Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27749.t1 | RHN46952.1 | 81.6 | 369 | 68 | 0 | 1 | 369 | 1 | 369 | 3.90E-171 | 610.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27749.t1 | G7L4M6 | 81.6 | 369 | 68 | 0 | 1 | 369 | 1 | 369 | 2.8e-171 | 610.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27749.t1 | MTR_7g077620 | 81.351 | 370 | 69 | 0 | 1 | 370 | 1 | 370 | 0.0 | 611 |
MS.gene27749.t1 | MTR_7g077650 | 67.018 | 379 | 111 | 6 | 1 | 372 | 1 | 372 | 4.92e-168 | 474 |
MS.gene27749.t1 | MTR_7g077660 | 64.752 | 383 | 109 | 7 | 1 | 372 | 1 | 368 | 5.98e-161 | 456 |
MS.gene27749.t1 | MTR_7g076100 | 61.364 | 264 | 100 | 2 | 110 | 372 | 38 | 300 | 2.29e-101 | 302 |
MS.gene27749.t1 | MTR_7g076100 | 75.926 | 54 | 12 | 1 | 1 | 53 | 1 | 54 | 2.07e-19 | 87.8 |
MS.gene27749.t1 | MTR_7g076110 | 55.405 | 296 | 121 | 5 | 85 | 372 | 21 | 313 | 6.15e-99 | 296 |
MS.gene27749.t1 | MTR_1g108740 | 44.591 | 379 | 166 | 15 | 1 | 370 | 1 | 344 | 3.00e-85 | 262 |
MS.gene27749.t1 | MTR_5g038260 | 42.857 | 399 | 180 | 17 | 3 | 372 | 4 | 383 | 3.77e-80 | 250 |
MS.gene27749.t1 | MTR_5g038230 | 40.863 | 394 | 161 | 16 | 5 | 370 | 4 | 353 | 1.06e-73 | 233 |
MS.gene27749.t1 | MTR_1g064570 | 39.329 | 417 | 188 | 15 | 3 | 372 | 2 | 400 | 7.74e-72 | 229 |
MS.gene27749.t1 | MTR_5g082770 | 45.338 | 311 | 134 | 8 | 5 | 305 | 4 | 288 | 8.83e-68 | 216 |
MS.gene27749.t1 | MTR_1g016150 | 46.602 | 206 | 104 | 5 | 1 | 203 | 1 | 203 | 2.39e-48 | 164 |
MS.gene27749.t1 | MTR_7g076130 | 62.097 | 124 | 46 | 1 | 168 | 290 | 25 | 148 | 1.12e-45 | 154 |
MS.gene27749.t1 | MTR_5g082780 | 40.678 | 236 | 108 | 8 | 115 | 337 | 2 | 218 | 1.97e-38 | 137 |
MS.gene27749.t1 | MTR_1g108750 | 44.304 | 158 | 48 | 5 | 5 | 159 | 4 | 124 | 1.05e-22 | 92.4 |
MS.gene27749.t1 | MTR_3g114970 | 24.433 | 397 | 222 | 16 | 4 | 368 | 3 | 353 | 1.40e-16 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 78 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAGGGGATGCTACCTCTT+TGG | 0.217719 | 7.3:-29183197 | MS.gene27749:CDS |
TTCTCAAAGTAAGTAAAATT+AGG | 0.221508 | 7.3:+29183600 | None:intergenic |
GTTGCAGCGATTTACGATTT+TGG | 0.237175 | 7.3:-29183792 | MS.gene27749:CDS |
CAAGGGGATGCTACCTCTTT+GGG | 0.256443 | 7.3:-29183196 | MS.gene27749:CDS |
AATCAACAAACTTGAGAGTT+TGG | 0.291432 | 7.3:-29183397 | MS.gene27749:CDS |
TTCCCATAACAACATTCTTC+TGG | 0.294293 | 7.3:+29183552 | None:intergenic |
CTTTAAAAGTAAAAGATGTT+TGG | 0.301037 | 7.3:-29183976 | MS.gene27749:CDS |
TTTCCAGAAGAATGTTGTTA+TGG | 0.307341 | 7.3:-29183555 | MS.gene27749:CDS |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.3:+29183819 | None:intergenic |
TTTAAAAGTAAAAGATGTTT+GGG | 0.344361 | 7.3:-29183975 | MS.gene27749:CDS |
TGTCTACGAGACAATTTGTT+TGG | 0.345267 | 7.3:+29184083 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.3:-29184202 | MS.gene27749:CDS |
GGAGGTATACTGCACTTAAA+AGG | 0.355148 | 7.3:+29183894 | None:intergenic |
TTCCAGAAGAATGTTGTTAT+GGG | 0.366004 | 7.3:-29183554 | MS.gene27749:CDS |
AGAAGACTACCCTCTTAGTT+TGG | 0.373113 | 7.3:-29184240 | MS.gene27749:CDS |
TCTCAAAGTAAGTAAAATTA+GGG | 0.380672 | 7.3:+29183601 | None:intergenic |
TTCGAGATGTGGCAGACTAA+TGG | 0.382028 | 7.3:+29183872 | None:intergenic |
ATCTTTACCGGTTTCCTTCA+AGG | 0.385042 | 7.3:-29183214 | MS.gene27749:CDS |
GGGTTCAACCACAATTTCAA+TGG | 0.412258 | 7.3:-29183176 | MS.gene27749:CDS |
AAAGAGCAAGCCAATCATCT+TGG | 0.415307 | 7.3:-29183755 | MS.gene27749:CDS |
AAAAGGATTCACTAGAGTTA+TGG | 0.416187 | 7.3:+29183911 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7.3:-29184197 | MS.gene27749:CDS |
GTCTACGAGACAATTTGTTT+GGG | 0.423564 | 7.3:+29184084 | None:intergenic |
TTTACGTAGTCAATCTTTAC+CGG | 0.424802 | 7.3:-29183226 | MS.gene27749:CDS |
TGGAGGATTGTTGAATTTGA+AGG | 0.425039 | 7.3:+29183641 | None:intergenic |
GAAGGATGGGATAACCGAAT+AGG | 0.427778 | 7.3:+29184002 | None:intergenic |
TCGAGATGTGGCAGACTAAT+GGG | 0.454439 | 7.3:+29183873 | None:intergenic |
AGCATCCCCTTGAAGGAAAC+CGG | 0.456643 | 7.3:+29183207 | None:intergenic |
GTGAGAAAGAGTACCCTATT+CGG | 0.459694 | 7.3:-29184016 | MS.gene27749:CDS |
TTGTTTCTCCAAGTTTGAAA+AGG | 0.460734 | 7.3:-29183322 | MS.gene27749:CDS |
AAGAGGTAGCATCCCCTTGA+AGG | 0.461379 | 7.3:+29183200 | None:intergenic |
AAGGATGGGATAACCGAATA+GGG | 0.474880 | 7.3:+29184003 | None:intergenic |
GGTTCAACCACAATTTCAAT+GGG | 0.475405 | 7.3:-29183175 | MS.gene27749:CDS |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.3:+29183818 | None:intergenic |
TTGTCAAGTACCAAACTAAG+AGG | 0.481598 | 7.3:+29184230 | None:intergenic |
TCTTTACCGGTTTCCTTCAA+GGG | 0.482100 | 7.3:-29183213 | MS.gene27749:CDS |
AATCATTGACCGGAGACATA+TGG | 0.484616 | 7.3:-29183515 | MS.gene27749:CDS |
GGGTCATTTGAGTCATTACA+TGG | 0.486658 | 7.3:+29183621 | None:intergenic |
TTGGTGTGGTGTGCAAGAAT+TGG | 0.488283 | 7.3:-29184178 | MS.gene27749:CDS |
TAGGGTACTCTTTCTCACTT+AGG | 0.497329 | 7.3:+29184021 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.3:-29183814 | MS.gene27749:CDS |
CAACACGAATCCAAGATGAT+TGG | 0.503058 | 7.3:+29183745 | None:intergenic |
CAAATCTATAATGCAAAGGA+TGG | 0.513573 | 7.3:-29183252 | MS.gene27749:CDS |
CTTCAGTGTCGGCAAATACC+AGG | 0.519382 | 7.3:+29183679 | None:intergenic |
GATCAATCCCATTGAAATTG+TGG | 0.519492 | 7.3:+29183168 | None:intergenic |
TTTCACCATCCATATGTCTC+CGG | 0.527974 | 7.3:+29183506 | None:intergenic |
GTTTGGGTTGTAGCCATGGT+TGG | 0.537462 | 7.3:-29183959 | MS.gene27749:CDS |
GGTCAGCAGACAAGGTAACC+TGG | 0.547547 | 7.3:+29183841 | None:intergenic |
GCTGCAACCACATAATCACT+TGG | 0.549128 | 7.3:+29183807 | None:intergenic |
TACGAGACAATTTGTTTGGG+AGG | 0.550477 | 7.3:+29184087 | None:intergenic |
CCATGGTTGGCTTGCACTAG+CGG | 0.552229 | 7.3:-29183946 | MS.gene27749:CDS |
AGATGTTTGGGTTGTAGCCA+TGG | 0.552870 | 7.3:-29183963 | MS.gene27749:CDS |
CTGGTATTTGCCGACACTGA+AGG | 0.560387 | 7.3:-29183678 | MS.gene27749:CDS |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.3:+29183833 | None:intergenic |
TAGTTTGGTACTTGACAAGT+TGG | 0.568728 | 7.3:-29184225 | MS.gene27749:CDS |
CTTTACCGGTTTCCTTCAAG+GGG | 0.575715 | 7.3:-29183212 | MS.gene27749:CDS |
GGGAGGATCATTAGCATAGG+TGG | 0.579932 | 7.3:+29184104 | None:intergenic |
CTCTCACTTAATAATGAGGA+AGG | 0.580186 | 7.3:-29184279 | None:intergenic |
TTTGGGAGGATCATTAGCAT+AGG | 0.585383 | 7.3:+29184101 | None:intergenic |
AATTGTGGTTGAACCCAAAG+AGG | 0.588220 | 7.3:+29183183 | None:intergenic |
GTTTGTATGAAAGCTTCAGC+GGG | 0.599734 | 7.3:+29183469 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.3:+29183820 | None:intergenic |
GTTACAAATCTATAATGCAA+AGG | 0.608901 | 7.3:-29183256 | MS.gene27749:CDS |
CCGCTAGTGCAAGCCAACCA+TGG | 0.620838 | 7.3:+29183946 | None:intergenic |
AATGATGTCTCCTTCAGTGT+CGG | 0.624058 | 7.3:+29183668 | None:intergenic |
TTCAAACTTGGAGAAACAAG+AGG | 0.627779 | 7.3:+29183326 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.3:+29183808 | None:intergenic |
GATTCACTAGAGTTATGGCA+TGG | 0.639478 | 7.3:+29183916 | None:intergenic |
AGTTTGTATGAAAGCTTCAG+CGG | 0.645095 | 7.3:+29183468 | None:intergenic |
GTAGACATGCAAAATCAAAG+AGG | 0.650836 | 7.3:-29184067 | MS.gene27749:CDS |
TGTCAAGTACCAAACTAAGA+GGG | 0.655940 | 7.3:+29184231 | None:intergenic |
AGATCATGTTAGGTTTGGTG+TGG | 0.661894 | 7.3:-29184192 | MS.gene27749:CDS |
TGGTTGAGATGTTCGAGATG+TGG | 0.667918 | 7.3:+29183861 | None:intergenic |
ACATCTCGAACATCTCAACC+AGG | 0.682124 | 7.3:-29183859 | MS.gene27749:CDS |
TCATTTGAGTCATTACATGG+AGG | 0.686554 | 7.3:+29183624 | None:intergenic |
ATTGACCGGAGACATATGGA+TGG | 0.696827 | 7.3:-29183511 | MS.gene27749:CDS |
AGATGTGGCAGACTAATGGG+AGG | 0.724272 | 7.3:+29183876 | None:intergenic |
TTGGAACTAGACACCCAAAG+CGG | 0.762222 | 7.3:-29183432 | MS.gene27749:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCATAAAAATAATCAATTT+AGG | - | chr7.3:29183300-29183319 | MS.gene27749:CDS | 15.0% |
!! | TTTAAAAGTAAAAGATGTTT+GGG | - | chr7.3:29183461-29183480 | MS.gene27749:CDS | 15.0% |
!!! | ACTAATGTTGTATTTTATAA+AGG | - | chr7.3:29183734-29183753 | MS.gene27749:CDS | 15.0% |
!!! | TCAATTTATTTTATTCATCA+TGG | - | chr7.3:29184139-29184158 | MS.gene27749:CDS | 15.0% |
!!! | TCCTAAATTGATTATTTTTA+TGG | + | chr7.3:29183304-29183323 | None:intergenic | 15.0% |
!! | TCTCAAAGTAAGTAAAATTA+GGG | + | chr7.3:29183838-29183857 | None:intergenic | 20.0% |
!! | TTCTCAAAGTAAGTAAAATT+AGG | + | chr7.3:29183839-29183858 | None:intergenic | 20.0% |
!!! | ACATCTTTTACTTTTAAAGA+TGG | + | chr7.3:29183459-29183478 | None:intergenic | 20.0% |
!!! | ATTATTTTTATGGTTAAGCT+TGG | + | chr7.3:29183294-29183313 | None:intergenic | 20.0% |
!!! | CAAACTCTTTATTTTCAAAT+TGG | - | chr7.3:29183985-29184004 | MS.gene27749:CDS | 20.0% |
!!! | CTTTAAAAGTAAAAGATGTT+TGG | - | chr7.3:29183460-29183479 | MS.gene27749:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+CGG | - | chr7.3:29184061-29184080 | MS.gene27749:CDS | 20.0% |
! | GTTACAAATCTATAATGCAA+AGG | - | chr7.3:29184180-29184199 | MS.gene27749:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr7.3:29184125-29184144 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr7.3:29183911-29183930 | MS.gene27749:CDS | 25.0% |
!!! | AACATTTTATTTGTCGGAAT+CGG | - | chr7.3:29184067-29184086 | MS.gene27749:CDS | 25.0% |
!!! | CTTTTACTTTTAAAGATGGA+AGG | + | chr7.3:29183455-29183474 | None:intergenic | 25.0% |
AAAAGGATTCACTAGAGTTA+TGG | + | chr7.3:29183528-29183547 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | - | chr7.3:29183234-29183253 | MS.gene27749:CDS | 30.0% | |
AATCAACAAACTTGAGAGTT+TGG | - | chr7.3:29184039-29184058 | MS.gene27749:CDS | 30.0% | |
CAAATCTATAATGCAAAGGA+TGG | - | chr7.3:29184184-29184203 | MS.gene27749:CDS | 30.0% | |
TTCCAGAAGAATGTTGTTAT+GGG | - | chr7.3:29183882-29183901 | MS.gene27749:CDS | 30.0% | |
TTTACGTAGTCAATCTTTAC+CGG | - | chr7.3:29184210-29184229 | MS.gene27749:CDS | 30.0% | |
TTTCCAGAAGAATGTTGTTA+TGG | - | chr7.3:29183881-29183900 | MS.gene27749:CDS | 30.0% | |
! | TGTTGTATTTTATAAAGGCC+TGG | - | chr7.3:29183739-29183758 | MS.gene27749:CDS | 30.0% |
! | TTGTTTCTCCAAGTTTGAAA+AGG | - | chr7.3:29184114-29184133 | MS.gene27749:CDS | 30.0% |
!! | ACTTTTAAAGATGGAAGGAT+GGG | + | chr7.3:29183450-29183469 | None:intergenic | 30.0% |
!! | TACTTTTAAAGATGGAAGGA+TGG | + | chr7.3:29183451-29183470 | None:intergenic | 30.0% |
!! | TTGTTTAACTTTTCCGCTTT+GGG | + | chr7.3:29184020-29184039 | None:intergenic | 30.0% |
!! | TTTGTTTAACTTTTCCGCTT+TGG | + | chr7.3:29184021-29184040 | None:intergenic | 30.0% |
AGTTTGTATGAAAGCTTCAG+CGG | + | chr7.3:29183971-29183990 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.3:29183621-29183640 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.3:29183239-29183258 | MS.gene27749:CDS | 35.0% | |
GGTTCAACCACAATTTCAAT+GGG | - | chr7.3:29184261-29184280 | MS.gene27749:CDS | 35.0% | |
GTAGACATGCAAAATCAAAG+AGG | - | chr7.3:29183369-29183388 | MS.gene27749:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.3:29183620-29183639 | None:intergenic | 35.0% | |
TAGTTTGGTACTTGACAAGT+TGG | - | chr7.3:29183211-29183230 | MS.gene27749:CDS | 35.0% | |
TCATTTGAGTCATTACATGG+AGG | + | chr7.3:29183815-29183834 | None:intergenic | 35.0% | |
TGGAGGATTGTTGAATTTGA+AGG | + | chr7.3:29183798-29183817 | None:intergenic | 35.0% | |
TGTCAAGTACCAAACTAAGA+GGG | + | chr7.3:29183208-29183227 | None:intergenic | 35.0% | |
TTCAAACTTGGAGAAACAAG+AGG | + | chr7.3:29184113-29184132 | None:intergenic | 35.0% | |
TTCCCATAACAACATTCTTC+TGG | + | chr7.3:29183887-29183906 | None:intergenic | 35.0% | |
TTGTCAAGTACCAAACTAAG+AGG | + | chr7.3:29183209-29183228 | None:intergenic | 35.0% | |
! | GTCTACGAGACAATTTGTTT+GGG | + | chr7.3:29183355-29183374 | None:intergenic | 35.0% |
! | TGTCTACGAGACAATTTGTT+TGG | + | chr7.3:29183356-29183375 | None:intergenic | 35.0% |
AAAGAGCAAGCCAATCATCT+TGG | - | chr7.3:29183681-29183700 | MS.gene27749:CDS | 40.0% | |
AAGGATGGGATAACCGAATA+GGG | + | chr7.3:29183436-29183455 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.3:29183619-29183638 | None:intergenic | 40.0% | |
AATCATTGACCGGAGACATA+TGG | - | chr7.3:29183921-29183940 | MS.gene27749:CDS | 40.0% | |
AATGATGTCTCCTTCAGTGT+CGG | + | chr7.3:29183771-29183790 | None:intergenic | 40.0% | |
AATTGTGGTTGAACCCAAAG+AGG | + | chr7.3:29184256-29184275 | None:intergenic | 40.0% | |
AGAAGACTACCCTCTTAGTT+TGG | - | chr7.3:29183196-29183215 | MS.gene27749:CDS | 40.0% | |
CAACACGAATCCAAGATGAT+TGG | + | chr7.3:29183694-29183713 | None:intergenic | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.3:29183631-29183650 | None:intergenic | 40.0% | |
GATTCACTAGAGTTATGGCA+TGG | + | chr7.3:29183523-29183542 | None:intergenic | 40.0% | |
GGGTCATTTGAGTCATTACA+TGG | + | chr7.3:29183818-29183837 | None:intergenic | 40.0% | |
GGGTTCAACCACAATTTCAA+TGG | - | chr7.3:29184260-29184279 | MS.gene27749:CDS | 40.0% | |
GTTTGTATGAAAGCTTCAGC+GGG | + | chr7.3:29183970-29183989 | None:intergenic | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.3:29183622-29183641 | MS.gene27749:CDS | 40.0% | |
TTTCACCATCCATATGTCTC+CGG | + | chr7.3:29183933-29183952 | None:intergenic | 40.0% | |
TTTGGGAGGATCATTAGCAT+AGG | + | chr7.3:29183338-29183357 | None:intergenic | 40.0% | |
! | GGAGGTATACTGCACTTAAA+AGG | + | chr7.3:29183545-29183564 | None:intergenic | 40.0% |
! | GTTGCAGCGATTTACGATTT+TGG | - | chr7.3:29183644-29183663 | MS.gene27749:CDS | 40.0% |
! | TACGAGACAATTTGTTTGGG+AGG | + | chr7.3:29183352-29183371 | None:intergenic | 40.0% |
! | TAGGGTACTCTTTCTCACTT+AGG | + | chr7.3:29183418-29183437 | None:intergenic | 40.0% |
!! | AGATCATGTTAGGTTTGGTG+TGG | - | chr7.3:29183244-29183263 | MS.gene27749:CDS | 40.0% |
!! | ATCTTTACCGGTTTCCTTCA+AGG | - | chr7.3:29184222-29184241 | MS.gene27749:CDS | 40.0% |
!! | GTGAGAAAGAGTACCCTATT+CGG | - | chr7.3:29183420-29183439 | MS.gene27749:CDS | 40.0% |
!! | TCTTTACCGGTTTCCTTCAA+GGG | - | chr7.3:29184223-29184242 | MS.gene27749:CDS | 40.0% |
ACATCTCGAACATCTCAACC+AGG | - | chr7.3:29183577-29183596 | MS.gene27749:CDS | 45.0% | |
ATTGACCGGAGACATATGGA+TGG | - | chr7.3:29183925-29183944 | MS.gene27749:CDS | 45.0% | |
GAAGGATGGGATAACCGAAT+AGG | + | chr7.3:29183437-29183456 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | chr7.3:29183632-29183651 | None:intergenic | 45.0% | |
TCGAGATGTGGCAGACTAAT+GGG | + | chr7.3:29183566-29183585 | None:intergenic | 45.0% | |
TGGTTGAGATGTTCGAGATG+TGG | + | chr7.3:29183578-29183597 | None:intergenic | 45.0% | |
TTCGAGATGTGGCAGACTAA+TGG | + | chr7.3:29183567-29183586 | None:intergenic | 45.0% | |
TTGGAACTAGACACCCAAAG+CGG | - | chr7.3:29184004-29184023 | MS.gene27749:CDS | 45.0% | |
TTGGTGTGGTGTGCAAGAAT+TGG | - | chr7.3:29183258-29183277 | MS.gene27749:CDS | 45.0% | |
!! | AGATGTTTGGGTTGTAGCCA+TGG | - | chr7.3:29183473-29183492 | MS.gene27749:CDS | 45.0% |
!! | CTTTACCGGTTTCCTTCAAG+GGG | - | chr7.3:29184224-29184243 | MS.gene27749:CDS | 45.0% |
AAGAGGTAGCATCCCCTTGA+AGG | + | chr7.3:29184239-29184258 | None:intergenic | 50.0% | |
AGATGTGGCAGACTAATGGG+AGG | + | chr7.3:29183563-29183582 | None:intergenic | 50.0% | |
AGCATCCCCTTGAAGGAAAC+CGG | + | chr7.3:29184232-29184251 | None:intergenic | 50.0% | |
CAAGGGGATGCTACCTCTTT+GGG | - | chr7.3:29184240-29184259 | MS.gene27749:CDS | 50.0% | |
CTGGTATTTGCCGACACTGA+AGG | - | chr7.3:29183758-29183777 | MS.gene27749:CDS | 50.0% | |
GGGAGGATCATTAGCATAGG+TGG | + | chr7.3:29183335-29183354 | None:intergenic | 50.0% | |
TCAAGGGGATGCTACCTCTT+TGG | - | chr7.3:29184239-29184258 | MS.gene27749:CDS | 50.0% | |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.3:29183606-29183625 | None:intergenic | 50.0% |
!! | CTTCAGTGTCGGCAAATACC+AGG | + | chr7.3:29183760-29183779 | None:intergenic | 50.0% |
!! | GTTTGGGTTGTAGCCATGGT+TGG | - | chr7.3:29183477-29183496 | MS.gene27749:CDS | 50.0% |
GGTCAGCAGACAAGGTAACC+TGG | + | chr7.3:29183598-29183617 | None:intergenic | 55.0% | |
!! | CCATGGTTGGCTTGCACTAG+CGG | - | chr7.3:29183490-29183509 | MS.gene27749:CDS | 55.0% |
CCGCTAGTGCAAGCCAACCA+TGG | + | chr7.3:29183493-29183512 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 29183170 | 29184288 | 29183170 | ID=MS.gene27749 |
chr7.3 | mRNA | 29183170 | 29184288 | 29183170 | ID=MS.gene27749.t1;Parent=MS.gene27749 |
chr7.3 | exon | 29183170 | 29184288 | 29183170 | ID=MS.gene27749.t1.exon1;Parent=MS.gene27749.t1 |
chr7.3 | CDS | 29183170 | 29184288 | 29183170 | ID=cds.MS.gene27749.t1;Parent=MS.gene27749.t1 |
Gene Sequence |
Protein sequence |