Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27637.t1 | RHN46952.1 | 63 | 373 | 128 | 8 | 1 | 367 | 1 | 369 | 7.90E-116 | 427.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27637.t1 | G7L4M6 | 63.0 | 373 | 128 | 8 | 1 | 367 | 1 | 369 | 5.7e-116 | 427.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27637.t1 | MTR_7g077620 | 63.102 | 374 | 126 | 9 | 1 | 367 | 1 | 369 | 1.78e-150 | 430 |
MS.gene27637.t1 | MTR_7g077650 | 58.549 | 386 | 130 | 13 | 1 | 370 | 1 | 372 | 3.75e-137 | 395 |
MS.gene27637.t1 | MTR_7g077660 | 59.467 | 375 | 133 | 11 | 5 | 370 | 4 | 368 | 7.23e-134 | 387 |
MS.gene27637.t1 | MTR_7g076100 | 69.957 | 233 | 65 | 4 | 141 | 370 | 70 | 300 | 2.78e-103 | 306 |
MS.gene27637.t1 | MTR_7g076100 | 79.630 | 54 | 11 | 0 | 1 | 54 | 1 | 54 | 2.82e-22 | 95.9 |
MS.gene27637.t1 | MTR_7g076110 | 56.949 | 295 | 116 | 5 | 85 | 370 | 21 | 313 | 1.76e-102 | 305 |
MS.gene27637.t1 | MTR_1g108740 | 42.480 | 379 | 169 | 14 | 3 | 368 | 2 | 344 | 4.52e-77 | 241 |
MS.gene27637.t1 | MTR_5g038260 | 41.414 | 396 | 183 | 18 | 6 | 370 | 6 | 383 | 8.25e-74 | 234 |
MS.gene27637.t1 | MTR_5g038230 | 39.949 | 393 | 163 | 17 | 6 | 368 | 4 | 353 | 2.32e-67 | 216 |
MS.gene27637.t1 | MTR_5g082770 | 43.831 | 308 | 139 | 9 | 6 | 302 | 4 | 288 | 2.72e-64 | 206 |
MS.gene27637.t1 | MTR_1g064570 | 36.277 | 419 | 193 | 14 | 5 | 370 | 3 | 400 | 5.54e-62 | 204 |
MS.gene27637.t1 | MTR_7g076130 | 76.613 | 124 | 26 | 2 | 167 | 287 | 25 | 148 | 1.93e-60 | 192 |
MS.gene27637.t1 | MTR_1g016150 | 47.317 | 205 | 99 | 5 | 3 | 201 | 2 | 203 | 2.04e-48 | 164 |
MS.gene27637.t1 | MTR_1g016150 | 58.462 | 65 | 21 | 2 | 252 | 316 | 177 | 235 | 1.50e-11 | 64.3 |
MS.gene27637.t1 | MTR_5g082780 | 40.948 | 232 | 95 | 10 | 112 | 325 | 1 | 208 | 3.15e-41 | 145 |
MS.gene27637.t1 | MTR_1g108750 | 45.455 | 154 | 50 | 5 | 6 | 158 | 4 | 124 | 8.46e-26 | 100 |
MS.gene27637.t1 | MTR_3g114970 | 23.181 | 371 | 204 | 16 | 5 | 337 | 3 | 330 | 5.78e-13 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 71 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATCATTTGGACTTGTAAT+TGG | 0.148563 | 7.2:+29682632 | None:intergenic |
TTCGCATAGTAAGTAAAATT+AGG | 0.191950 | 7.2:+29682422 | None:intergenic |
AAAGAGCAAGCCAACCATTT+TGG | 0.203122 | 7.2:-29682568 | MS.gene27637:CDS |
ACCATCAAAACAATCAATTT+AGG | 0.232527 | 7.2:-29682943 | MS.gene27637:CDS |
GATATACTACTACACTTAAA+AGG | 0.276632 | 7.2:+29682710 | None:intergenic |
AATGAACAAGCTTGAGAGTT+TGG | 0.278023 | 7.2:-29682216 | MS.gene27637:CDS |
ATTTGGTTGGTTTGCATTAG+TGG | 0.297529 | 7.2:-29682762 | MS.gene27637:CDS |
AAGATCACCAATGTTGTAAA+TGG | 0.306746 | 7.2:+29682598 | None:intergenic |
TAGTTTGGTTCTTGACAAAT+TGG | 0.317439 | 7.2:-29683032 | MS.gene27637:CDS |
TTTCCCGTATGAAAATTATA+AGG | 0.318336 | 7.2:-29682799 | MS.gene27637:CDS |
CTTTGTGACTTATGCTATAC+AGG | 0.330550 | 7.2:+29682840 | None:intergenic |
GTTGAGATGTGGCAGAATAA+TGG | 0.333023 | 7.2:+29682685 | None:intergenic |
AGAAGAACTGCCTCTTAGTT+TGG | 0.335492 | 7.2:-29683047 | MS.gene27637:CDS |
TCGCATAGTAAGTAAAATTA+GGG | 0.335896 | 7.2:+29682423 | None:intergenic |
AAGATCACATAGAGCATGTT+AGG | 0.337175 | 7.2:-29683009 | MS.gene27637:CDS |
TTGAGATGTGGCAGAATAAT+GGG | 0.362137 | 7.2:+29682686 | None:intergenic |
GTTGAACTTGAAGGATATAA+TGG | 0.375803 | 7.2:+29682466 | None:intergenic |
TGAGAAGATATTTCATCAAT+TGG | 0.385439 | 7.2:-29682310 | MS.gene27637:CDS |
AAATTAGGGTTATTTGAGTT+AGG | 0.386206 | 7.2:+29682437 | None:intergenic |
CGCATCCCCTTGAAGGAAAT+CGG | 0.389019 | 7.2:+29682023 | None:intergenic |
AATCATTTGGACTTGTAATT+GGG | 0.394312 | 7.2:+29682633 | None:intergenic |
AAAACCTCGCATCCCCTTGA+AGG | 0.402319 | 7.2:+29682016 | None:intergenic |
GGGTTCGACCGCAATTTCAA+TGG | 0.414532 | 7.2:-29681992 | MS.gene27637:CDS |
AAAAGGATTGACTAGAGTTA+TGG | 0.415743 | 7.2:+29682727 | None:intergenic |
TATGAAAATTATAAGGTGTA+TGG | 0.418200 | 7.2:-29682792 | MS.gene27637:CDS |
CACATAGAGCATGTTAGGTT+TGG | 0.419463 | 7.2:-29683004 | MS.gene27637:CDS |
AGGTGTATGGACTCTTCATT+TGG | 0.419747 | 7.2:-29682779 | MS.gene27637:CDS |
GTAGACATCAAGTTTATATG+AGG | 0.436334 | 7.2:+29682277 | None:intergenic |
GTATGGACTCTTCATTTGGT+TGG | 0.436531 | 7.2:-29682775 | MS.gene27637:CDS |
TGATGTCTACAAATTAGAAC+TGG | 0.443705 | 7.2:-29682264 | MS.gene27637:CDS |
TGTGCTATATGAATCCAAAA+TGG | 0.443882 | 7.2:+29682554 | None:intergenic |
GCTGCAATGACATAATCATT+TGG | 0.444853 | 7.2:+29682620 | None:intergenic |
ACCAATACCATTCGTCTTCG+AGG | 0.449702 | 7.2:+29682894 | None:intergenic |
TCCTCGAAGACGAATGGTAT+TGG | 0.465751 | 7.2:-29682895 | MS.gene27637:CDS |
GTCTTCGAGGATCATGATCA+TGG | 0.468105 | 7.2:+29682907 | None:intergenic |
CAATGAGGAAGGTGGCAGAC+TGG | 0.474514 | 7.2:-29683078 | MS.gene27637:CDS |
GGTTCGACCGCAATTTCAAT+GGG | 0.479149 | 7.2:-29681991 | MS.gene27637:CDS |
AGGAGGATTGTTGAACTTGA+AGG | 0.483112 | 7.2:+29682457 | None:intergenic |
TTGGTGTCGTGTGCAAGAAT+TGG | 0.497007 | 7.2:-29682985 | MS.gene27637:CDS |
AATCATTGAATGGAGACATA+TGG | 0.507395 | 7.2:-29682337 | MS.gene27637:CDS |
TTGTCAAGAACCAAACTAAG+AGG | 0.512788 | 7.2:+29683037 | None:intergenic |
ATTTATGACCATGGTATGCA+TGG | 0.513250 | 7.2:-29682101 | MS.gene27637:CDS |
AATGAGGAAGGTGGCAGACT+GGG | 0.522188 | 7.2:-29683077 | MS.gene27637:CDS |
ATATAATGGTGTGTCCTTCA+CGG | 0.524661 | 7.2:+29682480 | None:intergenic |
ATTGCAGCCATTTACAACAT+TGG | 0.532590 | 7.2:-29682605 | MS.gene27637:CDS |
GCAGACAAGGTAACCTTGTA+GGG | 0.532760 | 7.2:+29682659 | None:intergenic |
TTAGGGTTATTTGAGTTAGG+AGG | 0.546912 | 7.2:+29682440 | None:intergenic |
AGCAGACAAGGTAACCTTGT+AGG | 0.548503 | 7.2:+29682658 | None:intergenic |
ACATCTCAACTCTCCCTACA+AGG | 0.555243 | 7.2:-29682672 | MS.gene27637:CDS |
CTCAGGCTTGGCAATGAGGA+AGG | 0.555628 | 7.2:-29683089 | None:intergenic |
GAGATCTATAATGCGAAGGA+TGG | 0.563178 | 7.2:-29682068 | MS.gene27637:CDS |
TTCTAACTTGGAGAAACGAG+AGG | 0.573200 | 7.2:+29682142 | None:intergenic |
TTGCTATTTGCCGACCGTGA+AGG | 0.573377 | 7.2:-29682494 | MS.gene27637:CDS |
TGTAATTGGGTCAGCAGACA+AGG | 0.582291 | 7.2:+29682646 | None:intergenic |
TCTTCGAGGATCATGATCAT+GGG | 0.595038 | 7.2:+29682908 | None:intergenic |
TATCAATCCCATTGAAATTG+CGG | 0.600714 | 7.2:+29681984 | None:intergenic |
ATTTCCTTCAAGGGGATGCG+AGG | 0.607717 | 7.2:-29682020 | MS.gene27637:CDS |
CTATATGAATCCAAAATGGT+TGG | 0.609689 | 7.2:+29682558 | None:intergenic |
TCGAGGATCATGATCATGGG+TGG | 0.616682 | 7.2:+29682911 | None:intergenic |
GTTAGAGATCTATAATGCGA+AGG | 0.619212 | 7.2:-29682072 | MS.gene27637:CDS |
AATGGTGTGTCCTTCACGGT+CGG | 0.620738 | 7.2:+29682484 | None:intergenic |
TCATGATCCTCGAAGACGAA+TGG | 0.621729 | 7.2:-29682901 | MS.gene27637:CDS |
GTGCAAGAATTGGCAATCAG+TGG | 0.629037 | 7.2:-29682975 | MS.gene27637:CDS |
TTTGTGACTTATGCTATACA+GGG | 0.646384 | 7.2:+29682841 | None:intergenic |
ACTCTAAACCATGCATACCA+TGG | 0.661226 | 7.2:+29682093 | None:intergenic |
AGGCTTGGCAATGAGGAAGG+TGG | 0.663381 | 7.2:-29683086 | None:intergenic |
TTGTAGGGAGAGTTGAGATG+TGG | 0.664401 | 7.2:+29682674 | None:intergenic |
ATGCGAAGATAGCTAGCACA+AGG | 0.689632 | 7.2:-29682406 | MS.gene27637:CDS |
ATTGAATGGAGACATATGGA+TGG | 0.693585 | 7.2:-29682333 | MS.gene27637:CDS |
TTAGAACTGGATGCCCAGAG+TGG | 0.702949 | 7.2:-29682251 | MS.gene27637:CDS |
ACACAGAAACTGAATCACCA+TGG | 0.719525 | 7.2:+29682168 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATGTTGTATTTTATAA+AGG | - | chr7.2:29682544-29682563 | MS.gene27637:CDS | 10.0% |
!!! | ATTTATTTTATTTATGACCA+TGG | - | chr7.2:29682952-29682971 | MS.gene27637:CDS | 15.0% |
!! | TATGAAAATTATAAGGTGTA+TGG | - | chr7.2:29682270-29682289 | MS.gene27637:CDS | 20.0% |
!!! | AAATCTTTTCATAATAGCAT+TGG | + | chr7.2:29682696-29682715 | None:intergenic | 20.0% |
!!! | AATCTTTTCATAATAGCATT+GGG | + | chr7.2:29682695-29682714 | None:intergenic | 20.0% |
!!! | TACACCTTATAATTTTCATA+CGG | + | chr7.2:29682270-29682289 | None:intergenic | 20.0% |
!!! | TATTTTGTGAAATCATTGAA+TGG | - | chr7.2:29682715-29682734 | MS.gene27637:CDS | 20.0% |
! | AATCATTTGGACTTGTAATT+GGG | + | chr7.2:29682432-29682451 | None:intergenic | 25.0% |
! | ACCATCAAAACAATCAATTT+AGG | - | chr7.2:29682119-29682138 | MS.gene27637:CDS | 25.0% |
! | GATATACTACTACACTTAAA+AGG | + | chr7.2:29682355-29682374 | None:intergenic | 25.0% |
! | TAATCATTTGGACTTGTAAT+TGG | + | chr7.2:29682433-29682452 | None:intergenic | 25.0% |
! | TCGCATAGTAAGTAAAATTA+GGG | + | chr7.2:29682642-29682661 | None:intergenic | 25.0% |
! | TGAGAAGATATTTCATCAAT+TGG | - | chr7.2:29682752-29682771 | MS.gene27637:CDS | 25.0% |
! | TTCGCATAGTAAGTAAAATT+AGG | + | chr7.2:29682643-29682662 | None:intergenic | 25.0% |
! | TTTCCCGTATGAAAATTATA+AGG | - | chr7.2:29682263-29682282 | MS.gene27637:CDS | 25.0% |
!! | AAATTAGGGTTATTTGAGTT+AGG | + | chr7.2:29682628-29682647 | None:intergenic | 25.0% |
!! | AATCGAATCTTTTTCTAACT+TGG | + | chr7.2:29682935-29682954 | None:intergenic | 25.0% |
!! | ACACCTTATAATTTTCATAC+GGG | + | chr7.2:29682269-29682288 | None:intergenic | 25.0% |
!!! | GAAGACAACATTTTATTTGT+CGG | - | chr7.2:29682868-29682887 | MS.gene27637:CDS | 25.0% |
!!! | TCCTAAATTGATTGTTTTGA+TGG | + | chr7.2:29682123-29682142 | None:intergenic | 25.0% |
AAAAGGATTGACTAGAGTTA+TGG | + | chr7.2:29682338-29682357 | None:intergenic | 30.0% | |
AAGATCACCAATGTTGTAAA+TGG | + | chr7.2:29682467-29682486 | None:intergenic | 30.0% | |
AATCATTGAATGGAGACATA+TGG | - | chr7.2:29682725-29682744 | MS.gene27637:CDS | 30.0% | |
ATACGGGAAAAAAATGTAAC+AGG | + | chr7.2:29682253-29682272 | None:intergenic | 30.0% | |
CTATATGAATCCAAAATGGT+TGG | + | chr7.2:29682507-29682526 | None:intergenic | 30.0% | |
GTAGACATCAAGTTTATATG+AGG | + | chr7.2:29682788-29682807 | None:intergenic | 30.0% | |
GTTGAACTTGAAGGATATAA+TGG | + | chr7.2:29682599-29682618 | None:intergenic | 30.0% | |
TACGGGAAAAAAATGTAACA+GGG | + | chr7.2:29682252-29682271 | None:intergenic | 30.0% | |
TGATGTCTACAAATTAGAAC+TGG | - | chr7.2:29682798-29682817 | MS.gene27637:CDS | 30.0% | |
TGTGCTATATGAATCCAAAA+TGG | + | chr7.2:29682511-29682530 | None:intergenic | 30.0% | |
TTTGTGACTTATGCTATACA+GGG | + | chr7.2:29682224-29682243 | None:intergenic | 30.0% | |
!! | ATTTTATTTGTCGGAAACCA+TGG | - | chr7.2:29682877-29682896 | MS.gene27637:CDS | 30.0% |
!! | TAGTTTGGTTCTTGACAAAT+TGG | - | chr7.2:29682030-29682049 | MS.gene27637:CDS | 30.0% |
!! | TTTTCATAATAGCATTGGGA+TGG | + | chr7.2:29682691-29682710 | None:intergenic | 30.0% |
!!! | ATTTTTACCGATTTCCTTCA+AGG | - | chr7.2:29683032-29683051 | MS.gene27637:CDS | 30.0% |
!!! | TTTTTACCGATTTCCTTCAA+GGG | - | chr7.2:29683033-29683052 | MS.gene27637:CDS | 30.0% |
AAGATCACATAGAGCATGTT+AGG | - | chr7.2:29682053-29682072 | MS.gene27637:CDS | 35.0% | |
AATGAACAAGCTTGAGAGTT+TGG | - | chr7.2:29682846-29682865 | MS.gene27637:CDS | 35.0% | |
ATATAATGGTGTGTCCTTCA+CGG | + | chr7.2:29682585-29682604 | None:intergenic | 35.0% | |
ATTGAATGGAGACATATGGA+TGG | - | chr7.2:29682729-29682748 | MS.gene27637:CDS | 35.0% | |
ATTGCAGCCATTTACAACAT+TGG | - | chr7.2:29682457-29682476 | MS.gene27637:CDS | 35.0% | |
ATTTATGACCATGGTATGCA+TGG | - | chr7.2:29682961-29682980 | MS.gene27637:CDS | 35.0% | |
CTTTGTGACTTATGCTATAC+AGG | + | chr7.2:29682225-29682244 | None:intergenic | 35.0% | |
GCTGCAATGACATAATCATT+TGG | + | chr7.2:29682445-29682464 | None:intergenic | 35.0% | |
GTTAGAGATCTATAATGCGA+AGG | - | chr7.2:29682990-29683009 | MS.gene27637:CDS | 35.0% | |
TTGAGATGTGGCAGAATAAT+GGG | + | chr7.2:29682379-29682398 | None:intergenic | 35.0% | |
TTGTCAAGAACCAAACTAAG+AGG | + | chr7.2:29682028-29682047 | None:intergenic | 35.0% | |
! | TTAGGGTTATTTGAGTTAGG+AGG | + | chr7.2:29682625-29682644 | None:intergenic | 35.0% |
!! | ATTTGGTTGGTTTGCATTAG+TGG | - | chr7.2:29682300-29682319 | MS.gene27637:CDS | 35.0% |
!! | TTGTTCAAGTTTTCCACTCT+GGG | + | chr7.2:29682827-29682846 | None:intergenic | 35.0% |
!! | TTTGTTCAAGTTTTCCACTC+TGG | + | chr7.2:29682828-29682847 | None:intergenic | 35.0% |
!!! | TTTTACCGATTTCCTTCAAG+GGG | - | chr7.2:29683034-29683053 | MS.gene27637:CDS | 35.0% |
ACACAGAAACTGAATCACCA+TGG | + | chr7.2:29682897-29682916 | None:intergenic | 40.0% | |
ACTCTAAACCATGCATACCA+TGG | + | chr7.2:29682972-29682991 | None:intergenic | 40.0% | |
AGAAGAACTGCCTCTTAGTT+TGG | - | chr7.2:29682015-29682034 | MS.gene27637:CDS | 40.0% | |
AGGAGGATTGTTGAACTTGA+AGG | + | chr7.2:29682608-29682627 | None:intergenic | 40.0% | |
AGGTGTATGGACTCTTCATT+TGG | - | chr7.2:29682283-29682302 | MS.gene27637:CDS | 40.0% | |
CACATAGAGCATGTTAGGTT+TGG | - | chr7.2:29682058-29682077 | MS.gene27637:CDS | 40.0% | |
GAGATCTATAATGCGAAGGA+TGG | - | chr7.2:29682994-29683013 | MS.gene27637:CDS | 40.0% | |
GTATGGACTCTTCATTTGGT+TGG | - | chr7.2:29682287-29682306 | MS.gene27637:CDS | 40.0% | |
GTTGAGATGTGGCAGAATAA+TGG | + | chr7.2:29682380-29682399 | None:intergenic | 40.0% | |
TCTTCGAGGATCATGATCAT+GGG | + | chr7.2:29682157-29682176 | None:intergenic | 40.0% | |
TTCTAACTTGGAGAAACGAG+AGG | + | chr7.2:29682923-29682942 | None:intergenic | 40.0% | |
! | AAAGAGCAAGCCAACCATTT+TGG | - | chr7.2:29682494-29682513 | MS.gene27637:CDS | 40.0% |
ACATCTCAACTCTCCCTACA+AGG | - | chr7.2:29682390-29682409 | MS.gene27637:CDS | 45.0% | |
ACCAATACCATTCGTCTTCG+AGG | + | chr7.2:29682171-29682190 | None:intergenic | 45.0% | |
AGCAGACAAGGTAACCTTGT+AGG | + | chr7.2:29682407-29682426 | None:intergenic | 45.0% | |
ATGCGAAGATAGCTAGCACA+AGG | - | chr7.2:29682656-29682675 | MS.gene27637:CDS | 45.0% | |
GCAGACAAGGTAACCTTGTA+GGG | + | chr7.2:29682406-29682425 | None:intergenic | 45.0% | |
GGTTCGACCGCAATTTCAAT+GGG | - | chr7.2:29683071-29683090 | MS.gene27637:CDS | 45.0% | |
GTCTTCGAGGATCATGATCA+TGG | + | chr7.2:29682158-29682177 | None:intergenic | 45.0% | |
GTGCAAGAATTGGCAATCAG+TGG | - | chr7.2:29682087-29682106 | MS.gene27637:CDS | 45.0% | |
TCATGATCCTCGAAGACGAA+TGG | - | chr7.2:29682161-29682180 | MS.gene27637:CDS | 45.0% | |
TCCTCGAAGACGAATGGTAT+TGG | - | chr7.2:29682167-29682186 | MS.gene27637:CDS | 45.0% | |
TGTAATTGGGTCAGCAGACA+AGG | + | chr7.2:29682419-29682438 | None:intergenic | 45.0% | |
TTGTAGGGAGAGTTGAGATG+TGG | + | chr7.2:29682391-29682410 | None:intergenic | 45.0% | |
!! | TTGGTGTCGTGTGCAAGAAT+TGG | - | chr7.2:29682077-29682096 | MS.gene27637:CDS | 45.0% |
AAAACCTCGCATCCCCTTGA+AGG | + | chr7.2:29683049-29683068 | None:intergenic | 50.0% | |
AATGGTGTGTCCTTCACGGT+CGG | + | chr7.2:29682581-29682600 | None:intergenic | 50.0% | |
ATTTCCTTCAAGGGGATGCG+AGG | - | chr7.2:29683042-29683061 | MS.gene27637:CDS | 50.0% | |
CGCATCCCCTTGAAGGAAAT+CGG | + | chr7.2:29683042-29683061 | None:intergenic | 50.0% | |
GGGTTCGACCGCAATTTCAA+TGG | - | chr7.2:29683070-29683089 | MS.gene27637:CDS | 50.0% | |
TCGAGGATCATGATCATGGG+TGG | + | chr7.2:29682154-29682173 | None:intergenic | 50.0% | |
TTAGAACTGGATGCCCAGAG+TGG | - | chr7.2:29682811-29682830 | MS.gene27637:CDS | 50.0% | |
! | CAAGGGGATGCGAGGTTTTT+GGG | - | chr7.2:29683050-29683069 | MS.gene27637:CDS | 50.0% |
! | TCAAGGGGATGCGAGGTTTT+TGG | - | chr7.2:29683049-29683068 | MS.gene27637:CDS | 50.0% |
!! | TTGCTATTTGCCGACCGTGA+AGG | - | chr7.2:29682568-29682587 | MS.gene27637:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 29681986 | 29683098 | 29681986 | ID=MS.gene27637 |
chr7.2 | mRNA | 29681986 | 29683098 | 29681986 | ID=MS.gene27637.t1;Parent=MS.gene27637 |
chr7.2 | exon | 29681986 | 29683098 | 29681986 | ID=MS.gene27637.t1.exon1;Parent=MS.gene27637.t1 |
chr7.2 | CDS | 29681986 | 29683098 | 29681986 | ID=cds.MS.gene27637.t1;Parent=MS.gene27637.t1 |
Gene Sequence |
Protein sequence |