Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066292.t1 | XP_003613576.1 | 86.9 | 382 | 49 | 1 | 1 | 382 | 3 | 383 | 1.70E-201 | 711.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066292.t1 | G7K9R3 | 86.9 | 382 | 49 | 1 | 1 | 382 | 3 | 383 | 1.2e-201 | 711.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066292.t1 | MTR_5g038260 | 86.911 | 382 | 49 | 1 | 1 | 382 | 3 | 383 | 0.0 | 696 |
MS.gene066292.t1 | MTR_5g038230 | 79.581 | 382 | 51 | 3 | 1 | 382 | 1 | 355 | 0.0 | 617 |
MS.gene066292.t1 | MTR_1g064570 | 48.762 | 404 | 181 | 7 | 1 | 382 | 1 | 400 | 1.09e-126 | 370 |
MS.gene066292.t1 | MTR_1g108740 | 43.229 | 384 | 171 | 10 | 2 | 380 | 3 | 344 | 3.32e-93 | 283 |
MS.gene066292.t1 | MTR_5g082770 | 49.515 | 309 | 134 | 11 | 1 | 306 | 1 | 290 | 2.22e-82 | 253 |
MS.gene066292.t1 | MTR_7g077620 | 42.025 | 395 | 180 | 15 | 4 | 379 | 5 | 369 | 2.68e-77 | 244 |
MS.gene066292.t1 | MTR_7g077660 | 40.955 | 398 | 182 | 15 | 4 | 382 | 5 | 368 | 4.41e-73 | 232 |
MS.gene066292.t1 | MTR_7g077650 | 39.853 | 409 | 175 | 18 | 4 | 382 | 5 | 372 | 9.14e-71 | 226 |
MS.gene066292.t1 | MTR_5g082780 | 43.874 | 253 | 121 | 7 | 103 | 353 | 1 | 234 | 8.96e-57 | 186 |
MS.gene066292.t1 | MTR_1g016150 | 46.842 | 190 | 75 | 8 | 2 | 178 | 3 | 179 | 2.83e-45 | 156 |
MS.gene066292.t1 | MTR_1g016150 | 53.623 | 69 | 25 | 1 | 250 | 318 | 175 | 236 | 1.67e-14 | 72.8 |
MS.gene066292.t1 | MTR_7g076110 | 35.127 | 316 | 172 | 12 | 77 | 382 | 21 | 313 | 3.61e-41 | 147 |
MS.gene066292.t1 | MTR_7g076100 | 40.400 | 250 | 124 | 10 | 140 | 382 | 69 | 300 | 4.86e-38 | 139 |
MS.gene066292.t1 | MTR_1g108750 | 42.767 | 159 | 55 | 3 | 1 | 158 | 1 | 124 | 3.29e-26 | 102 |
MS.gene066292.t1 | MTR_6g023955 | 60.714 | 84 | 32 | 1 | 135 | 218 | 69 | 151 | 3.59e-25 | 102 |
MS.gene066292.t1 | MTR_6g023955 | 55.738 | 61 | 27 | 0 | 321 | 381 | 149 | 209 | 1.62e-16 | 78.2 |
MS.gene066292.t1 | MTR_3g114970 | 24.611 | 386 | 248 | 14 | 1 | 377 | 1 | 352 | 1.32e-17 | 83.6 |
MS.gene066292.t1 | MTR_3g114990 | 27.143 | 350 | 190 | 17 | 71 | 377 | 80 | 407 | 5.97e-17 | 82.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 81 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATTACATTGCTCCTAAAT+TGG | 0.222050 | 5.3:+26436148 | None:intergenic |
TAATCATTTGGACTTGTTAT+AGG | 0.239358 | 5.3:+26435847 | None:intergenic |
TCTAATCAATTCCACTTAAA+AGG | 0.241393 | 5.3:+26435160 | None:intergenic |
CCAAACCAAATGTGATAAAT+TGG | 0.246746 | 5.3:+26436225 | None:intergenic |
ATGCAAGACACTGACCATTT+TGG | 0.251355 | 5.3:-26435751 | MS.gene066292:CDS |
TAAAAGCAGGACAAGAGTTT+TGG | 0.281524 | 5.3:-26435780 | MS.gene066292:CDS |
GATGATAAATTCTTCGTCTA+TGG | 0.285112 | 5.3:+26435987 | None:intergenic |
GGTGGTCGTGTTGATGATTA+AGG | 0.291776 | 5.3:+26436169 | None:intergenic |
CTTCTTTGTAACAAAACATT+TGG | 0.301077 | 5.3:+26435613 | None:intergenic |
ATCAACACGACCACCAATTT+AGG | 0.305762 | 5.3:-26436161 | MS.gene066292:CDS |
TTTGTCAAAAGTTGAGAGTT+TGG | 0.306004 | 5.3:-26435425 | MS.gene066292:CDS |
TTAAGAATTGTCAATTCTAA+TGG | 0.308529 | 5.3:+26436051 | None:intergenic |
TCAATCATTGGCAAACTAAT+AGG | 0.312864 | 5.3:+26435934 | None:intergenic |
ATAGGAGCAACATCCTTAAA+AGG | 0.318392 | 5.3:+26435952 | None:intergenic |
TTGAACCAATTTATCACATT+TGG | 0.324529 | 5.3:-26436230 | MS.gene066292:CDS |
AATGGATACACTCTATTTGC+AGG | 0.334507 | 5.3:+26436069 | None:intergenic |
TGAGAAATATGAAGCTGATA+TGG | 0.338929 | 5.3:+26435363 | None:intergenic |
ACAAGTACTTAAGTTGGAAT+TGG | 0.345955 | 5.3:-26435473 | MS.gene066292:CDS |
AACGTAAAACATGGAAGTTT+TGG | 0.351299 | 5.3:-26435244 | MS.gene066292:CDS |
TTGTCAAAAGTTGAGAGTTT+GGG | 0.367643 | 5.3:-26435424 | MS.gene066292:CDS |
GCATAACCATGGAGCGAGAT+TGG | 0.373158 | 5.3:-26436299 | None:intergenic |
CCAATTTATCACATTTGGTT+TGG | 0.373540 | 5.3:-26436225 | MS.gene066292:CDS |
CCTTTGAAGTGAGGTTTGTA+AGG | 0.380229 | 5.3:+26435211 | None:intergenic |
TTGTTATTCAAGTGACCCTT+CGG | 0.395653 | 5.3:-26435653 | MS.gene066292:CDS |
TACTTATTTAGTGAAATCAT+TGG | 0.416138 | 5.3:-26435566 | MS.gene066292:CDS |
CATTACATTCTACAATGGTT+TGG | 0.419262 | 5.3:-26435719 | MS.gene066292:CDS |
GCTGCAACCACATAATCATT+TGG | 0.420868 | 5.3:+26435835 | None:intergenic |
TAATGTCGATGAAACCAAAA+TGG | 0.420892 | 5.3:+26435737 | None:intergenic |
TTCTTTACAAGTACTTAAGT+TGG | 0.428096 | 5.3:-26435479 | MS.gene066292:CDS |
TTTCTCAAGTTATCTACAAA+AGG | 0.428648 | 5.3:-26435347 | MS.gene066292:CDS |
AAAAGGTGGCACAACCCATA+TGG | 0.429129 | 5.3:+26435177 | None:intergenic |
AAGGTATGGCACCTCCCATA+TGG | 0.431844 | 5.3:-26435192 | MS.gene066292:CDS |
TTCAAGTGACCCTTCGGGTA+TGG | 0.433703 | 5.3:-26435647 | MS.gene066292:CDS |
TGGTGAGAAGGTTTATAAGT+AGG | 0.439223 | 5.3:-26435528 | MS.gene066292:CDS |
TGTTATTCAAGTGACCCTTC+GGG | 0.440936 | 5.3:-26435652 | MS.gene066292:CDS |
GGTGAGAAGGTTTATAAGTA+GGG | 0.448283 | 5.3:-26435527 | MS.gene066292:CDS |
CATAACCATGGAGCGAGATT+GGG | 0.451858 | 5.3:-26436298 | None:intergenic |
TCAAAAGGACCTCTAGGATA+AGG | 0.452966 | 5.3:+26435280 | None:intergenic |
GAATGATAAACATCAATCAT+TGG | 0.457445 | 5.3:+26435922 | None:intergenic |
GGTTGCGAGCCAGCCATGAC+TGG | 0.461953 | 5.3:+26436008 | None:intergenic |
GAGAGTTGTGGATGGTGAGA+AGG | 0.464771 | 5.3:-26435540 | MS.gene066292:CDS |
GTTGTGGCTCCAGTCATGGC+TGG | 0.471336 | 5.3:-26436017 | MS.gene066292:CDS |
GGACCTCTAGGATAAGGAAT+AGG | 0.482897 | 5.3:+26435286 | None:intergenic |
CCTTACAAACCTCACTTCAA+AGG | 0.490167 | 5.3:-26435211 | MS.gene066292:CDS |
TTATATATTCCCATATCAAA+AGG | 0.509410 | 5.3:+26435265 | None:intergenic |
AACAAGTCCAAATGATTATG+TGG | 0.518480 | 5.3:-26435842 | MS.gene066292:CDS |
CTTTGAAGTGAGGTTTGTAA+GGG | 0.521548 | 5.3:+26435212 | None:intergenic |
CAAACCTCACTTCAAAGGTA+TGG | 0.525919 | 5.3:-26435206 | MS.gene066292:CDS |
ACGAAGAATTTATCATCACT+TGG | 0.526627 | 5.3:-26435981 | MS.gene066292:CDS |
AGGTATGGCACCTCCCATAT+GGG | 0.532239 | 5.3:-26435191 | MS.gene066292:CDS |
AAAGGTGGCACAACCCATAT+GGG | 0.532965 | 5.3:+26435178 | None:intergenic |
GATTTCACTAAATAAGTAAG+TGG | 0.538843 | 5.3:+26435571 | None:intergenic |
CTTAACAACAAGAGATGTTG+TGG | 0.538941 | 5.3:-26436033 | MS.gene066292:CDS |
TTACATTGCTCCTAAATTGG+TGG | 0.539694 | 5.3:+26436151 | None:intergenic |
TGTCTAGCTTTCATAAAAGC+AGG | 0.542520 | 5.3:-26435793 | MS.gene066292:CDS |
TATTTAGTGAAATCATTGGA+GGG | 0.549492 | 5.3:-26435562 | MS.gene066292:CDS |
GTTTGCCCAATCTCGCTCCA+TGG | 0.556567 | 5.3:+26436293 | None:intergenic |
TATGAAAGCTAGACAGCCAC+GGG | 0.557625 | 5.3:+26435801 | None:intergenic |
CCCATATCAAAAGGACCTCT+AGG | 0.561580 | 5.3:+26435274 | None:intergenic |
TTATTTAGTGAAATCATTGG+AGG | 0.564804 | 5.3:-26435563 | MS.gene066292:CDS |
TTGGTTCTGTCTGCAAACAT+TGG | 0.564939 | 5.3:-26436206 | MS.gene066292:CDS |
TCTGAAGGGATTATTAGCAT+AGG | 0.567183 | 5.3:+26436126 | None:intergenic |
ATCGACATTACATTCTACAA+TGG | 0.582494 | 5.3:-26435724 | MS.gene066292:CDS |
CGAAGAATTTATCATCACTT+GGG | 0.591169 | 5.3:-26435980 | MS.gene066292:CDS |
TTATGAAAGCTAGACAGCCA+CGG | 0.592955 | 5.3:+26435800 | None:intergenic |
TGGTGTATGCCGTAACTCGT+TGG | 0.604557 | 5.3:-26435699 | MS.gene066292:CDS |
GGTGCCATACCTTTGAAGTG+AGG | 0.604787 | 5.3:+26435202 | None:intergenic |
AGGGTCAGAATGTGCAACAA+AGG | 0.604874 | 5.3:-26435508 | MS.gene066292:CDS |
AATCAATTCCACTTAAAAGG+TGG | 0.605003 | 5.3:+26435163 | None:intergenic |
GCATAAAGTTACTTTGTCAG+TGG | 0.605801 | 5.3:-26435872 | MS.gene066292:CDS |
AATCATTGGAGGGAGAGTTG+TGG | 0.606251 | 5.3:-26435552 | MS.gene066292:CDS |
AGATGTTGTGGCTCCAGTCA+TGG | 0.606449 | 5.3:-26436021 | MS.gene066292:CDS |
GGAATATATAACGTAAAACA+TGG | 0.617818 | 5.3:-26435253 | MS.gene066292:CDS |
ATTCTCTGTTCCATACCCGA+AGG | 0.619525 | 5.3:+26435637 | None:intergenic |
GAACCTATTCCTTATCCTAG+AGG | 0.634791 | 5.3:-26435289 | MS.gene066292:CDS |
TTCTCTGTTCCATACCCGAA+GGG | 0.635821 | 5.3:+26435638 | None:intergenic |
GCAGCAATTTACACTACCCG+TGG | 0.645826 | 5.3:-26435817 | MS.gene066292:CDS |
AATTGGATGACAAAGGTGAG+AGG | 0.664453 | 5.3:-26435456 | MS.gene066292:CDS |
ATTGGAGGGAGAGTTGTGGA+TGG | 0.690403 | 5.3:-26435548 | MS.gene066292:CDS |
GGTGGCACAACCCATATGGG+AGG | 0.690978 | 5.3:+26435181 | None:intergenic |
AAGTTGGAATTGGATGACAA+AGG | 0.697370 | 5.3:-26435463 | MS.gene066292:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACTTATTTAGTGAAATCAT+TGG | - | chr5.3:26435890-26435909 | MS.gene066292:CDS | 20.0% |
!! | TTAAGAATTGTCAATTCTAA+TGG | + | chr5.3:26435408-26435427 | None:intergenic | 20.0% |
!! | TTATATATTCCCATATCAAA+AGG | + | chr5.3:26436194-26436213 | None:intergenic | 20.0% |
! | CTTCTTTGTAACAAAACATT+TGG | + | chr5.3:26435846-26435865 | None:intergenic | 25.0% |
! | GAATGATAAACATCAATCAT+TGG | + | chr5.3:26435537-26435556 | None:intergenic | 25.0% |
! | GATTTCACTAAATAAGTAAG+TGG | + | chr5.3:26435888-26435907 | None:intergenic | 25.0% |
! | GGAATATATAACGTAAAACA+TGG | - | chr5.3:26436203-26436222 | MS.gene066292:CDS | 25.0% |
! | TATTTAGTGAAATCATTGGA+GGG | - | chr5.3:26435894-26435913 | MS.gene066292:CDS | 25.0% |
! | TTATTTAGTGAAATCATTGG+AGG | - | chr5.3:26435893-26435912 | MS.gene066292:CDS | 25.0% |
! | TTCTTTACAAGTACTTAAGT+TGG | - | chr5.3:26435977-26435996 | MS.gene066292:CDS | 25.0% |
! | TTGAACCAATTTATCACATT+TGG | - | chr5.3:26435226-26435245 | MS.gene066292:CDS | 25.0% |
! | TTTCTCAAGTTATCTACAAA+AGG | - | chr5.3:26436109-26436128 | MS.gene066292:CDS | 25.0% |
!!! | AATTTTTTTCCAACGAGTTA+CGG | + | chr5.3:26435769-26435788 | None:intergenic | 25.0% |
!!! | TAATCATTTGGACTTGTTAT+AGG | + | chr5.3:26435612-26435631 | None:intergenic | 25.0% |
AACAAGTCCAAATGATTATG+TGG | - | chr5.3:26435614-26435633 | MS.gene066292:CDS | 30.0% | |
ACGAAGAATTTATCATCACT+TGG | - | chr5.3:26435475-26435494 | MS.gene066292:CDS | 30.0% | |
ATCGACATTACATTCTACAA+TGG | - | chr5.3:26435732-26435751 | MS.gene066292:CDS | 30.0% | |
CATTACATTCTACAATGGTT+TGG | - | chr5.3:26435737-26435756 | MS.gene066292:CDS | 30.0% | |
CCAAACCAAATGTGATAAAT+TGG | + | chr5.3:26435234-26435253 | None:intergenic | 30.0% | |
CCAATTTATCACATTTGGTT+TGG | - | chr5.3:26435231-26435250 | MS.gene066292:CDS | 30.0% | |
CGAAGAATTTATCATCACTT+GGG | - | chr5.3:26435476-26435495 | MS.gene066292:CDS | 30.0% | |
GATGATAAATTCTTCGTCTA+TGG | + | chr5.3:26435472-26435491 | None:intergenic | 30.0% | |
TAATGTCGATGAAACCAAAA+TGG | + | chr5.3:26435722-26435741 | None:intergenic | 30.0% | |
TCAATCATTGGCAAACTAAT+AGG | + | chr5.3:26435525-26435544 | None:intergenic | 30.0% | |
TGAGAAATATGAAGCTGATA+TGG | + | chr5.3:26436096-26436115 | None:intergenic | 30.0% | |
TTGTCAAAAGTTGAGAGTTT+GGG | - | chr5.3:26436032-26436051 | MS.gene066292:CDS | 30.0% | |
TTTGTCAAAAGTTGAGAGTT+TGG | - | chr5.3:26436031-26436050 | MS.gene066292:CDS | 30.0% | |
! | AACGTAAAACATGGAAGTTT+TGG | - | chr5.3:26436212-26436231 | MS.gene066292:CDS | 30.0% |
!! | ACAAGTACTTAAGTTGGAAT+TGG | - | chr5.3:26435983-26436002 | MS.gene066292:CDS | 30.0% |
!!! | AATGTTTTATTTGTGGGTGA+CGG | - | chr5.3:26436059-26436078 | MS.gene066292:CDS | 30.0% |
!!! | GGAGACAATGTTTTATTTGT+GGG | - | chr5.3:26436053-26436072 | MS.gene066292:CDS | 30.0% |
AAGTTGGAATTGGATGACAA+AGG | - | chr5.3:26435993-26436012 | MS.gene066292:CDS | 35.0% | |
AATGGATACACTCTATTTGC+AGG | + | chr5.3:26435390-26435409 | None:intergenic | 35.0% | |
ATAGGAGCAACATCCTTAAA+AGG | + | chr5.3:26435507-26435526 | None:intergenic | 35.0% | |
CTTAACAACAAGAGATGTTG+TGG | - | chr5.3:26435423-26435442 | MS.gene066292:CDS | 35.0% | |
GCATTACATTGCTCCTAAAT+TGG | + | chr5.3:26435311-26435330 | None:intergenic | 35.0% | |
GGTGAGAAGGTTTATAAGTA+GGG | - | chr5.3:26435929-26435948 | MS.gene066292:CDS | 35.0% | |
TCTGAAGGGATTATTAGCAT+AGG | + | chr5.3:26435333-26435352 | None:intergenic | 35.0% | |
TGGTGAGAAGGTTTATAAGT+AGG | - | chr5.3:26435928-26435947 | MS.gene066292:CDS | 35.0% | |
TTACATTGCTCCTAAATTGG+TGG | + | chr5.3:26435308-26435327 | None:intergenic | 35.0% | |
! | GCATAAAGTTACTTTGTCAG+TGG | - | chr5.3:26435584-26435603 | MS.gene066292:CDS | 35.0% |
! | TAAAAGCAGGACAAGAGTTT+TGG | - | chr5.3:26435676-26435695 | MS.gene066292:CDS | 35.0% |
! | TTGTTATTCAAGTGACCCTT+CGG | - | chr5.3:26435803-26435822 | MS.gene066292:CDS | 35.0% |
! | TTTCTGGACTCTTTTCTGAA+GGG | + | chr5.3:26435347-26435366 | None:intergenic | 35.0% |
! | TTTTCTGGACTCTTTTCTGA+AGG | + | chr5.3:26435348-26435367 | None:intergenic | 35.0% |
!! | CTATACAAACATCGCTTTTC+TGG | + | chr5.3:26435363-26435382 | None:intergenic | 35.0% |
!! | CTTTGAAGTGAGGTTTGTAA+GGG | + | chr5.3:26436247-26436266 | None:intergenic | 35.0% |
!! | TGTCTAGCTTTCATAAAAGC+AGG | - | chr5.3:26435663-26435682 | MS.gene066292:CDS | 35.0% |
!!! | GGGAGACAATGTTTTATTTG+TGG | - | chr5.3:26436052-26436071 | MS.gene066292:CDS | 35.0% |
AATTGGATGACAAAGGTGAG+AGG | - | chr5.3:26436000-26436019 | MS.gene066292:CDS | 40.0% | |
ATCAACACGACCACCAATTT+AGG | - | chr5.3:26435295-26435314 | MS.gene066292:CDS | 40.0% | |
CAAACCTCACTTCAAAGGTA+TGG | - | chr5.3:26436250-26436269 | MS.gene066292:CDS | 40.0% | |
CCTTACAAACCTCACTTCAA+AGG | - | chr5.3:26436245-26436264 | MS.gene066292:CDS | 40.0% | |
GAACCTATTCCTTATCCTAG+AGG | - | chr5.3:26436167-26436186 | MS.gene066292:CDS | 40.0% | |
GCTGCAACCACATAATCATT+TGG | + | chr5.3:26435624-26435643 | None:intergenic | 40.0% | |
TGTTATTCAAGTGACCCTTC+GGG | - | chr5.3:26435804-26435823 | MS.gene066292:CDS | 40.0% | |
TTATGAAAGCTAGACAGCCA+CGG | + | chr5.3:26435659-26435678 | None:intergenic | 40.0% | |
! | ATGCAAGACACTGACCATTT+TGG | - | chr5.3:26435705-26435724 | MS.gene066292:CDS | 40.0% |
! | CACTTGGGTGAATCCTTTTA+AGG | - | chr5.3:26435491-26435510 | MS.gene066292:CDS | 40.0% |
! | CCTAGAGGTCCTTTTGATAT+GGG | - | chr5.3:26436182-26436201 | MS.gene066292:CDS | 40.0% |
! | TCCTAGAGGTCCTTTTGATA+TGG | - | chr5.3:26436181-26436200 | MS.gene066292:CDS | 40.0% |
!! | CCTTTGAAGTGAGGTTTGTA+AGG | + | chr5.3:26436248-26436267 | None:intergenic | 40.0% |
!! | TCAAAAGGACCTCTAGGATA+AGG | + | chr5.3:26436179-26436198 | None:intergenic | 40.0% |
!! | TTGGTTCTGTCTGCAAACAT+TGG | - | chr5.3:26435250-26435269 | MS.gene066292:CDS | 40.0% |
AAAAGGTGGCACAACCCATA+TGG | + | chr5.3:26436282-26436301 | None:intergenic | 45.0% | |
AAAGGTGGCACAACCCATAT+GGG | + | chr5.3:26436281-26436300 | None:intergenic | 45.0% | |
AATCATTGGAGGGAGAGTTG+TGG | - | chr5.3:26435904-26435923 | MS.gene066292:CDS | 45.0% | |
AGGGTCAGAATGTGCAACAA+AGG | - | chr5.3:26435948-26435967 | MS.gene066292:CDS | 45.0% | |
ATTCTCTGTTCCATACCCGA+AGG | + | chr5.3:26435822-26435841 | None:intergenic | 45.0% | |
CCCATATCAAAAGGACCTCT+AGG | + | chr5.3:26436185-26436204 | None:intergenic | 45.0% | |
TATGAAAGCTAGACAGCCAC+GGG | + | chr5.3:26435658-26435677 | None:intergenic | 45.0% | |
TTCTCTGTTCCATACCCGAA+GGG | + | chr5.3:26435821-26435840 | None:intergenic | 45.0% | |
!! | GGACCTCTAGGATAAGGAAT+AGG | + | chr5.3:26436173-26436192 | None:intergenic | 45.0% |
!! | GGTGGTCGTGTTGATGATTA+AGG | + | chr5.3:26435290-26435309 | None:intergenic | 45.0% |
AAGGTATGGCACCTCCCATA+TGG | - | chr5.3:26436264-26436283 | MS.gene066292:CDS | 50.0% | |
AGATGTTGTGGCTCCAGTCA+TGG | - | chr5.3:26435435-26435454 | MS.gene066292:CDS | 50.0% | |
AGGTATGGCACCTCCCATAT+GGG | - | chr5.3:26436265-26436284 | MS.gene066292:CDS | 50.0% | |
ATTGGAGGGAGAGTTGTGGA+TGG | - | chr5.3:26435908-26435927 | MS.gene066292:CDS | 50.0% | |
GAGAGTTGTGGATGGTGAGA+AGG | - | chr5.3:26435916-26435935 | MS.gene066292:CDS | 50.0% | |
GCAGCAATTTACACTACCCG+TGG | - | chr5.3:26435639-26435658 | MS.gene066292:CDS | 50.0% | |
TGGTGTATGCCGTAACTCGT+TGG | - | chr5.3:26435757-26435776 | MS.gene066292:CDS | 50.0% | |
TTCAAGTGACCCTTCGGGTA+TGG | - | chr5.3:26435809-26435828 | MS.gene066292:CDS | 50.0% | |
! | GGGTTGTGCCACCTTTTAAG+TGG | - | chr5.3:26436285-26436304 | MS.gene066292:CDS | 50.0% |
!! | GGTGCCATACCTTTGAAGTG+AGG | + | chr5.3:26436257-26436276 | None:intergenic | 50.0% |
GGTGGCACAACCCATATGGG+AGG | + | chr5.3:26436278-26436297 | None:intergenic | 60.0% | |
GTTGTGGCTCCAGTCATGGC+TGG | - | chr5.3:26435439-26435458 | MS.gene066292:CDS | 60.0% | |
GGTTGCGAGCCAGCCATGAC+TGG | + | chr5.3:26435451-26435470 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 26435165 | 26436313 | 26435165 | ID=MS.gene066292 |
chr5.3 | mRNA | 26435165 | 26436313 | 26435165 | ID=MS.gene066292.t1;Parent=MS.gene066292 |
chr5.3 | exon | 26435165 | 26436313 | 26435165 | ID=MS.gene066292.t1.exon1;Parent=MS.gene066292.t1 |
chr5.3 | CDS | 26435165 | 26436313 | 26435165 | ID=cds.MS.gene066292.t1;Parent=MS.gene066292.t1 |
Gene Sequence |
Protein sequence |