Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43191.t1 | RHN46952.1 | 67.2 | 372 | 119 | 3 | 1 | 372 | 1 | 369 | 2.00E-130 | 475.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43191.t1 | G7L4M6 | 67.2 | 372 | 119 | 3 | 1 | 372 | 1 | 369 | 1.4e-130 | 475.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43191.t1 | MTR_7g077620 | 67.204 | 372 | 119 | 3 | 1 | 372 | 1 | 369 | 3.50e-169 | 478 |
MS.gene43191.t1 | MTR_7g077650 | 64.042 | 381 | 122 | 6 | 1 | 375 | 1 | 372 | 4.56e-158 | 449 |
MS.gene43191.t1 | MTR_7g077660 | 63.926 | 377 | 125 | 5 | 1 | 375 | 1 | 368 | 1.83e-153 | 437 |
MS.gene43191.t1 | MTR_7g076110 | 55.219 | 297 | 122 | 6 | 86 | 375 | 21 | 313 | 4.81e-99 | 296 |
MS.gene43191.t1 | MTR_7g076100 | 63.713 | 237 | 84 | 2 | 139 | 375 | 66 | 300 | 3.88e-94 | 283 |
MS.gene43191.t1 | MTR_7g076100 | 78.000 | 50 | 11 | 0 | 4 | 53 | 5 | 54 | 2.20e-20 | 90.9 |
MS.gene43191.t1 | MTR_1g108740 | 45.288 | 382 | 162 | 16 | 1 | 373 | 1 | 344 | 9.96e-85 | 261 |
MS.gene43191.t1 | MTR_5g038260 | 39.801 | 402 | 191 | 15 | 3 | 375 | 4 | 383 | 6.72e-76 | 239 |
MS.gene43191.t1 | MTR_5g082770 | 46.474 | 312 | 131 | 8 | 5 | 307 | 4 | 288 | 2.50e-73 | 230 |
MS.gene43191.t1 | MTR_5g038230 | 38.734 | 395 | 171 | 15 | 5 | 373 | 4 | 353 | 1.31e-70 | 225 |
MS.gene43191.t1 | MTR_1g064570 | 38.333 | 420 | 191 | 16 | 3 | 375 | 2 | 400 | 1.04e-66 | 216 |
MS.gene43191.t1 | MTR_7g076130 | 69.600 | 125 | 38 | 0 | 168 | 292 | 24 | 148 | 5.69e-54 | 175 |
MS.gene43191.t1 | MTR_1g016150 | 49.474 | 190 | 88 | 6 | 1 | 185 | 1 | 187 | 2.27e-47 | 161 |
MS.gene43191.t1 | MTR_1g016150 | 61.538 | 65 | 19 | 2 | 257 | 321 | 177 | 235 | 9.99e-13 | 67.8 |
MS.gene43191.t1 | MTR_5g082780 | 38.298 | 235 | 109 | 9 | 120 | 340 | 6 | 218 | 9.48e-34 | 125 |
MS.gene43191.t1 | MTR_1g108750 | 43.949 | 157 | 51 | 5 | 5 | 160 | 4 | 124 | 2.85e-22 | 91.3 |
MS.gene43191.t1 | MTR_3g114970 | 24.021 | 383 | 210 | 17 | 1 | 352 | 1 | 333 | 5.22e-13 | 69.7 |
MS.gene43191.t1 | MTR_3g114990 | 23.929 | 397 | 221 | 16 | 3 | 352 | 21 | 383 | 3.22e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 72 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGAGCAAGCCAATCATTT+TGG | 0.214143 | 7.2:-78575365 | MS.gene43191:CDS |
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7.2:+78575210 | None:intergenic |
AGGAGGATTATTGAACTTAA+AGG | 0.273304 | 7.2:+78575251 | None:intergenic |
AATGAACAAACTTGAGAGTT+TGG | 0.291432 | 7.2:-78575004 | MS.gene43191:CDS |
TACTCACTTGGGCTTGTAAT+CGG | 0.312123 | 7.2:+78575429 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.2:-78575815 | MS.gene43191:CDS |
TTCGAGAGGTGGCAAACTAA+TGG | 0.352493 | 7.2:+78575482 | None:intergenic |
GATCTTTACCCCGTCCCTTC+AGG | 0.356454 | 7.2:-78574819 | MS.gene43191:CDS |
AACGACCTTCACCATAGCTT+TGG | 0.364212 | 7.2:+78575157 | None:intergenic |
CAAGAACATGAGTGTGTGTT+TGG | 0.364316 | 7.2:-78575586 | MS.gene43191:CDS |
AGAAGCCTATCCTCTTAGTT+TGG | 0.365278 | 7.2:-78575853 | MS.gene43191:CDS |
TGATGTTTACAAATTAAAAC+TGG | 0.368827 | 7.2:-78575052 | MS.gene43191:CDS |
CAAGGATGGGATAACTGAAT+AGG | 0.377070 | 7.2:+78575612 | None:intergenic |
TAGCAATGGGGAAGTTAGAT+TGG | 0.377310 | 7.2:-78575884 | None:intergenic |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7.2:+78575211 | None:intergenic |
TCGAGAGGTGGCAAACTAAT+GGG | 0.396706 | 7.2:+78575483 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.400301 | 7.2:-78575810 | MS.gene43191:CDS |
GGGTTCTACCACAATTTCAA+TGG | 0.408660 | 7.2:-78574780 | MS.gene43191:CDS |
ACGACCTTCACCATAGCTTT+GGG | 0.423915 | 7.2:+78575158 | None:intergenic |
CGCCTCTGCTTTCTCCAAGA+TGG | 0.446470 | 7.2:-78574932 | MS.gene43191:CDS |
ACTCACTTGGGCTTGTAATC+GGG | 0.449180 | 7.2:+78575430 | None:intergenic |
AAGGATGGGATAACTGAATA+GGG | 0.462191 | 7.2:+78575613 | None:intergenic |
TTGGCGTGGTGTGCAAGAAT+TGG | 0.475029 | 7.2:-78575791 | MS.gene43191:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7.2:-78574779 | MS.gene43191:CDS |
CTGGTATTTGCTGACAACCT+TGG | 0.497796 | 7.2:-78575288 | MS.gene43191:CDS |
AGCAATGGGGAAGTTAGATT+GGG | 0.499131 | 7.2:-78575883 | None:intergenic |
AAGAACATGAGTGTGTGTTT+GGG | 0.500810 | 7.2:-78575585 | MS.gene43191:CDS |
TCATGTTCTTGATGCAAGGA+TGG | 0.501083 | 7.2:+78575598 | None:intergenic |
TAGTTTGGTACTTGATAAGT+TGG | 0.501505 | 7.2:-78575838 | MS.gene43191:CDS |
GTGTGTTTGGGCTTTAGCCA+TGG | 0.507415 | 7.2:-78575573 | MS.gene43191:CDS |
TAGCATCTTCCTGAAGGGAC+GGG | 0.508712 | 7.2:+78574810 | None:intergenic |
CTACACGGATCCAAAATGAT+TGG | 0.509049 | 7.2:+78575355 | None:intergenic |
CCTTCACCATAGCTTTGGGC+TGG | 0.509210 | 7.2:+78575162 | None:intergenic |
GTTTGGGCTTTAGCCATGGT+TGG | 0.511722 | 7.2:-78575569 | MS.gene43191:CDS |
TTATCAAGTACCAAACTAAG+AGG | 0.513488 | 7.2:+78575843 | None:intergenic |
AATCGTTGAATGGAGACATA+TGG | 0.523073 | 7.2:-78575125 | MS.gene43191:CDS |
CATATCTATAATGCGGAGGA+TGG | 0.531607 | 7.2:-78574856 | MS.gene43191:CDS |
AGGATACAATGGTGCGTCCA+AGG | 0.537916 | 7.2:+78575271 | None:intergenic |
GCTGCAACCACATACTCACT+TGG | 0.539884 | 7.2:+78575417 | None:intergenic |
GTTGATGAAAGTGATAAAGA+TGG | 0.555094 | 7.2:-78574889 | MS.gene43191:CDS |
AAAATGTAGCATCTTCCTGA+AGG | 0.561599 | 7.2:+78574804 | None:intergenic |
AAGTACCAAACTAAGAGGAT+AGG | 0.568196 | 7.2:+78575848 | None:intergenic |
AGTGTTCCAGCCCAAAGCTA+TGG | 0.568256 | 7.2:-78575168 | MS.gene43191:CDS |
GTAGCATCTTCCTGAAGGGA+CGG | 0.568660 | 7.2:+78574809 | None:intergenic |
TACAAGCCCAAGTGAGTATG+TGG | 0.569105 | 7.2:-78575424 | MS.gene43191:CDS |
GGTCAATCCCATTGAAATTG+TGG | 0.574786 | 7.2:+78574772 | None:intergenic |
AGCATCTTCCTGAAGGGACG+GGG | 0.577537 | 7.2:+78574811 | None:intergenic |
ACCTCTCGAAAATATCAAGA+AGG | 0.578390 | 7.2:-78575469 | MS.gene43191:CDS |
TGTAATCGGGTCAGCAGACA+AGG | 0.580068 | 7.2:+78575443 | None:intergenic |
TACGATAATTTATGTATGAG+AGG | 0.585202 | 7.2:+78575700 | None:intergenic |
ACACTCATGTTCTTGATGCA+AGG | 0.588895 | 7.2:+78575594 | None:intergenic |
ATTGAACTTAAAGGATACAA+TGG | 0.590271 | 7.2:+78575260 | None:intergenic |
CATGTTCTTGATGCAAGGAT+GGG | 0.593302 | 7.2:+78575599 | None:intergenic |
GAGAGGATCATCAACAAAGG+TGG | 0.600429 | 7.2:+78575717 | None:intergenic |
GTTGCAGCGATTTACAATTG+TGG | 0.603650 | 7.2:-78575402 | MS.gene43191:CDS |
AGAGGATCATCAACAAAGGT+GGG | 0.609595 | 7.2:+78575718 | None:intergenic |
AAATGTAGCATCTTCCTGAA+GGG | 0.613321 | 7.2:+78574805 | None:intergenic |
TTCCATCTTGGAGAAAGCAG+AGG | 0.613967 | 7.2:+78574930 | None:intergenic |
CTGCAACCACATACTCACTT+GGG | 0.622251 | 7.2:+78575418 | None:intergenic |
AGATCATGTTAGGTTTGGCG+TGG | 0.628602 | 7.2:-78575805 | MS.gene43191:CDS |
CCAGCCCAAAGCTATGGTGA+AGG | 0.629782 | 7.2:-78575162 | MS.gene43191:CDS |
CATCTTGGAGAAAGCAGAGG+CGG | 0.635809 | 7.2:+78574933 | None:intergenic |
GGGTCATTTGAGTCATCACA+AGG | 0.644746 | 7.2:+78575231 | None:intergenic |
TGAGTTACATATCTATAATG+CGG | 0.657813 | 7.2:-78574863 | MS.gene43191:CDS |
GTGTAGACATAAATGAATTG+TGG | 0.661724 | 7.2:-78575338 | MS.gene43191:CDS |
ACAATTCATTTATGTCTACA+CGG | 0.669650 | 7.2:+78575340 | None:intergenic |
GTTACATATCTATAATGCGG+AGG | 0.671372 | 7.2:-78574860 | MS.gene43191:CDS |
TTAAAACTGGATGCCCAGAG+TGG | 0.678752 | 7.2:-78575039 | MS.gene43191:CDS |
TATGAGAGGATCATCAACAA+AGG | 0.683539 | 7.2:+78575714 | None:intergenic |
GTTGAATGGAGACATATGGA+TGG | 0.713125 | 7.2:-78575121 | MS.gene43191:CDS |
TCATTTGAGTCATCACAAGG+AGG | 0.722989 | 7.2:+78575234 | None:intergenic |
GTAAACATCAAAATTATACG+AGG | 0.728568 | 7.2:+78575065 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCATAAAAATCATCAATTT+AGG | - | chr7.2:78574904-78574923 | MS.gene43191:CDS | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | + | chr7.2:78575445-78575464 | None:intergenic | 20.0% |
!! | TGATGTTTACAAATTAAAAC+TGG | - | chr7.2:78575601-78575620 | MS.gene43191:CDS | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | + | chr7.2:78575446-78575465 | None:intergenic | 20.0% |
!!! | ACGAATGTTGTATTTTATAA+AGG | - | chr7.2:78575341-78575360 | MS.gene43191:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr7.2:78574908-78574927 | None:intergenic | 20.0% |
! | AAAAAGTTTCACTAGTGTTA+TGG | + | chr7.2:78575135-78575154 | None:intergenic | 25.0% |
! | ACAATTCATTTATGTCTACA+CGG | + | chr7.2:78575316-78575335 | None:intergenic | 25.0% |
! | ATTGAACTTAAAGGATACAA+TGG | + | chr7.2:78575396-78575415 | None:intergenic | 25.0% |
! | GTAAACATCAAAATTATACG+AGG | + | chr7.2:78575591-78575610 | None:intergenic | 25.0% |
! | TACGATAATTTATGTATGAG+AGG | + | chr7.2:78574956-78574975 | None:intergenic | 25.0% |
! | TGAGTTACATATCTATAATG+CGG | - | chr7.2:78575790-78575809 | MS.gene43191:CDS | 25.0% |
!! | AATTGAATTCTTTTCCATCT+TGG | + | chr7.2:78575738-78575757 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCGTTGAA+TGG | - | chr7.2:78575518-78575537 | MS.gene43191:CDS | 25.0% |
!! | TGTTGTATTTTATAAAGGTC+TGG | - | chr7.2:78575346-78575365 | MS.gene43191:CDS | 25.0% |
!!! | ATTTTATTTGTCGGAAACTT+TGG | - | chr7.2:78575680-78575699 | MS.gene43191:CDS | 25.0% |
!!! | GAAGACAACATTTTATTTGT+CGG | - | chr7.2:78575671-78575690 | MS.gene43191:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | chr7.2:78574838-78574857 | MS.gene43191:CDS | 30.0% | |
AATGAACAAACTTGAGAGTT+TGG | - | chr7.2:78575649-78575668 | MS.gene43191:CDS | 30.0% | |
AGGAGGATTATTGAACTTAA+AGG | + | chr7.2:78575405-78575424 | None:intergenic | 30.0% | |
GTGTAGACATAAATGAATTG+TGG | - | chr7.2:78575315-78575334 | MS.gene43191:CDS | 30.0% | |
TAGTTTGGTACTTGATAAGT+TGG | - | chr7.2:78574815-78574834 | MS.gene43191:CDS | 30.0% | |
TTATCAAGTACCAAACTAAG+AGG | + | chr7.2:78574813-78574832 | None:intergenic | 30.0% | |
! | GTTGATGAAAGTGATAAAGA+TGG | - | chr7.2:78575764-78575783 | MS.gene43191:CDS | 30.0% |
AAAATGTAGCATCTTCCTGA+AGG | + | chr7.2:78575852-78575871 | None:intergenic | 35.0% | |
AAATGTAGCATCTTCCTGAA+GGG | + | chr7.2:78575851-78575870 | None:intergenic | 35.0% | |
AAGAACATGAGTGTGTGTTT+GGG | - | chr7.2:78575068-78575087 | MS.gene43191:CDS | 35.0% | |
AAGGATGGGATAACTGAATA+GGG | + | chr7.2:78575043-78575062 | None:intergenic | 35.0% | |
AAGTACCAAACTAAGAGGAT+AGG | + | chr7.2:78574808-78574827 | None:intergenic | 35.0% | |
AATCGTTGAATGGAGACATA+TGG | - | chr7.2:78575528-78575547 | MS.gene43191:CDS | 35.0% | |
ACCTCTCGAAAATATCAAGA+AGG | - | chr7.2:78575184-78575203 | MS.gene43191:CDS | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.2:78574843-78574862 | MS.gene43191:CDS | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr7.2:78575874-78575893 | MS.gene43191:CDS | 35.0% | |
GTTACATATCTATAATGCGG+AGG | - | chr7.2:78575793-78575812 | MS.gene43191:CDS | 35.0% | |
TATGAGAGGATCATCAACAA+AGG | + | chr7.2:78574942-78574961 | None:intergenic | 35.0% | |
! | AAAGAGCAAGCCAATCATTT+TGG | - | chr7.2:78575288-78575307 | MS.gene43191:CDS | 35.0% |
! | CAGGAAGATGCTACATTTTT+GGG | - | chr7.2:78575853-78575872 | MS.gene43191:CDS | 35.0% |
! | TCAGGAAGATGCTACATTTT+TGG | - | chr7.2:78575852-78575871 | MS.gene43191:CDS | 35.0% |
!! | ACCTTCTTGATATTTTCGAG+AGG | + | chr7.2:78575188-78575207 | None:intergenic | 35.0% |
!! | ATTTTAATGCAAGCCAACCA+TGG | + | chr7.2:78575100-78575119 | None:intergenic | 35.0% |
!! | TTCTTGATATTTTCGAGAGG+TGG | + | chr7.2:78575185-78575204 | None:intergenic | 35.0% |
!! | TTGTTCAAGTTTTCCACTCT+GGG | + | chr7.2:78575630-78575649 | None:intergenic | 35.0% |
!! | TTTGTTCAAGTTTTCCACTC+TGG | + | chr7.2:78575631-78575650 | None:intergenic | 35.0% |
ACACTCATGTTCTTGATGCA+AGG | + | chr7.2:78575062-78575081 | None:intergenic | 40.0% | |
AGAAGCCTATCCTCTTAGTT+TGG | - | chr7.2:78574800-78574819 | MS.gene43191:CDS | 40.0% | |
AGAGGATCATCAACAAAGGT+GGG | + | chr7.2:78574938-78574957 | None:intergenic | 40.0% | |
CAAGAACATGAGTGTGTGTT+TGG | - | chr7.2:78575067-78575086 | MS.gene43191:CDS | 40.0% | |
CAAGGATGGGATAACTGAAT+AGG | + | chr7.2:78575044-78575063 | None:intergenic | 40.0% | |
CATATCTATAATGCGGAGGA+TGG | - | chr7.2:78575797-78575816 | MS.gene43191:CDS | 40.0% | |
CATGTTCTTGATGCAAGGAT+GGG | + | chr7.2:78575057-78575076 | None:intergenic | 40.0% | |
CTACACGGATCCAAAATGAT+TGG | + | chr7.2:78575301-78575320 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr7.2:78575873-78575892 | MS.gene43191:CDS | 40.0% | |
GTTGAATGGAGACATATGGA+TGG | - | chr7.2:78575532-78575551 | MS.gene43191:CDS | 40.0% | |
GTTGCAGCGATTTACAATTG+TGG | - | chr7.2:78575251-78575270 | MS.gene43191:CDS | 40.0% | |
TACTCACTTGGGCTTGTAAT+CGG | + | chr7.2:78575227-78575246 | None:intergenic | 40.0% | |
TCATGTTCTTGATGCAAGGA+TGG | + | chr7.2:78575058-78575077 | None:intergenic | 40.0% | |
TCATTTGAGTCATCACAAGG+AGG | + | chr7.2:78575422-78575441 | None:intergenic | 40.0% | |
AACGACCTTCACCATAGCTT+TGG | + | chr7.2:78575499-78575518 | None:intergenic | 45.0% | |
ACGACCTTCACCATAGCTTT+GGG | + | chr7.2:78575498-78575517 | None:intergenic | 45.0% | |
ACTCACTTGGGCTTGTAATC+GGG | + | chr7.2:78575226-78575245 | None:intergenic | 45.0% | |
AGATCATGTTAGGTTTGGCG+TGG | - | chr7.2:78574848-78574867 | MS.gene43191:CDS | 45.0% | |
CTGCAACCACATACTCACTT+GGG | + | chr7.2:78575238-78575257 | None:intergenic | 45.0% | |
GAGAGGATCATCAACAAAGG+TGG | + | chr7.2:78574939-78574958 | None:intergenic | 45.0% | |
GGGTCATTTGAGTCATCACA+AGG | + | chr7.2:78575425-78575444 | None:intergenic | 45.0% | |
TACAAGCCCAAGTGAGTATG+TGG | - | chr7.2:78575229-78575248 | MS.gene43191:CDS | 45.0% | |
TCGAGAGGTGGCAAACTAAT+GGG | + | chr7.2:78575173-78575192 | None:intergenic | 45.0% | |
TTAAAACTGGATGCCCAGAG+TGG | - | chr7.2:78575614-78575633 | MS.gene43191:CDS | 45.0% | |
TTCCATCTTGGAGAAAGCAG+AGG | + | chr7.2:78575726-78575745 | None:intergenic | 45.0% | |
TTCGAGAGGTGGCAAACTAA+TGG | + | chr7.2:78575174-78575193 | None:intergenic | 45.0% | |
! | CTGGTATTTGCTGACAACCT+TGG | - | chr7.2:78575365-78575384 | MS.gene43191:CDS | 45.0% |
AGGATACAATGGTGCGTCCA+AGG | + | chr7.2:78575385-78575404 | None:intergenic | 50.0% | |
AGTGTTCCAGCCCAAAGCTA+TGG | - | chr7.2:78575485-78575504 | MS.gene43191:CDS | 50.0% | |
CATCTTGGAGAAAGCAGAGG+CGG | + | chr7.2:78575723-78575742 | None:intergenic | 50.0% | |
GCTGCAACCACATACTCACT+TGG | + | chr7.2:78575239-78575258 | None:intergenic | 50.0% | |
GTAGCATCTTCCTGAAGGGA+CGG | + | chr7.2:78575847-78575866 | None:intergenic | 50.0% | |
TAGCATCTTCCTGAAGGGAC+GGG | + | chr7.2:78575846-78575865 | None:intergenic | 50.0% | |
TGTAATCGGGTCAGCAGACA+AGG | + | chr7.2:78575213-78575232 | None:intergenic | 50.0% | |
TTGGCGTGGTGTGCAAGAAT+TGG | - | chr7.2:78574862-78574881 | MS.gene43191:CDS | 50.0% | |
! | GTGTGTTTGGGCTTTAGCCA+TGG | - | chr7.2:78575080-78575099 | MS.gene43191:CDS | 50.0% |
! | GTTTGGGCTTTAGCCATGGT+TGG | - | chr7.2:78575084-78575103 | MS.gene43191:CDS | 50.0% |
AGCATCTTCCTGAAGGGACG+GGG | + | chr7.2:78575845-78575864 | None:intergenic | 55.0% | |
CCAGCCCAAAGCTATGGTGA+AGG | - | chr7.2:78575491-78575510 | MS.gene43191:CDS | 55.0% | |
CGCCTCTGCTTTCTCCAAGA+TGG | - | chr7.2:78575721-78575740 | MS.gene43191:CDS | 55.0% | |
GATCTTTACCCCGTCCCTTC+AGG | - | chr7.2:78575834-78575853 | MS.gene43191:CDS | 55.0% | |
!! | CCTTCACCATAGCTTTGGGC+TGG | + | chr7.2:78575494-78575513 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 78574774 | 78575901 | 78574774 | ID=MS.gene43191 |
chr7.2 | mRNA | 78574774 | 78575901 | 78574774 | ID=MS.gene43191.t1;Parent=MS.gene43191 |
chr7.2 | exon | 78574774 | 78575901 | 78574774 | ID=MS.gene43191.t1.exon1;Parent=MS.gene43191.t1 |
chr7.2 | CDS | 78574774 | 78575901 | 78574774 | ID=cds.MS.gene43191.t1;Parent=MS.gene43191.t1 |
Gene Sequence |
Protein sequence |