTTAGCCA+TGG | 0.536708 | 6.3:-34921088 | MS.gene73723:CDS |
AAAGGTCTGATATTTGCTGT+TGG | 0.547450 | 6.3:-34920809 | MS.gene73723:CDS |
GTTTGGGCGTTAGCCATGGT+TGG | 0.554659 | 6.3:-34921084 | MS.gene73723:CDS |
AGGTAACCTTGTAAACAGAT+TGG | 0.555212 | 6.3:+34920978 | None:intergenic |
GAACCCAAAGATGTGACATC+CGG | 0.561035 | 6.3:+34920348 | None:intergenic |
TTCGTGTGGTGTGCAAGACT+TGG | 0.561436 | 6.3:-34921306 | MS.gene73723:CDS |
CTGCAACCACATAATTACTT+GGG | 0.562894 | 6.3:+34920933 | None:intergenic |
GAGAGGATCATCAACATAGG+AGG | 0.569522 | 6.3:+34921229 | None:intergenic |
CAGAACAATATCATTACGGA+GGG | 0.584738 | 6.3:-34920709 | MS.gene73723:CDS |
TATGAGAATTATTGTATGAG+AGG | 0.586159 | 6.3:+34921212 | None:intergenic |
TCCTTCAATCAATGAAATGA+CGG | 0.587156 | 6.3:-34921110 | MS.gene73723:CDS |
ATTATGATAGGCAATGAGGA+AGG | 0.591409 | 6.3:-34921407 | None:intergenic |
GTTGCAGCGATTTACAATTG+TGG | 0.603650 | 6.3:-34920917 | MS.gene73723:CDS |
TTGTAAACAGATTGGAGAGG+TGG | 0.610040 | 6.3:+34920986 | None:intergenic |
GTTACAAATCCATAATGTGA+AGG | 0.610111 | 6.3:-34920411 | MS.gene73723:CDS |
AGAGGATCATCAACATAGGA+GGG | 0.610715 | 6.3:+34921230 | None:intergenic |
TTGGAACTGGACCCTATGAG+TGG | 0.614160 | 6.3:-34920587 | MS.gene73723:CDS |
TATGAGAGGATCATCAACAT+AGG | 0.617496 | 6.3:+34921226 | None:intergenic |
CCAGAACAATATCATTACGG+AGG | 0.624405 | 6.3:-34920710 | MS.gene73723:CDS |
AGTTTGCATAAATGCTTGCG+AGG | 0.629904 | 6.3:+34920623 | None:intergenic |
AGATCATGTTAGGTTTCGTG+TGG | 0.631367 | 6.3:-34921320 | MS.gene73723:CDS |
AAATTGGTAAAGATTGACTA+CGG | 0.637052 | 6.3:+34920378 | None:intergenic |
TGTAATCGGGTCATCAGACA+AGG | 0.645501 | 6.3:+34920958 | None:intergenic |
CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 6.3:+34921071 | None:intergenic |
AATGACCGGAGACATATGGA+TGG | 0.696827 | 6.3:-34920666 | MS.gene73723:CDS |
ACCTTGTAAACAGATTGGAG+AGG | 0.742777 | 6.3:+34920983 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAATTTATTTTATTTATGA+TGG | - | chr6.3:34921267-34921286 | MS.gene73723:CDS | 10.0% |
!! | ACCATAAAAATCATCAATTT+AGG | - | chr6.3:34920458-34920477 | MS.gene73723:CDS | 20.0% |
!!! | AACATTTTATTTGTTGGAAT+CGG | - | chr6.3:34921195-34921214 | MS.gene73723:CDS | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | chr6.3:34920892-34920911 | MS.gene73723:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr6.3:34920462-34920481 | None:intergenic | 20.0% |
! | AAATTGGTAAAGATTGACTA+CGG | + | chr6.3:34921344-34921363 | None:intergenic | 25.0% |
! | TATGAGAATTATTGTATGAG+AGG | + | chr6.3:34920510-34920529 | None:intergenic | 25.0% |
! | TTTCCAGAACAATATCATTA+CGG | - | chr6.3:34921006-34921025 | MS.gene73723:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr6.3:34921253-34921272 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCAATGAC+CGG | - | chr6.3:34921039-34921058 | MS.gene73723:CDS | 25.0% |
!!! | GAAAGCAACATTTTATTTGT+TGG | - | chr6.3:34921189-34921208 | MS.gene73723:CDS | 25.0% |
!!! | TATTTTATTTATGATGGCGA+CGG | - | chr6.3:34921273-34921292 | MS.gene73723:CDS | 25.0% |
!!! | TTGTTTTTCCAAGTTTGAAA+AGG | - | chr6.3:34921242-34921261 | MS.gene73723:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | chr6.3:34920389-34920408 | MS.gene73723:CDS | 30.0% | |
AAGGATGGGATAATTGAATA+GGG | + | chr6.3:34920594-34920613 | None:intergenic | 30.0% | |
CAAACTCTACGTTTACAAAT+TGG | - | chr6.3:34921113-34921132 | MS.gene73723:CDS | 30.0% | |
GTTACAAATCCATAATGTGA+AGG | - | chr6.3:34921308-34921327 | MS.gene73723:CDS | 30.0% | |
TAATTACTTGGGCTTGTAAT+CGG | + | chr6.3:34920778-34920797 | None:intergenic | 30.0% | |
TCCTTCAATCAATGAAATGA+CGG | - | chr6.3:34920609-34920628 | MS.gene73723:CDS | 30.0% | |
TTCAAACTTGGAAAAACAAG+AGG | + | chr6.3:34921241-34921260 | None:intergenic | 30.0% | |
TTTCAACATACTTGAGAGTT+TGG | - | chr6.3:34921167-34921186 | MS.gene73723:CDS | 30.0% | |
! | CATTTCATTGATTGAAGGAT+GGG | + | chr6.3:34920608-34920627 | None:intergenic | 30.0% |
! | TCATTTCATTGATTGAAGGA+TGG | + | chr6.3:34920609-34920628 | None:intergenic | 30.0% |
!! | GTTTAACTTTTCCACTCATA+GGG | + | chr6.3:34921146-34921165 | None:intergenic | 30.0% |
!! | TGTTTAACTTTTCCACTCAT+AGG | + | chr6.3:34921147-34921166 | None:intergenic | 30.0% |
AAAAGGATTCGCTAGTGTTA+TGG | + | chr6.3:34920686-34920705 | None:intergenic | 35.0% | |
AAAGAGCAAGTCAATCATCT+TGG | - | chr6.3:34920839-34920858 | MS.gene73723:CDS | 35.0% | |
AACTTCCATCCTTCACATTA+TGG | + | chr6.3:34921320-34921339 | None:intergenic | 35.0% | |
AATGAAATGACGGTGTGTTT+GGG | - | chr6.3:34920619-34920638 | MS.gene73723:CDS | 35.0% | |
AATTACTTGGGCTTGTAATC+GGG | + | chr6.3:34920777-34920796 | None:intergenic | 35.0% | |
AGGTAACCTTGTAAACAGAT+TGG | + | chr6.3:34920744-34920763 | None:intergenic | 35.0% | |
CAAATCCATAATGTGAAGGA+TGG | - | chr6.3:34921312-34921331 | MS.gene73723:CDS | 35.0% | |
CAGAACAATATCATTACGGA+GGG | - | chr6.3:34921010-34921029 | MS.gene73723:CDS | 35.0% | |
CTACGTTTACAAATTGGAAC+TGG | - | chr6.3:34921119-34921138 | MS.gene73723:CDS | 35.0% | |
CTGCAACCACATAATTACTT+GGG | + | chr6.3:34920789-34920808 | None:intergenic | 35.0% | |
CTTTACCAATTTCCTTCAAC+CGG | - | chr6.3:34921352-34921371 | MS.gene73723:CDS | 35.0% | |
GAAGGATGGGATAATTGAAT+AGG | + | chr6.3:34920595-34920614 | None:intergenic | 35.0% | |
GGAGCTACACAATACTTAAA+AGG | + | chr6.3:34920703-34920722 | None:intergenic | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr6.3:34921389-34921408 | MS.gene73723:CDS | 35.0% | |
GTAGATTGGGCAAATTTAGA+AGG | - | chr6.3:34920334-34920353 | MS.gene73723:CDS | 35.0% | |
TACAAGCCCAAGTAATTATG+TGG | - | chr6.3:34920780-34920799 | MS.gene73723:CDS | 35.0% | |
TATGAGAGGATCATCAACAT+AGG | + | chr6.3:34920496-34920515 | None:intergenic | 35.0% | |
TGGATTCGTGTAAACAGATA+TGG | - | chr6.3:34920859-34920878 | MS.gene73723:CDS | 35.0% | |
TTCTCAAGAACCAAACTAAG+AGG | + | chr6.3:34920364-34920383 | None:intergenic | 35.0% | |
! | ACCGTCATTTCATTGATTGA+AGG | + | chr6.3:34920613-34920632 | None:intergenic | 35.0% |
!! | AAAGGTCTGATATTTGCTGT+TGG | - | chr6.3:34920910-34920929 | MS.gene73723:CDS | 35.0% |
!! | CAATTCTGCTTGTTATGAGA+TGG | - | chr6.3:34920966-34920985 | MS.gene73723:CDS | 35.0% |
!! | TAGTTTGGTTCTTGAGAAGT+TGG | - | chr6.3:34920366-34920385 | MS.gene73723:CDS | 35.0% |
AACTTGGAAAAACAAGAGGC+TGG | + | chr6.3:34921237-34921256 | None:intergenic | 40.0% | |
AATCAATGACCGGAGACATA+TGG | - | chr6.3:34921049-34921068 | MS.gene73723:CDS | 40.0% | |
ACCTCTCCAATCTGTTTACA+AGG | - | chr6.3:34920735-34920754 | MS.gene73723:CDS | 40.0% | |
ACCTTGTAAACAGATTGGAG+AGG | + | chr6.3:34920739-34920758 | None:intergenic | 40.0% | |
AGAAGGTCTACCTCTTAGTT+TGG | - | chr6.3:34920351-34920370 | MS.gene73723:CDS | 40.0% | |
AGAGGATCATCAACATAGGA+GGG | + | chr6.3:34920492-34920511 | None:intergenic | 40.0% | |
AGATCATGTTAGGTTTCGTG+TGG | - | chr6.3:34920399-34920418 | MS.gene73723:CDS | 40.0% | |
AGTTTGCATAAATGCTTGCG+AGG | + | chr6.3:34921099-34921118 | None:intergenic | 40.0% | |
CAATGAAATGACGGTGTGTT+TGG | - | chr6.3:34920618-34920637 | MS.gene73723:CDS | 40.0% | |
CCAGAACAATATCATTACGG+AGG | - | chr6.3:34921009-34921028 | MS.gene73723:CDS | 40.0% | |
CCTCCGTAATGATATTGTTC+TGG | + | chr6.3:34921012-34921031 | None:intergenic | 40.0% | |
GCTGCAACCACATAATTACT+TGG | + | chr6.3:34920790-34920809 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr6.3:34921388-34921407 | MS.gene73723:CDS | 40.0% | |
GTTGAACCCGAAGCTTAAAA+TGG | + | chr6.3:34920947-34920966 | None:intergenic | 40.0% | |
GTTGCAGCGATTTACAATTG+TGG | - | chr6.3:34920802-34920821 | MS.gene73723:CDS | 40.0% | |
TTGTAAACAGATTGGAGAGG+TGG | + | chr6.3:34920736-34920755 | None:intergenic | 40.0% | |
TTTCACCATCCATATGTCTC+CGG | + | chr6.3:34921061-34921080 | None:intergenic | 40.0% | |
! | GAGACACCATTTTAAGCTTC+GGG | - | chr6.3:34920938-34920957 | MS.gene73723:CDS | 40.0% |
! | GGAGACACCATTTTAAGCTT+CGG | - | chr6.3:34920937-34920956 | MS.gene73723:CDS | 40.0% |
!! | CTGATATTTGCTGTTGGCAA+CGG | - | chr6.3:34920916-34920935 | MS.gene73723:CDS | 40.0% |
AAGATGTGACATCCGGTTGA+AGG | + | chr6.3:34921367-34921386 | None:intergenic | 45.0% | |
AATGACCGGAGACATATGGA+TGG | - | chr6.3:34921053-34921072 | MS.gene73723:CDS | 45.0% | |
CAACCGGATGTCACATCTTT+GGG | - | chr6.3:34921368-34921387 | MS.gene73723:CDS | 45.0% | |
GAACCCAAAGATGTGACATC+CGG | + | chr6.3:34921374-34921393 | None:intergenic | 45.0% | |
GACATCCGGTTGAAGGAAAT+TGG | + | chr6.3:34921360-34921379 | None:intergenic | 45.0% | |
GAGAGGATCATCAACATAGG+AGG | + | chr6.3:34920493-34920512 | None:intergenic | 45.0% | |
TCAACCGGATGTCACATCTT+TGG | - | chr6.3:34921367-34921386 | MS.gene73723:CDS | 45.0% | |
TGTAATCGGGTCATCAGACA+AGG | + | chr6.3:34920764-34920783 | None:intergenic | 45.0% | |
TGGAGAGGTGGCAGACTAAT+GGG | + | chr6.3:34920724-34920743 | None:intergenic | 50.0% | |
TTCGTGTGGTGTGCAAGACT+TGG | - | chr6.3:34920413-34920432 | MS.gene73723:CDS | 50.0% | |
TTGGAACTGGACCCTATGAG+TGG | - | chr6.3:34921132-34921151 | MS.gene73723:CDS | 50.0% | |
TTGGAGAGGTGGCAGACTAA+TGG | + | chr6.3:34920725-34920744 | None:intergenic | 50.0% | |
!! | TAGCCATGGTTGGCTTGCAT+TGG | - | chr6.3:34920645-34920664 | MS.gene73723:CDS | 50.0% |
CCACCAATGCAAGCCAACCA+TGG | + | chr6.3:34920651-34920670 | None:intergenic | 55.0% | |
GTGTGTTTGGGCGTTAGCCA+TGG | - | chr6.3:34920631-34920650 | MS.gene73723:CDS | 55.0% | |
GTTTGGGCGTTAGCCATGGT+TGG | - | chr6.3:34920635-34920654 | MS.gene73723:CDS | 55.0% | |
!! | CCATGGTTGGCTTGCATTGG+TGG | - | chr6.3:34920648-34920667 | MS.gene73723:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 34920325 | 34921416 | 34920325 | ID=MS.gene73723 |
chr6.3 | mRNA | 34920325 | 34921416 | 34920325 | ID=MS.gene73723.t1;Parent=MS.gene73723 |
chr6.3 | exon | 34920325 | 34921416 | 34920325 | ID=MS.gene73723.t1.exon1;Parent=MS.gene73723.t1 |
chr6.3 | CDS | 34920325 | 34921416 | 34920325 | ID=cds.MS.gene73723.t1;Parent=MS.gene73723.t1 |
Gene Sequence |
Protein sequence |