Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52913.t1 | RHN46952.1 | 67.8 | 370 | 102 | 4 | 1 | 354 | 1 | 369 | 1.00E-128 | 469.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52913.t1 | G7L4M6 | 67.8 | 370 | 102 | 4 | 1 | 354 | 1 | 369 | 7.4e-129 | 469.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52913.t1 | MTR_7g077620 | 67.655 | 371 | 103 | 4 | 1 | 355 | 1 | 370 | 1.08e-168 | 476 |
| MS.gene52913.t1 | MTR_7g077650 | 64.021 | 378 | 109 | 10 | 1 | 357 | 1 | 372 | 6.53e-151 | 430 |
| MS.gene52913.t1 | MTR_7g077660 | 60.638 | 376 | 121 | 11 | 1 | 357 | 1 | 368 | 4.48e-138 | 397 |
| MS.gene52913.t1 | MTR_7g076110 | 49.492 | 295 | 128 | 6 | 81 | 357 | 22 | 313 | 7.74e-82 | 252 |
| MS.gene52913.t1 | MTR_1g108740 | 44.054 | 370 | 166 | 16 | 1 | 355 | 1 | 344 | 2.87e-81 | 251 |
| MS.gene52913.t1 | MTR_7g076100 | 58.051 | 236 | 87 | 3 | 133 | 357 | 66 | 300 | 1.30e-80 | 248 |
| MS.gene52913.t1 | MTR_7g076100 | 74.000 | 50 | 10 | 2 | 1 | 47 | 1 | 50 | 5.53e-15 | 75.1 |
| MS.gene52913.t1 | MTR_5g038260 | 40.100 | 399 | 176 | 16 | 3 | 357 | 4 | 383 | 2.97e-70 | 224 |
| MS.gene52913.t1 | MTR_1g064570 | 39.474 | 418 | 171 | 17 | 3 | 357 | 2 | 400 | 9.20e-69 | 221 |
| MS.gene52913.t1 | MTR_5g038230 | 39.793 | 387 | 160 | 15 | 5 | 355 | 4 | 353 | 1.67e-66 | 214 |
| MS.gene52913.t1 | MTR_5g082770 | 45.066 | 304 | 130 | 10 | 5 | 290 | 4 | 288 | 2.42e-63 | 204 |
| MS.gene52913.t1 | MTR_1g016150 | 47.980 | 198 | 92 | 7 | 1 | 190 | 1 | 195 | 5.97e-48 | 162 |
| MS.gene52913.t1 | MTR_5g082780 | 40.789 | 228 | 111 | 8 | 109 | 322 | 1 | 218 | 2.22e-34 | 126 |
| MS.gene52913.t1 | MTR_7g076130 | 50.000 | 130 | 50 | 5 | 163 | 278 | 25 | 153 | 3.62e-26 | 102 |
| MS.gene52913.t1 | MTR_1g108750 | 46.358 | 151 | 50 | 6 | 5 | 154 | 4 | 124 | 6.16e-23 | 92.8 |
| MS.gene52913.t1 | MTR_3g114990 | 27.225 | 382 | 200 | 17 | 4 | 334 | 22 | 376 | 1.01e-18 | 87.0 |
| MS.gene52913.t1 | MTR_3g114970 | 23.631 | 347 | 202 | 12 | 4 | 318 | 3 | 318 | 8.74e-15 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 76 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTCTACGTTTACAAAT+TGG | 0.205980 | 6.1:-21956474 | MS.gene52913:CDS |
| AACTTCCATCCTTCGCATTA+TGG | 0.220578 | 6.1:+21956270 | None:intergenic |
| TTTCAACATACTTGAGAGTT+TGG | 0.271304 | 6.1:-21956420 | MS.gene52913:CDS |
| CAACCGGATGTCACATCTTT+GGG | 0.283463 | 6.1:-21956219 | MS.gene52913:CDS |
| TAATTACTCGGGCTTGTAAT+CGG | 0.293843 | 6.1:+21956812 | None:intergenic |
| GTTGAACCCGAAGCTTAAAA+TGG | 0.296182 | 6.1:+21956643 | None:intergenic |
| TCAACCGGATGTCACATCTT+TGG | 0.300744 | 6.1:-21956220 | MS.gene52913:CDS |
| TTTCCAGAACAATATCATTA+TGG | 0.309110 | 6.1:-21956581 | MS.gene52913:CDS |
| GGAGCTACACTATACTTAAA+AGG | 0.314471 | 6.1:+21956887 | None:intergenic |
| GACATCCGGTTGAAGGAAAT+TGG | 0.322776 | 6.1:+21956230 | None:intergenic |
| TGGATTCGTGTAAACAGATA+TGG | 0.324446 | 6.1:-21956728 | MS.gene52913:CDS |
| CAATGAAATGACGGTGTGTT+TGG | 0.335412 | 6.1:-21956969 | MS.gene52913:CDS |
| AAGAACACATAGATCATGTT+AGG | 0.348741 | 6.1:-21957180 | MS.gene52913:CDS |
| GAAGGATGAGATAATTGAAT+AGG | 0.358837 | 6.1:+21956995 | None:intergenic |
| AAAAGGATTCGCTAGTGTTA+TGG | 0.360726 | 6.1:+21956904 | None:intergenic |
| ACACACCGTCATTTCATTGA+TGG | 0.365745 | 6.1:+21956973 | None:intergenic |
| GGCAATGAGGAAGGTAGATT+GGG | 0.372533 | 6.1:-21957248 | None:intergenic |
| AGAAAGTCTACCTCTTAGTT+TGG | 0.381080 | 6.1:-21957218 | MS.gene52913:CDS |
| AGGCAATGAGGAAGGTAGAT+TGG | 0.382674 | 6.1:-21957249 | None:intergenic |
| CTACGTTTACAAATTGGAAC+TGG | 0.389715 | 6.1:-21956468 | MS.gene52913:CDS |
| CTTTACCAATTTCCTTCAAC+CGG | 0.393860 | 6.1:-21956235 | MS.gene52913:CDS |
| CCATGGTTGGCTTGCATTGG+TGG | 0.402911 | 6.1:-21956939 | MS.gene52913:CDS |
| TTGGAGAGGTGGCAGACTAA+TGG | 0.403671 | 6.1:+21956865 | None:intergenic |
| GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 6.1:-21956199 | MS.gene52913:CDS |
| CCTCCATAATGATATTGTTC+TGG | 0.422685 | 6.1:+21956578 | None:intergenic |
| AAAGAGCAAGTCAATCATCT+TGG | 0.426179 | 6.1:-21956748 | MS.gene52913:CDS |
| AATTACTCGGGCTTGTAATC+GGG | 0.426509 | 6.1:+21956813 | None:intergenic |
| TGGAGAGGTGGCAGACTAAT+GGG | 0.429349 | 6.1:+21956866 | None:intergenic |
| AGTACTAGCCATCTCATAAC+AGG | 0.432398 | 6.1:+21956613 | None:intergenic |
| AAGGATGAGATAATTGAATA+GGG | 0.458975 | 6.1:+21956996 | None:intergenic |
| TTGTTTCTCCAAGTTTGAAA+AGG | 0.460734 | 6.1:-21956345 | MS.gene52913:CDS |
| AATGAAATGACGGTGTGTTT+GGG | 0.468609 | 6.1:-21956968 | MS.gene52913:CDS |
| TAGTTTGGTTCTTGAGAAGT+TGG | 0.473111 | 6.1:-21957203 | MS.gene52913:CDS |
| GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 6.1:-21956198 | MS.gene52913:CDS |
| TAGCCATGGTTGGCTTGCAT+TGG | 0.484269 | 6.1:-21956942 | MS.gene52913:CDS |
| ACCTCTCCAATCTGTTTACA+AGG | 0.490029 | 6.1:-21956852 | MS.gene52913:CDS |
| TTCTCAAGAACCAAACTAAG+AGG | 0.491952 | 6.1:+21957208 | None:intergenic |
| CTGATATTTGCTGTTGGCAA+TGG | 0.502091 | 6.1:-21956671 | MS.gene52913:CDS |
| AAGATGTGACATCCGGTTGA+AGG | 0.515408 | 6.1:+21956223 | None:intergenic |
| CAATATCATTATGGAGGGCA+TGG | 0.528364 | 6.1:-21956572 | MS.gene52913:CDS |
| GATCAATCCCATTGAAATTG+TGG | 0.531759 | 6.1:+21956191 | None:intergenic |
| AATCATTGACCGGAGACCTA+TGG | 0.532480 | 6.1:-21956538 | MS.gene52913:CDS |
| CCAGAACAATATCATTATGG+AGG | 0.533728 | 6.1:-21956578 | MS.gene52913:CDS |
| GTGTGTTTGGGCGTTAGCCA+TGG | 0.536708 | 6.1:-21956956 | MS.gene52913:CDS |
| TTTCACCATCCATAGGTCTC+CGG | 0.537035 | 6.1:+21956529 | None:intergenic |
| CAAATCCATAATGCGAAGGA+TGG | 0.537880 | 6.1:-21956275 | MS.gene52913:CDS |
| AAAGGTCTGATATTTGCTGT+TGG | 0.547450 | 6.1:-21956677 | MS.gene52913:CDS |
| GTTTGGGCGTTAGCCATGGT+TGG | 0.554659 | 6.1:-21956952 | MS.gene52913:CDS |
| AGGTAACCTTGTAAACAGAT+TGG | 0.555212 | 6.1:+21956846 | None:intergenic |
| GAACCCAAAGATGTGACATC+CGG | 0.561035 | 6.1:+21956216 | None:intergenic |
| TTCGTGTGGTGTGCAAGACT+TGG | 0.561436 | 6.1:-21957156 | MS.gene52913:CDS |
| CAGAACAATATCATTATGGA+GGG | 0.569165 | 6.1:-21956577 | MS.gene52913:CDS |
| CAATTCTGCCTGTTATGAGA+TGG | 0.570742 | 6.1:-21956621 | MS.gene52913:CDS |
| GTTGCAGCGATTTACAATTG+TGG | 0.573110 | 6.1:-21956785 | MS.gene52913:CDS |
| TTCAAACTTGGAGAAACAAG+AGG | 0.574529 | 6.1:+21956349 | None:intergenic |
| GCTGCAACCACGTAATTACT+CGG | 0.580071 | 6.1:+21956800 | None:intergenic |
| AGAGGATCATCAACATAGGA+TGG | 0.580233 | 6.1:+21957098 | None:intergenic |
| TCCTTCCATCAATGAAATGA+CGG | 0.584673 | 6.1:-21956978 | MS.gene52913:CDS |
| TATGAGAATTATTGTATGAG+AGG | 0.586159 | 6.1:+21957080 | None:intergenic |
| ACCGTCATTTCATTGATGGA+AGG | 0.592100 | 6.1:+21956977 | None:intergenic |
| ATTATGATAGGCAATGAGGA+AGG | 0.609073 | 6.1:-21957257 | None:intergenic |
| TTGTAAACAGATTGGAGAGG+TGG | 0.610040 | 6.1:+21956854 | None:intergenic |
| AACTTGGAGAAACAAGAGGC+TGG | 0.613015 | 6.1:+21956353 | None:intergenic |
| TTGGAACTGGACGCTATGAG+TGG | 0.614160 | 6.1:-21956455 | MS.gene52913:CDS |
| GCAATGAGGAAGGTAGATTG+GGG | 0.614437 | 6.1:-21957247 | MS.gene52913:CDS |
| TATGAGAGGATCATCAACAT+AGG | 0.615056 | 6.1:+21957094 | None:intergenic |
| GTTACAAATCCATAATGCGA+AGG | 0.615721 | 6.1:-21956279 | MS.gene52913:CDS |
| CTGCAACCACGTAATTACTC+GGG | 0.626596 | 6.1:+21956801 | None:intergenic |
| AGTTTGCATAAATGCTTGCG+AGG | 0.629904 | 6.1:+21956491 | None:intergenic |
| AGATCATGTTAGGTTTCGTG+TGG | 0.631367 | 6.1:-21957170 | MS.gene52913:CDS |
| AAATTGGTAAAGATTGACTA+CGG | 0.637052 | 6.1:+21956246 | None:intergenic |
| TGTAATCGGGTCATCAGACA+AGG | 0.645501 | 6.1:+21956826 | None:intergenic |
| CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 6.1:+21956939 | None:intergenic |
| TACAAGCCCGAGTAATTACG+TGG | 0.694443 | 6.1:-21956807 | MS.gene52913:CDS |
| ATTGACCGGAGACCTATGGA+TGG | 0.696827 | 6.1:-21956534 | MS.gene52913:CDS |
| ACCTTGTAAACAGATTGGAG+AGG | 0.742777 | 6.1:+21956851 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTATTTTATTTATGA+TGG | - | chr6.1:21957117-21957136 | MS.gene52913:CDS | 10.0% |
| !!! | AACATTTTATTTGTTGGAAT+CGG | - | chr6.1:21957045-21957064 | MS.gene52913:CDS | 20.0% |
| !!! | ACTGATGTTGTATTTTATAA+AGG | - | chr6.1:21956742-21956761 | MS.gene52913:CDS | 20.0% |
| !!! | GAAAACAACATTTTATTTGT+TGG | - | chr6.1:21957039-21957058 | MS.gene52913:CDS | 20.0% |
| ! | AAATTGGTAAAGATTGACTA+CGG | + | chr6.1:21957194-21957213 | None:intergenic | 25.0% |
| ! | AAGGATGAGATAATTGAATA+GGG | + | chr6.1:21956444-21956463 | None:intergenic | 25.0% |
| ! | TATGAGAATTATTGTATGAG+AGG | + | chr6.1:21956360-21956379 | None:intergenic | 25.0% |
| ! | TTTCCAGAACAATATCATTA+TGG | - | chr6.1:21956856-21956875 | MS.gene52913:CDS | 25.0% |
| !! | AATTGAATCCTTTTCAAACT+TGG | + | chr6.1:21957103-21957122 | None:intergenic | 25.0% |
| !! | TATTTTGTGAAATCATTGAC+CGG | - | chr6.1:21956889-21956908 | MS.gene52913:CDS | 25.0% |
| !!! | TATTTTATTTATGATGGCGA+CGG | - | chr6.1:21957123-21957142 | MS.gene52913:CDS | 25.0% |
| AAGAACACATAGATCATGTT+AGG | - | chr6.1:21956257-21956276 | MS.gene52913:CDS | 30.0% | |
| CAAACTCTACGTTTACAAAT+TGG | - | chr6.1:21956963-21956982 | MS.gene52913:CDS | 30.0% | |
| CAGAACAATATCATTATGGA+GGG | - | chr6.1:21956860-21956879 | MS.gene52913:CDS | 30.0% | |
| GAAGGATGAGATAATTGAAT+AGG | + | chr6.1:21956445-21956464 | None:intergenic | 30.0% | |
| TTTCAACATACTTGAGAGTT+TGG | - | chr6.1:21957017-21957036 | MS.gene52913:CDS | 30.0% | |
| ! | ACATAGGATGGACATTTTTA+TGG | + | chr6.1:21956330-21956349 | None:intergenic | 30.0% |
| ! | TTGTTTCTCCAAGTTTGAAA+AGG | - | chr6.1:21957092-21957111 | MS.gene52913:CDS | 30.0% |
| AAAAGGATTCGCTAGTGTTA+TGG | + | chr6.1:21956536-21956555 | None:intergenic | 35.0% | |
| AAAGAGCAAGTCAATCATCT+TGG | - | chr6.1:21956689-21956708 | MS.gene52913:CDS | 35.0% | |
| AATGAAATGACGGTGTGTTT+GGG | - | chr6.1:21956469-21956488 | MS.gene52913:CDS | 35.0% | |
| AGAAAGTCTACCTCTTAGTT+TGG | - | chr6.1:21956219-21956238 | MS.gene52913:CDS | 35.0% | |
| AGGTAACCTTGTAAACAGAT+TGG | + | chr6.1:21956594-21956613 | None:intergenic | 35.0% | |
| CCAGAACAATATCATTATGG+AGG | - | chr6.1:21956859-21956878 | MS.gene52913:CDS | 35.0% | |
| CCTCCATAATGATATTGTTC+TGG | + | chr6.1:21956862-21956881 | None:intergenic | 35.0% | |
| CTACGTTTACAAATTGGAAC+TGG | - | chr6.1:21956969-21956988 | MS.gene52913:CDS | 35.0% | |
| CTTTACCAATTTCCTTCAAC+CGG | - | chr6.1:21957202-21957221 | MS.gene52913:CDS | 35.0% | |
| GGAGCTACACTATACTTAAA+AGG | + | chr6.1:21956553-21956572 | None:intergenic | 35.0% | |
| GGTTCTACCACAATTTCAAT+GGG | - | chr6.1:21957239-21957258 | MS.gene52913:CDS | 35.0% | |
| GTTACAAATCCATAATGCGA+AGG | - | chr6.1:21957158-21957177 | MS.gene52913:CDS | 35.0% | |
| TAATTACTCGGGCTTGTAAT+CGG | + | chr6.1:21956628-21956647 | None:intergenic | 35.0% | |
| TATGAGAGGATCATCAACAT+AGG | + | chr6.1:21956346-21956365 | None:intergenic | 35.0% | |
| TCCTTCCATCAATGAAATGA+CGG | - | chr6.1:21956459-21956478 | MS.gene52913:CDS | 35.0% | |
| TGGATTCGTGTAAACAGATA+TGG | - | chr6.1:21956709-21956728 | MS.gene52913:CDS | 35.0% | |
| TTCAAACTTGGAGAAACAAG+AGG | + | chr6.1:21957091-21957110 | None:intergenic | 35.0% | |
| TTCTCAAGAACCAAACTAAG+AGG | + | chr6.1:21956232-21956251 | None:intergenic | 35.0% | |
| ! | AACATCTTTTCACCATCCAT+AGG | + | chr6.1:21956918-21956937 | None:intergenic | 35.0% |
| !! | AAAGGTCTGATATTTGCTGT+TGG | - | chr6.1:21956760-21956779 | MS.gene52913:CDS | 35.0% |
| !! | TAGTTTGGTTCTTGAGAAGT+TGG | - | chr6.1:21956234-21956253 | MS.gene52913:CDS | 35.0% |
| AACTTCCATCCTTCGCATTA+TGG | + | chr6.1:21957170-21957189 | None:intergenic | 40.0% | |
| AATTACTCGGGCTTGTAATC+GGG | + | chr6.1:21956627-21956646 | None:intergenic | 40.0% | |
| ACACACCGTCATTTCATTGA+TGG | + | chr6.1:21956467-21956486 | None:intergenic | 40.0% | |
| ACCGTCATTTCATTGATGGA+AGG | + | chr6.1:21956463-21956482 | None:intergenic | 40.0% | |
| ACCTCTCCAATCTGTTTACA+AGG | - | chr6.1:21956585-21956604 | MS.gene52913:CDS | 40.0% | |
| ACCTTGTAAACAGATTGGAG+AGG | + | chr6.1:21956589-21956608 | None:intergenic | 40.0% | |
| AGAGGATCATCAACATAGGA+TGG | + | chr6.1:21956342-21956361 | None:intergenic | 40.0% | |
| AGATCATGTTAGGTTTCGTG+TGG | - | chr6.1:21956267-21956286 | MS.gene52913:CDS | 40.0% | |
| AGTACTAGCCATCTCATAAC+AGG | + | chr6.1:21956827-21956846 | None:intergenic | 40.0% | |
| AGTTTGCATAAATGCTTGCG+AGG | + | chr6.1:21956949-21956968 | None:intergenic | 40.0% | |
| CAAATCCATAATGCGAAGGA+TGG | - | chr6.1:21957162-21957181 | MS.gene52913:CDS | 40.0% | |
| CAATATCATTATGGAGGGCA+TGG | - | chr6.1:21956865-21956884 | MS.gene52913:CDS | 40.0% | |
| CAATGAAATGACGGTGTGTT+TGG | - | chr6.1:21956468-21956487 | MS.gene52913:CDS | 40.0% | |
| CAATTCTGCCTGTTATGAGA+TGG | - | chr6.1:21956816-21956835 | MS.gene52913:CDS | 40.0% | |
| GGGTTCTACCACAATTTCAA+TGG | - | chr6.1:21957238-21957257 | MS.gene52913:CDS | 40.0% | |
| GTTGAACCCGAAGCTTAAAA+TGG | + | chr6.1:21956797-21956816 | None:intergenic | 40.0% | |
| GTTGCAGCGATTTACAATTG+TGG | - | chr6.1:21956652-21956671 | MS.gene52913:CDS | 40.0% | |
| TTGTAAACAGATTGGAGAGG+TGG | + | chr6.1:21956586-21956605 | None:intergenic | 40.0% | |
| ! | GAGACACCATTTTAAGCTTC+GGG | - | chr6.1:21956788-21956807 | MS.gene52913:CDS | 40.0% |
| ! | GGAGACACCATTTTAAGCTT+CGG | - | chr6.1:21956787-21956806 | MS.gene52913:CDS | 40.0% |
| !! | CTGATATTTGCTGTTGGCAA+TGG | - | chr6.1:21956766-21956785 | MS.gene52913:CDS | 40.0% |
| AACTTGGAGAAACAAGAGGC+TGG | + | chr6.1:21957087-21957106 | None:intergenic | 45.0% | |
| AAGATGTGACATCCGGTTGA+AGG | + | chr6.1:21957217-21957236 | None:intergenic | 45.0% | |
| AATCATTGACCGGAGACCTA+TGG | - | chr6.1:21956899-21956918 | MS.gene52913:CDS | 45.0% | |
| CAACCGGATGTCACATCTTT+GGG | - | chr6.1:21957218-21957237 | MS.gene52913:CDS | 45.0% | |
| CTGCAACCACGTAATTACTC+GGG | + | chr6.1:21956639-21956658 | None:intergenic | 45.0% | |
| GAACCCAAAGATGTGACATC+CGG | + | chr6.1:21957224-21957243 | None:intergenic | 45.0% | |
| GACATCCGGTTGAAGGAAAT+TGG | + | chr6.1:21957210-21957229 | None:intergenic | 45.0% | |
| GCTGCAACCACGTAATTACT+CGG | + | chr6.1:21956640-21956659 | None:intergenic | 45.0% | |
| TACAAGCCCGAGTAATTACG+TGG | - | chr6.1:21956630-21956649 | MS.gene52913:CDS | 45.0% | |
| TCAACCGGATGTCACATCTT+TGG | - | chr6.1:21957217-21957236 | MS.gene52913:CDS | 45.0% | |
| TGTAATCGGGTCATCAGACA+AGG | + | chr6.1:21956614-21956633 | None:intergenic | 45.0% | |
| TTTCACCATCCATAGGTCTC+CGG | + | chr6.1:21956911-21956930 | None:intergenic | 45.0% | |
| ATTGACCGGAGACCTATGGA+TGG | - | chr6.1:21956903-21956922 | MS.gene52913:CDS | 50.0% | |
| TGGAGAGGTGGCAGACTAAT+GGG | + | chr6.1:21956574-21956593 | None:intergenic | 50.0% | |
| TTCGTGTGGTGTGCAAGACT+TGG | - | chr6.1:21956281-21956300 | MS.gene52913:CDS | 50.0% | |
| TTGGAACTGGACGCTATGAG+TGG | - | chr6.1:21956982-21957001 | MS.gene52913:CDS | 50.0% | |
| TTGGAGAGGTGGCAGACTAA+TGG | + | chr6.1:21956575-21956594 | None:intergenic | 50.0% | |
| !! | TAGCCATGGTTGGCTTGCAT+TGG | - | chr6.1:21956495-21956514 | MS.gene52913:CDS | 50.0% |
| CCACCAATGCAAGCCAACCA+TGG | + | chr6.1:21956501-21956520 | None:intergenic | 55.0% | |
| GTGTGTTTGGGCGTTAGCCA+TGG | - | chr6.1:21956481-21956500 | MS.gene52913:CDS | 55.0% | |
| GTTTGGGCGTTAGCCATGGT+TGG | - | chr6.1:21956485-21956504 | MS.gene52913:CDS | 55.0% | |
| !! | CCATGGTTGGCTTGCATTGG+TGG | - | chr6.1:21956498-21956517 | MS.gene52913:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 21956193 | 21957266 | 21956193 | ID=MS.gene52913 |
| chr6.1 | mRNA | 21956193 | 21957266 | 21956193 | ID=MS.gene52913.t1;Parent=MS.gene52913 |
| chr6.1 | exon | 21956193 | 21957266 | 21956193 | ID=MS.gene52913.t1.exon1;Parent=MS.gene52913.t1 |
| chr6.1 | CDS | 21956193 | 21957266 | 21956193 | ID=cds.MS.gene52913.t1;Parent=MS.gene52913.t1 |
| Gene Sequence |
| Protein sequence |