Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27745.t1 | RHN46952.1 | 72.6 | 372 | 94 | 5 | 1 | 367 | 1 | 369 | 1.30E-145 | 526.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27745.t1 | G7L4M6 | 72.6 | 372 | 94 | 5 | 1 | 367 | 1 | 369 | 9.0e-146 | 526.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27745.t1 | MTR_7g077620 | 72.386 | 373 | 95 | 5 | 1 | 368 | 1 | 370 | 0.0 | 527 |
MS.gene27745.t1 | MTR_7g077660 | 69.705 | 373 | 105 | 6 | 1 | 370 | 1 | 368 | 3.96e-174 | 489 |
MS.gene27745.t1 | MTR_7g077650 | 68.325 | 382 | 99 | 7 | 1 | 370 | 1 | 372 | 2.70e-172 | 484 |
MS.gene27745.t1 | MTR_7g076110 | 59.060 | 298 | 108 | 7 | 82 | 370 | 21 | 313 | 1.42e-109 | 323 |
MS.gene27745.t1 | MTR_7g076100 | 65.272 | 239 | 76 | 5 | 135 | 370 | 66 | 300 | 3.73e-95 | 286 |
MS.gene27745.t1 | MTR_7g076100 | 79.630 | 54 | 10 | 1 | 1 | 53 | 1 | 54 | 2.48e-21 | 93.2 |
MS.gene27745.t1 | MTR_5g038260 | 43.358 | 399 | 176 | 14 | 3 | 370 | 4 | 383 | 4.40e-89 | 273 |
MS.gene27745.t1 | MTR_1g108740 | 46.381 | 373 | 166 | 14 | 1 | 368 | 1 | 344 | 5.32e-88 | 269 |
MS.gene27745.t1 | MTR_5g038230 | 41.772 | 395 | 154 | 14 | 5 | 368 | 4 | 353 | 1.07e-80 | 251 |
MS.gene27745.t1 | MTR_5g082770 | 47.097 | 310 | 127 | 9 | 5 | 302 | 4 | 288 | 1.35e-74 | 233 |
MS.gene27745.t1 | MTR_1g064570 | 41.007 | 417 | 179 | 19 | 3 | 370 | 2 | 400 | 2.30e-73 | 233 |
MS.gene27745.t1 | MTR_1g016150 | 52.486 | 181 | 78 | 6 | 1 | 175 | 1 | 179 | 3.72e-51 | 171 |
MS.gene27745.t1 | MTR_7g076130 | 64.286 | 126 | 40 | 3 | 165 | 287 | 25 | 148 | 2.09e-45 | 153 |
MS.gene27745.t1 | MTR_5g082780 | 40.789 | 228 | 104 | 8 | 111 | 326 | 1 | 209 | 7.41e-38 | 136 |
MS.gene27745.t1 | MTR_1g108750 | 49.673 | 153 | 44 | 5 | 5 | 156 | 4 | 124 | 9.15e-27 | 103 |
MS.gene27745.t1 | MTR_3g114970 | 24.734 | 376 | 206 | 16 | 4 | 347 | 3 | 333 | 2.20e-16 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 77 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGGTGATAAGAAGTATTT+AGG | 0.155147 | 7.3:-29219072 | MS.gene27745:CDS |
CAAACTCCATGTTTACAAAT+TGG | 0.204599 | 7.3:-29219247 | MS.gene27745:CDS |
AAAGACCAAGCCAATCATTT+TGG | 0.213606 | 7.3:-29219551 | MS.gene27745:CDS |
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7.3:+29219393 | None:intergenic |
TGAAAGCGAGAAAACTAAAA+AGG | 0.276479 | 7.3:+29219574 | None:intergenic |
AATAAACAAACTTGAGAGTT+TGG | 0.296170 | 7.3:-29219193 | MS.gene27745:CDS |
GGCGGTACACTATACTTAAA+AGG | 0.310810 | 7.3:+29219690 | None:intergenic |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7.3:+29219615 | None:intergenic |
AAAAGGATTCACTAGTGTTA+TGG | 0.340587 | 7.3:+29219707 | None:intergenic |
TGATGATCCTCTCACATAAT+TGG | 0.345632 | 7.3:-29219881 | MS.gene27745:CDS |
GAAGGATGGGATATCTGAAT+AGG | 0.346154 | 7.3:+29219798 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.3:-29219989 | MS.gene27745:CDS |
AGAAGCATATCCTCTTAGTT+TGG | 0.367450 | 7.3:-29220027 | MS.gene27745:CDS |
CATTGAAAGTAAAACGTGTA+TGG | 0.370132 | 7.3:-29219772 | MS.gene27745:CDS |
CTCCAAGTTGGAAAAGGATT+CGG | 0.375437 | 7.3:-29219109 | MS.gene27745:CDS |
TTCGAGAGGTGGCAGACTAA+TGG | 0.384467 | 7.3:+29219668 | None:intergenic |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7.3:+29219394 | None:intergenic |
CACATAGATCATGTTAGGTT+TGG | 0.400301 | 7.3:-29219984 | MS.gene27745:CDS |
CCATGTTTACAAATTGGAAC+TGG | 0.402360 | 7.3:-29219241 | MS.gene27745:CDS |
ATATCCTCTTAGTTTGGTTC+TGG | 0.403102 | 7.3:-29220021 | MS.gene27745:CDS |
AGCCTCTTGTTTCTCCAAGT+TGG | 0.404761 | 7.3:-29219121 | MS.gene27745:CDS |
GGGTTCTACCACAATTTCAA+TGG | 0.408660 | 7.3:-29218969 | MS.gene27745:CDS |
TCATGGTTGGCTTGCATTGG+TGG | 0.434138 | 7.3:-29219742 | MS.gene27745:CDS |
AAGGTGATAAGAAGTATTTA+GGG | 0.434866 | 7.3:-29219071 | MS.gene27745:CDS |
TTGTTTCTCCAAGTTGGAAA+AGG | 0.437802 | 7.3:-29219115 | MS.gene27745:CDS |
TCGAGAGGTGGCAGACTAAT+GGG | 0.438780 | 7.3:+29219669 | None:intergenic |
CTACATGACTCCAAAATGAT+TGG | 0.451480 | 7.3:+29219541 | None:intergenic |
TACTTTCAATGATGGAAGGA+TGG | 0.467120 | 7.3:+29219784 | None:intergenic |
TAGCAATGAGGAAGGTAGAC+TGG | 0.468564 | 7.3:-29220058 | None:intergenic |
ATGTGAAGGATGGAAGCTTT+CGG | 0.471634 | 7.3:-29219035 | MS.gene27745:CDS |
TTGGCGTGGTGTGCAAGAAT+TGG | 0.475029 | 7.3:-29219965 | MS.gene27745:CDS |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7.3:+29219614 | None:intergenic |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7.3:-29218968 | MS.gene27745:CDS |
TAGTTTGGTTCTGGATAAGT+TGG | 0.481337 | 7.3:-29220012 | MS.gene27745:CDS |
TAGTCATGGTTGGCTTGCAT+TGG | 0.486863 | 7.3:-29219745 | MS.gene27745:CDS |
AAGGATGGGATATCTGAATA+GGG | 0.489334 | 7.3:+29219799 | None:intergenic |
AGGAGGATTGTTAAGCTTGA+AGG | 0.497543 | 7.3:+29219434 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7.3:-29219610 | MS.gene27745:CDS |
ACTTTCAATGATGGAAGGAT+GGG | 0.503431 | 7.3:+29219785 | None:intergenic |
TATTTCGTGAAATCATTGAC+TGG | 0.505540 | 7.3:-29219315 | MS.gene27745:CDS |
TTATCCAGAACCAAACTAAG+AGG | 0.508795 | 7.3:+29220017 | None:intergenic |
GAGATCTATAATGTGAAGGA+TGG | 0.509549 | 7.3:-29219045 | MS.gene27745:CDS |
CCAGTTCCAATTTGTAAACA+TGG | 0.513473 | 7.3:+29219241 | None:intergenic |
CGGCTATAATAAGATTGCTC+TGG | 0.516174 | 7.3:+29219345 | None:intergenic |
ATTGAAAGTAAAACGTGTAT+GGG | 0.523237 | 7.3:-29219771 | MS.gene27745:CDS |
AATCATTGACTGGAGACATA+TGG | 0.524535 | 7.3:-29219305 | MS.gene27745:CDS |
GCTGCAACCACATAATCACT+TGG | 0.531804 | 7.3:+29219603 | None:intergenic |
TTGGAACTGGATGTCCAGAA+TGG | 0.546513 | 7.3:-29219228 | MS.gene27745:CDS |
CTCTTTCTTAGCAATGAGGA+AGG | 0.560180 | 7.3:-29220066 | None:intergenic |
TGCATTCGCTCGAAGGAAAG+TGG | 0.562548 | 7.3:+29219000 | None:intergenic |
TTGGTATTTGCCAACAGTGA+CGG | 0.565522 | 7.3:-29219471 | MS.gene27745:CDS |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7.3:+29219629 | None:intergenic |
TGACTCCAAAATGATTGGCT+TGG | 0.571542 | 7.3:+29219546 | None:intergenic |
GGTCAATCCCATTGAAATTG+TGG | 0.574786 | 7.3:+29218961 | None:intergenic |
TTGGTCTAATATATCAAAGA+CGG | 0.581444 | 7.3:-29219862 | MS.gene27745:CDS |
GTATGGGCTGTAGTCATGGT+TGG | 0.586884 | 7.3:-29219755 | MS.gene27745:CDS |
CTGCAACCACATAATCACTT+GGG | 0.596035 | 7.3:+29219604 | None:intergenic |
TTCCAACTTGGAGAAACAAG+AGG | 0.597328 | 7.3:+29219119 | None:intergenic |
GTTAGAGATCTATAATGTGA+AGG | 0.603732 | 7.3:-29219049 | MS.gene27745:CDS |
TTGTTGAGAGATTCGAGAGG+TGG | 0.604059 | 7.3:+29219657 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7.3:+29219616 | None:intergenic |
AACTTGGAGAAACAAGAGGC+TGG | 0.606698 | 7.3:+29219123 | None:intergenic |
AATAGTGTCTCCGTCACTGT+TGG | 0.610668 | 7.3:+29219461 | None:intergenic |
AGCAATGAGGAAGGTAGACT+GGG | 0.614849 | 7.3:-29220057 | None:intergenic |
ACGTGTATGGGCTGTAGTCA+TGG | 0.619342 | 7.3:-29219759 | MS.gene27745:CDS |
TATTAGACCAATTATGTGAG+AGG | 0.620183 | 7.3:+29219874 | None:intergenic |
TGTGAGAGGATCATCAACAT+AGG | 0.620354 | 7.3:+29219888 | None:intergenic |
AGATCATGTTAGGTTTGGCG+TGG | 0.628602 | 7.3:-29219979 | MS.gene27745:CDS |
GGGTCATTTGAGTCATCACA+AGG | 0.644746 | 7.3:+29219414 | None:intergenic |
ACCTCTCGAATCTCTCAACA+AGG | 0.651432 | 7.3:-29219655 | MS.gene27745:CDS |
ATGATTTCACGAAATAAGCA+CGG | 0.674470 | 7.3:+29219322 | None:intergenic |
GAGAGGATCATCAACATAGG+TGG | 0.682169 | 7.3:+29219891 | None:intergenic |
ATTGACTGGAGACATATGGA+TGG | 0.700403 | 7.3:-29219301 | MS.gene27745:CDS |
TCATTTGAGTCATCACAAGG+AGG | 0.722989 | 7.3:+29219417 | None:intergenic |
AGAGGTGGCAGACTAATGGG+CGG | 0.746430 | 7.3:+29219672 | None:intergenic |
ACCTTGTTGAGAGATTCGAG+AGG | 0.768126 | 7.3:+29219654 | None:intergenic |
ATTTCACGAAATAAGCACGG+CGG | 0.813610 | 7.3:+29219325 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCATAAAAATCATCAATTT+AGG | - | chr7.3:29219093-29219112 | MS.gene27745:CDS | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | + | chr7.3:29219625-29219644 | None:intergenic | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | + | chr7.3:29219626-29219645 | None:intergenic | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | chr7.3:29219521-29219540 | MS.gene27745:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | + | chr7.3:29219097-29219116 | None:intergenic | 20.0% |
! | AATAAACAAACTTGAGAGTT+TGG | - | chr7.3:29219823-29219842 | MS.gene27745:CDS | 25.0% |
! | ATTGAAAGTAAAACGTGTAT+GGG | - | chr7.3:29219245-29219264 | MS.gene27745:CDS | 25.0% |
! | TTGGTCTAATATATCAAAGA+CGG | - | chr7.3:29219154-29219173 | MS.gene27745:CDS | 25.0% |
!! | TGTTGTATTTTATAAAGGCT+TGG | - | chr7.3:29219526-29219545 | MS.gene27745:CDS | 25.0% |
!!! | AAGGTGATAAGAAGTATTTA+GGG | - | chr7.3:29219945-29219964 | MS.gene27745:CDS | 25.0% |
!!! | GAAGACAACATTTTATTTGT+CGG | - | chr7.3:29219845-29219864 | MS.gene27745:CDS | 25.0% |
AAAAGGATTCACTAGTGTTA+TGG | + | chr7.3:29219312-29219331 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | - | chr7.3:29219027-29219046 | MS.gene27745:CDS | 30.0% | |
ATGATTTCACGAAATAAGCA+CGG | + | chr7.3:29219697-29219716 | None:intergenic | 30.0% | |
CAAACTCCATGTTTACAAAT+TGG | - | chr7.3:29219769-29219788 | MS.gene27745:CDS | 30.0% | |
CATTGAAAGTAAAACGTGTA+TGG | - | chr7.3:29219244-29219263 | MS.gene27745:CDS | 30.0% | |
GTTAGAGATCTATAATGTGA+AGG | - | chr7.3:29219967-29219986 | MS.gene27745:CDS | 30.0% | |
TATTAGACCAATTATGTGAG+AGG | + | chr7.3:29219145-29219164 | None:intergenic | 30.0% | |
TATTTCGTGAAATCATTGAC+TGG | - | chr7.3:29219701-29219720 | MS.gene27745:CDS | 30.0% | |
TGAAAGCGAGAAAACTAAAA+AGG | + | chr7.3:29219445-29219464 | None:intergenic | 30.0% | |
! | ACACGTTTTACTTTCAATGA+TGG | + | chr7.3:29219243-29219262 | None:intergenic | 30.0% |
!! | ATTTTATTTGTCGGAATCTG+TGG | - | chr7.3:29219854-29219873 | MS.gene27745:CDS | 30.0% |
!! | GAAGGTGATAAGAAGTATTT+AGG | - | chr7.3:29219944-29219963 | MS.gene27745:CDS | 30.0% |
!! | GTTTTACTTTCAATGATGGA+AGG | + | chr7.3:29219239-29219258 | None:intergenic | 30.0% |
!! | TTTGTTCAAGTTTTCCATTC+TGG | + | chr7.3:29219805-29219824 | None:intergenic | 30.0% |
!!! | TCGGTTTATTTTGTTTGTGA+AGG | - | chr7.3:29219926-29219945 | MS.gene27745:CDS | 30.0% |
AAGGATGGGATATCTGAATA+GGG | + | chr7.3:29219220-29219239 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | + | chr7.3:29219405-29219424 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.3:29219032-29219051 | MS.gene27745:CDS | 35.0% | |
CCAGTTCCAATTTGTAAACA+TGG | + | chr7.3:29219778-29219797 | None:intergenic | 35.0% | |
CCATGTTTACAAATTGGAAC+TGG | - | chr7.3:29219775-29219794 | MS.gene27745:CDS | 35.0% | |
CTACATGACTCCAAAATGAT+TGG | + | chr7.3:29219478-29219497 | None:intergenic | 35.0% | |
GAGATCTATAATGTGAAGGA+TGG | - | chr7.3:29219971-29219990 | MS.gene27745:CDS | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr7.3:29220048-29220067 | MS.gene27745:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | + | chr7.3:29219404-29219423 | None:intergenic | 35.0% | |
TGATGATCCTCTCACATAAT+TGG | - | chr7.3:29219135-29219154 | MS.gene27745:CDS | 35.0% | |
TTATCCAGAACCAAACTAAG+AGG | + | chr7.3:29219002-29219021 | None:intergenic | 35.0% | |
! | AAAGACCAAGCCAATCATTT+TGG | - | chr7.3:29219465-29219484 | MS.gene27745:CDS | 35.0% |
! | AATCATTGACTGGAGACATA+TGG | - | chr7.3:29219711-29219730 | MS.gene27745:CDS | 35.0% |
! | ACTTTCAATGATGGAAGGAT+GGG | + | chr7.3:29219234-29219253 | None:intergenic | 35.0% |
! | AGAAGCATATCCTCTTAGTT+TGG | - | chr7.3:29218989-29219008 | MS.gene27745:CDS | 35.0% |
! | ATATCCTCTTAGTTTGGTTC+TGG | - | chr7.3:29218995-29219014 | MS.gene27745:CDS | 35.0% |
! | TACTTTCAATGATGGAAGGA+TGG | + | chr7.3:29219235-29219254 | None:intergenic | 35.0% |
! | TTGTTTCTCCAAGTTGGAAA+AGG | - | chr7.3:29219901-29219920 | MS.gene27745:CDS | 35.0% |
!! | TAGTTTGGTTCTGGATAAGT+TGG | - | chr7.3:29219004-29219023 | MS.gene27745:CDS | 35.0% |
AAAAAGTTGCATTCGCTCGA+AGG | + | chr7.3:29220026-29220045 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | + | chr7.3:29219403-29219422 | None:intergenic | 40.0% | |
AGGAGGATTGTTAAGCTTGA+AGG | + | chr7.3:29219585-29219604 | None:intergenic | 40.0% | |
ATGTGAAGGATGGAAGCTTT+CGG | - | chr7.3:29219981-29220000 | MS.gene27745:CDS | 40.0% | |
ATTGACTGGAGACATATGGA+TGG | - | chr7.3:29219715-29219734 | MS.gene27745:CDS | 40.0% | |
ATTTCACGAAATAAGCACGG+CGG | + | chr7.3:29219694-29219713 | None:intergenic | 40.0% | |
CGGCTATAATAAGATTGCTC+TGG | + | chr7.3:29219674-29219693 | None:intergenic | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.3:29219415-29219434 | None:intergenic | 40.0% | |
GAAGGATGGGATATCTGAAT+AGG | + | chr7.3:29219221-29219240 | None:intergenic | 40.0% | |
GGCGGTACACTATACTTAAA+AGG | + | chr7.3:29219329-29219348 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr7.3:29220047-29220066 | MS.gene27745:CDS | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.3:29219406-29219425 | MS.gene27745:CDS | 40.0% | |
TCATTTGAGTCATCACAAGG+AGG | + | chr7.3:29219602-29219621 | None:intergenic | 40.0% | |
TGTGAGAGGATCATCAACAT+AGG | + | chr7.3:29219131-29219150 | None:intergenic | 40.0% | |
TTCCAACTTGGAGAAACAAG+AGG | + | chr7.3:29219900-29219919 | None:intergenic | 40.0% | |
TTGGTATTTGCCAACAGTGA+CGG | - | chr7.3:29219545-29219564 | MS.gene27745:CDS | 40.0% | |
! | AACCGAATCCTTTTCCAACT+TGG | + | chr7.3:29219912-29219931 | None:intergenic | 40.0% |
! | CTCCAAGTTGGAAAAGGATT+CGG | - | chr7.3:29219907-29219926 | MS.gene27745:CDS | 40.0% |
! | TGACTCCAAAATGATTGGCT+TGG | + | chr7.3:29219473-29219492 | None:intergenic | 40.0% |
!!! | CGAGCGAATGCAACTTTTTT+GGG | - | chr7.3:29220027-29220046 | MS.gene27745:CDS | 40.0% |
!!! | TCGAGCGAATGCAACTTTTT+TGG | - | chr7.3:29220026-29220045 | MS.gene27745:CDS | 40.0% |
AACTTGGAGAAACAAGAGGC+TGG | + | chr7.3:29219896-29219915 | None:intergenic | 45.0% | |
AATAGTGTCTCCGTCACTGT+TGG | + | chr7.3:29219558-29219577 | None:intergenic | 45.0% | |
ACCTCTCGAATCTCTCAACA+AGG | - | chr7.3:29219361-29219380 | MS.gene27745:CDS | 45.0% | |
ACCTTGTTGAGAGATTCGAG+AGG | + | chr7.3:29219365-29219384 | None:intergenic | 45.0% | |
AGATCATGTTAGGTTTGGCG+TGG | - | chr7.3:29219037-29219056 | MS.gene27745:CDS | 45.0% | |
GAGAGGATCATCAACATAGG+TGG | + | chr7.3:29219128-29219147 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | chr7.3:29219416-29219435 | None:intergenic | 45.0% | |
GGGTCATTTGAGTCATCACA+AGG | + | chr7.3:29219605-29219624 | None:intergenic | 45.0% | |
TTGGAACTGGATGTCCAGAA+TGG | - | chr7.3:29219788-29219807 | MS.gene27745:CDS | 45.0% | |
TTGTTGAGAGATTCGAGAGG+TGG | + | chr7.3:29219362-29219381 | None:intergenic | 45.0% | |
! | AGCCTCTTGTTTCTCCAAGT+TGG | - | chr7.3:29219895-29219914 | MS.gene27745:CDS | 45.0% |
!! | TAGTCATGGTTGGCTTGCAT+TGG | - | chr7.3:29219271-29219290 | MS.gene27745:CDS | 45.0% |
TCGAGAGGTGGCAGACTAAT+GGG | + | chr7.3:29219350-29219369 | None:intergenic | 50.0% | |
TGCATTCGCTCGAAGGAAAG+TGG | + | chr7.3:29220019-29220038 | None:intergenic | 50.0% | |
TTCGAGAGGTGGCAGACTAA+TGG | + | chr7.3:29219351-29219370 | None:intergenic | 50.0% | |
TTGGCGTGGTGTGCAAGAAT+TGG | - | chr7.3:29219051-29219070 | MS.gene27745:CDS | 50.0% | |
! | ACGTGTATGGGCTGTAGTCA+TGG | - | chr7.3:29219257-29219276 | MS.gene27745:CDS | 50.0% |
! | GTATGGGCTGTAGTCATGGT+TGG | - | chr7.3:29219261-29219280 | MS.gene27745:CDS | 50.0% |
! | TGTAATGGGGTCAGCAGACA+AGG | + | chr7.3:29219390-29219409 | None:intergenic | 50.0% |
!! | TCATGGTTGGCTTGCATTGG+TGG | - | chr7.3:29219274-29219293 | MS.gene27745:CDS | 50.0% |
AGAGGTGGCAGACTAATGGG+CGG | + | chr7.3:29219347-29219366 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 29218963 | 29220075 | 29218963 | ID=MS.gene27745 |
chr7.3 | mRNA | 29218963 | 29220075 | 29218963 | ID=MS.gene27745.t1;Parent=MS.gene27745 |
chr7.3 | exon | 29218963 | 29220075 | 29218963 | ID=MS.gene27745.t1.exon1;Parent=MS.gene27745.t1 |
chr7.3 | CDS | 29218963 | 29220075 | 29218963 | ID=cds.MS.gene27745.t1;Parent=MS.gene27745.t1 |
Gene Sequence |
Protein sequence |