Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52166.t1 | RHN46952.1 | 57.7 | 385 | 135 | 8 | 1 | 373 | 1 | 369 | 3.40E-106 | 395.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52166.t1 | G7L4M6 | 57.7 | 385 | 135 | 8 | 1 | 373 | 1 | 369 | 2.4e-106 | 395.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52166.t1 | MTR_7g077620 | 60.104 | 386 | 126 | 8 | 1 | 374 | 1 | 370 | 6.79e-146 | 419 |
| MS.gene52166.t1 | MTR_7g077650 | 57.143 | 392 | 132 | 11 | 1 | 376 | 1 | 372 | 3.18e-135 | 391 |
| MS.gene52166.t1 | MTR_7g077660 | 56.750 | 400 | 117 | 15 | 1 | 376 | 1 | 368 | 1.15e-128 | 374 |
| MS.gene52166.t1 | MTR_7g076100 | 64.113 | 248 | 68 | 5 | 137 | 376 | 66 | 300 | 6.53e-97 | 291 |
| MS.gene52166.t1 | MTR_7g076100 | 82.979 | 47 | 8 | 0 | 1 | 47 | 1 | 47 | 3.48e-19 | 87.4 |
| MS.gene52166.t1 | MTR_7g076110 | 54.045 | 309 | 111 | 10 | 83 | 376 | 21 | 313 | 3.60e-96 | 289 |
| MS.gene52166.t1 | MTR_5g038260 | 40.732 | 410 | 172 | 17 | 6 | 376 | 6 | 383 | 1.25e-78 | 247 |
| MS.gene52166.t1 | MTR_1g108740 | 43.081 | 383 | 167 | 14 | 3 | 374 | 2 | 344 | 7.04e-76 | 238 |
| MS.gene52166.t1 | MTR_5g038230 | 39.152 | 401 | 161 | 15 | 6 | 374 | 4 | 353 | 1.81e-72 | 230 |
| MS.gene52166.t1 | MTR_1g064570 | 39.329 | 417 | 189 | 17 | 5 | 376 | 3 | 400 | 2.75e-65 | 213 |
| MS.gene52166.t1 | MTR_5g082770 | 42.308 | 312 | 135 | 9 | 6 | 299 | 4 | 288 | 1.13e-62 | 202 |
| MS.gene52166.t1 | MTR_7g076130 | 73.387 | 124 | 27 | 3 | 167 | 284 | 25 | 148 | 5.38e-56 | 181 |
| MS.gene52166.t1 | MTR_1g016150 | 49.462 | 186 | 83 | 4 | 3 | 181 | 2 | 183 | 5.01e-48 | 163 |
| MS.gene52166.t1 | MTR_1g016150 | 57.143 | 63 | 20 | 2 | 253 | 312 | 177 | 235 | 2.46e-11 | 63.5 |
| MS.gene52166.t1 | MTR_5g082780 | 38.912 | 239 | 100 | 8 | 110 | 327 | 1 | 214 | 1.24e-37 | 135 |
| MS.gene52166.t1 | MTR_1g108750 | 50.649 | 154 | 42 | 7 | 6 | 158 | 4 | 124 | 2.67e-26 | 102 |
| MS.gene52166.t1 | MTR_3g114970 | 24.225 | 355 | 222 | 12 | 5 | 338 | 3 | 331 | 4.66e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 87 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7.4:+29354247 | None:intergenic |
| AAAGAGCACGCCAACCATTT+TGG | 0.235367 | 7.4:-29354396 | MS.gene52166:CDS |
| GCATGTTGACCCTATGTTTA+TGG | 0.235574 | 7.4:+29354770 | None:intergenic |
| TGTGAAGGATGGAAGCTTTC+GGG | 0.254954 | 7.4:-29353861 | MS.gene52166:CDS |
| CTACAACTACAACACTTAAA+AGG | 0.269156 | 7.4:+29354544 | None:intergenic |
| ATTCCTTTAGAAGATACTTT+TGG | 0.274093 | 7.4:-29353823 | MS.gene52166:CDS |
| AAGTCTTGATGTATATAAAT+TGG | 0.276584 | 7.4:-29354107 | MS.gene52166:CDS |
| AATGAACAAGCTTGAGAGTT+TGG | 0.278023 | 7.4:-29354053 | MS.gene52166:CDS |
| AAGATTACAAAATCCGTAAA+TGG | 0.312492 | 7.4:+29354426 | None:intergenic |
| ATAGAAGTGAGTTTGATTCT+AGG | 0.333522 | 7.4:-29353898 | MS.gene52166:CDS |
| TAATCATTAGGGCTTGTAAT+GGG | 0.360286 | 7.4:+29354460 | None:intergenic |
| AAGAACACATCGATCATGTT+AGG | 0.364419 | 7.4:-29354837 | MS.gene52166:CDS |
| TCACGAGCTATAATCCAAAA+TGG | 0.365846 | 7.4:+29354382 | None:intergenic |
| GTCTGGGCTCTTCATTTGGT+TGG | 0.366330 | 7.4:-29354609 | MS.gene52166:CDS |
| TATGTCGTTGCAGCCATTTA+CGG | 0.367345 | 7.4:-29354439 | MS.gene52166:CDS |
| ACCATTGGTCTTTGAGGATC+AGG | 0.373227 | 7.4:+29354737 | None:intergenic |
| AGGTGTCTGGGCTCTTCATT+TGG | 0.375113 | 7.4:-29354613 | MS.gene52166:CDS |
| AGAAGAGCTACCTCTTAGTT+TGG | 0.376131 | 7.4:-29354875 | MS.gene52166:CDS |
| GCTGCAACGACATAATCATT+AGG | 0.378882 | 7.4:+29354448 | None:intergenic |
| ATGTGAAGGATGGAAGCTTT+CGG | 0.382705 | 7.4:-29353862 | MS.gene52166:CDS |
| TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7.4:+29354248 | None:intergenic |
| GCCATACAAGGATCTCTTCC+CGG | 0.394890 | 7.4:+29354690 | None:intergenic |
| GGGTTCAACCACAATTTCAA+TGG | 0.403923 | 7.4:-29353802 | MS.gene52166:CDS |
| AACCTCTTGTTTCTCCAAGT+TGG | 0.405691 | 7.4:-29353984 | MS.gene52166:CDS |
| TTTGAGAGGTGGCAGACTAA+TGG | 0.407722 | 7.4:+29354513 | None:intergenic |
| TATGGTAAGTGAAAGGTGTC+TGG | 0.415346 | 7.4:-29354626 | MS.gene52166:CDS |
| AAAAGGATTGACTAGAGTTA+TGG | 0.415743 | 7.4:+29354561 | None:intergenic |
| CTGCAACGACATAATCATTA+GGG | 0.419633 | 7.4:+29354449 | None:intergenic |
| AAAGCCTTTCATCGTAGCAT+TGG | 0.428788 | 7.4:+29354194 | None:intergenic |
| AATCGAATCACTTTCCAACT+TGG | 0.429331 | 7.4:+29353970 | None:intergenic |
| TTGAGAGGTGGCAGACTAAT+GGG | 0.429349 | 7.4:+29354514 | None:intergenic |
| ACCAATACCATTGGTCTTTG+AGG | 0.432284 | 7.4:+29354731 | None:intergenic |
| AAGCCTTTCATCGTAGCATT+GGG | 0.439729 | 7.4:+29354195 | None:intergenic |
| TCTTTGAGGATCAGGATCAT+TGG | 0.444334 | 7.4:+29354745 | None:intergenic |
| CACATCGATCATGTTAGGTT+TGG | 0.454086 | 7.4:-29354832 | MS.gene52166:CDS |
| TGATGTATATAAATTGGAAC+TGG | 0.461520 | 7.4:-29354101 | MS.gene52166:CDS |
| AGTGAGTTTGATTCTAGGCT+AGG | 0.464620 | 7.4:-29353893 | MS.gene52166:CDS |
| CAATGACGAAGGTGGCAGAC+TGG | 0.469940 | 7.4:-29354906 | MS.gene52166:CDS |
| TTTGAGATTGATTCTAGGCT+AGG | 0.472790 | 7.4:-29353938 | MS.gene52166:CDS |
| GGTTCAACCACAATTTCAAT+GGG | 0.475405 | 7.4:-29353801 | MS.gene52166:CDS |
| TCCTCAAAGACCAATGGTAT+TGG | 0.480545 | 7.4:-29354732 | MS.gene52166:CDS |
| CAAAGCTTAACCATAAACAT+AGG | 0.485104 | 7.4:-29354780 | MS.gene52166:CDS |
| TTGAGATTGATTCTAGGCTA+GGG | 0.501498 | 7.4:-29353937 | MS.gene52166:CDS |
| AACCCAAAAGTATCTTCTAA+AGG | 0.503588 | 7.4:+29353820 | None:intergenic |
| CAACCCAATGCTACGATGAA+AGG | 0.504295 | 7.4:-29354198 | MS.gene52166:CDS |
| AATCTTTGAATGGAGACATA+TGG | 0.507395 | 7.4:-29354162 | MS.gene52166:CDS |
| ATAATCATTAGGGCTTGTAA+TGG | 0.513412 | 7.4:+29354459 | None:intergenic |
| TTGTCAAGAACCAAACTAAG+AGG | 0.513613 | 7.4:+29354865 | None:intergenic |
| ACCTCTCAAATCTGTTTACA+AGG | 0.516115 | 7.4:-29354500 | MS.gene52166:CDS |
| GACACCTTTCACTTACCATA+CGG | 0.516907 | 7.4:+29354629 | None:intergenic |
| GATCAATCCCATTGAAATTG+TGG | 0.519492 | 7.4:+29353794 | None:intergenic |
| GCGACTTAGAATGCCATACA+AGG | 0.519610 | 7.4:+29354678 | None:intergenic |
| AGGAGGATTGTTGATCTTGA+AGG | 0.522699 | 7.4:+29354288 | None:intergenic |
| TGTAATGGGGTCAGCGGACA+AGG | 0.524243 | 7.4:+29354474 | None:intergenic |
| TAGTTTGGTTCTTGACAAGT+TGG | 0.526962 | 7.4:-29354860 | MS.gene52166:CDS |
| CTTTCATCGTAGCATTGGGT+TGG | 0.532676 | 7.4:+29354199 | None:intergenic |
| TTGGTGTCGTGTGCAAGTCT+TGG | 0.536928 | 7.4:-29354813 | MS.gene52166:CDS |
| GAGCTATAATCCAAAATGGT+TGG | 0.539353 | 7.4:+29354386 | None:intergenic |
| AATGACGAAGGTGGCAGACT+GGG | 0.539805 | 7.4:-29354905 | MS.gene52166:CDS |
| GTGAGTTTGATTCTAGGCTA+GGG | 0.540534 | 7.4:-29353892 | MS.gene52166:CDS |
| CTGATATTTGCTGACAGCCA+TGG | 0.542450 | 7.4:-29354325 | MS.gene52166:CDS |
| GGGATCTATAATGTGAAGGA+TGG | 0.560695 | 7.4:-29353872 | MS.gene52166:CDS |
| ACCGGGAAGAGATCCTTGTA+TGG | 0.564728 | 7.4:-29354691 | MS.gene52166:CDS |
| TTGAGGATCAGGATCATTGG+TGG | 0.568755 | 7.4:+29354748 | None:intergenic |
| ACACCTTTCACTTACCATAC+GGG | 0.569484 | 7.4:+29354630 | None:intergenic |
| TTGGAACTGGATGCCGAGAG+TGG | 0.577039 | 7.4:-29354088 | MS.gene52166:CDS |
| AAAGCTTAACCATAAACATA+GGG | 0.578569 | 7.4:-29354779 | MS.gene52166:CDS |
| ATGGTAAGTGAAAGGTGTCT+GGG | 0.587373 | 7.4:-29354625 | MS.gene52166:CDS |
| TATCCCGTATGGTAAGTGAA+AGG | 0.591101 | 7.4:-29354633 | MS.gene52166:CDS |
| TTGTAAACAGATTTGAGAGG+TGG | 0.604090 | 7.4:+29354502 | None:intergenic |
| ACTCATGAGACCAATACCAT+TGG | 0.610733 | 7.4:+29354722 | None:intergenic |
| GCTAGGGATCTATAATGTGA+AGG | 0.612222 | 7.4:-29353876 | MS.gene52166:CDS |
| GCTAGGGATCTATAATGTGA+AGG | 0.614662 | 7.4:-29353921 | MS.gene52166:CDS |
| AGGATACAATGGTGTGTCCA+TGG | 0.616988 | 7.4:+29354308 | None:intergenic |
| AATCATTAGGGCTTGTAATG+GGG | 0.620431 | 7.4:+29354461 | None:intergenic |
| TCCTGATCCTCAAAGACCAA+TGG | 0.626117 | 7.4:-29354738 | MS.gene52166:CDS |
| TTCCAACTTGGAGAAACAAG+AGG | 0.627586 | 7.4:+29353982 | None:intergenic |
| CTTAGGCTTGGCAATGACGA+AGG | 0.631068 | 7.4:-29354917 | None:intergenic |
| GGGTCATATGAGTCATCGCA+AGG | 0.632363 | 7.4:+29354268 | None:intergenic |
| GTTGATCTTGAAGGATACAA+TGG | 0.633785 | 7.4:+29354297 | None:intergenic |
| AGGCTTGGCAATGACGAAGG+TGG | 0.649782 | 7.4:-29354914 | None:intergenic |
| AGGGCTTGTAATGGGGTCAG+CGG | 0.661148 | 7.4:+29354468 | None:intergenic |
| AAGTATCTTCTAAAGGAATG+CGG | 0.678372 | 7.4:+29353827 | None:intergenic |
| TTTGAATGGAGACATATGGA+TGG | 0.693585 | 7.4:-29354158 | MS.gene52166:CDS |
| GCCTTGTAAACAGATTTGAG+AGG | 0.700590 | 7.4:+29354499 | None:intergenic |
| AGAGGTGGCAGACTAATGGG+AGG | 0.724272 | 7.4:+29354517 | None:intergenic |
| TCATATGAGTCATCGCAAGG+AGG | 0.728268 | 7.4:+29354271 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTCTTGATGTATATAAAT+TGG | - | chr7.4:29354593-29354612 | MS.gene52166:CDS | 20.0% |
| !! | TCTCATAGTAAGTAAAATTA+GGG | + | chr7.4:29354455-29354474 | None:intergenic | 20.0% |
| !! | TTCTCATAGTAAGTAAAATT+AGG | + | chr7.4:29354456-29354475 | None:intergenic | 20.0% |
| !!! | AACATTTTATTTGTTGGAAT+CGG | - | chr7.4:29354675-29354694 | MS.gene52166:CDS | 20.0% |
| !!! | ACTAGTGTTGTATTTTATAA+AGG | - | chr7.4:29354351-29354370 | MS.gene52166:CDS | 20.0% |
| !!! | TATTTTGTGAAATCTTTGAA+TGG | - | chr7.4:29354528-29354547 | MS.gene52166:CDS | 20.0% |
| ! | AAAGCTTAACCATAAACATA+GGG | - | chr7.4:29353921-29353940 | MS.gene52166:CDS | 25.0% |
| ! | AAGATTACAAAATCCGTAAA+TGG | + | chr7.4:29354277-29354296 | None:intergenic | 25.0% |
| ! | TGATGTATATAAATTGGAAC+TGG | - | chr7.4:29354599-29354618 | MS.gene52166:CDS | 25.0% |
| !!! | ACATTTTATTTGTTGGAATC+GGG | - | chr7.4:29354676-29354695 | MS.gene52166:CDS | 25.0% |
| !!! | ATTCCTTTAGAAGATACTTT+TGG | - | chr7.4:29354877-29354896 | MS.gene52166:CDS | 25.0% |
| !!! | GAAGACAACATTTTATTTGT+TGG | - | chr7.4:29354669-29354688 | MS.gene52166:CDS | 25.0% |
| !!! | TTCCTTTAGAAGATACTTTT+GGG | - | chr7.4:29354878-29354897 | MS.gene52166:CDS | 25.0% |
| !!! | TTCTTTTTGAGATTGATTCT+AGG | - | chr7.4:29354757-29354776 | MS.gene52166:CDS | 25.0% |
| AAAAGGATTGACTAGAGTTA+TGG | + | chr7.4:29354142-29354161 | None:intergenic | 30.0% | |
| AATCTTTGAATGGAGACATA+TGG | - | chr7.4:29354538-29354557 | MS.gene52166:CDS | 30.0% | |
| ATAATCATTAGGGCTTGTAA+TGG | + | chr7.4:29354244-29354263 | None:intergenic | 30.0% | |
| ATACGGGATAAAAATGTAAC+AGG | + | chr7.4:29354057-29354076 | None:intergenic | 30.0% | |
| ATAGAAGTGAGTTTGATTCT+AGG | - | chr7.4:29354802-29354821 | MS.gene52166:CDS | 30.0% | |
| CAAAGCTTAACCATAAACAT+AGG | - | chr7.4:29353920-29353939 | MS.gene52166:CDS | 30.0% | |
| CTACAACTACAACACTTAAA+AGG | + | chr7.4:29354159-29354178 | None:intergenic | 30.0% | |
| TAATCATTAGGGCTTGTAAT+GGG | + | chr7.4:29354243-29354262 | None:intergenic | 30.0% | |
| TACGGGATAAAAATGTAACA+GGG | + | chr7.4:29354056-29354075 | None:intergenic | 30.0% | |
| ! | AAGTATCTTCTAAAGGAATG+CGG | + | chr7.4:29354876-29354895 | None:intergenic | 30.0% |
| ! | TGTTACATTTTTATCCCGTA+TGG | - | chr7.4:29354056-29354075 | MS.gene52166:CDS | 30.0% |
| !! | AACCCAAAAGTATCTTCTAA+AGG | + | chr7.4:29354883-29354902 | None:intergenic | 30.0% |
| !! | CATTTTATTTGTTGGAATCG+GGG | - | chr7.4:29354677-29354696 | MS.gene52166:CDS | 30.0% |
| !!! | ATTTGGTTGGTTTTCATTTG+TGG | - | chr7.4:29354104-29354123 | MS.gene52166:CDS | 30.0% |
| AAGAACACATCGATCATGTT+AGG | - | chr7.4:29353863-29353882 | MS.gene52166:CDS | 35.0% | |
| AATCATTAGGGCTTGTAATG+GGG | + | chr7.4:29354242-29354261 | None:intergenic | 35.0% | |
| AATCGAATCACTTTCCAACT+TGG | + | chr7.4:29354733-29354752 | None:intergenic | 35.0% | |
| AATGAACAAGCTTGAGAGTT+TGG | - | chr7.4:29354647-29354666 | MS.gene52166:CDS | 35.0% | |
| ACCTCTCAAATCTGTTTACA+AGG | - | chr7.4:29354200-29354219 | MS.gene52166:CDS | 35.0% | |
| CTGCAACGACATAATCATTA+GGG | + | chr7.4:29354254-29354273 | None:intergenic | 35.0% | |
| GAGCTATAATCCAAAATGGT+TGG | + | chr7.4:29354317-29354336 | None:intergenic | 35.0% | |
| GGTTCAACCACAATTTCAAT+GGG | - | chr7.4:29354899-29354918 | MS.gene52166:CDS | 35.0% | |
| GTTGATCTTGAAGGATACAA+TGG | + | chr7.4:29354406-29354425 | None:intergenic | 35.0% | |
| TCACGAGCTATAATCCAAAA+TGG | + | chr7.4:29354321-29354340 | None:intergenic | 35.0% | |
| TCTCATGAGTATGCAAAAAC+CGG | - | chr7.4:29353991-29354010 | MS.gene52166:CDS | 35.0% | |
| TTGTAAACAGATTTGAGAGG+TGG | + | chr7.4:29354201-29354220 | None:intergenic | 35.0% | |
| TTGTCAAGAACCAAACTAAG+AGG | + | chr7.4:29353838-29353857 | None:intergenic | 35.0% | |
| TTTGAATGGAGACATATGGA+TGG | - | chr7.4:29354542-29354561 | MS.gene52166:CDS | 35.0% | |
| ! | TTGAGATTGATTCTAGGCTA+GGG | - | chr7.4:29354763-29354782 | MS.gene52166:CDS | 35.0% |
| ! | TTTGAGATTGATTCTAGGCT+AGG | - | chr7.4:29354762-29354781 | MS.gene52166:CDS | 35.0% |
| !! | TAGTTTGGTTCTTGACAAGT+TGG | - | chr7.4:29353840-29353859 | MS.gene52166:CDS | 35.0% |
| !! | TTGTTCAAGTTTTCCACTCT+CGG | + | chr7.4:29354628-29354647 | None:intergenic | 35.0% |
| AAAGCCTTTCATCGTAGCAT+TGG | + | chr7.4:29354509-29354528 | None:intergenic | 40.0% | |
| AAGCCTTTCATCGTAGCATT+GGG | + | chr7.4:29354508-29354527 | None:intergenic | 40.0% | |
| ACACCTTTCACTTACCATAC+GGG | + | chr7.4:29354073-29354092 | None:intergenic | 40.0% | |
| ACTCATGAGACCAATACCAT+TGG | + | chr7.4:29353981-29354000 | None:intergenic | 40.0% | |
| AGAAGAGCTACCTCTTAGTT+TGG | - | chr7.4:29353825-29353844 | MS.gene52166:CDS | 40.0% | |
| AGGAGGATTGTTGATCTTGA+AGG | + | chr7.4:29354415-29354434 | None:intergenic | 40.0% | |
| AGTGAGTTTGATTCTAGGCT+AGG | - | chr7.4:29354807-29354826 | MS.gene52166:CDS | 40.0% | |
| ATGTGAAGGATGGAAGCTTT+CGG | - | chr7.4:29354838-29354857 | MS.gene52166:CDS | 40.0% | |
| CACATCGATCATGTTAGGTT+TGG | - | chr7.4:29353868-29353887 | MS.gene52166:CDS | 40.0% | |
| CTCATGAGTATGCAAAAACC+GGG | - | chr7.4:29353992-29354011 | MS.gene52166:CDS | 40.0% | |
| GACACCTTTCACTTACCATA+CGG | + | chr7.4:29354074-29354093 | None:intergenic | 40.0% | |
| GCATGTTGACCCTATGTTTA+TGG | + | chr7.4:29353933-29353952 | None:intergenic | 40.0% | |
| GCCTTGTAAACAGATTTGAG+AGG | + | chr7.4:29354204-29354223 | None:intergenic | 40.0% | |
| GCTAGGGATCTATAATGTGA+AGG | - | chr7.4:29354779-29354798 | MS.gene52166:CDS | 40.0% | |
| GCTGCAACGACATAATCATT+AGG | + | chr7.4:29354255-29354274 | None:intergenic | 40.0% | |
| GGGATCTATAATGTGAAGGA+TGG | - | chr7.4:29354783-29354802 | MS.gene52166:CDS | 40.0% | |
| GGGTTCAACCACAATTTCAA+TGG | - | chr7.4:29354898-29354917 | MS.gene52166:CDS | 40.0% | |
| GTGAGTTTGATTCTAGGCTA+GGG | - | chr7.4:29354808-29354827 | MS.gene52166:CDS | 40.0% | |
| TATCCCGTATGGTAAGTGAA+AGG | - | chr7.4:29354067-29354086 | MS.gene52166:CDS | 40.0% | |
| TATGTCGTTGCAGCCATTTA+CGG | - | chr7.4:29354261-29354280 | MS.gene52166:CDS | 40.0% | |
| TCCTCAAAGACCAATGGTAT+TGG | - | chr7.4:29353968-29353987 | MS.gene52166:CDS | 40.0% | |
| TTCCAACTTGGAGAAACAAG+AGG | + | chr7.4:29354721-29354740 | None:intergenic | 40.0% | |
| ! | AACCTCTTGTTTCTCCAAGT+TGG | - | chr7.4:29354716-29354735 | MS.gene52166:CDS | 40.0% |
| ! | TCTTTGAGGATCAGGATCAT+TGG | + | chr7.4:29353958-29353977 | None:intergenic | 40.0% |
| !! | ACCAATACCATTGGTCTTTG+AGG | + | chr7.4:29353972-29353991 | None:intergenic | 40.0% |
| !! | ATGGTAAGTGAAAGGTGTCT+GGG | - | chr7.4:29354075-29354094 | MS.gene52166:CDS | 40.0% |
| !! | TATGGTAAGTGAAAGGTGTC+TGG | - | chr7.4:29354074-29354093 | MS.gene52166:CDS | 40.0% |
| AGGATACAATGGTGTGTCCA+TGG | + | chr7.4:29354395-29354414 | None:intergenic | 45.0% | |
| CAACCCAATGCTACGATGAA+AGG | - | chr7.4:29354502-29354521 | MS.gene52166:CDS | 45.0% | |
| GCGACTTAGAATGCCATACA+AGG | + | chr7.4:29354025-29354044 | None:intergenic | 45.0% | |
| TCATATGAGTCATCGCAAGG+AGG | + | chr7.4:29354432-29354451 | None:intergenic | 45.0% | |
| TCCTGATCCTCAAAGACCAA+TGG | - | chr7.4:29353962-29353981 | MS.gene52166:CDS | 45.0% | |
| TGTGAAGGATGGAAGCTTTC+GGG | - | chr7.4:29354839-29354858 | MS.gene52166:CDS | 45.0% | |
| TTGAGAGGTGGCAGACTAAT+GGG | + | chr7.4:29354189-29354208 | None:intergenic | 45.0% | |
| TTGAGGATCAGGATCATTGG+TGG | + | chr7.4:29353955-29353974 | None:intergenic | 45.0% | |
| TTTGAGAGGTGGCAGACTAA+TGG | + | chr7.4:29354190-29354209 | None:intergenic | 45.0% | |
| ! | CTGATATTTGCTGACAGCCA+TGG | - | chr7.4:29354375-29354394 | MS.gene52166:CDS | 45.0% |
| ! | CTTTCATCGTAGCATTGGGT+TGG | + | chr7.4:29354504-29354523 | None:intergenic | 45.0% |
| !! | AAAGAGCACGCCAACCATTT+TGG | - | chr7.4:29354304-29354323 | MS.gene52166:CDS | 45.0% |
| !! | ACCATTGGTCTTTGAGGATC+AGG | + | chr7.4:29353966-29353985 | None:intergenic | 45.0% |
| ACCGGGAAGAGATCCTTGTA+TGG | - | chr7.4:29354009-29354028 | MS.gene52166:CDS | 50.0% | |
| AGGTGTCTGGGCTCTTCATT+TGG | - | chr7.4:29354087-29354106 | MS.gene52166:CDS | 50.0% | |
| GCCATACAAGGATCTCTTCC+CGG | + | chr7.4:29354013-29354032 | None:intergenic | 50.0% | |
| GGGTCATATGAGTCATCGCA+AGG | + | chr7.4:29354435-29354454 | None:intergenic | 50.0% | |
| GTCTGGGCTCTTCATTTGGT+TGG | - | chr7.4:29354091-29354110 | MS.gene52166:CDS | 50.0% | |
| !! | TTGGTGTCGTGTGCAAGTCT+TGG | - | chr7.4:29353887-29353906 | MS.gene52166:CDS | 50.0% |
| AGAGGTGGCAGACTAATGGG+AGG | + | chr7.4:29354186-29354205 | None:intergenic | 55.0% | |
| TTGGAACTGGATGCCGAGAG+TGG | - | chr7.4:29354612-29354631 | MS.gene52166:CDS | 55.0% | |
| ! | AGGGCTTGTAATGGGGTCAG+CGG | + | chr7.4:29354235-29354254 | None:intergenic | 55.0% |
| ! | TGTAATGGGGTCAGCGGACA+AGG | + | chr7.4:29354229-29354248 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 29353796 | 29354926 | 29353796 | ID=MS.gene52166 |
| chr7.4 | mRNA | 29353796 | 29354926 | 29353796 | ID=MS.gene52166.t1;Parent=MS.gene52166 |
| chr7.4 | exon | 29353796 | 29354926 | 29353796 | ID=MS.gene52166.t1.exon1;Parent=MS.gene52166.t1 |
| chr7.4 | CDS | 29353796 | 29354926 | 29353796 | ID=cds.MS.gene52166.t1;Parent=MS.gene52166.t1 |
| Gene Sequence |
| Protein sequence |
