Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95450.t1 | RHN46952.1 | 67.2 | 372 | 119 | 3 | 1 | 372 | 1 | 369 | 2.00E-130 | 475.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95450.t1 | G7L4M6 | 67.2 | 372 | 119 | 3 | 1 | 372 | 1 | 369 | 1.4e-130 | 475.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95450.t1 | MTR_7g077620 | 67.204 | 372 | 119 | 3 | 1 | 372 | 1 | 369 | 3.50e-169 | 478 |
MS.gene95450.t1 | MTR_7g077650 | 64.042 | 381 | 122 | 6 | 1 | 375 | 1 | 372 | 4.56e-158 | 449 |
MS.gene95450.t1 | MTR_7g077660 | 63.926 | 377 | 125 | 5 | 1 | 375 | 1 | 368 | 1.83e-153 | 437 |
MS.gene95450.t1 | MTR_7g076110 | 55.219 | 297 | 122 | 6 | 86 | 375 | 21 | 313 | 4.81e-99 | 296 |
MS.gene95450.t1 | MTR_7g076100 | 63.713 | 237 | 84 | 2 | 139 | 375 | 66 | 300 | 3.88e-94 | 283 |
MS.gene95450.t1 | MTR_7g076100 | 78.000 | 50 | 11 | 0 | 4 | 53 | 5 | 54 | 2.20e-20 | 90.9 |
MS.gene95450.t1 | MTR_1g108740 | 45.288 | 382 | 162 | 16 | 1 | 373 | 1 | 344 | 9.96e-85 | 261 |
MS.gene95450.t1 | MTR_5g038260 | 39.801 | 402 | 191 | 15 | 3 | 375 | 4 | 383 | 6.72e-76 | 239 |
MS.gene95450.t1 | MTR_5g082770 | 46.474 | 312 | 131 | 8 | 5 | 307 | 4 | 288 | 2.50e-73 | 230 |
MS.gene95450.t1 | MTR_5g038230 | 38.734 | 395 | 171 | 15 | 5 | 373 | 4 | 353 | 1.31e-70 | 225 |
MS.gene95450.t1 | MTR_1g064570 | 38.333 | 420 | 191 | 16 | 3 | 375 | 2 | 400 | 1.04e-66 | 216 |
MS.gene95450.t1 | MTR_7g076130 | 69.600 | 125 | 38 | 0 | 168 | 292 | 24 | 148 | 5.69e-54 | 175 |
MS.gene95450.t1 | MTR_1g016150 | 49.474 | 190 | 88 | 6 | 1 | 185 | 1 | 187 | 2.27e-47 | 161 |
MS.gene95450.t1 | MTR_1g016150 | 61.538 | 65 | 19 | 2 | 257 | 321 | 177 | 235 | 9.99e-13 | 67.8 |
MS.gene95450.t1 | MTR_5g082780 | 38.298 | 235 | 109 | 9 | 120 | 340 | 6 | 218 | 9.48e-34 | 125 |
MS.gene95450.t1 | MTR_1g108750 | 43.949 | 157 | 51 | 5 | 5 | 160 | 4 | 124 | 2.85e-22 | 91.3 |
MS.gene95450.t1 | MTR_3g114970 | 24.021 | 383 | 210 | 17 | 1 | 352 | 1 | 333 | 5.22e-13 | 69.7 |
MS.gene95450.t1 | MTR_3g114990 | 23.929 | 397 | 221 | 16 | 3 | 352 | 21 | 383 | 3.22e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 72 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGAGCAAGCCAATCATTT+TGG | 0.214143 | 7.4:-80870022 | MS.gene95450:CDS |
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7.4:+80869867 | None:intergenic |
AGGAGGATTATTGAACTTAA+AGG | 0.273304 | 7.4:+80869908 | None:intergenic |
AATGAACAAACTTGAGAGTT+TGG | 0.291432 | 7.4:-80869661 | MS.gene95450:CDS |
TACTCACTTGGGCTTGTAAT+CGG | 0.312123 | 7.4:+80870086 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.4:-80870472 | MS.gene95450:CDS |
TTCGAGAGGTGGCAAACTAA+TGG | 0.352493 | 7.4:+80870139 | None:intergenic |
GATCTTTACCCCGTCCCTTC+AGG | 0.356454 | 7.4:-80869476 | MS.gene95450:CDS |
AACGACCTTCACCATAGCTT+TGG | 0.364212 | 7.4:+80869814 | None:intergenic |
CAAGAACATGAGTGTGTGTT+TGG | 0.364316 | 7.4:-80870243 | MS.gene95450:CDS |
AGAAGCCTATCCTCTTAGTT+TGG | 0.365278 | 7.4:-80870510 | MS.gene95450:CDS |
TGATGTTTACAAATTAAAAC+TGG | 0.368827 | 7.4:-80869709 | MS.gene95450:CDS |
CAAGGATGGGATAACTGAAT+AGG | 0.377070 | 7.4:+80870269 | None:intergenic |
TAGCAATGGGGAAGTTAGAT+TGG | 0.377310 | 7.4:-80870541 | None:intergenic |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7.4:+80869868 | None:intergenic |
TCGAGAGGTGGCAAACTAAT+GGG | 0.396706 | 7.4:+80870140 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.400301 | 7.4:-80870467 | MS.gene95450:CDS |
GGGTTCTACCACAATTTCAA+TGG | 0.408660 | 7.4:-80869437 | MS.gene95450:CDS |
ACGACCTTCACCATAGCTTT+GGG | 0.423915 | 7.4:+80869815 | None:intergenic |
CGCCTCTGCTTTCTCCAAGA+TGG | 0.446470 | 7.4:-80869589 | MS.gene95450:CDS |
ACTCACTTGGGCTTGTAATC+GGG | 0.449180 | 7.4:+80870087 | None:intergenic |
AAGGATGGGATAACTGAATA+GGG | 0.462191 | 7.4:+80870270 | None:intergenic |
TTGGCGTGGTGTGCAAGAAT+TGG | 0.475029 | 7.4:-80870448 | MS.gene95450:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7.4:-80869436 | MS.gene95450:CDS |
CTGGTATTTGCTGACAACCT+TGG | 0.497796 | 7.4:-80869945 | MS.gene95450:CDS |
AGCAATGGGGAAGTTAGATT+GGG | 0.499131 | 7.4:-80870540 | None:intergenic |
AAGAACATGAGTGTGTGTTT+GGG | 0.500810 | 7.4:-80870242 | MS.gene95450:CDS |
TCATGTTCTTGATGCAAGGA+TGG | 0.501083 | 7.4:+80870255 | None:intergenic |
TAGTTTGGTACTTGATAAGT+TGG | 0.501505 | 7.4:-80870495 | MS.gene95450:CDS |
GTGTGTTTGGGCTTTAGCCA+TGG | 0.507415 | 7.4:-80870230 | MS.gene95450:CDS |
TAGCATCTTCCTGAAGGGAC+GGG | 0.508712 | 7.4:+80869467 | None:intergenic |
CTACACGGATCCAAAATGAT+TGG | 0.509049 | 7.4:+80870012 | None:intergenic |
CCTTCACCATAGCTTTGGGC+TGG | 0.509210 | 7.4:+80869819 | None:intergenic |
GTTTGGGCTTTAGCCATGGT+TGG | 0.511722 | 7.4:-80870226 | MS.gene95450:CDS |
TTATCAAGTACCAAACTAAG+AGG | 0.513488 | 7.4:+80870500 | None:intergenic |
AATCGTTGAATGGAGACATA+TGG | 0.523073 | 7.4:-80869782 | MS.gene95450:CDS |
CATATCTATAATGCGGAGGA+TGG | 0.531607 | 7.4:-80869513 | MS.gene95450:CDS |
AGGATACAATGGTGCGTCCA+AGG | 0.537916 | 7.4:+80869928 | None:intergenic |
GCTGCAACCACATACTCACT+TGG | 0.539884 | 7.4:+80870074 | None:intergenic |
GTTGATGAAAGTGATAAAGA+TGG | 0.555094 | 7.4:-80869546 | MS.gene95450:CDS |
AAAATGTAGCATCTTCCTGA+AGG | 0.561599 | 7.4:+80869461 | None:intergenic |
AAGTACCAAACTAAGAGGAT+AGG | 0.568196 | 7.4:+80870505 | None:intergenic |
AGTGTTCCAGCCCAAAGCTA+TGG | 0.568256 | 7.4:-80869825 | MS.gene95450:CDS |
GTAGCATCTTCCTGAAGGGA+CGG | 0.568660 | 7.4:+80869466 | None:intergenic |
TACAAGCCCAAGTGAGTATG+TGG | 0.569105 | 7.4:-80870081 | MS.gene95450:CDS |
GGTCAATCCCATTGAAATTG+TGG | 0.574786 | 7.4:+80869429 | None:intergenic |
AGCATCTTCCTGAAGGGACG+GGG | 0.577537 | 7.4:+80869468 | None:intergenic |
ACCTCTCGAAAATATCAAGA+AGG | 0.578390 | 7.4:-80870126 | MS.gene95450:CDS |
TGTAATCGGGTCAGCAGACA+AGG | 0.580068 | 7.4:+80870100 | None:intergenic |
TACGATAATTTATGTATGAG+AGG | 0.585202 | 7.4:+80870357 | None:intergenic |
ACACTCATGTTCTTGATGCA+AGG | 0.588895 | 7.4:+80870251 | None:intergenic |
ATTGAACTTAAAGGATACAA+TGG | 0.590271 | 7.4:+80869917 | None:intergenic |
CATGTTCTTGATGCAAGGAT+GGG | 0.593302 | 7.4:+80870256 | None:intergenic |
GAGAGGATCATCAACAAAGG+TGG | 0.600429 | 7.4:+80870374 | None:intergenic |
GTTGCAGCGATTTACAATTG+TGG | 0.603650 | 7.4:-80870059 | MS.gene95450:CDS |
AGAGGATCATCAACAAAGGT+GGG | 0.609595 | 7.4:+80870375 | None:intergenic |
AAATGTAGCATCTTCCTGAA+GGG | 0.613321 | 7.4:+80869462 | None:intergenic |
TTCCATCTTGGAGAAAGCAG+AGG | 0.613967 | 7.4:+80869587 | None:intergenic |
CTGCAACCACATACTCACTT+GGG | 0.622251 | 7.4:+80870075 | None:intergenic |
AGATCATGTTAGGTTTGGCG+TGG | 0.628602 | 7.4:-80870462 | MS.gene95450:CDS |
CCAGCCCAAAGCTATGGTGA+AGG | 0.629782 | 7.4:-80869819 | MS.gene95450:CDS |
CATCTTGGAGAAAGCAGAGG+CGG | 0.635809 | 7.4:+80869590 | None:intergenic |
GGGTCATTTGAGTCATCACA+AGG | 0.644746 | 7.4:+80869888 | None:intergenic |
TGAGTTACATATCTATAATG+CGG | 0.657813 | 7.4:-80869520 | MS.gene95450:CDS |
GTGTAGACATAAATGAATTG+TGG | 0.661724 | 7.4:-80869995 | MS.gene95450:CDS |
ACAATTCATTTATGTCTACA+CGG | 0.669650 | 7.4:+80869997 | None:intergenic |
GTTACATATCTATAATGCGG+AGG | 0.671372 | 7.4:-80869517 | MS.gene95450:CDS |
TTAAAACTGGATGCCCAGAG+TGG | 0.678752 | 7.4:-80869696 | MS.gene95450:CDS |
TATGAGAGGATCATCAACAA+AGG | 0.683539 | 7.4:+80870371 | None:intergenic |
GTTGAATGGAGACATATGGA+TGG | 0.713125 | 7.4:-80869778 | MS.gene95450:CDS |
TCATTTGAGTCATCACAAGG+AGG | 0.722989 | 7.4:+80869891 | None:intergenic |
GTAAACATCAAAATTATACG+AGG | 0.728568 | 7.4:+80869722 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTAATGTTGTATTTTATAA+AGG | - | chr7.4:80869998-80870017 | MS.gene95450:CDS | 15.0% |
!! | ACCATAAAAATCATCAATTT+AGG | - | chr7.4:80869561-80869580 | MS.gene95450:CDS | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | + | chr7.4:80870102-80870121 | None:intergenic | 20.0% |
!! | TGATGTTTACAAATTAAAAC+TGG | - | chr7.4:80870258-80870277 | MS.gene95450:CDS | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | + | chr7.4:80870103-80870122 | None:intergenic | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr7.4:80869565-80869584 | None:intergenic | 20.0% |
! | AAAAAGTTTCACTAGTGTTA+TGG | + | chr7.4:80869792-80869811 | None:intergenic | 25.0% |
! | ACAATTCATTTATGTCTACA+CGG | + | chr7.4:80869973-80869992 | None:intergenic | 25.0% |
! | ATTGAACTTAAAGGATACAA+TGG | + | chr7.4:80870053-80870072 | None:intergenic | 25.0% |
! | GTAAACATCAAAATTATACG+AGG | + | chr7.4:80870248-80870267 | None:intergenic | 25.0% |
! | TACGATAATTTATGTATGAG+AGG | + | chr7.4:80869613-80869632 | None:intergenic | 25.0% |
! | TGAGTTACATATCTATAATG+CGG | - | chr7.4:80870447-80870466 | MS.gene95450:CDS | 25.0% |
!! | AATTGAATTCTTTTCCATCT+TGG | + | chr7.4:80870395-80870414 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCGTTGAA+TGG | - | chr7.4:80870175-80870194 | MS.gene95450:CDS | 25.0% |
!! | TGTTGTATTTTATAAAGGTC+TGG | - | chr7.4:80870003-80870022 | MS.gene95450:CDS | 25.0% |
!!! | ATTTTATTTGTCGGAAACTT+TGG | - | chr7.4:80870337-80870356 | MS.gene95450:CDS | 25.0% |
!!! | GAAGACAACATTTTATTTGT+CGG | - | chr7.4:80870328-80870347 | MS.gene95450:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | chr7.4:80869495-80869514 | MS.gene95450:CDS | 30.0% | |
AATGAACAAACTTGAGAGTT+TGG | - | chr7.4:80870306-80870325 | MS.gene95450:CDS | 30.0% | |
AGGAGGATTATTGAACTTAA+AGG | + | chr7.4:80870062-80870081 | None:intergenic | 30.0% | |
GTGTAGACATAAATGAATTG+TGG | - | chr7.4:80869972-80869991 | MS.gene95450:CDS | 30.0% | |
TAGTTTGGTACTTGATAAGT+TGG | - | chr7.4:80869472-80869491 | MS.gene95450:CDS | 30.0% | |
TTATCAAGTACCAAACTAAG+AGG | + | chr7.4:80869470-80869489 | None:intergenic | 30.0% | |
! | GTTGATGAAAGTGATAAAGA+TGG | - | chr7.4:80870421-80870440 | MS.gene95450:CDS | 30.0% |
AAAATGTAGCATCTTCCTGA+AGG | + | chr7.4:80870509-80870528 | None:intergenic | 35.0% | |
AAATGTAGCATCTTCCTGAA+GGG | + | chr7.4:80870508-80870527 | None:intergenic | 35.0% | |
AAGAACATGAGTGTGTGTTT+GGG | - | chr7.4:80869725-80869744 | MS.gene95450:CDS | 35.0% | |
AAGGATGGGATAACTGAATA+GGG | + | chr7.4:80869700-80869719 | None:intergenic | 35.0% | |
AAGTACCAAACTAAGAGGAT+AGG | + | chr7.4:80869465-80869484 | None:intergenic | 35.0% | |
AATCGTTGAATGGAGACATA+TGG | - | chr7.4:80870185-80870204 | MS.gene95450:CDS | 35.0% | |
ACCTCTCGAAAATATCAAGA+AGG | - | chr7.4:80869841-80869860 | MS.gene95450:CDS | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.4:80869500-80869519 | MS.gene95450:CDS | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr7.4:80870531-80870550 | MS.gene95450:CDS | 35.0% | |
GTTACATATCTATAATGCGG+AGG | - | chr7.4:80870450-80870469 | MS.gene95450:CDS | 35.0% | |
TATGAGAGGATCATCAACAA+AGG | + | chr7.4:80869599-80869618 | None:intergenic | 35.0% | |
! | AAAGAGCAAGCCAATCATTT+TGG | - | chr7.4:80869945-80869964 | MS.gene95450:CDS | 35.0% |
! | CAGGAAGATGCTACATTTTT+GGG | - | chr7.4:80870510-80870529 | MS.gene95450:CDS | 35.0% |
! | TCAGGAAGATGCTACATTTT+TGG | - | chr7.4:80870509-80870528 | MS.gene95450:CDS | 35.0% |
!! | ACCTTCTTGATATTTTCGAG+AGG | + | chr7.4:80869845-80869864 | None:intergenic | 35.0% |
!! | ATTTTAATGCAAGCCAACCA+TGG | + | chr7.4:80869757-80869776 | None:intergenic | 35.0% |
!! | TTCTTGATATTTTCGAGAGG+TGG | + | chr7.4:80869842-80869861 | None:intergenic | 35.0% |
!! | TTGTTCAAGTTTTCCACTCT+GGG | + | chr7.4:80870287-80870306 | None:intergenic | 35.0% |
!! | TTTGTTCAAGTTTTCCACTC+TGG | + | chr7.4:80870288-80870307 | None:intergenic | 35.0% |
ACACTCATGTTCTTGATGCA+AGG | + | chr7.4:80869719-80869738 | None:intergenic | 40.0% | |
AGAAGCCTATCCTCTTAGTT+TGG | - | chr7.4:80869457-80869476 | MS.gene95450:CDS | 40.0% | |
AGAGGATCATCAACAAAGGT+GGG | + | chr7.4:80869595-80869614 | None:intergenic | 40.0% | |
CAAGAACATGAGTGTGTGTT+TGG | - | chr7.4:80869724-80869743 | MS.gene95450:CDS | 40.0% | |
CAAGGATGGGATAACTGAAT+AGG | + | chr7.4:80869701-80869720 | None:intergenic | 40.0% | |
CATATCTATAATGCGGAGGA+TGG | - | chr7.4:80870454-80870473 | MS.gene95450:CDS | 40.0% | |
CATGTTCTTGATGCAAGGAT+GGG | + | chr7.4:80869714-80869733 | None:intergenic | 40.0% | |
CTACACGGATCCAAAATGAT+TGG | + | chr7.4:80869958-80869977 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr7.4:80870530-80870549 | MS.gene95450:CDS | 40.0% | |
GTTGAATGGAGACATATGGA+TGG | - | chr7.4:80870189-80870208 | MS.gene95450:CDS | 40.0% | |
GTTGCAGCGATTTACAATTG+TGG | - | chr7.4:80869908-80869927 | MS.gene95450:CDS | 40.0% | |
TACTCACTTGGGCTTGTAAT+CGG | + | chr7.4:80869884-80869903 | None:intergenic | 40.0% | |
TCATGTTCTTGATGCAAGGA+TGG | + | chr7.4:80869715-80869734 | None:intergenic | 40.0% | |
TCATTTGAGTCATCACAAGG+AGG | + | chr7.4:80870079-80870098 | None:intergenic | 40.0% | |
AACGACCTTCACCATAGCTT+TGG | + | chr7.4:80870156-80870175 | None:intergenic | 45.0% | |
ACGACCTTCACCATAGCTTT+GGG | + | chr7.4:80870155-80870174 | None:intergenic | 45.0% | |
ACTCACTTGGGCTTGTAATC+GGG | + | chr7.4:80869883-80869902 | None:intergenic | 45.0% | |
AGATCATGTTAGGTTTGGCG+TGG | - | chr7.4:80869505-80869524 | MS.gene95450:CDS | 45.0% | |
CTGCAACCACATACTCACTT+GGG | + | chr7.4:80869895-80869914 | None:intergenic | 45.0% | |
GAGAGGATCATCAACAAAGG+TGG | + | chr7.4:80869596-80869615 | None:intergenic | 45.0% | |
GGGTCATTTGAGTCATCACA+AGG | + | chr7.4:80870082-80870101 | None:intergenic | 45.0% | |
TACAAGCCCAAGTGAGTATG+TGG | - | chr7.4:80869886-80869905 | MS.gene95450:CDS | 45.0% | |
TCGAGAGGTGGCAAACTAAT+GGG | + | chr7.4:80869830-80869849 | None:intergenic | 45.0% | |
TTAAAACTGGATGCCCAGAG+TGG | - | chr7.4:80870271-80870290 | MS.gene95450:CDS | 45.0% | |
TTCCATCTTGGAGAAAGCAG+AGG | + | chr7.4:80870383-80870402 | None:intergenic | 45.0% | |
TTCGAGAGGTGGCAAACTAA+TGG | + | chr7.4:80869831-80869850 | None:intergenic | 45.0% | |
! | CTGGTATTTGCTGACAACCT+TGG | - | chr7.4:80870022-80870041 | MS.gene95450:CDS | 45.0% |
AGGATACAATGGTGCGTCCA+AGG | + | chr7.4:80870042-80870061 | None:intergenic | 50.0% | |
AGTGTTCCAGCCCAAAGCTA+TGG | - | chr7.4:80870142-80870161 | MS.gene95450:CDS | 50.0% | |
CATCTTGGAGAAAGCAGAGG+CGG | + | chr7.4:80870380-80870399 | None:intergenic | 50.0% | |
GCTGCAACCACATACTCACT+TGG | + | chr7.4:80869896-80869915 | None:intergenic | 50.0% | |
GTAGCATCTTCCTGAAGGGA+CGG | + | chr7.4:80870504-80870523 | None:intergenic | 50.0% | |
TAGCATCTTCCTGAAGGGAC+GGG | + | chr7.4:80870503-80870522 | None:intergenic | 50.0% | |
TGTAATCGGGTCAGCAGACA+AGG | + | chr7.4:80869870-80869889 | None:intergenic | 50.0% | |
TTGGCGTGGTGTGCAAGAAT+TGG | - | chr7.4:80869519-80869538 | MS.gene95450:CDS | 50.0% | |
! | GTGTGTTTGGGCTTTAGCCA+TGG | - | chr7.4:80869737-80869756 | MS.gene95450:CDS | 50.0% |
! | GTTTGGGCTTTAGCCATGGT+TGG | - | chr7.4:80869741-80869760 | MS.gene95450:CDS | 50.0% |
AGCATCTTCCTGAAGGGACG+GGG | + | chr7.4:80870502-80870521 | None:intergenic | 55.0% | |
CCAGCCCAAAGCTATGGTGA+AGG | - | chr7.4:80870148-80870167 | MS.gene95450:CDS | 55.0% | |
CGCCTCTGCTTTCTCCAAGA+TGG | - | chr7.4:80870378-80870397 | MS.gene95450:CDS | 55.0% | |
GATCTTTACCCCGTCCCTTC+AGG | - | chr7.4:80870491-80870510 | MS.gene95450:CDS | 55.0% | |
!! | CCTTCACCATAGCTTTGGGC+TGG | + | chr7.4:80870151-80870170 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 80869431 | 80870558 | 80869431 | ID=MS.gene95450 |
chr7.4 | mRNA | 80869431 | 80870558 | 80869431 | ID=MS.gene95450.t1;Parent=MS.gene95450 |
chr7.4 | exon | 80869431 | 80870558 | 80869431 | ID=MS.gene95450.t1.exon1;Parent=MS.gene95450.t1 |
chr7.4 | CDS | 80869431 | 80870558 | 80869431 | ID=cds.MS.gene95450.t1;Parent=MS.gene95450.t1 |
Gene Sequence |
Protein sequence |