Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023889.t1 | RHN46952.1 | 82.4 | 369 | 65 | 0 | 1 | 369 | 1 | 369 | 3.50E-172 | 614.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023889.t1 | G7L4M6 | 82.4 | 369 | 65 | 0 | 1 | 369 | 1 | 369 | 2.5e-172 | 614.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023889.t1 | MTR_7g077620 | 82.162 | 370 | 66 | 0 | 1 | 370 | 1 | 370 | 0.0 | 615 |
MS.gene023889.t1 | MTR_7g077650 | 67.282 | 379 | 110 | 6 | 1 | 372 | 1 | 372 | 5.52e-169 | 476 |
MS.gene023889.t1 | MTR_7g077660 | 65.535 | 383 | 106 | 7 | 1 | 372 | 1 | 368 | 2.35e-162 | 459 |
MS.gene023889.t1 | MTR_7g076100 | 62.500 | 264 | 97 | 2 | 110 | 372 | 38 | 300 | 9.76e-103 | 305 |
MS.gene023889.t1 | MTR_7g076100 | 75.926 | 54 | 12 | 1 | 1 | 53 | 1 | 54 | 2.13e-19 | 87.8 |
MS.gene023889.t1 | MTR_7g076110 | 55.743 | 296 | 120 | 5 | 85 | 372 | 21 | 313 | 3.77e-99 | 296 |
MS.gene023889.t1 | MTR_1g108740 | 45.383 | 379 | 163 | 15 | 1 | 370 | 1 | 344 | 1.63e-86 | 265 |
MS.gene023889.t1 | MTR_5g038260 | 43.358 | 399 | 178 | 17 | 3 | 372 | 4 | 383 | 1.06e-80 | 252 |
MS.gene023889.t1 | MTR_5g038230 | 41.371 | 394 | 159 | 16 | 5 | 370 | 4 | 353 | 3.07e-74 | 234 |
MS.gene023889.t1 | MTR_1g064570 | 39.808 | 417 | 186 | 15 | 3 | 372 | 2 | 400 | 2.05e-72 | 231 |
MS.gene023889.t1 | MTR_5g082770 | 45.659 | 311 | 133 | 8 | 5 | 305 | 4 | 288 | 5.99e-68 | 216 |
MS.gene023889.t1 | MTR_1g016150 | 47.087 | 206 | 103 | 5 | 1 | 203 | 1 | 203 | 8.50e-49 | 165 |
MS.gene023889.t1 | MTR_7g076130 | 63.710 | 124 | 44 | 1 | 168 | 290 | 25 | 148 | 1.53e-46 | 156 |
MS.gene023889.t1 | MTR_5g082780 | 40.254 | 236 | 109 | 8 | 115 | 337 | 2 | 218 | 1.85e-37 | 135 |
MS.gene023889.t1 | MTR_1g108750 | 44.937 | 158 | 47 | 5 | 5 | 159 | 4 | 124 | 3.28e-23 | 94.0 |
MS.gene023889.t1 | MTR_3g114970 | 25.189 | 397 | 219 | 17 | 4 | 368 | 3 | 353 | 7.82e-17 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 76 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAGGGGATGCTACCTCTT+TGG | 0.217719 | 7.1:-26078342 | MS.gene023889:CDS |
TTCTCAAAGTAAGTAAAATT+AGG | 0.221508 | 7.1:+26078745 | None:intergenic |
GTTGCAGCGATTTACGATTT+TGG | 0.237175 | 7.1:-26078937 | MS.gene023889:CDS |
CAAGGGGATGCTACCTCTTT+GGG | 0.256443 | 7.1:-26078341 | MS.gene023889:CDS |
AATCAACAAACTTGAGAGTT+TGG | 0.291432 | 7.1:-26078542 | MS.gene023889:CDS |
TTCCCATAACAACATTCTTC+TGG | 0.294293 | 7.1:+26078697 | None:intergenic |
CTTTAAAAGTAAAAGATGTT+TGG | 0.301037 | 7.1:-26079121 | MS.gene023889:CDS |
TTTCCAGAAGAATGTTGTTA+TGG | 0.307341 | 7.1:-26078700 | MS.gene023889:CDS |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.1:+26078964 | None:intergenic |
TTTAAAAGTAAAAGATGTTT+GGG | 0.344361 | 7.1:-26079120 | MS.gene023889:CDS |
TGTCTACGAGACAATTTGTT+TGG | 0.345267 | 7.1:+26079228 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.1:-26079347 | MS.gene023889:CDS |
GGAGGTATACTGCACTTAAA+AGG | 0.355148 | 7.1:+26079039 | None:intergenic |
TTCCAGAAGAATGTTGTTAT+GGG | 0.366004 | 7.1:-26078699 | MS.gene023889:CDS |
AGAAGACTACCCTCTTAGTT+TGG | 0.373113 | 7.1:-26079385 | MS.gene023889:CDS |
TCTCAAAGTAAGTAAAATTA+GGG | 0.380672 | 7.1:+26078746 | None:intergenic |
TTCGAGATGTGGCAGACTAA+TGG | 0.382028 | 7.1:+26079017 | None:intergenic |
AGCATCCCCTTGAAGGAAAC+TGG | 0.407501 | 7.1:+26078352 | None:intergenic |
ATCTTTACCAGTTTCCTTCA+AGG | 0.410653 | 7.1:-26078359 | MS.gene023889:CDS |
GGGTTCAACCACAATTTCAA+TGG | 0.412258 | 7.1:-26078321 | MS.gene023889:CDS |
AAAGAGCAAGCCAATCATCT+TGG | 0.415307 | 7.1:-26078900 | MS.gene023889:CDS |
AAAAGGATTCACTAGAGTTA+TGG | 0.416187 | 7.1:+26079056 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7.1:-26079342 | MS.gene023889:CDS |
GTCTACGAGACAATTTGTTT+GGG | 0.423564 | 7.1:+26079229 | None:intergenic |
TGGAGGATTGTTGAATTTGA+AGG | 0.425039 | 7.1:+26078786 | None:intergenic |
GAAGGATGGGATAACCGAAT+AGG | 0.427778 | 7.1:+26079147 | None:intergenic |
TCGAGATGTGGCAGACTAAT+GGG | 0.454439 | 7.1:+26079018 | None:intergenic |
GTGAGAAAGAGTACCCTATT+CGG | 0.459694 | 7.1:-26079161 | MS.gene023889:CDS |
TTGTTTCTCCAAGTTTGAAA+AGG | 0.460734 | 7.1:-26078467 | MS.gene023889:CDS |
AAGAGGTAGCATCCCCTTGA+AGG | 0.461379 | 7.1:+26078345 | None:intergenic |
AAGGATGGGATAACCGAATA+GGG | 0.474880 | 7.1:+26079148 | None:intergenic |
GGTTCAACCACAATTTCAAT+GGG | 0.475405 | 7.1:-26078320 | MS.gene023889:CDS |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.1:+26078963 | None:intergenic |
TTGTCAAGTACCAAACTAAG+AGG | 0.481598 | 7.1:+26079375 | None:intergenic |
AATCATTGACCGGAGACATA+TGG | 0.484616 | 7.1:-26078660 | MS.gene023889:CDS |
GGGTCATTTGAGTCATTACA+TGG | 0.486658 | 7.1:+26078766 | None:intergenic |
TTGGTGTGGTGTGCAAGAAT+TGG | 0.488283 | 7.1:-26079323 | MS.gene023889:CDS |
TCTTTACCAGTTTCCTTCAA+GGG | 0.496802 | 7.1:-26078358 | MS.gene023889:CDS |
TAGGGTACTCTTTCTCACTT+AGG | 0.497329 | 7.1:+26079166 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.1:-26078959 | MS.gene023889:CDS |
CAACACGAATCCAAGATGAT+TGG | 0.503058 | 7.1:+26078890 | None:intergenic |
CAAATCTATAATGCAAAGGA+TGG | 0.513573 | 7.1:-26078397 | MS.gene023889:CDS |
CTTCAGTGTCGGCAAATACC+AGG | 0.519382 | 7.1:+26078824 | None:intergenic |
GATCAATCCCATTGAAATTG+TGG | 0.519492 | 7.1:+26078313 | None:intergenic |
TTTCACCATCCATATGTCTC+CGG | 0.527974 | 7.1:+26078651 | None:intergenic |
GTTTGGGTTGTAGCCATGGT+TGG | 0.537462 | 7.1:-26079104 | MS.gene023889:CDS |
GCTGCAACCACATAATCACT+TGG | 0.549128 | 7.1:+26078952 | None:intergenic |
TACGAGACAATTTGTTTGGG+AGG | 0.550477 | 7.1:+26079232 | None:intergenic |
CCATGGTTGGCTTGCACTAG+CGG | 0.552229 | 7.1:-26079091 | MS.gene023889:CDS |
CTTTACCAGTTTCCTTCAAG+GGG | 0.552798 | 7.1:-26078357 | MS.gene023889:CDS |
AGATGTTTGGGTTGTAGCCA+TGG | 0.552870 | 7.1:-26079108 | MS.gene023889:CDS |
CTGGTATTTGCCGACACTGA+AGG | 0.560387 | 7.1:-26078823 | MS.gene023889:CDS |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.1:+26078978 | None:intergenic |
TAGTTTGGTACTTGACAAGT+TGG | 0.568728 | 7.1:-26079370 | MS.gene023889:CDS |
GGGAGGATCATTAGCATAGG+TGG | 0.579932 | 7.1:+26079249 | None:intergenic |
CTCTCACTTAATAATGAGGA+AGG | 0.580186 | 7.1:-26079424 | None:intergenic |
TTTGGGAGGATCATTAGCAT+AGG | 0.585383 | 7.1:+26079246 | None:intergenic |
AATTGTGGTTGAACCCAAAG+AGG | 0.588220 | 7.1:+26078328 | None:intergenic |
GTTTGTATGAAAGCTTCAGC+GGG | 0.599734 | 7.1:+26078614 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.1:+26078965 | None:intergenic |
GTTACAAATCTATAATGCAA+AGG | 0.608901 | 7.1:-26078401 | MS.gene023889:CDS |
CCGCTAGTGCAAGCCAACCA+TGG | 0.620838 | 7.1:+26079091 | None:intergenic |
AATGATGTCTCCTTCAGTGT+CGG | 0.624058 | 7.1:+26078813 | None:intergenic |
TTCAAACTTGGAGAAACAAG+AGG | 0.627779 | 7.1:+26078471 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.1:+26078953 | None:intergenic |
TTGTTGAGATGTTCGAGATG+TGG | 0.638398 | 7.1:+26079006 | None:intergenic |
GATTCACTAGAGTTATGGCA+TGG | 0.639478 | 7.1:+26079061 | None:intergenic |
AGTTTGTATGAAAGCTTCAG+CGG | 0.645095 | 7.1:+26078613 | None:intergenic |
GTAGACATGCAAAATCAAAG+AGG | 0.650836 | 7.1:-26079212 | MS.gene023889:CDS |
TGTCAAGTACCAAACTAAGA+GGG | 0.655940 | 7.1:+26079376 | None:intergenic |
AGATCATGTTAGGTTTGGTG+TGG | 0.661894 | 7.1:-26079337 | MS.gene023889:CDS |
TCATTTGAGTCATTACATGG+AGG | 0.686554 | 7.1:+26078769 | None:intergenic |
ATTGACCGGAGACATATGGA+TGG | 0.696827 | 7.1:-26078656 | MS.gene023889:CDS |
ACATCTCGAACATCTCAACA+AGG | 0.717549 | 7.1:-26079004 | MS.gene023889:CDS |
AGATGTGGCAGACTAATGGG+AGG | 0.724272 | 7.1:+26079021 | None:intergenic |
TTGGAACTAGACACCCAAAG+CGG | 0.762222 | 7.1:-26078577 | MS.gene023889:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCATAAAAATAATCAATTT+AGG | - | chr7.1:26078445-26078464 | MS.gene023889:CDS | 15.0% |
!! | TTTAAAAGTAAAAGATGTTT+GGG | - | chr7.1:26078606-26078625 | MS.gene023889:CDS | 15.0% |
!!! | ACTAATGTTGTATTTTATAA+AGG | - | chr7.1:26078879-26078898 | MS.gene023889:CDS | 15.0% |
!!! | TCAATTTATTTTATTCATCA+TGG | - | chr7.1:26079284-26079303 | MS.gene023889:CDS | 15.0% |
!!! | TCCTAAATTGATTATTTTTA+TGG | + | chr7.1:26078449-26078468 | None:intergenic | 15.0% |
!! | TCTCAAAGTAAGTAAAATTA+GGG | + | chr7.1:26078983-26079002 | None:intergenic | 20.0% |
!! | TTCTCAAAGTAAGTAAAATT+AGG | + | chr7.1:26078984-26079003 | None:intergenic | 20.0% |
!!! | ACATCTTTTACTTTTAAAGA+TGG | + | chr7.1:26078604-26078623 | None:intergenic | 20.0% |
!!! | CTTTAAAAGTAAAAGATGTT+TGG | - | chr7.1:26078605-26078624 | MS.gene023889:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+CGG | - | chr7.1:26079206-26079225 | MS.gene023889:CDS | 20.0% |
! | GTTACAAATCTATAATGCAA+AGG | - | chr7.1:26079325-26079344 | MS.gene023889:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr7.1:26079270-26079289 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr7.1:26079056-26079075 | MS.gene023889:CDS | 25.0% |
!!! | AACATTTTATTTGTCGGAAT+CGG | - | chr7.1:26079212-26079231 | MS.gene023889:CDS | 25.0% |
!!! | CAAACTCTTTGTTTTCAAAT+TGG | - | chr7.1:26079130-26079149 | MS.gene023889:CDS | 25.0% |
!!! | CTTTTACTTTTAAAGATGGA+AGG | + | chr7.1:26078600-26078619 | None:intergenic | 25.0% |
AAAAGGATTCACTAGAGTTA+TGG | + | chr7.1:26078673-26078692 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | - | chr7.1:26078379-26078398 | MS.gene023889:CDS | 30.0% | |
AATCAACAAACTTGAGAGTT+TGG | - | chr7.1:26079184-26079203 | MS.gene023889:CDS | 30.0% | |
CAAATCTATAATGCAAAGGA+TGG | - | chr7.1:26079329-26079348 | MS.gene023889:CDS | 30.0% | |
TTCCAGAAGAATGTTGTTAT+GGG | - | chr7.1:26079027-26079046 | MS.gene023889:CDS | 30.0% | |
TTTCCAGAAGAATGTTGTTA+TGG | - | chr7.1:26079026-26079045 | MS.gene023889:CDS | 30.0% | |
! | TGTTGTATTTTATAAAGGCC+TGG | - | chr7.1:26078884-26078903 | MS.gene023889:CDS | 30.0% |
! | TTGTTTCTCCAAGTTTGAAA+AGG | - | chr7.1:26079259-26079278 | MS.gene023889:CDS | 30.0% |
!! | ACTTTTAAAGATGGAAGGAT+GGG | + | chr7.1:26078595-26078614 | None:intergenic | 30.0% |
!! | TACTTTTAAAGATGGAAGGA+TGG | + | chr7.1:26078596-26078615 | None:intergenic | 30.0% |
AGTTTGTATGAAAGCTTCAG+CGG | + | chr7.1:26079116-26079135 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.1:26078766-26078785 | None:intergenic | 35.0% | |
ATCTTTACCAGTTTCCTTCA+AGG | - | chr7.1:26079367-26079386 | MS.gene023889:CDS | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.1:26078384-26078403 | MS.gene023889:CDS | 35.0% | |
GGTTCAACCACAATTTCAAT+GGG | - | chr7.1:26079406-26079425 | MS.gene023889:CDS | 35.0% | |
GTAGACATGCAAAATCAAAG+AGG | - | chr7.1:26078514-26078533 | MS.gene023889:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.1:26078765-26078784 | None:intergenic | 35.0% | |
TAGTTTGGTACTTGACAAGT+TGG | - | chr7.1:26078356-26078375 | MS.gene023889:CDS | 35.0% | |
TCATTTGAGTCATTACATGG+AGG | + | chr7.1:26078960-26078979 | None:intergenic | 35.0% | |
TCTTTACCAGTTTCCTTCAA+GGG | - | chr7.1:26079368-26079387 | MS.gene023889:CDS | 35.0% | |
TGGAGGATTGTTGAATTTGA+AGG | + | chr7.1:26078943-26078962 | None:intergenic | 35.0% | |
TGTCAAGTACCAAACTAAGA+GGG | + | chr7.1:26078353-26078372 | None:intergenic | 35.0% | |
TTCAAACTTGGAGAAACAAG+AGG | + | chr7.1:26079258-26079277 | None:intergenic | 35.0% | |
TTCCCATAACAACATTCTTC+TGG | + | chr7.1:26079032-26079051 | None:intergenic | 35.0% | |
TTGTCAAGTACCAAACTAAG+AGG | + | chr7.1:26078354-26078373 | None:intergenic | 35.0% | |
! | GTCTACGAGACAATTTGTTT+GGG | + | chr7.1:26078500-26078519 | None:intergenic | 35.0% |
! | TGTCTACGAGACAATTTGTT+TGG | + | chr7.1:26078501-26078520 | None:intergenic | 35.0% |
! | TTGTTCAACTTTTCCGCTTT+GGG | + | chr7.1:26079165-26079184 | None:intergenic | 35.0% |
! | TTTGTTCAACTTTTCCGCTT+TGG | + | chr7.1:26079166-26079185 | None:intergenic | 35.0% |
AAAGAGCAAGCCAATCATCT+TGG | - | chr7.1:26078826-26078845 | MS.gene023889:CDS | 40.0% | |
AAGGATGGGATAACCGAATA+GGG | + | chr7.1:26078581-26078600 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.1:26078764-26078783 | None:intergenic | 40.0% | |
AATCATTGACCGGAGACATA+TGG | - | chr7.1:26079066-26079085 | MS.gene023889:CDS | 40.0% | |
AATGATGTCTCCTTCAGTGT+CGG | + | chr7.1:26078916-26078935 | None:intergenic | 40.0% | |
AATTGTGGTTGAACCCAAAG+AGG | + | chr7.1:26079401-26079420 | None:intergenic | 40.0% | |
ACATCTCGAACATCTCAACA+AGG | - | chr7.1:26078722-26078741 | MS.gene023889:CDS | 40.0% | |
AGAAGACTACCCTCTTAGTT+TGG | - | chr7.1:26078341-26078360 | MS.gene023889:CDS | 40.0% | |
CAACACGAATCCAAGATGAT+TGG | + | chr7.1:26078839-26078858 | None:intergenic | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.1:26078776-26078795 | None:intergenic | 40.0% | |
CTTTACCAGTTTCCTTCAAG+GGG | - | chr7.1:26079369-26079388 | MS.gene023889:CDS | 40.0% | |
GATTCACTAGAGTTATGGCA+TGG | + | chr7.1:26078668-26078687 | None:intergenic | 40.0% | |
GGGTCATTTGAGTCATTACA+TGG | + | chr7.1:26078963-26078982 | None:intergenic | 40.0% | |
GGGTTCAACCACAATTTCAA+TGG | - | chr7.1:26079405-26079424 | MS.gene023889:CDS | 40.0% | |
GTTTGTATGAAAGCTTCAGC+GGG | + | chr7.1:26079115-26079134 | None:intergenic | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.1:26078767-26078786 | MS.gene023889:CDS | 40.0% | |
TTGTTGAGATGTTCGAGATG+TGG | + | chr7.1:26078723-26078742 | None:intergenic | 40.0% | |
TTTCACCATCCATATGTCTC+CGG | + | chr7.1:26079078-26079097 | None:intergenic | 40.0% | |
TTTGGGAGGATCATTAGCAT+AGG | + | chr7.1:26078483-26078502 | None:intergenic | 40.0% | |
! | GGAGGTATACTGCACTTAAA+AGG | + | chr7.1:26078690-26078709 | None:intergenic | 40.0% |
! | GTTGCAGCGATTTACGATTT+TGG | - | chr7.1:26078789-26078808 | MS.gene023889:CDS | 40.0% |
! | TACGAGACAATTTGTTTGGG+AGG | + | chr7.1:26078497-26078516 | None:intergenic | 40.0% |
! | TAGGGTACTCTTTCTCACTT+AGG | + | chr7.1:26078563-26078582 | None:intergenic | 40.0% |
!! | AGATCATGTTAGGTTTGGTG+TGG | - | chr7.1:26078389-26078408 | MS.gene023889:CDS | 40.0% |
!! | GTGAGAAAGAGTACCCTATT+CGG | - | chr7.1:26078565-26078584 | MS.gene023889:CDS | 40.0% |
ATTGACCGGAGACATATGGA+TGG | - | chr7.1:26079070-26079089 | MS.gene023889:CDS | 45.0% | |
GAAGGATGGGATAACCGAAT+AGG | + | chr7.1:26078582-26078601 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | chr7.1:26078777-26078796 | None:intergenic | 45.0% | |
TCGAGATGTGGCAGACTAAT+GGG | + | chr7.1:26078711-26078730 | None:intergenic | 45.0% | |
TTCGAGATGTGGCAGACTAA+TGG | + | chr7.1:26078712-26078731 | None:intergenic | 45.0% | |
TTGGAACTAGACACCCAAAG+CGG | - | chr7.1:26079149-26079168 | MS.gene023889:CDS | 45.0% | |
TTGGTGTGGTGTGCAAGAAT+TGG | - | chr7.1:26078403-26078422 | MS.gene023889:CDS | 45.0% | |
!! | AGATGTTTGGGTTGTAGCCA+TGG | - | chr7.1:26078618-26078637 | MS.gene023889:CDS | 45.0% |
AAGAGGTAGCATCCCCTTGA+AGG | + | chr7.1:26079384-26079403 | None:intergenic | 50.0% | |
AGATGTGGCAGACTAATGGG+AGG | + | chr7.1:26078708-26078727 | None:intergenic | 50.0% | |
AGCATCCCCTTGAAGGAAAC+TGG | + | chr7.1:26079377-26079396 | None:intergenic | 50.0% | |
CAAGGGGATGCTACCTCTTT+GGG | - | chr7.1:26079385-26079404 | MS.gene023889:CDS | 50.0% | |
CTGGTATTTGCCGACACTGA+AGG | - | chr7.1:26078903-26078922 | MS.gene023889:CDS | 50.0% | |
GGGAGGATCATTAGCATAGG+TGG | + | chr7.1:26078480-26078499 | None:intergenic | 50.0% | |
TCAAGGGGATGCTACCTCTT+TGG | - | chr7.1:26079384-26079403 | MS.gene023889:CDS | 50.0% | |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.1:26078751-26078770 | None:intergenic | 50.0% |
!! | CTTCAGTGTCGGCAAATACC+AGG | + | chr7.1:26078905-26078924 | None:intergenic | 50.0% |
!! | GTTTGGGTTGTAGCCATGGT+TGG | - | chr7.1:26078622-26078641 | MS.gene023889:CDS | 50.0% |
!! | CCATGGTTGGCTTGCACTAG+CGG | - | chr7.1:26078635-26078654 | MS.gene023889:CDS | 55.0% |
CCGCTAGTGCAAGCCAACCA+TGG | + | chr7.1:26078638-26078657 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 26078315 | 26079433 | 26078315 | ID=MS.gene023889 |
chr7.1 | mRNA | 26078315 | 26079433 | 26078315 | ID=MS.gene023889.t1;Parent=MS.gene023889 |
chr7.1 | exon | 26078315 | 26079433 | 26078315 | ID=MS.gene023889.t1.exon1;Parent=MS.gene023889.t1 |
chr7.1 | CDS | 26078315 | 26079433 | 26078315 | ID=cds.MS.gene023889.t1;Parent=MS.gene023889.t1 |
Gene Sequence |
Protein sequence |