Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023787.t1 | ABN08820.1 | 58.1 | 339 | 100 | 8 | 1 | 328 | 1 | 308 | 1.60E-91 | 346.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023787.t1 | A2Q5C0 | 58.1 | 339 | 100 | 8 | 1 | 328 | 1 | 308 | 1.1e-91 | 346.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023787.t1 | MTR_7g076100 | 59.226 | 336 | 93 | 7 | 1 | 328 | 1 | 300 | 1.39e-121 | 352 |
MS.gene023787.t1 | MTR_7g077620 | 53.003 | 383 | 110 | 8 | 1 | 326 | 1 | 370 | 4.17e-119 | 348 |
MS.gene023787.t1 | MTR_7g077650 | 49.357 | 389 | 119 | 10 | 1 | 328 | 1 | 372 | 9.20e-106 | 314 |
MS.gene023787.t1 | MTR_7g077660 | 49.874 | 397 | 101 | 14 | 1 | 328 | 1 | 368 | 2.67e-102 | 305 |
MS.gene023787.t1 | MTR_7g076110 | 54.365 | 252 | 91 | 8 | 87 | 328 | 76 | 313 | 7.88e-79 | 243 |
MS.gene023787.t1 | MTR_7g076130 | 73.387 | 124 | 27 | 3 | 119 | 236 | 25 | 148 | 8.23e-57 | 181 |
MS.gene023787.t1 | MTR_5g038260 | 35.802 | 405 | 151 | 16 | 6 | 328 | 6 | 383 | 1.42e-56 | 188 |
MS.gene023787.t1 | MTR_1g108740 | 36.693 | 387 | 138 | 13 | 3 | 326 | 2 | 344 | 2.32e-55 | 184 |
MS.gene023787.t1 | MTR_1g064570 | 35.577 | 416 | 158 | 15 | 5 | 328 | 3 | 400 | 4.68e-52 | 177 |
MS.gene023787.t1 | MTR_5g038230 | 34.091 | 396 | 140 | 14 | 6 | 326 | 4 | 353 | 2.88e-50 | 171 |
MS.gene023787.t1 | MTR_5g082770 | 37.838 | 296 | 123 | 8 | 6 | 251 | 4 | 288 | 1.67e-44 | 154 |
MS.gene023787.t1 | MTR_1g016150 | 36.567 | 268 | 130 | 7 | 3 | 264 | 2 | 235 | 1.26e-36 | 132 |
MS.gene023787.t1 | MTR_5g082780 | 38.208 | 212 | 97 | 6 | 81 | 279 | 24 | 214 | 2.34e-32 | 120 |
MS.gene023787.t1 | MTR_1g108750 | 43.411 | 129 | 41 | 4 | 6 | 110 | 4 | 124 | 1.36e-20 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 73 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7.1:+27088806 | None:intergenic |
AAAGAGCACGCCAACCATTT+TGG | 0.235367 | 7.1:-27088955 | MS.gene023787:CDS |
GCATGTTGACCCTATGTTTA+TGG | 0.235574 | 7.1:+27089327 | None:intergenic |
TGTGAAGGATGGAAGCTTTC+GGG | 0.254954 | 7.1:-27088420 | MS.gene023787:CDS |
ATTCCTTTAGAAGATACTTT+TGG | 0.274093 | 7.1:-27088382 | MS.gene023787:CDS |
AAGTCTTGATGTATATAAAT+TGG | 0.276584 | 7.1:-27088666 | MS.gene023787:CDS |
AATGAACAAGCTTGAGAGTT+TGG | 0.278023 | 7.1:-27088612 | MS.gene023787:CDS |
AAGATTACAAAATCCGTAAA+TGG | 0.312492 | 7.1:+27088985 | None:intergenic |
ATAGAAGTGAGTTTGATTCT+AGG | 0.333522 | 7.1:-27088457 | MS.gene023787:CDS |
TAATCATTAGGGCTTGTAAT+GGG | 0.360286 | 7.1:+27089019 | None:intergenic |
AAGAACACATCGATCATGTT+AGG | 0.364419 | 7.1:-27089394 | MS.gene023787:CDS |
TCACGAGCTATAATCCAAAA+TGG | 0.365846 | 7.1:+27088941 | None:intergenic |
TATGTCGTTGCAGCCATTTA+CGG | 0.367345 | 7.1:-27088998 | MS.gene023787:CDS |
ACCATTGGTCTTTGAGGATC+AGG | 0.373227 | 7.1:+27089294 | None:intergenic |
AGAAGAGCTACCTCTTAGTT+TGG | 0.376131 | 7.1:-27089432 | MS.gene023787:CDS |
GCTGCAACGACATAATCATT+AGG | 0.378882 | 7.1:+27089007 | None:intergenic |
ATGTGAAGGATGGAAGCTTT+CGG | 0.382705 | 7.1:-27088421 | MS.gene023787:CDS |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7.1:+27088807 | None:intergenic |
GCCATACAAGGATCTCTTCC+CGG | 0.394890 | 7.1:+27089247 | None:intergenic |
GGGTTCAACCACAATTTCAA+TGG | 0.403923 | 7.1:-27088361 | MS.gene023787:CDS |
AACCTCTTGTTTCTCCAAGT+TGG | 0.405691 | 7.1:-27088543 | MS.gene023787:CDS |
CTGCAACGACATAATCATTA+GGG | 0.419633 | 7.1:+27089008 | None:intergenic |
AAAGCCTTTCATCGTAGCAT+TGG | 0.428788 | 7.1:+27088753 | None:intergenic |
AATCGAATCACTTTCCAACT+TGG | 0.429331 | 7.1:+27088529 | None:intergenic |
ACCAATACCATTGGTCTTTG+AGG | 0.432284 | 7.1:+27089288 | None:intergenic |
AAGCCTTTCATCGTAGCATT+GGG | 0.439729 | 7.1:+27088754 | None:intergenic |
TCTTTGAGGATCAGGATCAT+TGG | 0.444334 | 7.1:+27089302 | None:intergenic |
CACATCGATCATGTTAGGTT+TGG | 0.454086 | 7.1:-27089389 | MS.gene023787:CDS |
TGATGTATATAAATTGGAAC+TGG | 0.461520 | 7.1:-27088660 | MS.gene023787:CDS |
AGTGAGTTTGATTCTAGGCT+AGG | 0.464620 | 7.1:-27088452 | MS.gene023787:CDS |
CAATGACGAAGGTGGCAGAC+TGG | 0.469940 | 7.1:-27089463 | MS.gene023787:CDS |
TTTGAGATTGATTCTAGGCT+AGG | 0.472790 | 7.1:-27088497 | MS.gene023787:CDS |
GGTTCAACCACAATTTCAAT+GGG | 0.475405 | 7.1:-27088360 | MS.gene023787:CDS |
TCCTCAAAGACCAATGGTAT+TGG | 0.480545 | 7.1:-27089289 | MS.gene023787:CDS |
CAAAGCTTAACCATAAACAT+AGG | 0.485104 | 7.1:-27089337 | MS.gene023787:CDS |
TTGAGATTGATTCTAGGCTA+GGG | 0.501498 | 7.1:-27088496 | MS.gene023787:CDS |
AACCCAAAAGTATCTTCTAA+AGG | 0.503588 | 7.1:+27088379 | None:intergenic |
CAACCCAATGCTACGATGAA+AGG | 0.504295 | 7.1:-27088757 | MS.gene023787:CDS |
AATCTTTGAATGGAGACATA+TGG | 0.507395 | 7.1:-27088721 | MS.gene023787:CDS |
ATAATCATTAGGGCTTGTAA+TGG | 0.513412 | 7.1:+27089018 | None:intergenic |
TTGTCAAGAACCAAACTAAG+AGG | 0.513613 | 7.1:+27089422 | None:intergenic |
GATCAATCCCATTGAAATTG+TGG | 0.519492 | 7.1:+27088353 | None:intergenic |
GCGACTTAGAATGCCATACA+AGG | 0.519610 | 7.1:+27089235 | None:intergenic |
AGGAGGATTGTTGATCTTGA+AGG | 0.522699 | 7.1:+27088847 | None:intergenic |
TGTAATGGGGTCAGCGGACA+AGG | 0.524243 | 7.1:+27089033 | None:intergenic |
TAGTTTGGTTCTTGACAAGT+TGG | 0.526962 | 7.1:-27089417 | MS.gene023787:CDS |
CTTTCATCGTAGCATTGGGT+TGG | 0.532676 | 7.1:+27088758 | None:intergenic |
TTGGTGTCGTGTGCAAGTCT+TGG | 0.536928 | 7.1:-27089370 | MS.gene023787:CDS |
GAGCTATAATCCAAAATGGT+TGG | 0.539353 | 7.1:+27088945 | None:intergenic |
AATGACGAAGGTGGCAGACT+GGG | 0.539805 | 7.1:-27089462 | MS.gene023787:CDS |
GTGAGTTTGATTCTAGGCTA+GGG | 0.540534 | 7.1:-27088451 | MS.gene023787:CDS |
CTGATATTTGCTGACAGCCA+TGG | 0.542450 | 7.1:-27088884 | MS.gene023787:CDS |
GGGATCTATAATGTGAAGGA+TGG | 0.560695 | 7.1:-27088431 | MS.gene023787:CDS |
ACCGGGAAGAGATCCTTGTA+TGG | 0.564728 | 7.1:-27089248 | MS.gene023787:CDS |
TTGAGGATCAGGATCATTGG+TGG | 0.568755 | 7.1:+27089305 | None:intergenic |
ACACCTTTCACTTACCATAC+GGG | 0.569484 | 7.1:+27089187 | None:intergenic |
TTGGAACTGGATGCCGAGAG+TGG | 0.577039 | 7.1:-27088647 | MS.gene023787:CDS |
AAAGCTTAACCATAAACATA+GGG | 0.578569 | 7.1:-27089336 | MS.gene023787:CDS |
ACTCATGAGACCAATACCAT+TGG | 0.610733 | 7.1:+27089279 | None:intergenic |
GCTAGGGATCTATAATGTGA+AGG | 0.612222 | 7.1:-27088435 | MS.gene023787:CDS |
GCTAGGGATCTATAATGTGA+AGG | 0.614662 | 7.1:-27088480 | MS.gene023787:CDS |
AGGATACAATGGTGTGTCCA+TGG | 0.616988 | 7.1:+27088867 | None:intergenic |
AATCATTAGGGCTTGTAATG+GGG | 0.620431 | 7.1:+27089020 | None:intergenic |
TCCTGATCCTCAAAGACCAA+TGG | 0.626117 | 7.1:-27089295 | MS.gene023787:CDS |
TTCCAACTTGGAGAAACAAG+AGG | 0.627586 | 7.1:+27088541 | None:intergenic |
CTTAGGCTTGGCAATGACGA+AGG | 0.631068 | 7.1:-27089474 | None:intergenic |
GGGTCATATGAGTCATCGCA+AGG | 0.632363 | 7.1:+27088827 | None:intergenic |
GTTGATCTTGAAGGATACAA+TGG | 0.633785 | 7.1:+27088856 | None:intergenic |
AGGCTTGGCAATGACGAAGG+TGG | 0.649782 | 7.1:-27089471 | None:intergenic |
AGGGCTTGTAATGGGGTCAG+CGG | 0.661148 | 7.1:+27089027 | None:intergenic |
AAGTATCTTCTAAAGGAATG+CGG | 0.678372 | 7.1:+27088386 | None:intergenic |
TTTGAATGGAGACATATGGA+TGG | 0.693585 | 7.1:-27088717 | MS.gene023787:CDS |
TCATATGAGTCATCGCAAGG+AGG | 0.728268 | 7.1:+27088830 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTCTTGATGTATATAAAT+TGG | - | chr7.1:27089150-27089169 | MS.gene023787:intron | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | + | chr7.1:27089012-27089031 | None:intergenic | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | + | chr7.1:27089013-27089032 | None:intergenic | 20.0% |
!!! | AACATTTTATTTGTTGGAAT+CGG | - | chr7.1:27089232-27089251 | MS.gene023787:CDS | 20.0% |
!!! | ACTAGTGTTGTATTTTATAA+AGG | - | chr7.1:27088908-27088927 | MS.gene023787:CDS | 20.0% |
!!! | TATTTTGTGAAATCTTTGAA+TGG | - | chr7.1:27089085-27089104 | MS.gene023787:intron | 20.0% |
! | AAAGCTTAACCATAAACATA+GGG | - | chr7.1:27088480-27088499 | MS.gene023787:CDS | 25.0% |
! | AAGATTACAAAATCCGTAAA+TGG | + | chr7.1:27088834-27088853 | None:intergenic | 25.0% |
! | TACTACATACAACACTTAAA+AGG | + | chr7.1:27088718-27088737 | None:intergenic | 25.0% |
! | TGATGTATATAAATTGGAAC+TGG | - | chr7.1:27089156-27089175 | MS.gene023787:intron | 25.0% |
!!! | ACATTTTATTTGTTGGAATC+GGG | - | chr7.1:27089233-27089252 | MS.gene023787:CDS | 25.0% |
!!! | ATTCCTTTAGAAGATACTTT+TGG | - | chr7.1:27089434-27089453 | MS.gene023787:CDS | 25.0% |
!!! | GAAGACAACATTTTATTTGT+TGG | - | chr7.1:27089226-27089245 | MS.gene023787:CDS | 25.0% |
!!! | TTCCTTTAGAAGATACTTTT+GGG | - | chr7.1:27089435-27089454 | MS.gene023787:CDS | 25.0% |
!!! | TTCTTTTTGAGATTGATTCT+AGG | - | chr7.1:27089314-27089333 | MS.gene023787:CDS | 25.0% |
AAAAGGATTGACTAGAGTTA+TGG | + | chr7.1:27088701-27088720 | None:intergenic | 30.0% | |
AATCTTTGAATGGAGACATA+TGG | - | chr7.1:27089095-27089114 | MS.gene023787:intron | 30.0% | |
ATAATCATTAGGGCTTGTAA+TGG | + | chr7.1:27088801-27088820 | None:intergenic | 30.0% | |
ATACGGGATAAAAATGTAAC+AGG | + | chr7.1:27088616-27088635 | None:intergenic | 30.0% | |
ATAGAAGTGAGTTTGATTCT+AGG | - | chr7.1:27089359-27089378 | MS.gene023787:CDS | 30.0% | |
CAAAGCTTAACCATAAACAT+AGG | - | chr7.1:27088479-27088498 | MS.gene023787:CDS | 30.0% | |
TAATCATTAGGGCTTGTAAT+GGG | + | chr7.1:27088800-27088819 | None:intergenic | 30.0% | |
TACGGGATAAAAATGTAACA+GGG | + | chr7.1:27088615-27088634 | None:intergenic | 30.0% | |
! | AAGTATCTTCTAAAGGAATG+CGG | + | chr7.1:27089433-27089452 | None:intergenic | 30.0% |
! | TGTTACATTTTTATCCCGTA+TGG | - | chr7.1:27088615-27088634 | MS.gene023787:CDS | 30.0% |
!! | AACCCAAAAGTATCTTCTAA+AGG | + | chr7.1:27089440-27089459 | None:intergenic | 30.0% |
!! | CATTTTATTTGTTGGAATCG+GGG | - | chr7.1:27089234-27089253 | MS.gene023787:CDS | 30.0% |
!!! | ATTTGGTTGGTTTTCATTTG+TGG | - | chr7.1:27088663-27088682 | MS.gene023787:CDS | 30.0% |
AAGAACACATCGATCATGTT+AGG | - | chr7.1:27088422-27088441 | MS.gene023787:CDS | 35.0% | |
AATCATTAGGGCTTGTAATG+GGG | + | chr7.1:27088799-27088818 | None:intergenic | 35.0% | |
AATCGAATCACTTTCCAACT+TGG | + | chr7.1:27089290-27089309 | None:intergenic | 35.0% | |
AATGAACAAGCTTGAGAGTT+TGG | - | chr7.1:27089204-27089223 | MS.gene023787:CDS | 35.0% | |
ACCTCTCAAATCTGTTTACA+AGG | - | chr7.1:27088757-27088776 | MS.gene023787:CDS | 35.0% | |
CTGCAACGACATAATCATTA+GGG | + | chr7.1:27088811-27088830 | None:intergenic | 35.0% | |
GAGCTATAATCCAAAATGGT+TGG | + | chr7.1:27088874-27088893 | None:intergenic | 35.0% | |
GGTTCAACCACAATTTCAAT+GGG | - | chr7.1:27089456-27089475 | MS.gene023787:CDS | 35.0% | |
GTTGATCTTGAAGGATACAA+TGG | + | chr7.1:27088963-27088982 | None:intergenic | 35.0% | |
TCACGAGCTATAATCCAAAA+TGG | + | chr7.1:27088878-27088897 | None:intergenic | 35.0% | |
TCTCATGAGTATGCAAAAAC+CGG | - | chr7.1:27088550-27088569 | MS.gene023787:CDS | 35.0% | |
TTGTAAACAGATTTGAGAGG+TGG | + | chr7.1:27088758-27088777 | None:intergenic | 35.0% | |
TTGTCAAGAACCAAACTAAG+AGG | + | chr7.1:27088397-27088416 | None:intergenic | 35.0% | |
TTTGAATGGAGACATATGGA+TGG | - | chr7.1:27089099-27089118 | MS.gene023787:intron | 35.0% | |
! | TTGAGATTGATTCTAGGCTA+GGG | - | chr7.1:27089320-27089339 | MS.gene023787:CDS | 35.0% |
! | TTTGAGATTGATTCTAGGCT+AGG | - | chr7.1:27089319-27089338 | MS.gene023787:CDS | 35.0% |
!! | TAGTTTGGTTCTTGACAAGT+TGG | - | chr7.1:27088399-27088418 | MS.gene023787:CDS | 35.0% |
!! | TTGTTCAAGTTTTCCACTCT+CGG | + | chr7.1:27089185-27089204 | None:intergenic | 35.0% |
AAAGCCTTTCATCGTAGCAT+TGG | + | chr7.1:27089066-27089085 | None:intergenic | 40.0% | |
AAGCCTTTCATCGTAGCATT+GGG | + | chr7.1:27089065-27089084 | None:intergenic | 40.0% | |
ACACCTTTCACTTACCATAC+GGG | + | chr7.1:27088632-27088651 | None:intergenic | 40.0% | |
ACTCATGAGACCAATACCAT+TGG | + | chr7.1:27088540-27088559 | None:intergenic | 40.0% | |
AGAAGAGCTACCTCTTAGTT+TGG | - | chr7.1:27088384-27088403 | MS.gene023787:CDS | 40.0% | |
AGGAGGATTGTTGATCTTGA+AGG | + | chr7.1:27088972-27088991 | None:intergenic | 40.0% | |
AGTGAGTTTGATTCTAGGCT+AGG | - | chr7.1:27089364-27089383 | MS.gene023787:CDS | 40.0% | |
ATGTGAAGGATGGAAGCTTT+CGG | - | chr7.1:27089395-27089414 | MS.gene023787:CDS | 40.0% | |
CACATCGATCATGTTAGGTT+TGG | - | chr7.1:27088427-27088446 | MS.gene023787:CDS | 40.0% | |
CTCATGAGTATGCAAAAACC+GGG | - | chr7.1:27088551-27088570 | MS.gene023787:CDS | 40.0% | |
GACACCTTTCACTTACCATA+CGG | + | chr7.1:27088633-27088652 | None:intergenic | 40.0% | |
GCATGTTGACCCTATGTTTA+TGG | + | chr7.1:27088492-27088511 | None:intergenic | 40.0% | |
GCCTTGTAAACAGATTTGAG+AGG | + | chr7.1:27088761-27088780 | None:intergenic | 40.0% | |
GCTAGGGATCTATAATGTGA+AGG | - | chr7.1:27089336-27089355 | MS.gene023787:CDS | 40.0% | |
GCTGCAACGACATAATCATT+AGG | + | chr7.1:27088812-27088831 | None:intergenic | 40.0% | |
GGGATCTATAATGTGAAGGA+TGG | - | chr7.1:27089340-27089359 | MS.gene023787:CDS | 40.0% | |
GGGTTCAACCACAATTTCAA+TGG | - | chr7.1:27089455-27089474 | MS.gene023787:CDS | 40.0% | |
GTGAGTTTGATTCTAGGCTA+GGG | - | chr7.1:27089365-27089384 | MS.gene023787:CDS | 40.0% | |
TATCCCGTATGGTAAGTGAA+AGG | - | chr7.1:27088626-27088645 | MS.gene023787:CDS | 40.0% | |
TATGTCGTTGCAGCCATTTA+CGG | - | chr7.1:27088818-27088837 | MS.gene023787:CDS | 40.0% | |
TCCTCAAAGACCAATGGTAT+TGG | - | chr7.1:27088527-27088546 | MS.gene023787:CDS | 40.0% | |
TTCCAACTTGGAGAAACAAG+AGG | + | chr7.1:27089278-27089297 | None:intergenic | 40.0% | |
! | AACCTCTTGTTTCTCCAAGT+TGG | - | chr7.1:27089273-27089292 | MS.gene023787:CDS | 40.0% |
! | TCTTTGAGGATCAGGATCAT+TGG | + | chr7.1:27088517-27088536 | None:intergenic | 40.0% |
!! | ACCAATACCATTGGTCTTTG+AGG | + | chr7.1:27088531-27088550 | None:intergenic | 40.0% |
!! | ATGGTAAGTGAAAGGTGTCT+GGG | - | chr7.1:27088634-27088653 | MS.gene023787:CDS | 40.0% |
!! | TATGGTAAGTGAAAGGTGTC+TGG | - | chr7.1:27088633-27088652 | MS.gene023787:CDS | 40.0% |
AGGATACAATGGTGTGTCCA+TGG | + | chr7.1:27088952-27088971 | None:intergenic | 45.0% | |
CAACCCAATGCTACGATGAA+AGG | - | chr7.1:27089059-27089078 | MS.gene023787:intron | 45.0% | |
GCGACTTAGAATGCCATACA+AGG | + | chr7.1:27088584-27088603 | None:intergenic | 45.0% | |
TCATATGAGTCATCGCAAGG+AGG | + | chr7.1:27088989-27089008 | None:intergenic | 45.0% | |
TCCTGATCCTCAAAGACCAA+TGG | - | chr7.1:27088521-27088540 | MS.gene023787:CDS | 45.0% | |
TGTGAAGGATGGAAGCTTTC+GGG | - | chr7.1:27089396-27089415 | MS.gene023787:CDS | 45.0% | |
TTGAGAGGTGGCAGACTAAT+GGG | + | chr7.1:27088746-27088765 | None:intergenic | 45.0% | |
TTGAGGATCAGGATCATTGG+TGG | + | chr7.1:27088514-27088533 | None:intergenic | 45.0% | |
TTTGAGAGGTGGCAGACTAA+TGG | + | chr7.1:27088747-27088766 | None:intergenic | 45.0% | |
! | CTGATATTTGCTGACAGCCA+TGG | - | chr7.1:27088932-27088951 | MS.gene023787:CDS | 45.0% |
! | CTTTCATCGTAGCATTGGGT+TGG | + | chr7.1:27089061-27089080 | None:intergenic | 45.0% |
!! | AAAGAGCACGCCAACCATTT+TGG | - | chr7.1:27088861-27088880 | MS.gene023787:CDS | 45.0% |
!! | ACCATTGGTCTTTGAGGATC+AGG | + | chr7.1:27088525-27088544 | None:intergenic | 45.0% |
ACCGGGAAGAGATCCTTGTA+TGG | - | chr7.1:27088568-27088587 | MS.gene023787:CDS | 50.0% | |
AGGTGTCTGGGCTCTTCATT+TGG | - | chr7.1:27088646-27088665 | MS.gene023787:CDS | 50.0% | |
GCCATACAAGGATCTCTTCC+CGG | + | chr7.1:27088572-27088591 | None:intergenic | 50.0% | |
GGGTCATATGAGTCATCGCA+AGG | + | chr7.1:27088992-27089011 | None:intergenic | 50.0% | |
GTCTGGGCTCTTCATTTGGT+TGG | - | chr7.1:27088650-27088669 | MS.gene023787:CDS | 50.0% | |
!! | TTGGTGTCGTGTGCAAGTCT+TGG | - | chr7.1:27088446-27088465 | MS.gene023787:CDS | 50.0% |
AGAGGTGGCAGACTAATGGG+AGG | + | chr7.1:27088743-27088762 | None:intergenic | 55.0% | |
TTGGAACTGGATGCCGAGAG+TGG | - | chr7.1:27089169-27089188 | MS.gene023787:intron | 55.0% | |
! | AGGGCTTGTAATGGGGTCAG+CGG | + | chr7.1:27088792-27088811 | None:intergenic | 55.0% |
! | TGTAATGGGGTCAGCGGACA+AGG | + | chr7.1:27088786-27088805 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 27088355 | 27089483 | 27088355 | ID=MS.gene023787 |
chr7.1 | mRNA | 27088355 | 27089483 | 27088355 | ID=MS.gene023787.t1;Parent=MS.gene023787 |
chr7.1 | exon | 27089202 | 27089483 | 27089202 | ID=MS.gene023787.t1.exon1;Parent=MS.gene023787.t1 |
chr7.1 | CDS | 27089202 | 27089483 | 27089202 | ID=cds.MS.gene023787.t1;Parent=MS.gene023787.t1 |
chr7.1 | exon | 27088355 | 27089059 | 27088355 | ID=MS.gene023787.t1.exon2;Parent=MS.gene023787.t1 |
chr7.1 | CDS | 27088355 | 27089059 | 27088355 | ID=cds.MS.gene023787.t1;Parent=MS.gene023787.t1 |
Gene Sequence |
Protein sequence |