Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041287.t1 | RHN46952.1 | 69.7 | 380 | 104 | 2 | 1 | 380 | 1 | 369 | 2.10E-143 | 518.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041287.t1 | G7L4M6 | 69.7 | 380 | 104 | 2 | 1 | 380 | 1 | 369 | 1.5e-143 | 518.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041287.t1 | MTR_7g077620 | 69.554 | 381 | 105 | 2 | 1 | 381 | 1 | 370 | 0.0 | 520 |
MS.gene041287.t1 | MTR_7g077660 | 62.176 | 386 | 125 | 8 | 1 | 383 | 1 | 368 | 6.23e-155 | 441 |
MS.gene041287.t1 | MTR_7g077650 | 62.308 | 390 | 122 | 9 | 1 | 383 | 1 | 372 | 2.13e-154 | 440 |
MS.gene041287.t1 | MTR_7g076110 | 52.649 | 302 | 131 | 6 | 85 | 383 | 21 | 313 | 9.13e-97 | 291 |
MS.gene041287.t1 | MTR_7g076100 | 60.593 | 236 | 86 | 3 | 149 | 383 | 71 | 300 | 5.30e-85 | 260 |
MS.gene041287.t1 | MTR_7g076100 | 80.000 | 50 | 10 | 0 | 4 | 53 | 5 | 54 | 1.92e-19 | 88.2 |
MS.gene041287.t1 | MTR_1g108740 | 40.665 | 391 | 175 | 15 | 1 | 381 | 1 | 344 | 7.31e-78 | 244 |
MS.gene041287.t1 | MTR_5g038260 | 39.109 | 404 | 203 | 17 | 1 | 383 | 2 | 383 | 1.71e-73 | 234 |
MS.gene041287.t1 | MTR_5g082770 | 45.687 | 313 | 136 | 8 | 5 | 311 | 4 | 288 | 2.43e-72 | 228 |
MS.gene041287.t1 | MTR_1g064570 | 38.967 | 426 | 188 | 18 | 3 | 383 | 2 | 400 | 8.31e-70 | 224 |
MS.gene041287.t1 | MTR_5g038230 | 38.734 | 395 | 179 | 17 | 5 | 381 | 4 | 353 | 1.45e-68 | 220 |
MS.gene041287.t1 | MTR_1g016150 | 43.602 | 211 | 107 | 6 | 1 | 208 | 1 | 202 | 2.75e-48 | 164 |
MS.gene041287.t1 | MTR_7g076130 | 55.738 | 122 | 53 | 1 | 176 | 296 | 27 | 148 | 3.39e-37 | 132 |
MS.gene041287.t1 | MTR_5g082780 | 38.819 | 237 | 117 | 9 | 115 | 342 | 2 | 219 | 1.29e-35 | 130 |
MS.gene041287.t1 | MTR_1g108750 | 39.506 | 162 | 56 | 5 | 5 | 165 | 4 | 124 | 1.85e-22 | 92.0 |
MS.gene041287.t1 | MTR_3g114970 | 24.789 | 355 | 218 | 13 | 4 | 343 | 3 | 323 | 9.92e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 83 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGAGCAAGCCAGTTATTT+TGG | 0.117905 | 7.3:-67220469 | MS.gene041287:CDS |
TTTCGAGAACCATATTCTTA+TGG | 0.218237 | 7.3:-67220269 | MS.gene041287:CDS |
GTCAATGATTTCACAAAATA+AGG | 0.223035 | 7.3:+67220242 | None:intergenic |
TCAACCAGATATTACATCTT+TGG | 0.230598 | 7.3:-67219896 | MS.gene041287:CDS |
ACCATCAAAACCATCAATTT+AGG | 0.236137 | 7.3:-67220868 | MS.gene041287:CDS |
CAAAGTCGACATTTACAAAT+TGG | 0.240256 | 7.3:-67220165 | MS.gene041287:CDS |
AATATCTGGTTGAAGGAAAT+TGG | 0.282521 | 7.3:+67219906 | None:intergenic |
TTCGAGAACCATATTCTTAT+GGG | 0.297366 | 7.3:-67220268 | MS.gene041287:CDS |
ACCTCTCGATTCTGTCTATA+AGG | 0.300786 | 7.3:-67220591 | MS.gene041287:CDS |
GGAGCTACACTATACTTAAA+AGG | 0.314471 | 7.3:+67220626 | None:intergenic |
TAGTTTGGTTCTTGACAAAT+TGG | 0.317439 | 7.3:-67220957 | MS.gene041287:CDS |
CATCGAAAGTAAAATGTGTT+TGG | 0.318111 | 7.3:-67220708 | MS.gene041287:CDS |
CAACCAGATATTACATCTTT+GGG | 0.327223 | 7.3:-67219895 | MS.gene041287:CDS |
TTCTCATAGTAGGCAAAATT+AGG | 0.338194 | 7.3:+67220314 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7.3:-67220934 | MS.gene041287:CDS |
TAAGGATTCCCATAAGAATA+TGG | 0.351097 | 7.3:+67220260 | None:intergenic |
CAGCAATGACGAAGGTTGAT+TGG | 0.361038 | 7.3:-67221003 | None:intergenic |
TAATCACTTGGGCTTGTAAC+GGG | 0.365353 | 7.3:+67220533 | None:intergenic |
TAAGGTTACCTTTGTCGATA+AGG | 0.369302 | 7.3:-67220573 | MS.gene041287:CDS |
AGAAGGTCTACCTCTTAGTT+TGG | 0.378617 | 7.3:-67220972 | MS.gene041287:CDS |
GTACATGAACCCAAAATAAC+TGG | 0.382067 | 7.3:+67220459 | None:intergenic |
TCGAGAGGTGGCAGAGTAAT+GGG | 0.385113 | 7.3:+67220605 | None:intergenic |
CAAGGGGCAGACACAGATAT+TGG | 0.387303 | 7.3:+67220056 | None:intergenic |
AAGGATGGGATAACTGAATA+AGG | 0.387431 | 7.3:+67220735 | None:intergenic |
ATCGAAAGTAAAATGTGTTT+GGG | 0.391537 | 7.3:-67220707 | MS.gene041287:CDS |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 7.3:-67219875 | MS.gene041287:CDS |
CGACATTTACAAATTGGAAC+TGG | 0.414635 | 7.3:-67220159 | MS.gene041287:CDS |
CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7.3:-67220929 | MS.gene041287:CDS |
GAACCCAAAGATGTAATATC+TGG | 0.421266 | 7.3:+67219892 | None:intergenic |
GTTGATTGGGCAACTTTAGA+AGG | 0.422572 | 7.3:-67220989 | MS.gene041287:CDS |
GCCATGGTTGGCTTGCACTA+GGG | 0.425720 | 7.3:-67220679 | MS.gene041287:CDS |
GTACATTAATCCTAAATTGA+TGG | 0.438583 | 7.3:+67220858 | None:intergenic |
ACAAGCCATCTTCTCATAGT+AGG | 0.448914 | 7.3:+67220304 | None:intergenic |
TACTTTCGATGATGGAAGGA+TGG | 0.472218 | 7.3:+67220720 | None:intergenic |
TTGTGTGTATGCGATAATAT+CGG | 0.477556 | 7.3:+67220810 | None:intergenic |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7.3:-67219874 | MS.gene041287:CDS |
AGCAATGACGAAGGTTGATT+GGG | 0.481605 | 7.3:-67221002 | None:intergenic |
ATCGAGAGGTGGCAGAGTAA+TGG | 0.485102 | 7.3:+67220604 | None:intergenic |
AGCCATGGTTGGCTTGCACT+AGG | 0.490479 | 7.3:-67220680 | MS.gene041287:CDS |
TTGTTTCTCCAAGTTAGAAA+AGG | 0.491686 | 7.3:-67220036 | MS.gene041287:CDS |
AAGATGTAATATCTGGTTGA+AGG | 0.492433 | 7.3:+67219899 | None:intergenic |
AGGAGGATTGTTGAACTTGA+AGG | 0.496507 | 7.3:+67220355 | None:intergenic |
TTGGTGTGGTGTGCAAGAAT+TGG | 0.497007 | 7.3:-67220910 | MS.gene041287:CDS |
ATGCTAATTGCTGAAGGCTA+CGG | 0.515407 | 7.3:-67220392 | MS.gene041287:CDS |
TTGTCAAGAACCAAACTAAG+AGG | 0.517195 | 7.3:+67220962 | None:intergenic |
CCATGGTTGGCTTGCACTAG+GGG | 0.523513 | 7.3:-67220678 | MS.gene041287:CDS |
AATCATTGACTGGAGACATA+TGG | 0.524535 | 7.3:-67220229 | MS.gene041287:CDS |
ACTTTCGATGATGGAAGGAT+GGG | 0.524692 | 7.3:+67220721 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.525529 | 7.3:-67220528 | MS.gene041287:CDS |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 7.3:+67219867 | None:intergenic |
ATAATCACTTGGGCTTGTAA+CGG | 0.539349 | 7.3:+67220532 | None:intergenic |
CAGATCTATAATGCGAAGGA+TGG | 0.546339 | 7.3:-67219951 | MS.gene041287:CDS |
GCTGCAACCACATAATCACT+TGG | 0.549128 | 7.3:+67220521 | None:intergenic |
GTTTGGGCTATAGCCATGGT+TGG | 0.562036 | 7.3:-67220691 | MS.gene041287:CDS |
GGATCGTTTGAGTCATCAGA+AGG | 0.579857 | 7.3:+67220335 | None:intergenic |
TGTAACGGGGTCAGCAGACA+AGG | 0.583913 | 7.3:+67220547 | None:intergenic |
AAAAGCATGCTAATTGCTGA+AGG | 0.588450 | 7.3:-67220398 | MS.gene041287:CDS |
TGGAACTGGACGCTCAGAGT+GGG | 0.590330 | 7.3:-67220145 | MS.gene041287:CDS |
TTTCTAACTTGGAGAAACAA+GGG | 0.603773 | 7.3:+67220039 | None:intergenic |
CCCCTAGTGCAAGCCAACCA+TGG | 0.607857 | 7.3:+67220678 | None:intergenic |
TGGTGTGCAAGAATTGGCAA+TGG | 0.611628 | 7.3:-67220904 | MS.gene041287:CDS |
GTTACAGATCTATAATGCGA+AGG | 0.615721 | 7.3:-67219955 | MS.gene041287:CDS |
GGTGTGCAAGAATTGGCAAT+GGG | 0.623893 | 7.3:-67220903 | MS.gene041287:CDS |
TTCTAACTTGGAGAAACAAG+GGG | 0.628076 | 7.3:+67220040 | None:intergenic |
TCTGAGAGGATCATCAACAT+AGG | 0.636274 | 7.3:+67220833 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7.3:+67220522 | None:intergenic |
CAAGGTAACCTTATCGACAA+AGG | 0.637366 | 7.3:+67220565 | None:intergenic |
AATCACTTGGGCTTGTAACG+GGG | 0.640349 | 7.3:+67220534 | None:intergenic |
GTTGAACTTGAAGGATACAA+TGG | 0.640816 | 7.3:+67220364 | None:intergenic |
TCGTTTGAGTCATCAGAAGG+AGG | 0.641501 | 7.3:+67220338 | None:intergenic |
ATGTGTTTGGGCTATAGCCA+TGG | 0.642964 | 7.3:-67220695 | MS.gene041287:CDS |
GCATACACACAAAATCAAAG+AGG | 0.645979 | 7.3:-67220799 | MS.gene041287:CDS |
TGCGATAATATCGGTCTGAG+AGG | 0.660838 | 7.3:+67220819 | None:intergenic |
AGATCATGTTAGGTTTGGTG+TGG | 0.661894 | 7.3:-67220924 | MS.gene041287:CDS |
GAGAGGATCATCAACATAGG+TGG | 0.668596 | 7.3:+67220836 | None:intergenic |
ACTGGACGCTCAGAGTGGGA+AGG | 0.669283 | 7.3:-67220141 | MS.gene041287:CDS |
GTTGCAGCGATATACAATTG+TGG | 0.681283 | 7.3:-67220506 | MS.gene041287:CDS |
GATGGCGGCAAAGATGATTG+CGG | 0.684187 | 7.3:-67219993 | MS.gene041287:CDS |
TTACTTATCAGCAATGACGA+AGG | 0.689200 | 7.3:-67221011 | None:intergenic |
TTGGAACTGGACGCTCAGAG+TGG | 0.693009 | 7.3:-67220146 | MS.gene041287:CDS |
ATTGACTGGAGACATATGGA+TGG | 0.700403 | 7.3:-67220225 | MS.gene041287:CDS |
TTATAGACAGAATCGAGAGG+TGG | 0.705860 | 7.3:+67220593 | None:intergenic |
ACCTTATAGACAGAATCGAG+AGG | 0.707446 | 7.3:+67220590 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAATTTATTTTATTACTGA+TGG | - | chr7.3:67220856-67220875 | MS.gene041287:CDS | 15.0% |
!!! | ATTTATTTTATTACTGATGG+CGG | - | chr7.3:67220859-67220878 | MS.gene041287:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTCT+CGG | - | chr7.3:67220778-67220797 | MS.gene041287:CDS | 20.0% |
! | ATCGAAAGTAAAATGTGTTT+GGG | - | chr7.3:67220160-67220179 | MS.gene041287:CDS | 25.0% |
! | ATTCAAAAAACTTGAGAGTT+TGG | - | chr7.3:67220756-67220775 | MS.gene041287:CDS | 25.0% |
! | GTACATTAATCCTAAATTGA+TGG | + | chr7.3:67220012-67220031 | None:intergenic | 25.0% |
! | GTCAATGATTTCACAAAATA+AGG | + | chr7.3:67220628-67220647 | None:intergenic | 25.0% |
! | TATGGTTCTCGAAAAAAATA+TGG | + | chr7.3:67220592-67220611 | None:intergenic | 25.0% |
!! | AATTGAATCCTTTTCTAACT+TGG | + | chr7.3:67220842-67220861 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+TGG | - | chr7.3:67220628-67220647 | MS.gene041287:CDS | 25.0% |
!!! | AACATTTTATTTCTCGGAAT+CGG | - | chr7.3:67220784-67220803 | MS.gene041287:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | chr7.3:67219933-67219952 | MS.gene041287:CDS | 30.0% | |
AAGATGTAATATCTGGTTGA+AGG | + | chr7.3:67220971-67220990 | None:intergenic | 30.0% | |
AATATCTGGTTGAAGGAAAT+TGG | + | chr7.3:67220964-67220983 | None:intergenic | 30.0% | |
ACCATCAAAACCATCAATTT+AGG | - | chr7.3:67219999-67220018 | MS.gene041287:CDS | 30.0% | |
CAAAGTCGACATTTACAAAT+TGG | - | chr7.3:67220702-67220721 | MS.gene041287:CDS | 30.0% | |
CAACCAGATATTACATCTTT+GGG | - | chr7.3:67220972-67220991 | MS.gene041287:CDS | 30.0% | |
CATCGAAAGTAAAATGTGTT+TGG | - | chr7.3:67220159-67220178 | MS.gene041287:CDS | 30.0% | |
TAAGGATTCCCATAAGAATA+TGG | + | chr7.3:67220610-67220629 | None:intergenic | 30.0% | |
TCAACCAGATATTACATCTT+TGG | - | chr7.3:67220971-67220990 | MS.gene041287:CDS | 30.0% | |
TTCGAGAACCATATTCTTAT+GGG | - | chr7.3:67220599-67220618 | MS.gene041287:CDS | 30.0% | |
TTCTCATAGTAGGCAAAATT+AGG | + | chr7.3:67220556-67220575 | None:intergenic | 30.0% | |
TTGTGTGTATGCGATAATAT+CGG | + | chr7.3:67220060-67220079 | None:intergenic | 30.0% | |
TTTCGAGAACCATATTCTTA+TGG | - | chr7.3:67220598-67220617 | MS.gene041287:CDS | 30.0% | |
TTTCTAACTTGGAGAAACAA+GGG | + | chr7.3:67220831-67220850 | None:intergenic | 30.0% | |
! | ACACATTTTACTTTCGATGA+TGG | + | chr7.3:67220158-67220177 | None:intergenic | 30.0% |
! | TTGTTTCTCCAAGTTAGAAA+AGG | - | chr7.3:67220831-67220850 | MS.gene041287:CDS | 30.0% |
! | TTTTCTAACTTGGAGAAACA+AGG | + | chr7.3:67220832-67220851 | None:intergenic | 30.0% |
!! | TAGTTTGGTTCTTGACAAAT+TGG | - | chr7.3:67219910-67219929 | MS.gene041287:CDS | 30.0% |
!!! | ATTTTACTTTCGATGATGGA+AGG | + | chr7.3:67220154-67220173 | None:intergenic | 30.0% |
!!! | TCCTAAATTGATGGTTTTGA+TGG | + | chr7.3:67220003-67220022 | None:intergenic | 30.0% |
AAGGATGGGATAACTGAATA+AGG | + | chr7.3:67220135-67220154 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+CGG | + | chr7.3:67220338-67220357 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | chr7.3:67219938-67219957 | MS.gene041287:CDS | 35.0% | |
CGACATTTACAAATTGGAAC+TGG | - | chr7.3:67220708-67220727 | MS.gene041287:CDS | 35.0% | |
GAACCCAAAGATGTAATATC+TGG | + | chr7.3:67220978-67220997 | None:intergenic | 35.0% | |
GCATACACACAAAATCAAAG+AGG | - | chr7.3:67220068-67220087 | MS.gene041287:CDS | 35.0% | |
GGAGCTACACTATACTTAAA+AGG | + | chr7.3:67220244-67220263 | None:intergenic | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr7.3:67220993-67221012 | MS.gene041287:CDS | 35.0% | |
GTACATGAACCCAAAATAAC+TGG | + | chr7.3:67220411-67220430 | None:intergenic | 35.0% | |
GTTACAGATCTATAATGCGA+AGG | - | chr7.3:67220912-67220931 | MS.gene041287:CDS | 35.0% | |
GTTGAACTTGAAGGATACAA+TGG | + | chr7.3:67220506-67220525 | None:intergenic | 35.0% | |
TAAGGTTACCTTTGTCGATA+AGG | - | chr7.3:67220294-67220313 | MS.gene041287:CDS | 35.0% | |
TTCTAACTTGGAGAAACAAG+GGG | + | chr7.3:67220830-67220849 | None:intergenic | 35.0% | |
TTGTCAAGAACCAAACTAAG+AGG | + | chr7.3:67219908-67219927 | None:intergenic | 35.0% | |
! | AAAAGCATGCTAATTGCTGA+AGG | - | chr7.3:67220469-67220488 | MS.gene041287:CDS | 35.0% |
! | AAAGAGCAAGCCAGTTATTT+TGG | - | chr7.3:67220398-67220417 | MS.gene041287:CDS | 35.0% |
! | AATCATTGACTGGAGACATA+TGG | - | chr7.3:67220638-67220657 | MS.gene041287:CDS | 35.0% |
! | TTTTGCCTACTATGAGAAGA+TGG | - | chr7.3:67220558-67220577 | MS.gene041287:CDS | 35.0% |
!! | AAGAGCAAGCCAGTTATTTT+GGG | - | chr7.3:67220399-67220418 | MS.gene041287:CDS | 35.0% |
ACAAGCCATCTTCTCATAGT+AGG | + | chr7.3:67220566-67220585 | None:intergenic | 40.0% | |
ACCTCTCGATTCTGTCTATA+AGG | - | chr7.3:67220276-67220295 | MS.gene041287:CDS | 40.0% | |
ACCTTATAGACAGAATCGAG+AGG | + | chr7.3:67220280-67220299 | None:intergenic | 40.0% | |
AGAAGGTCTACCTCTTAGTT+TGG | - | chr7.3:67219895-67219914 | MS.gene041287:CDS | 40.0% | |
AGGAGGATTGTTGAACTTGA+AGG | + | chr7.3:67220515-67220534 | None:intergenic | 40.0% | |
ATGCTAATTGCTGAAGGCTA+CGG | - | chr7.3:67220475-67220494 | MS.gene041287:CDS | 40.0% | |
ATTGACTGGAGACATATGGA+TGG | - | chr7.3:67220642-67220661 | MS.gene041287:CDS | 40.0% | |
CAAGGTAACCTTATCGACAA+AGG | + | chr7.3:67220305-67220324 | None:intergenic | 40.0% | |
CAGATCTATAATGCGAAGGA+TGG | - | chr7.3:67220916-67220935 | MS.gene041287:CDS | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | chr7.3:67220348-67220367 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr7.3:67220992-67221011 | MS.gene041287:CDS | 40.0% | |
GTTGATTGGGCAACTTTAGA+AGG | - | chr7.3:67219878-67219897 | MS.gene041287:CDS | 40.0% | |
GTTGCAGCGATATACAATTG+TGG | - | chr7.3:67220361-67220380 | MS.gene041287:CDS | 40.0% | |
TAATCACTTGGGCTTGTAAC+GGG | + | chr7.3:67220337-67220356 | None:intergenic | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | chr7.3:67220339-67220358 | MS.gene041287:CDS | 40.0% | |
TCTGAGAGGATCATCAACAT+AGG | + | chr7.3:67220037-67220056 | None:intergenic | 40.0% | |
TTATAGACAGAATCGAGAGG+TGG | + | chr7.3:67220277-67220296 | None:intergenic | 40.0% | |
!! | ACTTTCGATGATGGAAGGAT+GGG | + | chr7.3:67220149-67220168 | None:intergenic | 40.0% |
!! | AGATCATGTTAGGTTTGGTG+TGG | - | chr7.3:67219943-67219962 | MS.gene041287:CDS | 40.0% |
!! | TACTTTCGATGATGGAAGGA+TGG | + | chr7.3:67220150-67220169 | None:intergenic | 40.0% |
AATCACTTGGGCTTGTAACG+GGG | + | chr7.3:67220336-67220355 | None:intergenic | 45.0% | |
ATGTGTTTGGGCTATAGCCA+TGG | - | chr7.3:67220172-67220191 | MS.gene041287:CDS | 45.0% | |
GAGAGGATCATCAACATAGG+TGG | + | chr7.3:67220034-67220053 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | chr7.3:67220349-67220368 | None:intergenic | 45.0% | |
GGATCGTTTGAGTCATCAGA+AGG | + | chr7.3:67220535-67220554 | None:intergenic | 45.0% | |
GGTGTGCAAGAATTGGCAAT+GGG | - | chr7.3:67219964-67219983 | MS.gene041287:CDS | 45.0% | |
TCGTTTGAGTCATCAGAAGG+AGG | + | chr7.3:67220532-67220551 | None:intergenic | 45.0% | |
TGCGATAATATCGGTCTGAG+AGG | + | chr7.3:67220051-67220070 | None:intergenic | 45.0% | |
TGGTGTGCAAGAATTGGCAA+TGG | - | chr7.3:67219963-67219982 | MS.gene041287:CDS | 45.0% | |
TTGGTGTGGTGTGCAAGAAT+TGG | - | chr7.3:67219957-67219976 | MS.gene041287:CDS | 45.0% | |
ATCGAGAGGTGGCAGAGTAA+TGG | + | chr7.3:67220266-67220285 | None:intergenic | 50.0% | |
CAAGGGGCAGACACAGATAT+TGG | + | chr7.3:67220814-67220833 | None:intergenic | 50.0% | |
GTTTGGGCTATAGCCATGGT+TGG | - | chr7.3:67220176-67220195 | MS.gene041287:CDS | 50.0% | |
TCGAGAGGTGGCAGAGTAAT+GGG | + | chr7.3:67220265-67220284 | None:intergenic | 50.0% | |
! | GATGGCGGCAAAGATGATTG+CGG | - | chr7.3:67220874-67220893 | MS.gene041287:CDS | 50.0% |
TGGAACTGGACGCTCAGAGT+GGG | - | chr7.3:67220722-67220741 | MS.gene041287:CDS | 55.0% | |
TTGGAACTGGACGCTCAGAG+TGG | - | chr7.3:67220721-67220740 | MS.gene041287:CDS | 55.0% | |
! | TGTAACGGGGTCAGCAGACA+AGG | + | chr7.3:67220323-67220342 | None:intergenic | 55.0% |
!! | AGCCATGGTTGGCTTGCACT+AGG | - | chr7.3:67220187-67220206 | MS.gene041287:CDS | 55.0% |
!! | CCATGGTTGGCTTGCACTAG+GGG | - | chr7.3:67220189-67220208 | MS.gene041287:CDS | 55.0% |
!! | GCCATGGTTGGCTTGCACTA+GGG | - | chr7.3:67220188-67220207 | MS.gene041287:CDS | 55.0% |
ACTGGACGCTCAGAGTGGGA+AGG | - | chr7.3:67220726-67220745 | MS.gene041287:CDS | 60.0% | |
CCCCTAGTGCAAGCCAACCA+TGG | + | chr7.3:67220192-67220211 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 67219869 | 67221020 | 67219869 | ID=MS.gene041287 |
chr7.3 | mRNA | 67219869 | 67221020 | 67219869 | ID=MS.gene041287.t1;Parent=MS.gene041287 |
chr7.3 | exon | 67219869 | 67221020 | 67219869 | ID=MS.gene041287.t1.exon1;Parent=MS.gene041287.t1 |
chr7.3 | CDS | 67219869 | 67221020 | 67219869 | ID=cds.MS.gene041287.t1;Parent=MS.gene041287.t1 |
Gene Sequence |
Protein sequence |