Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42431.t1 | RHN46952.1 | 82.1 | 369 | 65 | 1 | 1 | 368 | 1 | 369 | 8.60E-171 | 609.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42431.t1 | G7L4M6 | 82.1 | 369 | 65 | 1 | 1 | 368 | 1 | 369 | 6.2e-171 | 609.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42431.t1 | MTR_7g077620 | 81.892 | 370 | 66 | 1 | 1 | 369 | 1 | 370 | 0.0 | 612 |
MS.gene42431.t1 | MTR_7g077650 | 67.895 | 380 | 105 | 7 | 1 | 371 | 1 | 372 | 3.34e-170 | 479 |
MS.gene42431.t1 | MTR_7g077660 | 66.230 | 382 | 104 | 7 | 1 | 371 | 1 | 368 | 6.67e-165 | 466 |
MS.gene42431.t1 | MTR_7g076110 | 57.770 | 296 | 113 | 6 | 85 | 371 | 21 | 313 | 3.06e-103 | 307 |
MS.gene42431.t1 | MTR_7g076100 | 61.364 | 264 | 99 | 3 | 110 | 371 | 38 | 300 | 3.43e-100 | 299 |
MS.gene42431.t1 | MTR_7g076100 | 75.926 | 54 | 12 | 1 | 1 | 53 | 1 | 54 | 1.61e-20 | 91.3 |
MS.gene42431.t1 | MTR_1g108740 | 45.526 | 380 | 160 | 15 | 1 | 369 | 1 | 344 | 5.38e-88 | 269 |
MS.gene42431.t1 | MTR_5g038260 | 41.855 | 399 | 183 | 17 | 3 | 371 | 4 | 383 | 6.04e-78 | 245 |
MS.gene42431.t1 | MTR_5g038230 | 39.848 | 394 | 164 | 16 | 5 | 369 | 4 | 353 | 2.25e-72 | 229 |
MS.gene42431.t1 | MTR_1g064570 | 39.952 | 418 | 183 | 17 | 3 | 371 | 2 | 400 | 1.62e-71 | 229 |
MS.gene42431.t1 | MTR_5g082770 | 45.338 | 311 | 134 | 8 | 5 | 305 | 4 | 288 | 4.54e-68 | 216 |
MS.gene42431.t1 | MTR_1g016150 | 48.058 | 206 | 101 | 5 | 1 | 203 | 1 | 203 | 1.06e-50 | 170 |
MS.gene42431.t1 | MTR_7g076130 | 63.710 | 124 | 44 | 1 | 168 | 290 | 25 | 148 | 4.61e-47 | 157 |
MS.gene42431.t1 | MTR_5g082780 | 44.493 | 227 | 94 | 10 | 114 | 327 | 1 | 208 | 1.50e-38 | 138 |
MS.gene42431.t1 | MTR_1g108750 | 44.304 | 158 | 48 | 5 | 5 | 159 | 4 | 124 | 2.06e-22 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 76 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCAGAAGAATGTTATTT+TGG | 0.123370 | 7.2:-28471144 | MS.gene42431:CDS |
TTCTCAAAGTAAGTAAAATT+AGG | 0.221508 | 7.2:+28471189 | None:intergenic |
GTTGCAGCGATTTACGATTT+TGG | 0.237175 | 7.2:-28471381 | MS.gene42431:CDS |
TAGCAATGAGGAAGGTAAAT+TGG | 0.241317 | 7.2:-28471860 | None:intergenic |
TCAAGAGGATGCTACATCTT+TGG | 0.257601 | 7.2:-28470789 | MS.gene42431:CDS |
TTCCCAAAATAACATTCTTC+TGG | 0.264764 | 7.2:+28471141 | None:intergenic |
AATCAACAAACTTGAGAGTT+TGG | 0.291432 | 7.2:-28470986 | MS.gene42431:CDS |
CTTTAAAAGTAAAAGATGTT+TGG | 0.301037 | 7.2:-28471565 | MS.gene42431:CDS |
CAAGAGGATGCTACATCTTT+GGG | 0.301269 | 7.2:-28470788 | MS.gene42431:CDS |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.2:+28471408 | None:intergenic |
TTTAAAAGTAAAAGATGTTT+GGG | 0.344361 | 7.2:-28471564 | MS.gene42431:CDS |
TGTCTACGAGACAATTTGTT+TGG | 0.345267 | 7.2:+28471672 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.2:-28471791 | MS.gene42431:CDS |
GGAGGTATACTGCACTTAAA+AGG | 0.355148 | 7.2:+28471483 | None:intergenic |
AGAAGACTACCCTCTTAGTT+TGG | 0.364954 | 7.2:-28471829 | MS.gene42431:CDS |
TCTCAAAGTAAGTAAAATTA+GGG | 0.380672 | 7.2:+28471190 | None:intergenic |
TTCGAGATGTGGCAGACTAA+TGG | 0.382028 | 7.2:+28471461 | None:intergenic |
AGCATCCTCTTGAAGGAAAC+TGG | 0.389138 | 7.2:+28470799 | None:intergenic |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 7.2:-28470768 | MS.gene42431:CDS |
CACATAGATCATGTTAGGTT+TGG | 0.408770 | 7.2:-28471786 | MS.gene42431:CDS |
AAAGAGCAAGCCAATCATCT+TGG | 0.415307 | 7.2:-28471344 | MS.gene42431:CDS |
AAAAGGATTCACTAGAGTTA+TGG | 0.416187 | 7.2:+28471500 | None:intergenic |
GTCTACGAGACAATTTGTTT+GGG | 0.423564 | 7.2:+28471673 | None:intergenic |
TGGAGGATTGTTGAATTTGA+AGG | 0.425039 | 7.2:+28471230 | None:intergenic |
GAAGGATGGGATAACCGAAT+AGG | 0.427778 | 7.2:+28471591 | None:intergenic |
AAGATGTTTGGGTTGTAGCC+AGG | 0.429738 | 7.2:-28471553 | MS.gene42431:CDS |
AAGATGTAGCATCCTCTTGA+AGG | 0.433762 | 7.2:+28470792 | None:intergenic |
TCGAGATGTGGCAGACTAAT+GGG | 0.454439 | 7.2:+28471462 | None:intergenic |
GTGAGAAAGAGTACCCTATT+CGG | 0.459694 | 7.2:-28471605 | MS.gene42431:CDS |
TTGTTTCTCCAAGTTTGAAA+AGG | 0.460734 | 7.2:-28470911 | MS.gene42431:CDS |
CCAGGGTTGGCTTGCACTAG+TGG | 0.460763 | 7.2:-28471535 | MS.gene42431:CDS |
AGCAATGAGGAAGGTAAATT+GGG | 0.461310 | 7.2:-28471859 | None:intergenic |
TTGGTATGGTGTGCAAGAAT+TGG | 0.468907 | 7.2:-28471767 | MS.gene42431:CDS |
AAGGATGGGATAACCGAATA+GGG | 0.474880 | 7.2:+28471592 | None:intergenic |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.2:+28471407 | None:intergenic |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7.2:-28470767 | MS.gene42431:CDS |
AATCATTGACCGGAGACATA+TGG | 0.484616 | 7.2:-28471104 | MS.gene42431:CDS |
GGGTCATTTGAGTCATTACA+TGG | 0.486658 | 7.2:+28471210 | None:intergenic |
TTGTCAAGCACCAAACTAAG+AGG | 0.492976 | 7.2:+28471819 | None:intergenic |
GTTTGGGTTGTAGCCAGGGT+TGG | 0.496154 | 7.2:-28471548 | MS.gene42431:CDS |
CTTTACCAGTTTCCTTCAAG+AGG | 0.496755 | 7.2:-28470804 | MS.gene42431:CDS |
TAGGGTACTCTTTCTCACTT+AGG | 0.497329 | 7.2:+28471610 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.2:-28471403 | MS.gene42431:CDS |
CAACACGAATCCAAGATGAT+TGG | 0.503058 | 7.2:+28471334 | None:intergenic |
TAGTTTGGTGCTTGACAAGT+TGG | 0.509534 | 7.2:-28471814 | MS.gene42431:CDS |
CAAATCTATAATGCAAAGGA+TGG | 0.513573 | 7.2:-28470844 | MS.gene42431:CDS |
AGATGTTTGGGTTGTAGCCA+GGG | 0.516925 | 7.2:-28471552 | MS.gene42431:CDS |
CTTCAGTGTCGGCAAATACC+AGG | 0.519382 | 7.2:+28471268 | None:intergenic |
AGATCATGTTAGGTTTGGTA+TGG | 0.522351 | 7.2:-28471781 | MS.gene42431:CDS |
TTTCACCATCCATATGTCTC+CGG | 0.527974 | 7.2:+28471095 | None:intergenic |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 7.2:+28470760 | None:intergenic |
GGTCAGCAGACAAGGTAACC+TGG | 0.547547 | 7.2:+28471430 | None:intergenic |
GCTGCAACCACATAATCACT+TGG | 0.549128 | 7.2:+28471396 | None:intergenic |
TACGAGACAATTTGTTTGGG+AGG | 0.550477 | 7.2:+28471676 | None:intergenic |
CTGGTATTTGCCGACACTGA+AGG | 0.560387 | 7.2:-28471267 | MS.gene42431:CDS |
CCACTAGTGCAAGCCAACCC+TGG | 0.563322 | 7.2:+28471535 | None:intergenic |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.2:+28471422 | None:intergenic |
TTTGGGAGGATCATGAGCAT+AGG | 0.587679 | 7.2:+28471690 | None:intergenic |
GGGAGGATCATGAGCATAGG+TGG | 0.597353 | 7.2:+28471693 | None:intergenic |
GTTTGTATGAAAGCTTCAGC+GGG | 0.599734 | 7.2:+28471058 | None:intergenic |
CTCTCACTTAGCAATGAGGA+AGG | 0.604020 | 7.2:-28471868 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.2:+28471409 | None:intergenic |
GTTACAAATCTATAATGCAA+AGG | 0.608901 | 7.2:-28470848 | MS.gene42431:CDS |
AATGATGTCTCCTTCAGTGT+CGG | 0.624058 | 7.2:+28471257 | None:intergenic |
TTCAAACTTGGAGAAACAAG+AGG | 0.627779 | 7.2:+28470915 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.2:+28471397 | None:intergenic |
GATTCACTAGAGTTATGGCA+TGG | 0.641917 | 7.2:+28471505 | None:intergenic |
AGTTTGTATGAAAGCTTCAG+CGG | 0.645095 | 7.2:+28471057 | None:intergenic |
GTAGACATGCAAAATCAAAG+AGG | 0.650836 | 7.2:-28471656 | MS.gene42431:CDS |
TGTCAAGCACCAAACTAAGA+GGG | 0.658247 | 7.2:+28471820 | None:intergenic |
TGGTTGAGATGTTCGAGATG+TGG | 0.667918 | 7.2:+28471450 | None:intergenic |
ACATCTCGAACATCTCAACC+AGG | 0.682124 | 7.2:-28471448 | MS.gene42431:CDS |
TCATTTGAGTCATTACATGG+AGG | 0.686554 | 7.2:+28471213 | None:intergenic |
ATTGACCGGAGACATATGGA+TGG | 0.696827 | 7.2:-28471100 | MS.gene42431:CDS |
AGATGTGGCAGACTAATGGG+AGG | 0.724272 | 7.2:+28471465 | None:intergenic |
TTGGAACTAGACACCCAAAG+CGG | 0.762222 | 7.2:-28471021 | MS.gene42431:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAAAGTAAAAGATGTTT+GGG | - | chr7.2:28471053-28471072 | MS.gene42431:CDS | 15.0% |
!!! | ACTAATGTTGTATTTTATAA+AGG | - | chr7.2:28471326-28471345 | MS.gene42431:CDS | 15.0% |
!! | ACCATAAAAATCATCAATTT+AGG | - | chr7.2:28470892-28470911 | MS.gene42431:CDS | 20.0% |
!! | TCTCAAAGTAAGTAAAATTA+GGG | + | chr7.2:28471430-28471449 | None:intergenic | 20.0% |
!! | TTCTCAAAGTAAGTAAAATT+AGG | + | chr7.2:28471431-28471450 | None:intergenic | 20.0% |
!!! | ACATCTTTTACTTTTAAAGA+TGG | + | chr7.2:28471051-28471070 | None:intergenic | 20.0% |
!!! | CTTTAAAAGTAAAAGATGTT+TGG | - | chr7.2:28471052-28471071 | MS.gene42431:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+CGG | - | chr7.2:28471653-28471672 | MS.gene42431:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr7.2:28470896-28470915 | None:intergenic | 20.0% |
! | GTTACAAATCTATAATGCAA+AGG | - | chr7.2:28471769-28471788 | MS.gene42431:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr7.2:28471717-28471736 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr7.2:28471503-28471522 | MS.gene42431:CDS | 25.0% |
!!! | AACATTTTATTTGTCGGAAT+CGG | - | chr7.2:28471659-28471678 | MS.gene42431:CDS | 25.0% |
!!! | CAAACTCTTTGTTTTCAAAT+TGG | - | chr7.2:28471577-28471596 | MS.gene42431:CDS | 25.0% |
!!! | CTTTTACTTTTAAAGATGGA+AGG | + | chr7.2:28471047-28471066 | None:intergenic | 25.0% |
!!! | TTCCAGAAGAATGTTATTTT+GGG | - | chr7.2:28471474-28471493 | MS.gene42431:CDS | 25.0% |
!!! | TTTCCAGAAGAATGTTATTT+TGG | - | chr7.2:28471473-28471492 | MS.gene42431:CDS | 25.0% |
AAAAGGATTCACTAGAGTTA+TGG | + | chr7.2:28471120-28471139 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | - | chr7.2:28470826-28470845 | MS.gene42431:CDS | 30.0% | |
AATCAACAAACTTGAGAGTT+TGG | - | chr7.2:28471631-28471650 | MS.gene42431:CDS | 30.0% | |
CAAATCTATAATGCAAAGGA+TGG | - | chr7.2:28471773-28471792 | MS.gene42431:CDS | 30.0% | |
TTCCCAAAATAACATTCTTC+TGG | + | chr7.2:28471479-28471498 | None:intergenic | 30.0% | |
! | TGTTGTATTTTATAAAGGCC+TGG | - | chr7.2:28471331-28471350 | MS.gene42431:CDS | 30.0% |
! | TTGTTTCTCCAAGTTTGAAA+AGG | - | chr7.2:28471706-28471725 | MS.gene42431:CDS | 30.0% |
!! | ACTTTTAAAGATGGAAGGAT+GGG | + | chr7.2:28471042-28471061 | None:intergenic | 30.0% |
!! | TACTTTTAAAGATGGAAGGA+TGG | + | chr7.2:28471043-28471062 | None:intergenic | 30.0% |
!! | TTGTTTAACTTTTCCGCTTT+GGG | + | chr7.2:28471612-28471631 | None:intergenic | 30.0% |
!! | TTTGTTTAACTTTTCCGCTT+TGG | + | chr7.2:28471613-28471632 | None:intergenic | 30.0% |
AGTTTGTATGAAAGCTTCAG+CGG | + | chr7.2:28471563-28471582 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.2:28471213-28471232 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.2:28470831-28470850 | MS.gene42431:CDS | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr7.2:28471850-28471869 | MS.gene42431:CDS | 35.0% | |
GTAGACATGCAAAATCAAAG+AGG | - | chr7.2:28470961-28470980 | MS.gene42431:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.2:28471212-28471231 | None:intergenic | 35.0% | |
TCATTTGAGTCATTACATGG+AGG | + | chr7.2:28471407-28471426 | None:intergenic | 35.0% | |
TGGAGGATTGTTGAATTTGA+AGG | + | chr7.2:28471390-28471409 | None:intergenic | 35.0% | |
TTCAAACTTGGAGAAACAAG+AGG | + | chr7.2:28471705-28471724 | None:intergenic | 35.0% | |
! | AGATCATGTTAGGTTTGGTA+TGG | - | chr7.2:28470836-28470855 | MS.gene42431:CDS | 35.0% |
! | GTCTACGAGACAATTTGTTT+GGG | + | chr7.2:28470947-28470966 | None:intergenic | 35.0% |
! | TGTCTACGAGACAATTTGTT+TGG | + | chr7.2:28470948-28470967 | None:intergenic | 35.0% |
AAAGAGCAAGCCAATCATCT+TGG | - | chr7.2:28471273-28471292 | MS.gene42431:CDS | 40.0% | |
AAGATGTAGCATCCTCTTGA+AGG | + | chr7.2:28471828-28471847 | None:intergenic | 40.0% | |
AAGGATGGGATAACCGAATA+GGG | + | chr7.2:28471028-28471047 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.2:28471211-28471230 | None:intergenic | 40.0% | |
AATCATTGACCGGAGACATA+TGG | - | chr7.2:28471513-28471532 | MS.gene42431:CDS | 40.0% | |
AATGATGTCTCCTTCAGTGT+CGG | + | chr7.2:28471363-28471382 | None:intergenic | 40.0% | |
AGAAGACTACCCTCTTAGTT+TGG | - | chr7.2:28470788-28470807 | MS.gene42431:CDS | 40.0% | |
CAACACGAATCCAAGATGAT+TGG | + | chr7.2:28471286-28471305 | None:intergenic | 40.0% | |
CAAGAGGATGCTACATCTTT+GGG | - | chr7.2:28471829-28471848 | MS.gene42431:CDS | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.2:28471223-28471242 | None:intergenic | 40.0% | |
CTTTACCAGTTTCCTTCAAG+AGG | - | chr7.2:28471813-28471832 | MS.gene42431:CDS | 40.0% | |
GATTCACTAGAGTTATGGCA+TGG | + | chr7.2:28471115-28471134 | None:intergenic | 40.0% | |
GGGTCATTTGAGTCATTACA+TGG | + | chr7.2:28471410-28471429 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr7.2:28471849-28471868 | MS.gene42431:CDS | 40.0% | |
GTTTGTATGAAAGCTTCAGC+GGG | + | chr7.2:28471562-28471581 | None:intergenic | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.2:28471214-28471233 | MS.gene42431:CDS | 40.0% | |
TCAAGAGGATGCTACATCTT+TGG | - | chr7.2:28471828-28471847 | MS.gene42431:CDS | 40.0% | |
TGTCAAGCACCAAACTAAGA+GGG | + | chr7.2:28470800-28470819 | None:intergenic | 40.0% | |
TTGGTATGGTGTGCAAGAAT+TGG | - | chr7.2:28470850-28470869 | MS.gene42431:CDS | 40.0% | |
TTGTCAAGCACCAAACTAAG+AGG | + | chr7.2:28470801-28470820 | None:intergenic | 40.0% | |
TTTCACCATCCATATGTCTC+CGG | + | chr7.2:28471525-28471544 | None:intergenic | 40.0% | |
! | GGAGGTATACTGCACTTAAA+AGG | + | chr7.2:28471137-28471156 | None:intergenic | 40.0% |
! | GTTGCAGCGATTTACGATTT+TGG | - | chr7.2:28471236-28471255 | MS.gene42431:CDS | 40.0% |
! | TACGAGACAATTTGTTTGGG+AGG | + | chr7.2:28470944-28470963 | None:intergenic | 40.0% |
! | TAGGGTACTCTTTCTCACTT+AGG | + | chr7.2:28471010-28471029 | None:intergenic | 40.0% |
!! | GTGAGAAAGAGTACCCTATT+CGG | - | chr7.2:28471012-28471031 | MS.gene42431:CDS | 40.0% |
!! | TAGTTTGGTGCTTGACAAGT+TGG | - | chr7.2:28470803-28470822 | MS.gene42431:CDS | 40.0% |
ACATCTCGAACATCTCAACC+AGG | - | chr7.2:28471169-28471188 | MS.gene42431:CDS | 45.0% | |
AGCATCCTCTTGAAGGAAAC+TGG | + | chr7.2:28471821-28471840 | None:intergenic | 45.0% | |
ATTGACCGGAGACATATGGA+TGG | - | chr7.2:28471517-28471536 | MS.gene42431:CDS | 45.0% | |
GAAGGATGGGATAACCGAAT+AGG | + | chr7.2:28471029-28471048 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | chr7.2:28471224-28471243 | None:intergenic | 45.0% | |
TCGAGATGTGGCAGACTAAT+GGG | + | chr7.2:28471158-28471177 | None:intergenic | 45.0% | |
TGGTTGAGATGTTCGAGATG+TGG | + | chr7.2:28471170-28471189 | None:intergenic | 45.0% | |
TTCGAGATGTGGCAGACTAA+TGG | + | chr7.2:28471159-28471178 | None:intergenic | 45.0% | |
TTGGAACTAGACACCCAAAG+CGG | - | chr7.2:28471596-28471615 | MS.gene42431:CDS | 45.0% | |
TTTGGGAGGATCATGAGCAT+AGG | + | chr7.2:28470930-28470949 | None:intergenic | 45.0% | |
!! | AAGATGTTTGGGTTGTAGCC+AGG | - | chr7.2:28471064-28471083 | MS.gene42431:CDS | 45.0% |
!! | AGATGTTTGGGTTGTAGCCA+GGG | - | chr7.2:28471065-28471084 | MS.gene42431:CDS | 45.0% |
AGATGTGGCAGACTAATGGG+AGG | + | chr7.2:28471155-28471174 | None:intergenic | 50.0% | |
CTGGTATTTGCCGACACTGA+AGG | - | chr7.2:28471350-28471369 | MS.gene42431:CDS | 50.0% | |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.2:28471198-28471217 | None:intergenic | 50.0% |
!! | CTTCAGTGTCGGCAAATACC+AGG | + | chr7.2:28471352-28471371 | None:intergenic | 50.0% |
GGGAGGATCATGAGCATAGG+TGG | + | chr7.2:28470927-28470946 | None:intergenic | 55.0% | |
GGTCAGCAGACAAGGTAACC+TGG | + | chr7.2:28471190-28471209 | None:intergenic | 55.0% | |
!! | GTTTGGGTTGTAGCCAGGGT+TGG | - | chr7.2:28471069-28471088 | MS.gene42431:CDS | 55.0% |
CCACTAGTGCAAGCCAACCC+TGG | + | chr7.2:28471085-28471104 | None:intergenic | 60.0% | |
!! | CCAGGGTTGGCTTGCACTAG+TGG | - | chr7.2:28471082-28471101 | MS.gene42431:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 28470762 | 28471877 | 28470762 | ID=MS.gene42431 |
chr7.2 | mRNA | 28470762 | 28471877 | 28470762 | ID=MS.gene42431.t1;Parent=MS.gene42431 |
chr7.2 | exon | 28470762 | 28471877 | 28470762 | ID=MS.gene42431.t1.exon1;Parent=MS.gene42431.t1 |
chr7.2 | CDS | 28470762 | 28471877 | 28470762 | ID=cds.MS.gene42431.t1;Parent=MS.gene42431.t1 |
Gene Sequence |
Protein sequence |