Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52913.t1 | RHN46952.1 | 67.8 | 370 | 102 | 4 | 1 | 354 | 1 | 369 | 1.00E-128 | 469.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52913.t1 | G7L4M6 | 67.8 | 370 | 102 | 4 | 1 | 354 | 1 | 369 | 7.4e-129 | 469.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene52913.t1 | MTR_7g077620 | 67.655 | 371 | 103 | 4 | 1 | 355 | 1 | 370 | 1.08e-168 | 476 |
MS.gene52913.t1 | MTR_7g077650 | 64.021 | 378 | 109 | 10 | 1 | 357 | 1 | 372 | 6.53e-151 | 430 |
MS.gene52913.t1 | MTR_7g077660 | 60.638 | 376 | 121 | 11 | 1 | 357 | 1 | 368 | 4.48e-138 | 397 |
MS.gene52913.t1 | MTR_7g076110 | 49.492 | 295 | 128 | 6 | 81 | 357 | 22 | 313 | 7.74e-82 | 252 |
MS.gene52913.t1 | MTR_1g108740 | 44.054 | 370 | 166 | 16 | 1 | 355 | 1 | 344 | 2.87e-81 | 251 |
MS.gene52913.t1 | MTR_7g076100 | 58.051 | 236 | 87 | 3 | 133 | 357 | 66 | 300 | 1.30e-80 | 248 |
MS.gene52913.t1 | MTR_7g076100 | 74.000 | 50 | 10 | 2 | 1 | 47 | 1 | 50 | 5.53e-15 | 75.1 |
MS.gene52913.t1 | MTR_5g038260 | 40.100 | 399 | 176 | 16 | 3 | 357 | 4 | 383 | 2.97e-70 | 224 |
MS.gene52913.t1 | MTR_1g064570 | 39.474 | 418 | 171 | 17 | 3 | 357 | 2 | 400 | 9.20e-69 | 221 |
MS.gene52913.t1 | MTR_5g038230 | 39.793 | 387 | 160 | 15 | 5 | 355 | 4 | 353 | 1.67e-66 | 214 |
MS.gene52913.t1 | MTR_5g082770 | 45.066 | 304 | 130 | 10 | 5 | 290 | 4 | 288 | 2.42e-63 | 204 |
MS.gene52913.t1 | MTR_1g016150 | 47.980 | 198 | 92 | 7 | 1 | 190 | 1 | 195 | 5.97e-48 | 162 |
MS.gene52913.t1 | MTR_5g082780 | 40.789 | 228 | 111 | 8 | 109 | 322 | 1 | 218 | 2.22e-34 | 126 |
MS.gene52913.t1 | MTR_7g076130 | 50.000 | 130 | 50 | 5 | 163 | 278 | 25 | 153 | 3.62e-26 | 102 |
MS.gene52913.t1 | MTR_1g108750 | 46.358 | 151 | 50 | 6 | 5 | 154 | 4 | 124 | 6.16e-23 | 92.8 |
MS.gene52913.t1 | MTR_3g114990 | 27.225 | 382 | 200 | 17 | 4 | 334 | 22 | 376 | 1.01e-18 | 87.0 |
MS.gene52913.t1 | MTR_3g114970 | 23.631 | 347 | 202 | 12 | 4 | 318 | 3 | 318 | 8.74e-15 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 76 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACTCTACGTTTACAAAT+TGG | 0.205980 | 6.1:-21956474 | MS.gene52913:CDS |
AACTTCCATCCTTCGCATTA+TGG | 0.220578 | 6.1:+21956270 | None:intergenic |
TTTCAACATACTTGAGAGTT+TGG | 0.271304 | 6.1:-21956420 | MS.gene52913:CDS |
CAACCGGATGTCACATCTTT+GGG | 0.283463 | 6.1:-21956219 | MS.gene52913:CDS |
TAATTACTCGGGCTTGTAAT+CGG | 0.293843 | 6.1:+21956812 | None:intergenic |
GTTGAACCCGAAGCTTAAAA+TGG | 0.296182 | 6.1:+21956643 | None:intergenic |
TCAACCGGATGTCACATCTT+TGG | 0.300744 | 6.1:-21956220 | MS.gene52913:CDS |
TTTCCAGAACAATATCATTA+TGG | 0.309110 | 6.1:-21956581 | MS.gene52913:CDS |
GGAGCTACACTATACTTAAA+AGG | 0.314471 | 6.1:+21956887 | None:intergenic |
GACATCCGGTTGAAGGAAAT+TGG | 0.322776 | 6.1:+21956230 | None:intergenic |
TGGATTCGTGTAAACAGATA+TGG | 0.324446 | 6.1:-21956728 | MS.gene52913:CDS |
CAATGAAATGACGGTGTGTT+TGG | 0.335412 | 6.1:-21956969 | MS.gene52913:CDS |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 6.1:-21957180 | MS.gene52913:CDS |
GAAGGATGAGATAATTGAAT+AGG | 0.358837 | 6.1:+21956995 | None:intergenic |
AAAAGGATTCGCTAGTGTTA+TGG | 0.360726 | 6.1:+21956904 | None:intergenic |
ACACACCGTCATTTCATTGA+TGG | 0.365745 | 6.1:+21956973 | None:intergenic |
GGCAATGAGGAAGGTAGATT+GGG | 0.372533 | 6.1:-21957248 | None:intergenic |
AGAAAGTCTACCTCTTAGTT+TGG | 0.381080 | 6.1:-21957218 | MS.gene52913:CDS |
AGGCAATGAGGAAGGTAGAT+TGG | 0.382674 | 6.1:-21957249 | None:intergenic |
CTACGTTTACAAATTGGAAC+TGG | 0.389715 | 6.1:-21956468 | MS.gene52913:CDS |
CTTTACCAATTTCCTTCAAC+CGG | 0.393860 | 6.1:-21956235 | MS.gene52913:CDS |
CCATGGTTGGCTTGCATTGG+TGG | 0.402911 | 6.1:-21956939 | MS.gene52913:CDS |
TTGGAGAGGTGGCAGACTAA+TGG | 0.403671 | 6.1:+21956865 | None:intergenic |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 6.1:-21956199 | MS.gene52913:CDS |
CCTCCATAATGATATTGTTC+TGG | 0.422685 | 6.1:+21956578 | None:intergenic |
AAAGAGCAAGTCAATCATCT+TGG | 0.426179 | 6.1:-21956748 | MS.gene52913:CDS |
AATTACTCGGGCTTGTAATC+GGG | 0.426509 | 6.1:+21956813 | None:intergenic |
TGGAGAGGTGGCAGACTAAT+GGG | 0.429349 | 6.1:+21956866 | None:intergenic |
AGTACTAGCCATCTCATAAC+AGG | 0.432398 | 6.1:+21956613 | None:intergenic |
AAGGATGAGATAATTGAATA+GGG | 0.458975 | 6.1:+21956996 | None:intergenic |
TTGTTTCTCCAAGTTTGAAA+AGG | 0.460734 | 6.1:-21956345 | MS.gene52913:CDS |
AATGAAATGACGGTGTGTTT+GGG | 0.468609 | 6.1:-21956968 | MS.gene52913:CDS |
TAGTTTGGTTCTTGAGAAGT+TGG | 0.473111 | 6.1:-21957203 | MS.gene52913:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 6.1:-21956198 | MS.gene52913:CDS |
TAGCCATGGTTGGCTTGCAT+TGG | 0.484269 | 6.1:-21956942 | MS.gene52913:CDS |
ACCTCTCCAATCTGTTTACA+AGG | 0.490029 | 6.1:-21956852 | MS.gene52913:CDS |
TTCTCAAGAACCAAACTAAG+AGG | 0.491952 | 6.1:+21957208 | None:intergenic |
CTGATATTTGCTGTTGGCAA+TGG | 0.502091 | 6.1:-21956671 | MS.gene52913:CDS |
AAGATGTGACATCCGGTTGA+AGG | 0.515408 | 6.1:+21956223 | None:intergenic |
CAATATCATTATGGAGGGCA+TGG | 0.528364 | 6.1:-21956572 | MS.gene52913:CDS |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 6.1:+21956191 | None:intergenic |
AATCATTGACCGGAGACCTA+TGG | 0.532480 | 6.1:-21956538 | MS.gene52913:CDS |
CCAGAACAATATCATTATGG+AGG | 0.533728 | 6.1:-21956578 | MS.gene52913:CDS |
GTGTGTTTGGGCGTTAGCCA+TGG | 0.536708 | 6.1:-21956956 | MS.gene52913:CDS |
TTTCACCATCCATAGGTCTC+CGG | 0.537035 | 6.1:+21956529 | None:intergenic |
CAAATCCATAATGCGAAGGA+TGG | 0.537880 | 6.1:-21956275 | MS.gene52913:CDS |
AAAGGTCTGATATTTGCTGT+TGG | 0.547450 | 6.1:-21956677 | MS.gene52913:CDS |
GTTTGGGCGTTAGCCATGGT+TGG | 0.554659 | 6.1:-21956952 | MS.gene52913:CDS |
AGGTAACCTTGTAAACAGAT+TGG | 0.555212 | 6.1:+21956846 | None:intergenic |
GAACCCAAAGATGTGACATC+CGG | 0.561035 | 6.1:+21956216 | None:intergenic |
TTCGTGTGGTGTGCAAGACT+TGG | 0.561436 | 6.1:-21957156 | MS.gene52913:CDS |
CAGAACAATATCATTATGGA+GGG | 0.569165 | 6.1:-21956577 | MS.gene52913:CDS |
CAATTCTGCCTGTTATGAGA+TGG | 0.570742 | 6.1:-21956621 | MS.gene52913:CDS |
GTTGCAGCGATTTACAATTG+TGG | 0.573110 | 6.1:-21956785 | MS.gene52913:CDS |
TTCAAACTTGGAGAAACAAG+AGG | 0.574529 | 6.1:+21956349 | None:intergenic |
GCTGCAACCACGTAATTACT+CGG | 0.580071 | 6.1:+21956800 | None:intergenic |
AGAGGATCATCAACATAGGA+TGG | 0.580233 | 6.1:+21957098 | None:intergenic |
TCCTTCCATCAATGAAATGA+CGG | 0.584673 | 6.1:-21956978 | MS.gene52913:CDS |
TATGAGAATTATTGTATGAG+AGG | 0.586159 | 6.1:+21957080 | None:intergenic |
ACCGTCATTTCATTGATGGA+AGG | 0.592100 | 6.1:+21956977 | None:intergenic |
ATTATGATAGGCAATGAGGA+AGG | 0.609073 | 6.1:-21957257 | None:intergenic |
TTGTAAACAGATTGGAGAGG+TGG | 0.610040 | 6.1:+21956854 | None:intergenic |
AACTTGGAGAAACAAGAGGC+TGG | 0.613015 | 6.1:+21956353 | None:intergenic |
TTGGAACTGGACGCTATGAG+TGG | 0.614160 | 6.1:-21956455 | MS.gene52913:CDS |
GCAATGAGGAAGGTAGATTG+GGG | 0.614437 | 6.1:-21957247 | MS.gene52913:CDS |
TATGAGAGGATCATCAACAT+AGG | 0.615056 | 6.1:+21957094 | None:intergenic |
GTTACAAATCCATAATGCGA+AGG | 0.615721 | 6.1:-21956279 | MS.gene52913:CDS |
CTGCAACCACGTAATTACTC+GGG | 0.626596 | 6.1:+21956801 | None:intergenic |
AGTTTGCATAAATGCTTGCG+AGG | 0.629904 | 6.1:+21956491 | None:intergenic |
AGATCATGTTAGGTTTCGTG+TGG | 0.631367 | 6.1:-21957170 | MS.gene52913:CDS |
AAATTGGTAAAGATTGACTA+CGG | 0.637052 | 6.1:+21956246 | None:intergenic |
TGTAATCGGGTCATCAGACA+AGG | 0.645501 | 6.1:+21956826 | None:intergenic |
CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 6.1:+21956939 | None:intergenic |
TACAAGCCCGAGTAATTACG+TGG | 0.694443 | 6.1:-21956807 | MS.gene52913:CDS |
ATTGACCGGAGACCTATGGA+TGG | 0.696827 | 6.1:-21956534 | MS.gene52913:CDS |
ACCTTGTAAACAGATTGGAG+AGG | 0.742777 | 6.1:+21956851 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAATTTATTTTATTTATGA+TGG | - | chr6.1:21957117-21957136 | MS.gene52913:CDS | 10.0% |
!!! | AACATTTTATTTGTTGGAAT+CGG | - | chr6.1:21957045-21957064 | MS.gene52913:CDS | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | chr6.1:21956742-21956761 | MS.gene52913:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+TGG | - | chr6.1:21957039-21957058 | MS.gene52913:CDS | 20.0% |
! | AAATTGGTAAAGATTGACTA+CGG | + | chr6.1:21957194-21957213 | None:intergenic | 25.0% |
! | AAGGATGAGATAATTGAATA+GGG | + | chr6.1:21956444-21956463 | None:intergenic | 25.0% |
! | TATGAGAATTATTGTATGAG+AGG | + | chr6.1:21956360-21956379 | None:intergenic | 25.0% |
! | TTTCCAGAACAATATCATTA+TGG | - | chr6.1:21956856-21956875 | MS.gene52913:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | chr6.1:21957103-21957122 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+CGG | - | chr6.1:21956889-21956908 | MS.gene52913:CDS | 25.0% |
!!! | TATTTTATTTATGATGGCGA+CGG | - | chr6.1:21957123-21957142 | MS.gene52913:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | chr6.1:21956257-21956276 | MS.gene52913:CDS | 30.0% | |
CAAACTCTACGTTTACAAAT+TGG | - | chr6.1:21956963-21956982 | MS.gene52913:CDS | 30.0% | |
CAGAACAATATCATTATGGA+GGG | - | chr6.1:21956860-21956879 | MS.gene52913:CDS | 30.0% | |
GAAGGATGAGATAATTGAAT+AGG | + | chr6.1:21956445-21956464 | None:intergenic | 30.0% | |
TTTCAACATACTTGAGAGTT+TGG | - | chr6.1:21957017-21957036 | MS.gene52913:CDS | 30.0% | |
! | ACATAGGATGGACATTTTTA+TGG | + | chr6.1:21956330-21956349 | None:intergenic | 30.0% |
! | TTGTTTCTCCAAGTTTGAAA+AGG | - | chr6.1:21957092-21957111 | MS.gene52913:CDS | 30.0% |
AAAAGGATTCGCTAGTGTTA+TGG | + | chr6.1:21956536-21956555 | None:intergenic | 35.0% | |
AAAGAGCAAGTCAATCATCT+TGG | - | chr6.1:21956689-21956708 | MS.gene52913:CDS | 35.0% | |
AATGAAATGACGGTGTGTTT+GGG | - | chr6.1:21956469-21956488 | MS.gene52913:CDS | 35.0% | |
AGAAAGTCTACCTCTTAGTT+TGG | - | chr6.1:21956219-21956238 | MS.gene52913:CDS | 35.0% | |
AGGTAACCTTGTAAACAGAT+TGG | + | chr6.1:21956594-21956613 | None:intergenic | 35.0% | |
CCAGAACAATATCATTATGG+AGG | - | chr6.1:21956859-21956878 | MS.gene52913:CDS | 35.0% | |
CCTCCATAATGATATTGTTC+TGG | + | chr6.1:21956862-21956881 | None:intergenic | 35.0% | |
CTACGTTTACAAATTGGAAC+TGG | - | chr6.1:21956969-21956988 | MS.gene52913:CDS | 35.0% | |
CTTTACCAATTTCCTTCAAC+CGG | - | chr6.1:21957202-21957221 | MS.gene52913:CDS | 35.0% | |
GGAGCTACACTATACTTAAA+AGG | + | chr6.1:21956553-21956572 | None:intergenic | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | chr6.1:21957239-21957258 | MS.gene52913:CDS | 35.0% | |
GTTACAAATCCATAATGCGA+AGG | - | chr6.1:21957158-21957177 | MS.gene52913:CDS | 35.0% | |
TAATTACTCGGGCTTGTAAT+CGG | + | chr6.1:21956628-21956647 | None:intergenic | 35.0% | |
TATGAGAGGATCATCAACAT+AGG | + | chr6.1:21956346-21956365 | None:intergenic | 35.0% | |
TCCTTCCATCAATGAAATGA+CGG | - | chr6.1:21956459-21956478 | MS.gene52913:CDS | 35.0% | |
TGGATTCGTGTAAACAGATA+TGG | - | chr6.1:21956709-21956728 | MS.gene52913:CDS | 35.0% | |
TTCAAACTTGGAGAAACAAG+AGG | + | chr6.1:21957091-21957110 | None:intergenic | 35.0% | |
TTCTCAAGAACCAAACTAAG+AGG | + | chr6.1:21956232-21956251 | None:intergenic | 35.0% | |
! | AACATCTTTTCACCATCCAT+AGG | + | chr6.1:21956918-21956937 | None:intergenic | 35.0% |
!! | AAAGGTCTGATATTTGCTGT+TGG | - | chr6.1:21956760-21956779 | MS.gene52913:CDS | 35.0% |
!! | TAGTTTGGTTCTTGAGAAGT+TGG | - | chr6.1:21956234-21956253 | MS.gene52913:CDS | 35.0% |
AACTTCCATCCTTCGCATTA+TGG | + | chr6.1:21957170-21957189 | None:intergenic | 40.0% | |
AATTACTCGGGCTTGTAATC+GGG | + | chr6.1:21956627-21956646 | None:intergenic | 40.0% | |
ACACACCGTCATTTCATTGA+TGG | + | chr6.1:21956467-21956486 | None:intergenic | 40.0% | |
ACCGTCATTTCATTGATGGA+AGG | + | chr6.1:21956463-21956482 | None:intergenic | 40.0% | |
ACCTCTCCAATCTGTTTACA+AGG | - | chr6.1:21956585-21956604 | MS.gene52913:CDS | 40.0% | |
ACCTTGTAAACAGATTGGAG+AGG | + | chr6.1:21956589-21956608 | None:intergenic | 40.0% | |
AGAGGATCATCAACATAGGA+TGG | + | chr6.1:21956342-21956361 | None:intergenic | 40.0% | |
AGATCATGTTAGGTTTCGTG+TGG | - | chr6.1:21956267-21956286 | MS.gene52913:CDS | 40.0% | |
AGTACTAGCCATCTCATAAC+AGG | + | chr6.1:21956827-21956846 | None:intergenic | 40.0% | |
AGTTTGCATAAATGCTTGCG+AGG | + | chr6.1:21956949-21956968 | None:intergenic | 40.0% | |
CAAATCCATAATGCGAAGGA+TGG | - | chr6.1:21957162-21957181 | MS.gene52913:CDS | 40.0% | |
CAATATCATTATGGAGGGCA+TGG | - | chr6.1:21956865-21956884 | MS.gene52913:CDS | 40.0% | |
CAATGAAATGACGGTGTGTT+TGG | - | chr6.1:21956468-21956487 | MS.gene52913:CDS | 40.0% | |
CAATTCTGCCTGTTATGAGA+TGG | - | chr6.1:21956816-21956835 | MS.gene52913:CDS | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | chr6.1:21957238-21957257 | MS.gene52913:CDS | 40.0% | |
GTTGAACCCGAAGCTTAAAA+TGG | + | chr6.1:21956797-21956816 | None:intergenic | 40.0% | |
GTTGCAGCGATTTACAATTG+TGG | - | chr6.1:21956652-21956671 | MS.gene52913:CDS | 40.0% | |
TTGTAAACAGATTGGAGAGG+TGG | + | chr6.1:21956586-21956605 | None:intergenic | 40.0% | |
! | GAGACACCATTTTAAGCTTC+GGG | - | chr6.1:21956788-21956807 | MS.gene52913:CDS | 40.0% |
! | GGAGACACCATTTTAAGCTT+CGG | - | chr6.1:21956787-21956806 | MS.gene52913:CDS | 40.0% |
!! | CTGATATTTGCTGTTGGCAA+TGG | - | chr6.1:21956766-21956785 | MS.gene52913:CDS | 40.0% |
AACTTGGAGAAACAAGAGGC+TGG | + | chr6.1:21957087-21957106 | None:intergenic | 45.0% | |
AAGATGTGACATCCGGTTGA+AGG | + | chr6.1:21957217-21957236 | None:intergenic | 45.0% | |
AATCATTGACCGGAGACCTA+TGG | - | chr6.1:21956899-21956918 | MS.gene52913:CDS | 45.0% | |
CAACCGGATGTCACATCTTT+GGG | - | chr6.1:21957218-21957237 | MS.gene52913:CDS | 45.0% | |
CTGCAACCACGTAATTACTC+GGG | + | chr6.1:21956639-21956658 | None:intergenic | 45.0% | |
GAACCCAAAGATGTGACATC+CGG | + | chr6.1:21957224-21957243 | None:intergenic | 45.0% | |
GACATCCGGTTGAAGGAAAT+TGG | + | chr6.1:21957210-21957229 | None:intergenic | 45.0% | |
GCTGCAACCACGTAATTACT+CGG | + | chr6.1:21956640-21956659 | None:intergenic | 45.0% | |
TACAAGCCCGAGTAATTACG+TGG | - | chr6.1:21956630-21956649 | MS.gene52913:CDS | 45.0% | |
TCAACCGGATGTCACATCTT+TGG | - | chr6.1:21957217-21957236 | MS.gene52913:CDS | 45.0% | |
TGTAATCGGGTCATCAGACA+AGG | + | chr6.1:21956614-21956633 | None:intergenic | 45.0% | |
TTTCACCATCCATAGGTCTC+CGG | + | chr6.1:21956911-21956930 | None:intergenic | 45.0% | |
ATTGACCGGAGACCTATGGA+TGG | - | chr6.1:21956903-21956922 | MS.gene52913:CDS | 50.0% | |
TGGAGAGGTGGCAGACTAAT+GGG | + | chr6.1:21956574-21956593 | None:intergenic | 50.0% | |
TTCGTGTGGTGTGCAAGACT+TGG | - | chr6.1:21956281-21956300 | MS.gene52913:CDS | 50.0% | |
TTGGAACTGGACGCTATGAG+TGG | - | chr6.1:21956982-21957001 | MS.gene52913:CDS | 50.0% | |
TTGGAGAGGTGGCAGACTAA+TGG | + | chr6.1:21956575-21956594 | None:intergenic | 50.0% | |
!! | TAGCCATGGTTGGCTTGCAT+TGG | - | chr6.1:21956495-21956514 | MS.gene52913:CDS | 50.0% |
CCACCAATGCAAGCCAACCA+TGG | + | chr6.1:21956501-21956520 | None:intergenic | 55.0% | |
GTGTGTTTGGGCGTTAGCCA+TGG | - | chr6.1:21956481-21956500 | MS.gene52913:CDS | 55.0% | |
GTTTGGGCGTTAGCCATGGT+TGG | - | chr6.1:21956485-21956504 | MS.gene52913:CDS | 55.0% | |
!! | CCATGGTTGGCTTGCATTGG+TGG | - | chr6.1:21956498-21956517 | MS.gene52913:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 21956193 | 21957266 | 21956193 | ID=MS.gene52913 |
chr6.1 | mRNA | 21956193 | 21957266 | 21956193 | ID=MS.gene52913.t1;Parent=MS.gene52913 |
chr6.1 | exon | 21956193 | 21957266 | 21956193 | ID=MS.gene52913.t1.exon1;Parent=MS.gene52913.t1 |
chr6.1 | CDS | 21956193 | 21957266 | 21956193 | ID=cds.MS.gene52913.t1;Parent=MS.gene52913.t1 |
Gene Sequence |
Protein sequence |