Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27751.t1 | RHN46952.1 | 69 | 371 | 111 | 3 | 1 | 369 | 1 | 369 | 1.50E-143 | 519.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27751.t1 | G7L4M6 | 69.0 | 371 | 111 | 3 | 1 | 369 | 1 | 369 | 1.1e-143 | 519.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27751.t1 | MTR_7g077620 | 69.003 | 371 | 111 | 3 | 1 | 369 | 1 | 369 | 0.0 | 521 |
MS.gene27751.t1 | MTR_7g077650 | 69.496 | 377 | 105 | 5 | 1 | 372 | 1 | 372 | 0.0 | 514 |
MS.gene27751.t1 | MTR_7g077660 | 67.021 | 376 | 112 | 6 | 1 | 372 | 1 | 368 | 1.80e-170 | 480 |
MS.gene27751.t1 | MTR_7g076110 | 57.095 | 296 | 114 | 6 | 86 | 372 | 22 | 313 | 1.31e-104 | 310 |
MS.gene27751.t1 | MTR_7g076100 | 64.378 | 233 | 77 | 4 | 143 | 372 | 71 | 300 | 1.93e-95 | 287 |
MS.gene27751.t1 | MTR_7g076100 | 77.778 | 54 | 11 | 1 | 1 | 53 | 1 | 54 | 4.17e-20 | 90.1 |
MS.gene27751.t1 | MTR_1g108740 | 42.670 | 382 | 169 | 15 | 1 | 370 | 1 | 344 | 3.77e-83 | 257 |
MS.gene27751.t1 | MTR_5g038260 | 42.145 | 401 | 180 | 16 | 3 | 372 | 4 | 383 | 5.30e-83 | 258 |
MS.gene27751.t1 | MTR_5g038230 | 41.814 | 397 | 153 | 17 | 5 | 370 | 4 | 353 | 8.56e-79 | 246 |
MS.gene27751.t1 | MTR_5g082770 | 43.910 | 312 | 136 | 8 | 5 | 304 | 4 | 288 | 4.01e-71 | 224 |
MS.gene27751.t1 | MTR_1g064570 | 38.732 | 426 | 178 | 18 | 3 | 372 | 2 | 400 | 1.48e-69 | 224 |
MS.gene27751.t1 | MTR_1g016150 | 48.634 | 183 | 87 | 5 | 1 | 179 | 1 | 180 | 5.10e-48 | 163 |
MS.gene27751.t1 | MTR_7g076130 | 58.594 | 128 | 49 | 2 | 165 | 289 | 22 | 148 | 5.65e-42 | 144 |
MS.gene27751.t1 | MTR_5g082780 | 37.712 | 236 | 115 | 10 | 114 | 336 | 1 | 217 | 4.70e-35 | 129 |
MS.gene27751.t1 | MTR_1g108750 | 46.795 | 156 | 47 | 4 | 5 | 159 | 4 | 124 | 5.94e-26 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 81 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGTAATCAGAATGATTT+AGG | 0.091939 | 7.3:-29164837 | MS.gene27751:CDS |
AAAGACCAAACCAATCATTT+TGG | 0.176374 | 7.3:-29165313 | MS.gene27751:CDS |
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7.3:+29165158 | None:intergenic |
TGGATTCGTGTAAACAATAA+TGG | 0.271150 | 7.3:-29165293 | MS.gene27751:CDS |
GATGAACAAACTTGAGAGTT+TGG | 0.285385 | 7.3:-29164958 | MS.gene27751:CDS |
CTCCAGGTTGGAAAAGGATT+TGG | 0.301823 | 7.3:-29164874 | MS.gene27751:CDS |
ACACTCTTTCATTGTATTGA+TGG | 0.308234 | 7.3:+29165538 | None:intergenic |
CAATACAATGAAAGAGTGTT+TGG | 0.308788 | 7.3:-29165534 | MS.gene27751:CDS |
GGAGCTATACTGCACTTAAA+AGG | 0.329955 | 7.3:+29165452 | None:intergenic |
GAAGGATGGGATAATTGAAT+AGG | 0.335830 | 7.3:+29165560 | None:intergenic |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.3:+29165377 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.3:-29165760 | MS.gene27751:CDS |
CATCCGCCTCTTGTTTCTCC+AGG | 0.350422 | 7.3:-29164890 | MS.gene27751:CDS |
CGCCTCTTGTTTCTCCAGGT+TGG | 0.365401 | 7.3:-29164886 | MS.gene27751:CDS |
CCAAGTGATTATGTGGTTGC+AGG | 0.365765 | 7.3:-29165365 | MS.gene27751:CDS |
CAGCTATAATAAGATTGTTC+TGG | 0.368066 | 7.3:+29165110 | None:intergenic |
GATTGTTCTGGATCAATATA+TGG | 0.371210 | 7.3:+29165122 | None:intergenic |
AGATGCATATCCTCTTAGTT+TGG | 0.376506 | 7.3:-29165798 | MS.gene27751:CDS |
TCAAGAGGTGGCAGAGTAAT+GGG | 0.378121 | 7.3:+29165431 | None:intergenic |
TAGCAATGAGGAAGGTTGAT+TGG | 0.381788 | 7.3:-29165829 | None:intergenic |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7.3:+29165159 | None:intergenic |
GGTTGCAGGGATTTACCAAT+TGG | 0.397037 | 7.3:-29165351 | MS.gene27751:CDS |
AAGGTAATCAGAATGATTTA+GGG | 0.402253 | 7.3:-29164836 | MS.gene27751:CDS |
CCATGGTTGGCTTGCACTAG+TGG | 0.416361 | 7.3:-29165504 | MS.gene27751:CDS |
GGGTTGTACCACAATTTCAA+TGG | 0.418918 | 7.3:-29164734 | MS.gene27751:CDS |
CGAATCCAAAATGATTGGTT+TGG | 0.419723 | 7.3:+29165308 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7.3:-29165755 | MS.gene27751:CDS |
ACATGTTCACAAATTGCAAC+TGG | 0.426873 | 7.3:-29165006 | MS.gene27751:CDS |
TTGTTTCTCCAGGTTGGAAA+AGG | 0.426990 | 7.3:-29164880 | MS.gene27751:CDS |
TTACACGAATCCAAAATGAT+TGG | 0.441586 | 7.3:+29165303 | None:intergenic |
AATACAATGAAAGAGTGTTT+GGG | 0.457981 | 7.3:-29165533 | MS.gene27751:CDS |
AGCAATGAGGAAGGTTGATT+GGG | 0.467550 | 7.3:-29165828 | None:intergenic |
CCTGCAACCACATAATCACT+TGG | 0.476124 | 7.3:+29165365 | None:intergenic |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.3:+29165376 | None:intergenic |
TTGTGTGTATACGATAATAT+TGG | 0.477359 | 7.3:+29165636 | None:intergenic |
GGTTGTACCACAATTTCAAT+GGG | 0.477703 | 7.3:-29164733 | MS.gene27751:CDS |
TGAAAGCTAGACGACCCAAT+TGG | 0.478175 | 7.3:+29165336 | None:intergenic |
TAGTTTGGTTCTTGATAAGT+TGG | 0.478359 | 7.3:-29165783 | MS.gene27751:CDS |
AAGGATGGGATAATTGAATA+GGG | 0.479464 | 7.3:+29165561 | None:intergenic |
TTGGTGTAGTGTGTAAGAAT+TGG | 0.484526 | 7.3:-29165736 | MS.gene27751:CDS |
AATCATTGACCGGAGACATA+TGG | 0.484616 | 7.3:-29165070 | MS.gene27751:CDS |
ATCAAGAGGTGGCAGAGTAA+TGG | 0.485102 | 7.3:+29165430 | None:intergenic |
AAAAGGATTCACTAGAGTTA+CGG | 0.487300 | 7.3:+29165469 | None:intergenic |
CATTGTATTGATGGAAGGAT+GGG | 0.492580 | 7.3:+29165547 | None:intergenic |
TCATTGTATTGATGGAAGGA+TGG | 0.495017 | 7.3:+29165546 | None:intergenic |
GTTGCAGGGATTTACCAATT+GGG | 0.498427 | 7.3:-29165350 | MS.gene27751:CDS |
GTTTGGGTTGTAGCCATGGT+TGG | 0.499387 | 7.3:-29165517 | MS.gene27751:CDS |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.3:-29165372 | MS.gene27751:CDS |
AGGAGGATTGTTGATCTTGA+AGG | 0.505220 | 7.3:+29165199 | None:intergenic |
GAGATCTATAATGTGAAGGA+TGG | 0.509549 | 7.3:-29164810 | MS.gene27751:CDS |
TTATCAAGAACCAAACTAAG+AGG | 0.515747 | 7.3:+29165788 | None:intergenic |
TCTTTCATTGTATTGATGGA+AGG | 0.518852 | 7.3:+29165542 | None:intergenic |
CCTTACCACTTTCCTTCGAG+TGG | 0.523216 | 7.3:-29164770 | MS.gene27751:CDS |
GAGTGTTTGGGTTGTAGCCA+TGG | 0.527468 | 7.3:-29165521 | MS.gene27751:CDS |
TCTCACCATCCATATGTCTC+CGG | 0.543961 | 7.3:+29165061 | None:intergenic |
TAATCAGAATGATTTAGGGT+TGG | 0.544184 | 7.3:-29164832 | MS.gene27751:CDS |
TATTTCGTGAAATCATTGAC+CGG | 0.545774 | 7.3:-29165080 | MS.gene27751:CDS |
CAAGTGATTATGTGGTTGCA+GGG | 0.562886 | 7.3:-29165364 | MS.gene27751:CDS |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.3:+29165391 | None:intergenic |
TGCATCCACTCGAAGGAAAG+TGG | 0.571214 | 7.3:+29164765 | None:intergenic |
CCACTCGAAGGAAAGTGGTA+AGG | 0.582043 | 7.3:+29164770 | None:intergenic |
GGTCAATCCCATTGAAATTG+TGG | 0.583167 | 7.3:+29164726 | None:intergenic |
GTTGGAGATCTATAATGTGA+AGG | 0.603732 | 7.3:-29164814 | MS.gene27751:CDS |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.3:+29165378 | None:intergenic |
GTTGATCTTGAAGGATGCAA+CGG | 0.614906 | 7.3:+29165208 | None:intergenic |
TACGATAATATTGGTCTGAG+AGG | 0.624334 | 7.3:+29165645 | None:intergenic |
CCACTAGTGCAAGCCAACCA+TGG | 0.626331 | 7.3:+29165504 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.3:+29165366 | None:intergenic |
TTCCAACCTGGAGAAACAAG+AGG | 0.642260 | 7.3:+29164884 | None:intergenic |
TCTGAGAGGATCATCAACAT+AGG | 0.649847 | 7.3:+29165659 | None:intergenic |
TATACACACAATATCACAGA+CGG | 0.650451 | 7.3:-29165624 | MS.gene27751:CDS |
GAGAGGATCATCAACATAGG+TGG | 0.651968 | 7.3:+29165662 | None:intergenic |
ATGATTTCACGAAATAAGCA+CGG | 0.661141 | 7.3:+29165087 | None:intergenic |
ATGCAGAAATTGAATCACCA+TGG | 0.661152 | 7.3:+29164910 | None:intergenic |
ACCTTATCAAAAGAATCAAG+AGG | 0.667314 | 7.3:+29165416 | None:intergenic |
TTATCAAAAGAATCAAGAGG+TGG | 0.675596 | 7.3:+29165419 | None:intergenic |
TTGCAACTGGATACCCAGAG+TGG | 0.681453 | 7.3:-29164993 | MS.gene27751:CDS |
ATTGACCGGAGACATATGGA+TGG | 0.696827 | 7.3:-29165066 | MS.gene27751:CDS |
GGGTCATTAGAGTCATCACA+AGG | 0.703659 | 7.3:+29165179 | None:intergenic |
CAACCTGGAGAAACAAGAGG+CGG | 0.708209 | 7.3:+29164887 | None:intergenic |
TCATTAGAGTCATCACAAGG+AGG | 0.748745 | 7.3:+29165182 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCATAAAAATCATCAATTT+AGG | - | chr7.3:29164858-29164877 | MS.gene27751:CDS | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | + | chr7.3:29165396-29165415 | None:intergenic | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | + | chr7.3:29165397-29165416 | None:intergenic | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | chr7.3:29165292-29165311 | MS.gene27751:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr7.3:29164862-29164881 | None:intergenic | 20.0% |
!!! | TTGGTTTATTTTGTTTATCA+AGG | - | chr7.3:29165697-29165716 | MS.gene27751:CDS | 20.0% |
! | AAGGTAATCAGAATGATTTA+GGG | - | chr7.3:29165716-29165735 | MS.gene27751:CDS | 25.0% |
! | TTGTGTGTATACGATAATAT+TGG | + | chr7.3:29164919-29164938 | None:intergenic | 25.0% |
!!! | AATACAATGAAAGAGTGTTT+GGG | - | chr7.3:29165019-29165038 | MS.gene27751:CDS | 25.0% |
AAAAGGATTCACTAGAGTTA+CGG | + | chr7.3:29165086-29165105 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | - | chr7.3:29164792-29164811 | MS.gene27751:CDS | 30.0% | |
AAGGATGGGATAATTGAATA+GGG | + | chr7.3:29164994-29165013 | None:intergenic | 30.0% | |
ACACTCTTTCATTGTATTGA+TGG | + | chr7.3:29165017-29165036 | None:intergenic | 30.0% | |
ACCTTATCAAAAGAATCAAG+AGG | + | chr7.3:29165139-29165158 | None:intergenic | 30.0% | |
ATGATTTCACGAAATAAGCA+CGG | + | chr7.3:29165468-29165487 | None:intergenic | 30.0% | |
CAAGGTAATCAGAATGATTT+AGG | - | chr7.3:29165715-29165734 | MS.gene27751:CDS | 30.0% | |
CAGCTATAATAAGATTGTTC+TGG | + | chr7.3:29165445-29165464 | None:intergenic | 30.0% | |
TATACACACAATATCACAGA+CGG | - | chr7.3:29164928-29164947 | MS.gene27751:CDS | 30.0% | |
TATTTCGTGAAATCATTGAC+CGG | - | chr7.3:29165472-29165491 | MS.gene27751:CDS | 30.0% | |
TGGATTCGTGTAAACAATAA+TGG | - | chr7.3:29165259-29165278 | MS.gene27751:CDS | 30.0% | |
TTACACGAATCCAAAATGAT+TGG | + | chr7.3:29165252-29165271 | None:intergenic | 30.0% | |
TTATCAAAAGAATCAAGAGG+TGG | + | chr7.3:29165136-29165155 | None:intergenic | 30.0% | |
TTATCAAGAACCAAACTAAG+AGG | + | chr7.3:29164767-29164786 | None:intergenic | 30.0% | |
! | AAAGACCAAACCAATCATTT+TGG | - | chr7.3:29165239-29165258 | MS.gene27751:CDS | 30.0% |
! | ACCTCTTGATTCTTTTGATA+AGG | - | chr7.3:29165135-29165154 | MS.gene27751:CDS | 30.0% |
! | GATTGTTCTGGATCAATATA+TGG | + | chr7.3:29165433-29165452 | None:intergenic | 30.0% |
! | TAATCAGAATGATTTAGGGT+TGG | - | chr7.3:29165720-29165739 | MS.gene27751:CDS | 30.0% |
! | TCTTTCATTGTATTGATGGA+AGG | + | chr7.3:29165013-29165032 | None:intergenic | 30.0% |
!! | ATTTTATTTGTCGCAAACCA+TGG | - | chr7.3:29165625-29165644 | MS.gene27751:CDS | 30.0% |
!! | CAATACAATGAAAGAGTGTT+TGG | - | chr7.3:29165018-29165037 | MS.gene27751:CDS | 30.0% |
!! | TAGTTTGGTTCTTGATAAGT+TGG | - | chr7.3:29164769-29164788 | MS.gene27751:CDS | 30.0% |
ACATGTTCACAAATTGCAAC+TGG | - | chr7.3:29165546-29165565 | MS.gene27751:CDS | 35.0% | |
AGATGCATATCCTCTTAGTT+TGG | - | chr7.3:29164754-29164773 | MS.gene27751:CDS | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.3:29165179-29165198 | None:intergenic | 35.0% | |
ATGCAGAAATTGAATCACCA+TGG | + | chr7.3:29165645-29165664 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.3:29164797-29164816 | MS.gene27751:CDS | 35.0% | |
GAAGGATGGGATAATTGAAT+AGG | + | chr7.3:29164995-29165014 | None:intergenic | 35.0% | |
GAGATCTATAATGTGAAGGA+TGG | - | chr7.3:29165742-29165761 | MS.gene27751:CDS | 35.0% | |
GATGAACAAACTTGAGAGTT+TGG | - | chr7.3:29165594-29165613 | MS.gene27751:CDS | 35.0% | |
GGTTGTACCACAATTTCAAT+GGG | - | chr7.3:29165819-29165838 | MS.gene27751:CDS | 35.0% | |
GTTGGAGATCTATAATGTGA+AGG | - | chr7.3:29165738-29165757 | MS.gene27751:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.3:29165178-29165197 | None:intergenic | 35.0% | |
TTGGTGTAGTGTGTAAGAAT+TGG | - | chr7.3:29164816-29164835 | MS.gene27751:CDS | 35.0% | |
! | CATTGTATTGATGGAAGGAT+GGG | + | chr7.3:29165008-29165027 | None:intergenic | 35.0% |
! | CGAATCCAAAATGATTGGTT+TGG | + | chr7.3:29165247-29165266 | None:intergenic | 35.0% |
! | TACGATAATATTGGTCTGAG+AGG | + | chr7.3:29164910-29164929 | None:intergenic | 35.0% |
! | TCATTGTATTGATGGAAGGA+TGG | + | chr7.3:29165009-29165028 | None:intergenic | 35.0% |
AAAAAGTTGCATCCACTCGA+AGG | + | chr7.3:29165797-29165816 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.3:29165177-29165196 | None:intergenic | 40.0% | |
AATCATTGACCGGAGACATA+TGG | - | chr7.3:29165482-29165501 | MS.gene27751:CDS | 40.0% | |
AGGAGGATTGTTGATCTTGA+AGG | + | chr7.3:29165356-29165375 | None:intergenic | 40.0% | |
CAAGTGATTATGTGGTTGCA+GGG | - | chr7.3:29165188-29165207 | MS.gene27751:CDS | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.3:29165189-29165208 | None:intergenic | 40.0% | |
GGAGCTATACTGCACTTAAA+AGG | + | chr7.3:29165103-29165122 | None:intergenic | 40.0% | |
GGGTTGTACCACAATTTCAA+TGG | - | chr7.3:29165818-29165837 | MS.gene27751:CDS | 40.0% | |
GTTGATCTTGAAGGATGCAA+CGG | + | chr7.3:29165347-29165366 | None:intergenic | 40.0% | |
GTTGCAGGGATTTACCAATT+GGG | - | chr7.3:29165202-29165221 | MS.gene27751:CDS | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.3:29165180-29165199 | MS.gene27751:CDS | 40.0% | |
TCATTAGAGTCATCACAAGG+AGG | + | chr7.3:29165373-29165392 | None:intergenic | 40.0% | |
TCTGAGAGGATCATCAACAT+AGG | + | chr7.3:29164896-29164915 | None:intergenic | 40.0% | |
! | AACCAAATCCTTTTCCAACC+TGG | + | chr7.3:29165683-29165702 | None:intergenic | 40.0% |
! | TTGTTTCTCCAGGTTGGAAA+AGG | - | chr7.3:29165672-29165691 | MS.gene27751:CDS | 40.0% |
!! | CTGTTCAAGTTTTCCACTCT+GGG | + | chr7.3:29165575-29165594 | None:intergenic | 40.0% |
!! | TCTGTTCAAGTTTTCCACTC+TGG | + | chr7.3:29165576-29165595 | None:intergenic | 40.0% |
!!! | CGAGTGGATGCAACTTTTTT+GGG | - | chr7.3:29165798-29165817 | MS.gene27751:CDS | 40.0% |
!!! | TCGAGTGGATGCAACTTTTT+TGG | - | chr7.3:29165797-29165816 | MS.gene27751:CDS | 40.0% |
ATCAAGAGGTGGCAGAGTAA+TGG | + | chr7.3:29165125-29165144 | None:intergenic | 45.0% | |
ATTGACCGGAGACATATGGA+TGG | - | chr7.3:29165486-29165505 | MS.gene27751:CDS | 45.0% | |
CCAAGTGATTATGTGGTTGC+AGG | - | chr7.3:29165187-29165206 | MS.gene27751:CDS | 45.0% | |
CCTGCAACCACATAATCACT+TGG | + | chr7.3:29165190-29165209 | None:intergenic | 45.0% | |
GAGAGGATCATCAACATAGG+TGG | + | chr7.3:29164893-29164912 | None:intergenic | 45.0% | |
GGGTCATTAGAGTCATCACA+AGG | + | chr7.3:29165376-29165395 | None:intergenic | 45.0% | |
GGTTGCAGGGATTTACCAAT+TGG | - | chr7.3:29165201-29165220 | MS.gene27751:CDS | 45.0% | |
TCAAGAGGTGGCAGAGTAAT+GGG | + | chr7.3:29165124-29165143 | None:intergenic | 45.0% | |
TCTCACCATCCATATGTCTC+CGG | + | chr7.3:29165494-29165513 | None:intergenic | 45.0% | |
TGAAAGCTAGACGACCCAAT+TGG | + | chr7.3:29165219-29165238 | None:intergenic | 45.0% | |
TTCCAACCTGGAGAAACAAG+AGG | + | chr7.3:29165671-29165690 | None:intergenic | 45.0% | |
! | CTCCAGGTTGGAAAAGGATT+TGG | - | chr7.3:29165678-29165697 | MS.gene27751:CDS | 45.0% |
CAACCTGGAGAAACAAGAGG+CGG | + | chr7.3:29165668-29165687 | None:intergenic | 50.0% | |
CCACTCGAAGGAAAGTGGTA+AGG | + | chr7.3:29165785-29165804 | None:intergenic | 50.0% | |
CCTTACCACTTTCCTTCGAG+TGG | - | chr7.3:29165782-29165801 | MS.gene27751:CDS | 50.0% | |
TGCATCCACTCGAAGGAAAG+TGG | + | chr7.3:29165790-29165809 | None:intergenic | 50.0% | |
TTGCAACTGGATACCCAGAG+TGG | - | chr7.3:29165559-29165578 | MS.gene27751:CDS | 50.0% | |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.3:29165164-29165183 | None:intergenic | 50.0% |
!! | GAGTGTTTGGGTTGTAGCCA+TGG | - | chr7.3:29165031-29165050 | MS.gene27751:CDS | 50.0% |
!! | GTTTGGGTTGTAGCCATGGT+TGG | - | chr7.3:29165035-29165054 | MS.gene27751:CDS | 50.0% |
CCACTAGTGCAAGCCAACCA+TGG | + | chr7.3:29165051-29165070 | None:intergenic | 55.0% | |
! | CATCCGCCTCTTGTTTCTCC+AGG | - | chr7.3:29165662-29165681 | MS.gene27751:CDS | 55.0% |
! | CGCCTCTTGTTTCTCCAGGT+TGG | - | chr7.3:29165666-29165685 | MS.gene27751:CDS | 55.0% |
!! | CCATGGTTGGCTTGCACTAG+TGG | - | chr7.3:29165048-29165067 | MS.gene27751:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 29164728 | 29165846 | 29164728 | ID=MS.gene27751 |
chr7.3 | mRNA | 29164728 | 29165846 | 29164728 | ID=MS.gene27751.t1;Parent=MS.gene27751 |
chr7.3 | exon | 29164728 | 29165846 | 29164728 | ID=MS.gene27751.t1.exon1;Parent=MS.gene27751.t1 |
chr7.3 | CDS | 29164728 | 29165846 | 29164728 | ID=cds.MS.gene27751.t1;Parent=MS.gene27751.t1 |
Gene Sequence |
Protein sequence |