Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22964.t1 | XP_003625917.1 | 92.2 | 893 | 67 | 2 | 1 | 893 | 1 | 890 | 0.00E+00 | 1372.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22964.t1 | P87137 | 26.7 | 754 | 435 | 17 | 151 | 849 | 236 | 926 | 2.8e-46 | 188.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22964.t1 | G7KRW4 | 92.2 | 893 | 67 | 2 | 1 | 893 | 1 | 890 | 0.0e+00 | 1372.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene22964 | 0.834473 | 2.94E-56 | -1.69E-46 |
MS.gene049159 | MS.gene22964 | 0.823914 | 1.07E-53 | -1.69E-46 |
MS.gene049190 | MS.gene22964 | 0.82134 | 4.25E-53 | -1.69E-46 |
MS.gene049254 | MS.gene22964 | 0.800424 | 1.45E-48 | -1.69E-46 |
MS.gene049343 | MS.gene22964 | 0.808904 | 2.46E-50 | -1.69E-46 |
MS.gene049441 | MS.gene22964 | 0.803931 | 2.75E-49 | -1.69E-46 |
MS.gene049501 | MS.gene22964 | 0.831358 | 1.75E-55 | -1.69E-46 |
MS.gene049824 | MS.gene22964 | 0.872201 | 3.82E-67 | -1.69E-46 |
MS.gene049825 | MS.gene22964 | 0.874927 | 4.61E-68 | -1.69E-46 |
MS.gene049850 | MS.gene22964 | 0.816444 | 5.51E-52 | -1.69E-46 |
MS.gene049873 | MS.gene22964 | 0.86546 | 5.81E-65 | -1.69E-46 |
MS.gene050156 | MS.gene22964 | 0.807759 | 4.32E-50 | -1.69E-46 |
MS.gene050303 | MS.gene22964 | 0.808331 | 3.26E-50 | -1.69E-46 |
MS.gene050355 | MS.gene22964 | 0.802873 | 4.56E-49 | -1.69E-46 |
MS.gene050427 | MS.gene22964 | 0.80298 | 4.34E-49 | -1.69E-46 |
MS.gene050443 | MS.gene22964 | 0.811622 | 6.39E-51 | -1.69E-46 |
MS.gene05045 | MS.gene22964 | 0.809738 | 1.63E-50 | -1.69E-46 |
MS.gene050689 | MS.gene22964 | 0.805892 | 1.07E-49 | -1.69E-46 |
MS.gene050719 | MS.gene22964 | 0.812518 | 4.07E-51 | -1.69E-46 |
MS.gene050721 | MS.gene22964 | 0.816903 | 4.35E-52 | -1.69E-46 |
MS.gene050844 | MS.gene22964 | 0.826713 | 2.33E-54 | -1.69E-46 |
MS.gene051247 | MS.gene22964 | 0.828432 | 9.02E-55 | -1.69E-46 |
MS.gene051700 | MS.gene22964 | 0.838858 | 2.24E-57 | -1.69E-46 |
MS.gene051719 | MS.gene22964 | 0.801822 | 7.51E-49 | -1.69E-46 |
MS.gene051744 | MS.gene22964 | 0.877203 | 7.59E-69 | -1.69E-46 |
MS.gene051791 | MS.gene22964 | 0.813325 | 2.71E-51 | -1.69E-46 |
MS.gene05188 | MS.gene22964 | 0.803266 | 3.78E-49 | -1.69E-46 |
MS.gene051975 | MS.gene22964 | 0.806269 | 8.93E-50 | -1.69E-46 |
MS.gene052012 | MS.gene22964 | 0.816982 | 4.18E-52 | -1.69E-46 |
MS.gene052020 | MS.gene22964 | 0.831713 | 1.43E-55 | -1.69E-46 |
MS.gene052516 | MS.gene22964 | 0.818666 | 1.74E-52 | -1.69E-46 |
MS.gene052519 | MS.gene22964 | 0.835821 | 1.34E-56 | -1.69E-46 |
MS.gene052582 | MS.gene22964 | 0.811252 | 7.68E-51 | -1.69E-46 |
MS.gene052584 | MS.gene22964 | 0.833227 | 6.02E-56 | -1.69E-46 |
MS.gene052611 | MS.gene22964 | 0.826879 | 2.13E-54 | -1.69E-46 |
MS.gene052773 | MS.gene22964 | 0.817985 | 2.48E-52 | -1.69E-46 |
MS.gene052863 | MS.gene22964 | 0.828152 | 1.05E-54 | -1.69E-46 |
MS.gene052896 | MS.gene22964 | 0.833769 | 4.41E-56 | -1.69E-46 |
MS.gene053008 | MS.gene22964 | 0.8047 | 1.90E-49 | -1.69E-46 |
MS.gene053080 | MS.gene22964 | 0.806006 | 1.01E-49 | -1.69E-46 |
MS.gene053122 | MS.gene22964 | 0.828486 | 8.75E-55 | -1.69E-46 |
MS.gene053144 | MS.gene22964 | 0.81567 | 8.21E-52 | -1.69E-46 |
MS.gene053226 | MS.gene22964 | 0.889813 | 1.73E-73 | -1.69E-46 |
MS.gene05364 | MS.gene22964 | 0.806806 | 6.88E-50 | -1.69E-46 |
MS.gene053966 | MS.gene22964 | 0.803837 | 2.88E-49 | -1.69E-46 |
MS.gene053995 | MS.gene22964 | 0.80935 | 1.98E-50 | -1.69E-46 |
MS.gene054576 | MS.gene22964 | 0.807437 | 5.06E-50 | -1.69E-46 |
MS.gene054584 | MS.gene22964 | 0.816352 | 5.78E-52 | -1.69E-46 |
MS.gene05458 | MS.gene22964 | 0.803624 | 3.19E-49 | -1.69E-46 |
MS.gene054651 | MS.gene22964 | 0.837609 | 4.70E-57 | -1.69E-46 |
MS.gene054775 | MS.gene22964 | 0.817968 | 2.50E-52 | -1.69E-46 |
MS.gene054967 | MS.gene22964 | 0.820404 | 6.98E-53 | -1.69E-46 |
MS.gene055465 | MS.gene22964 | 0.80287 | 4.57E-49 | -1.69E-46 |
MS.gene055466 | MS.gene22964 | 0.827599 | 1.43E-54 | -1.69E-46 |
MS.gene055468 | MS.gene22964 | 0.817948 | 2.53E-52 | -1.69E-46 |
MS.gene055512 | MS.gene22964 | 0.835122 | 2.02E-56 | -1.69E-46 |
MS.gene055513 | MS.gene22964 | 0.821327 | 4.28E-53 | -1.69E-46 |
MS.gene055580 | MS.gene22964 | -0.842552 | 2.41E-58 | -1.69E-46 |
MS.gene055778 | MS.gene22964 | 0.850234 | 1.94E-60 | -1.69E-46 |
MS.gene055808 | MS.gene22964 | 0.833697 | 4.60E-56 | -1.69E-46 |
MS.gene055818 | MS.gene22964 | 0.805037 | 1.62E-49 | -1.69E-46 |
MS.gene056043 | MS.gene22964 | -0.833466 | 5.25E-56 | -1.69E-46 |
MS.gene056050 | MS.gene22964 | 0.813335 | 2.70E-51 | -1.69E-46 |
MS.gene056091 | MS.gene22964 | 0.828771 | 7.47E-55 | -1.69E-46 |
MS.gene056215 | MS.gene22964 | 0.811157 | 8.05E-51 | -1.69E-46 |
MS.gene056366 | MS.gene22964 | 0.827443 | 1.56E-54 | -1.69E-46 |
MS.gene056373 | MS.gene22964 | 0.81201 | 5.26E-51 | -1.69E-46 |
MS.gene056403 | MS.gene22964 | 0.815169 | 1.06E-51 | -1.69E-46 |
MS.gene056553 | MS.gene22964 | 0.828645 | 8.01E-55 | -1.69E-46 |
MS.gene056595 | MS.gene22964 | 0.801704 | 7.94E-49 | -1.69E-46 |
MS.gene056605 | MS.gene22964 | 0.800589 | 1.34E-48 | -1.69E-46 |
MS.gene056631 | MS.gene22964 | 0.801552 | 8.53E-49 | -1.69E-46 |
MS.gene05686 | MS.gene22964 | 0.812249 | 4.66E-51 | -1.69E-46 |
MS.gene05690 | MS.gene22964 | 0.807158 | 5.79E-50 | -1.69E-46 |
MS.gene056986 | MS.gene22964 | 0.804068 | 2.58E-49 | -1.69E-46 |
MS.gene057140 | MS.gene22964 | 0.80096 | 1.13E-48 | -1.69E-46 |
MS.gene057314 | MS.gene22964 | 0.803838 | 2.88E-49 | -1.69E-46 |
MS.gene057360 | MS.gene22964 | 0.819502 | 1.12E-52 | -1.69E-46 |
MS.gene057693 | MS.gene22964 | 0.806481 | 8.06E-50 | -1.69E-46 |
MS.gene057915 | MS.gene22964 | 0.837782 | 4.24E-57 | -1.69E-46 |
MS.gene058037 | MS.gene22964 | 0.822767 | 1.99E-53 | -1.69E-46 |
MS.gene058084 | MS.gene22964 | 0.800159 | 1.64E-48 | -1.69E-46 |
MS.gene058625 | MS.gene22964 | 0.841529 | 4.50E-58 | -1.69E-46 |
MS.gene058636 | MS.gene22964 | 0.806963 | 6.37E-50 | -1.69E-46 |
MS.gene058783 | MS.gene22964 | 0.800549 | 1.37E-48 | -1.69E-46 |
MS.gene058829 | MS.gene22964 | 0.805162 | 1.52E-49 | -1.69E-46 |
MS.gene058906 | MS.gene22964 | 0.80266 | 5.05E-49 | -1.69E-46 |
MS.gene058979 | MS.gene22964 | 0.813947 | 1.98E-51 | -1.69E-46 |
MS.gene059084 | MS.gene22964 | 0.809148 | 2.18E-50 | -1.69E-46 |
MS.gene05954 | MS.gene22964 | 0.815608 | 8.47E-52 | -1.69E-46 |
MS.gene059625 | MS.gene22964 | 0.838355 | 3.02E-57 | -1.69E-46 |
MS.gene05978 | MS.gene22964 | 0.807871 | 4.09E-50 | -1.69E-46 |
MS.gene059842 | MS.gene22964 | 0.827741 | 1.32E-54 | -1.69E-46 |
MS.gene059935 | MS.gene22964 | 0.823223 | 1.55E-53 | -1.69E-46 |
MS.gene06001 | MS.gene22964 | 0.805549 | 1.27E-49 | -1.69E-46 |
MS.gene060101 | MS.gene22964 | 0.808141 | 3.58E-50 | -1.69E-46 |
MS.gene060429 | MS.gene22964 | 0.842529 | 2.45E-58 | -1.69E-46 |
MS.gene060586 | MS.gene22964 | 0.801037 | 1.09E-48 | -1.69E-46 |
MS.gene060587 | MS.gene22964 | 0.82536 | 4.89E-54 | -1.69E-46 |
MS.gene060763 | MS.gene22964 | 0.813696 | 2.25E-51 | -1.69E-46 |
MS.gene060830 | MS.gene22964 | 0.813009 | 3.18E-51 | -1.69E-46 |
MS.gene060935 | MS.gene22964 | 0.804926 | 1.71E-49 | -1.69E-46 |
MS.gene06094 | MS.gene22964 | 0.824951 | 6.11E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene22964 | MS.gene015586 | PPI |
MS.gene034624 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene019309 | PPI |
MS.gene063568 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene033253 | PPI |
MS.gene76511 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene39202 | PPI |
MS.gene36329 | MS.gene22964 | PPI |
MS.gene02213 | MS.gene22964 | PPI |
MS.gene85127 | MS.gene22964 | PPI |
MS.gene56868 | MS.gene22964 | PPI |
MS.gene063209 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene48368 | PPI |
MS.gene060830 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene50744 | PPI |
MS.gene22964 | MS.gene072782 | PPI |
MS.gene22964 | MS.gene002256 | PPI |
MS.gene47800 | MS.gene22964 | PPI |
MS.gene01229 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene053381 | PPI |
MS.gene46486 | MS.gene22964 | PPI |
MS.gene003693 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene65479 | PPI |
MS.gene029825 | MS.gene22964 | PPI |
MS.gene22964 | MS.gene23314 | PPI |
MS.gene75013 | MS.gene22964 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22964.t1 | MTR_7g108730 | 93.841 | 893 | 52 | 2 | 1 | 893 | 1 | 890 | 0.0 | 1559 |
MS.gene22964.t1 | MTR_3g113240 | 80.294 | 883 | 114 | 12 | 1 | 873 | 1 | 833 | 0.0 | 1292 |
MS.gene22964.t1 | MTR_8g058740 | 92.219 | 347 | 27 | 0 | 146 | 492 | 23 | 369 | 0.0 | 605 |
MS.gene22964.t1 | MTR_7g091790 | 51.453 | 585 | 209 | 20 | 1 | 578 | 1 | 517 | 7.30e-136 | 421 |
MS.gene22964.t1 | MTR_7g091790 | 56.180 | 267 | 95 | 5 | 587 | 848 | 429 | 678 | 2.39e-81 | 276 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22964.t1 | AT4G02400 | 47.811 | 891 | 407 | 18 | 19 | 891 | 5 | 855 | 0.0 | 693 |
MS.gene22964.t1 | AT5G08600 | 45.550 | 854 | 394 | 19 | 19 | 857 | 8 | 805 | 0.0 | 612 |
MS.gene22964.t1 | AT5G08600 | 44.532 | 887 | 408 | 20 | 19 | 877 | 8 | 838 | 0.0 | 604 |
MS.gene22964.t1 | AT5G08600 | 40.154 | 650 | 323 | 18 | 19 | 658 | 8 | 601 | 1.31e-112 | 358 |
Find 179 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCCTATTTCTCTGAATA+AGG | 0.222756 | 7.3:-6134126 | None:intergenic |
ATGAAAGTTCCCAGAGAAAA+AGG | 0.230480 | 7.3:+6137160 | MS.gene22964:CDS |
CCATGTATCTGAGGCAAATA+TGG | 0.232475 | 7.3:-6136568 | None:intergenic |
CCTCTGGCGTTCTTGTTTCA+TGG | 0.236132 | 7.3:-6135299 | None:intergenic |
TTCTTTCTAGATTCTTCTTC+AGG | 0.247261 | 7.3:-6133383 | None:intergenic |
AGAAGTCTTCAAAGTTTAAT+AGG | 0.252682 | 7.3:+6136743 | MS.gene22964:CDS |
ATTCCTCTCAAATTTAGTTC+TGG | 0.253669 | 7.3:-6134224 | None:intergenic |
ACCAGTGGCAGAAGAGTATT+TGG | 0.256001 | 7.3:+6136189 | MS.gene22964:CDS |
TATTATCAGCACCAATTGTT+TGG | 0.264258 | 7.3:-6136224 | None:intergenic |
AACAATTGGTGCTGATAATA+AGG | 0.264486 | 7.3:+6136227 | MS.gene22964:CDS |
ATTGACTCTGATGATGATTC+TGG | 0.264836 | 7.3:+6133604 | MS.gene22964:CDS |
GAATAAATAATTACCATAAA+AGG | 0.270343 | 7.3:-6135726 | None:intergenic |
AACCCCTTATTCAGAGAAAT+AGG | 0.271086 | 7.3:+6134122 | MS.gene22964:CDS |
CCACTGGTAGATGCTACTTT+TGG | 0.288858 | 7.3:-6136174 | None:intergenic |
CAATTTGTTGATTTCTTAAC+CGG | 0.305399 | 7.3:-6133994 | None:intergenic |
GCCTCTATTACTTCCTGGTT+GGG | 0.307969 | 7.3:+6137080 | MS.gene22964:CDS |
TACTTCCTGGTTGGGGTCAA+TGG | 0.313460 | 7.3:+6137088 | MS.gene22964:CDS |
TTTGATGAAAAGACAGATCT+AGG | 0.330885 | 7.3:+6134163 | MS.gene22964:CDS |
TGCCTCAGATACATGGAAAA+AGG | 0.332114 | 7.3:+6136575 | MS.gene22964:CDS |
GGCTTTGCTATCATTGCCTT+TGG | 0.332623 | 7.3:-6138789 | None:intergenic |
ACCTTTACATCGTGCCTAAC+AGG | 0.337743 | 7.3:-6136766 | None:intergenic |
TTCCTCTCAAATTTAGTTCT+GGG | 0.338005 | 7.3:-6134223 | None:intergenic |
GCATATTCATTAGCAGCTTC+AGG | 0.339373 | 7.3:-6135277 | None:intergenic |
AGTTCATCATGACAAAATTA+TGG | 0.340220 | 7.3:+6134258 | MS.gene22964:CDS |
CTCCCTATTTCTCTGAATAA+GGG | 0.343945 | 7.3:-6134125 | None:intergenic |
TAACAGACGATGATATGTTT+TGG | 0.345941 | 7.3:-6135209 | None:intergenic |
GAGAAGCCTCTATTACTTCC+TGG | 0.348985 | 7.3:+6137075 | MS.gene22964:CDS |
AAGACATCTTTGGAAGTATA+AGG | 0.349436 | 7.3:-6138309 | None:intergenic |
CAAAGTTTAATAGGCCTGTT+AGG | 0.350326 | 7.3:+6136752 | MS.gene22964:CDS |
ACGAGGAACTGACTAGAAAA+AGG | 0.357806 | 7.3:+6135529 | MS.gene22964:CDS |
TCTAACCCGGCAACTACATT+TGG | 0.361095 | 7.3:+6138366 | MS.gene22964:CDS |
AAAATCTTGTTTGCCTTATC+CGG | 0.361359 | 7.3:-6135627 | None:intergenic |
GTAGTTGCCGGGTTAGATTC+AGG | 0.370277 | 7.3:-6138360 | None:intergenic |
ATTATCAGCACCAATTGTTT+GGG | 0.370353 | 7.3:-6136223 | None:intergenic |
GATCGTCACGAAGAGGATTA+AGG | 0.372975 | 7.3:-6133955 | None:intergenic |
AGAATCCTCCAGCTTCTTCA+TGG | 0.403400 | 7.3:-6136136 | None:intergenic |
ACCTTCGCTTGATCTGCCTT+TGG | 0.407519 | 7.3:-6134049 | None:intergenic |
AGCATCCTTTCTCTTCTTGA+GGG | 0.407735 | 7.3:-6137190 | None:intergenic |
CTTCATATTCTTGTACAGTA+AGG | 0.410508 | 7.3:-6136110 | None:intergenic |
TATAAAACCGATAGAATTTG+AGG | 0.410968 | 7.3:+6138700 | MS.gene22964:CDS |
AACTAAATTTGAGAGGAATA+TGG | 0.412942 | 7.3:+6134228 | MS.gene22964:CDS |
CCATATTTGCCTCAGATACA+TGG | 0.414348 | 7.3:+6136568 | MS.gene22964:CDS |
GACAATCAACGGAAGAAAAC+CGG | 0.418141 | 7.3:+6133254 | MS.gene22964:CDS |
GAGGAAGAATGATGTTATTC+CGG | 0.419305 | 7.3:+6133856 | MS.gene22964:CDS |
TGCTTGATAGGTTTCTATAA+AGG | 0.420322 | 7.3:+6135096 | MS.gene22964:intron |
ACACTCTGTTGCCGCTGCTC+TGG | 0.420778 | 7.3:-6138743 | None:intergenic |
AGAGGTCCAAATGTAGTTGC+CGG | 0.421778 | 7.3:-6138372 | None:intergenic |
CATCTCAAGAGGAGCTCATT+CGG | 0.423337 | 7.3:+6136971 | MS.gene22964:CDS |
GAGCATCCTTTCTCTTCTTG+AGG | 0.426017 | 7.3:-6137191 | None:intergenic |
TGACCTTTCTTCTGATTTCG+AGG | 0.434404 | 7.3:+6133442 | MS.gene22964:CDS |
TTATTATCATTGACAGAGAC+AGG | 0.436439 | 7.3:-6133419 | None:intergenic |
TCGATTTCATCAACATCAAC+AGG | 0.444833 | 7.3:-6133329 | None:intergenic |
GTTAAAGAAAGTTAGATTGA+AGG | 0.445755 | 7.3:+6135228 | MS.gene22964:CDS |
TATTTAATCTTACCATCAAA+AGG | 0.447132 | 7.3:-6133688 | None:intergenic |
CTACATTTGGACCTCTTACT+CGG | 0.449943 | 7.3:+6138379 | MS.gene22964:CDS |
GCTTGATCTGCCTTTGGAAG+TGG | 0.453063 | 7.3:-6134043 | None:intergenic |
AGGATGTTACAAAGAATTAC+CGG | 0.459680 | 7.3:+6133652 | MS.gene22964:CDS |
AGCCTCTATTACTTCCTGGT+TGG | 0.459722 | 7.3:+6137079 | MS.gene22964:CDS |
ACTCTGATGAAAGACATCTT+TGG | 0.462745 | 7.3:-6138319 | None:intergenic |
ATGGCTAAAGCCCAAACAAT+TGG | 0.467988 | 7.3:+6136213 | MS.gene22964:CDS |
TGCTGATTCTGATCCGGATA+AGG | 0.468993 | 7.3:+6135614 | MS.gene22964:CDS |
CAGGAGTAGGGTTTAAATGT+TGG | 0.476419 | 7.3:-6133310 | None:intergenic |
ATCACTGCTGCTACTGTCCA+TGG | 0.477773 | 7.3:-6135556 | None:intergenic |
TTGACTCTGATGATGATTCT+GGG | 0.479242 | 7.3:+6133605 | MS.gene22964:CDS |
GGAAGTAATAGAGGCTTCTC+AGG | 0.479287 | 7.3:-6137072 | None:intergenic |
AGAGTCTTCTCAGTTGGAAA+TGG | 0.480279 | 7.3:+6135252 | MS.gene22964:CDS |
TGAAGATTCCATGAAGAAGC+TGG | 0.480768 | 7.3:+6136128 | MS.gene22964:CDS |
CGCTGCTCTGGTTTATCGTG+AGG | 0.482465 | 7.3:-6138731 | None:intergenic |
TAAAGATAGCAATCCCGACT+TGG | 0.484286 | 7.3:-6135703 | None:intergenic |
CCCCAACCAGGAAGTAATAG+AGG | 0.486131 | 7.3:-6137081 | None:intergenic |
ACAAAAGACACTAGAAGTGC+TGG | 0.486241 | 7.3:+6135662 | MS.gene22964:CDS |
ACCCCTTATTCAGAGAAATA+GGG | 0.486296 | 7.3:+6134123 | MS.gene22964:CDS |
TCATCAACATCAACAGGAGT+AGG | 0.489154 | 7.3:-6133323 | None:intergenic |
AAAAGAAAGGTTTACCATCC+TGG | 0.489615 | 7.3:+6137124 | MS.gene22964:CDS |
TTCACTTCCTCAAATTCTAT+CGG | 0.489667 | 7.3:-6138707 | None:intergenic |
GATGATGAAATGCCCAAGTC+GGG | 0.491051 | 7.3:+6135690 | MS.gene22964:CDS |
CTTACTTCAGGCCGAGTAAG+AGG | 0.491319 | 7.3:-6138390 | None:intergenic |
CAGAGTATGCGTATGCCCAT+TGG | 0.493073 | 7.3:+6138336 | MS.gene22964:CDS |
AACCGGAGTCTTGAATGATC+AGG | 0.493279 | 7.3:-6133977 | None:intergenic |
TGAGATGGAAGTTCATAAGA+TGG | 0.495179 | 7.3:-6136955 | None:intergenic |
GCCTGTTAGGCACGATGTAA+AGG | 0.499377 | 7.3:+6136765 | MS.gene22964:CDS |
GGCTCCGCAATTTAGCAGCC+TGG | 0.501451 | 7.3:-6135138 | None:intergenic |
CGGGTTAGATTCAGGTCCAA+TGG | 0.503979 | 7.3:-6138352 | None:intergenic |
GCAACGTGGTTTAGATAAGC+AGG | 0.506637 | 7.3:+6135464 | MS.gene22964:CDS |
AATAGAGGCTTCTCAGGCTC+GGG | 0.507163 | 7.3:-6137066 | None:intergenic |
TTCATGTTCTTTGACCATCC+AGG | 0.508099 | 7.3:-6137142 | None:intergenic |
CCTCTATTACTTCCTGGTTG+GGG | 0.511255 | 7.3:+6137081 | MS.gene22964:CDS |
AAGTGGCAACATTGAGAATG+AGG | 0.513026 | 7.3:+6136308 | MS.gene22964:CDS |
TAATAGAGGCTTCTCAGGCT+CGG | 0.513747 | 7.3:-6137067 | None:intergenic |
TCCAAATACTCTTCTGCCAC+TGG | 0.516839 | 7.3:-6136190 | None:intergenic |
AAAAGGCTTGCTCGGCATAC+CGG | 0.517139 | 7.3:-6133671 | None:intergenic |
CATCAACATCAACAGGAGTA+GGG | 0.517223 | 7.3:-6133322 | None:intergenic |
TGATAGCGAGGATGACTTTG+AGG | 0.518712 | 7.3:+6136278 | MS.gene22964:CDS |
GAAGGCAGAGTCTTCTCAGT+TGG | 0.520406 | 7.3:+6135246 | MS.gene22964:CDS |
TTGATGAAAAGACAGATCTA+GGG | 0.527190 | 7.3:+6134164 | MS.gene22964:CDS |
AGATGAAGGCAAACGAGGAC+CGG | 0.528426 | 7.3:-6133273 | None:intergenic |
TTACCATCAAAAGGCTTGCT+CGG | 0.529348 | 7.3:-6133679 | None:intergenic |
AAGTCGAAGTTGAAGGTCAA+GGG | 0.530154 | 7.3:+6138818 | MS.gene22964:CDS |
TGTGGTATAGAGGCGTGGAT+TGG | 0.534234 | 7.3:+6136053 | MS.gene22964:intron |
CAGATCAAGCGAAGGTGGAA+AGG | 0.534540 | 7.3:+6134056 | MS.gene22964:CDS |
ATACCTCGAAATCAGAAGAA+AGG | 0.536953 | 7.3:-6133445 | None:intergenic |
TAATCCTAGTCACGATGTTG+TGG | 0.538812 | 7.3:+6133901 | MS.gene22964:CDS |
GAATGCTGCTGATTCTGATC+CGG | 0.540001 | 7.3:+6135608 | MS.gene22964:CDS |
ACATATATACCTCAGCCCTC+TGG | 0.540183 | 7.3:-6135315 | None:intergenic |
ACTGATATACAGCAAAAGAA+AGG | 0.541411 | 7.3:+6137111 | MS.gene22964:CDS |
GACTTTGAGGCCAAGAAAAG+TGG | 0.542359 | 7.3:+6136291 | MS.gene22964:CDS |
TCTTTGGAAGTATAAGGAAA+AGG | 0.548729 | 7.3:-6138303 | None:intergenic |
TCTATAAAGGATGAGAAGGA+TGG | 0.549986 | 7.3:+6135109 | MS.gene22964:CDS |
GGGTTAGATTCAGGTCCAAT+GGG | 0.550457 | 7.3:-6138351 | None:intergenic |
AGAAGCCCTCAAGAAGAGAA+AGG | 0.556911 | 7.3:+6137185 | MS.gene22964:CDS |
ATCAGCAGCATTCTCATCAT+CGG | 0.557010 | 7.3:-6135598 | None:intergenic |
GAGGTCCAAATGTAGTTGCC+GGG | 0.559756 | 7.3:-6138371 | None:intergenic |
TCCCTATTTCTCTGAATAAG+GGG | 0.561919 | 7.3:-6134124 | None:intergenic |
AAAGTCGAAGTTGAAGGTCA+AGG | 0.563646 | 7.3:+6138817 | MS.gene22964:CDS |
GAGAAGAAGCGAAATGAAAG+AGG | 0.563959 | 7.3:+6133182 | MS.gene22964:CDS |
CTCTGAGAAATCAAGCAAGA+AGG | 0.565144 | 7.3:+6137233 | MS.gene22964:CDS |
TCAGACTCTAGATATAGCTC+CGG | 0.566700 | 7.3:-6133875 | None:intergenic |
AACCCAGAACTAAATTTGAG+AGG | 0.568491 | 7.3:+6134221 | MS.gene22964:CDS |
TGAGAAGGATGGGCATAACC+AGG | 0.568538 | 7.3:+6135120 | MS.gene22964:CDS |
ACAAGAACGCCAGAGGGCTG+AGG | 0.569776 | 7.3:+6135306 | MS.gene22964:CDS |
GATGAAGGACAGATGGTGGA+TGG | 0.571626 | 7.3:+6136910 | MS.gene22964:CDS |
AGAAGACTTCCGACAATCAA+CGG | 0.578262 | 7.3:+6133243 | MS.gene22964:CDS |
TCATATCGTAGGCAATAAGA+AGG | 0.579455 | 7.3:+6133832 | MS.gene22964:intron |
CACGATGTTGTGGAAGGTGA+TGG | 0.580194 | 7.3:+6133911 | MS.gene22964:CDS |
GGTTTAGATAAGCAGGATGA+AGG | 0.580805 | 7.3:+6135471 | MS.gene22964:CDS |
CTATAAAGGATGAGAAGGAT+GGG | 0.581490 | 7.3:+6135110 | MS.gene22964:CDS |
AAAGGCAGATCAAGCGAAGG+TGG | 0.582891 | 7.3:+6134051 | MS.gene22964:CDS |
GGTTTCTATAAAGGATGAGA+AGG | 0.584067 | 7.3:+6135105 | MS.gene22964:intron |
TTATGAACTTCCATCTCAAG+AGG | 0.584960 | 7.3:+6136960 | MS.gene22964:CDS |
AAAGATAGCAATCCCGACTT+GGG | 0.584979 | 7.3:-6135702 | None:intergenic |
TCAAGCGAAGGTGGAAAGGA+AGG | 0.585407 | 7.3:+6134060 | MS.gene22964:CDS |
CGAATGAGCTCCTCTTGAGA+TGG | 0.586031 | 7.3:-6136970 | None:intergenic |
CAAAGAAACAAGTCACAAAG+TGG | 0.588340 | 7.3:+6134098 | MS.gene22964:CDS |
GACGCCAACAACCGCCACAC+CGG | 0.588426 | 7.3:+6133206 | MS.gene22964:CDS |
CCTTCCACAACATCGTGACT+AGG | 0.590447 | 7.3:-6133905 | None:intergenic |
TACAGATGATGAAGGACAGA+TGG | 0.590901 | 7.3:+6136903 | MS.gene22964:CDS |
GATAGCGATACAGATGATGA+AGG | 0.593448 | 7.3:+6136895 | MS.gene22964:CDS |
CATTGGACCTGAATCTAACC+CGG | 0.599340 | 7.3:+6138353 | MS.gene22964:CDS |
AAGAAGTTGAATAGAACCAA+AGG | 0.600324 | 7.3:+6138773 | MS.gene22964:CDS |
GAAAGGTTTACCATCCTGGA+TGG | 0.600524 | 7.3:+6137128 | MS.gene22964:CDS |
TTCAAAGATGAAGGCAAACG+AGG | 0.601593 | 7.3:-6133278 | None:intergenic |
TGTTCATGCACCACTTCCAA+AGG | 0.604646 | 7.3:+6134033 | MS.gene22964:CDS |
ATCCTGATCATTCAAGACTC+CGG | 0.607138 | 7.3:+6133975 | MS.gene22964:CDS |
AGATGATGAAATGCCCAAGT+CGG | 0.607430 | 7.3:+6135689 | MS.gene22964:CDS |
CCTAGTCACGATGTTGTGGA+AGG | 0.607641 | 7.3:+6133905 | MS.gene22964:CDS |
ATAACCAGGCTGCTAAATTG+CGG | 0.608153 | 7.3:+6135134 | MS.gene22964:CDS |
AAGATGATGAGAGACATGAA+AGG | 0.617021 | 7.3:+6133632 | MS.gene22964:CDS |
AAGAAGCTGGAGGATTCTGA+TGG | 0.618164 | 7.3:+6136141 | MS.gene22964:CDS |
TCTTTGAAAATGTTCAGTCA+CGG | 0.619063 | 7.3:-6135505 | None:intergenic |
GTGCAGGTGGTGAAGAAACC+AGG | 0.621465 | 7.3:+6138671 | MS.gene22964:intron |
TGTTCTTTGACCATCCAGGA+TGG | 0.625183 | 7.3:-6137138 | None:intergenic |
CTCTGATGATGATTCTGGGG+AGG | 0.628586 | 7.3:+6133609 | MS.gene22964:CDS |
GGGAAGTGATCATCTGCAGA+AGG | 0.630064 | 7.3:+6136329 | MS.gene22964:CDS |
GACACAAACACAAAAGTCCA+TGG | 0.630633 | 7.3:+6135427 | MS.gene22964:CDS |
TCAGTCCATTGACCCCAACC+AGG | 0.630731 | 7.3:-6137093 | None:intergenic |
CAATCTGATGATGACGACGA+CGG | 0.632821 | 7.3:+6133550 | MS.gene22964:CDS |
TGACTCTGATGATGATTCTG+GGG | 0.636517 | 7.3:+6133606 | MS.gene22964:CDS |
AGATGATGAAGGACAGATGG+TGG | 0.637774 | 7.3:+6136906 | MS.gene22964:CDS |
CATGAAACAAGAACGCCAGA+GGG | 0.639643 | 7.3:+6135300 | MS.gene22964:CDS |
AATTGGTGCTGATAATAAGG+TGG | 0.640246 | 7.3:+6136230 | MS.gene22964:CDS |
TGGCAGAAGAGTATTTGGAA+TGG | 0.644354 | 7.3:+6136194 | MS.gene22964:CDS |
TTACGATAACAGTGATAGCG+AGG | 0.650293 | 7.3:+6136266 | MS.gene22964:CDS |
TGATCAGGATCGTCACGAAG+AGG | 0.652108 | 7.3:-6133962 | None:intergenic |
TCCAAAGGCAGATCAAGCGA+AGG | 0.655899 | 7.3:+6134048 | MS.gene22964:CDS |
CCATGAAACAAGAACGCCAG+AGG | 0.656373 | 7.3:+6135299 | MS.gene22964:CDS |
AGTGGCAACATTGAGAATGA+GGG | 0.656546 | 7.3:+6136309 | MS.gene22964:CDS |
AGCGAAGGTGGAAAGGAAGG+TGG | 0.656706 | 7.3:+6134063 | MS.gene22964:CDS |
TCGTAGGCAATAAGAAGGCG+AGG | 0.658257 | 7.3:+6133837 | MS.gene22964:intron |
TTTGTTGTGGTATAGAGGCG+TGG | 0.661646 | 7.3:+6136048 | MS.gene22964:intron |
TGATGGACGAATTACTATCG+AGG | 0.680624 | 7.3:+6133928 | MS.gene22964:CDS |
TATTATCATTGACAGAGACA+GGG | 0.681643 | 7.3:-6133418 | None:intergenic |
AAAGACACTAGAAGTGCTGG+AGG | 0.683825 | 7.3:+6135665 | MS.gene22964:CDS |
TAGTCTTCTTGACATGAACA+AGG | 0.684381 | 7.3:+6134303 | MS.gene22964:CDS |
AGATTCCATGAAGAAGCTGG+AGG | 0.687128 | 7.3:+6136131 | MS.gene22964:CDS |
CCTTATTCAGAGAAATAGGG+AGG | 0.695528 | 7.3:+6134126 | MS.gene22964:CDS |
CTCACGATAAACCAGAGCAG+CGG | 0.696038 | 7.3:+6138732 | MS.gene22964:CDS |
CGTCACGAAGAGGATTAAGG+AGG | 0.705412 | 7.3:-6133952 | None:intergenic |
CTTCAGCGTAAAATGCAACG+TGG | 0.719561 | 7.3:+6135450 | MS.gene22964:CDS |
CCAAAAGTAGCATCTACCAG+TGG | 0.721080 | 7.3:+6136174 | MS.gene22964:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAAATTTGTAAAAAGTT+TGG | - | chr7.3:6137525-6137544 | None:intergenic | 10.0% |
!! | CTCTTAACTAATTTAAATAA+AGG | - | chr7.3:6138485-6138504 | None:intergenic | 15.0% |
!! | GAATAAATAATTACCATAAA+AGG | - | chr7.3:6135729-6135748 | None:intergenic | 15.0% |
!! | TAAATTTCAAAATTCAAACA+TGG | + | chr7.3:6134528-6134547 | MS.gene22964:intron | 15.0% |
!! | TATATAATTTAGTGTATGTT+CGG | + | chr7.3:6137897-6137916 | MS.gene22964:intron | 15.0% |
!! | TTGATTTATACATAAATGTA+TGG | + | chr7.3:6138121-6138140 | MS.gene22964:intron | 15.0% |
!!! | AATATATACTTTTGAAATGT+TGG | - | chr7.3:6137579-6137598 | None:intergenic | 15.0% |
!!! | AGCATAAAATCATAAATTTT+TGG | + | chr7.3:6134877-6134896 | MS.gene22964:intron | 15.0% |
!!! | GCATAAAATCATAAATTTTT+GGG | + | chr7.3:6134878-6134897 | MS.gene22964:intron | 15.0% |
!!! | TTTAATTTTTATCATATCGT+AGG | + | chr7.3:6133821-6133840 | MS.gene22964:intron | 15.0% |
!! | AAATGAAAATTCAAGACATT+TGG | - | chr7.3:6134466-6134485 | None:intergenic | 20.0% |
!! | AACAATTCAGTTTATATTCT+TGG | - | chr7.3:6136810-6136829 | None:intergenic | 20.0% |
!! | AAGAATATAAACTGAATTGT+TGG | + | chr7.3:6136809-6136828 | MS.gene22964:intron | 20.0% |
!! | AATGAAAATTCAAGACATTT+GGG | - | chr7.3:6134465-6134484 | None:intergenic | 20.0% |
!! | AATTAGTTAAGAGTGATATT+TGG | + | chr7.3:6138492-6138511 | MS.gene22964:intron | 20.0% |
!! | ATAAAGAAGAAAAAAATCAG+TGG | - | chr7.3:6137485-6137504 | None:intergenic | 20.0% |
!! | CAAAAGAATAAAATCAAAAC+CGG | - | chr7.3:6138246-6138265 | None:intergenic | 20.0% |
!! | CAATGTTGATGTTTATAATT+CGG | - | chr7.3:6137301-6137320 | None:intergenic | 20.0% |
!! | CATATATGTTATTACATTGA+TGG | - | chr7.3:6134927-6134946 | None:intergenic | 20.0% |
!! | TAAAAGAAGATAAATGTTCT+TGG | + | chr7.3:6135356-6135375 | MS.gene22964:intron | 20.0% |
!! | TATATATTATGCTCTAATGT+TGG | + | chr7.3:6137591-6137610 | MS.gene22964:intron | 20.0% |
!! | TATTTAATCTTACCATCAAA+AGG | - | chr7.3:6133691-6133710 | None:intergenic | 20.0% |
!! | TCATAAACAACAAAAAACAA+CGG | - | chr7.3:6135076-6135095 | None:intergenic | 20.0% |
!! | TGATGATAAACACAAATAAA+AGG | - | chr7.3:6138449-6138468 | None:intergenic | 20.0% |
!! | TTTATGTAATTTATGTTAGC+TGG | + | chr7.3:6134337-6134356 | MS.gene22964:intron | 20.0% |
!! | TTTGATATCTTCCATATATA+TGG | + | chr7.3:6136651-6136670 | MS.gene22964:intron | 20.0% |
!!! | AATTTTCTGCTTTTAGTTTA+TGG | + | chr7.3:6136014-6136033 | MS.gene22964:intron | 20.0% |
!!! | ATAATTGATTTTGTCATGTT+AGG | + | chr7.3:6137959-6137978 | MS.gene22964:intron | 20.0% |
!!! | ATATATCTTTTGCAAATGTT+TGG | + | chr7.3:6135940-6135959 | MS.gene22964:intron | 20.0% |
!!! | ATGATTTTATTGGAAAAAAG+AGG | + | chr7.3:6133575-6133594 | MS.gene22964:CDS | 20.0% |
!!! | CTACAATTCAATAATTTGTA+AGG | - | chr7.3:6134725-6134744 | None:intergenic | 20.0% |
!!! | GGTTTCTTAAATATTTTCTT+TGG | + | chr7.3:6135961-6135980 | MS.gene22964:intron | 20.0% |
!!! | GTTATTTTCCAATCATAAAA+GGG | - | chr7.3:6134626-6134645 | None:intergenic | 20.0% |
!!! | TAATAGAATACGATTCTTTT+AGG | + | chr7.3:6134954-6134973 | MS.gene22964:intron | 20.0% |
!!! | TGAATAATTTCCTATTTTCT+TGG | + | chr7.3:6136418-6136437 | MS.gene22964:intron | 20.0% |
!!! | TTGTTTTACTTAATGGTAAT+GGG | + | chr7.3:6136454-6136473 | MS.gene22964:intron | 20.0% |
!!! | TTTGTTTTACTTAATGGTAA+TGG | + | chr7.3:6136453-6136472 | MS.gene22964:intron | 20.0% |
!!! | TTTTTTCTTCTTTATTACCA+GGG | + | chr7.3:6137490-6137509 | MS.gene22964:intron | 20.0% |
!!! | TTTTTTTCTTCTTTATTACC+AGG | + | chr7.3:6137489-6137508 | MS.gene22964:intron | 20.0% |
! | AAATATATTCTTGTATGTGC+AGG | + | chr7.3:6138655-6138674 | MS.gene22964:intron | 25.0% |
! | AACTAAATTTGAGAGGAATA+TGG | + | chr7.3:6134228-6134247 | MS.gene22964:CDS | 25.0% |
! | AGAACAATAAAAATACTGAG+AGG | - | chr7.3:6134773-6134792 | None:intergenic | 25.0% |
! | AGAAGTCTTCAAAGTTTAAT+AGG | + | chr7.3:6136743-6136762 | MS.gene22964:CDS | 25.0% |
! | AGTTCATCATGACAAAATTA+TGG | + | chr7.3:6134258-6134277 | MS.gene22964:CDS | 25.0% |
! | ATACATATATATACCATCAG+AGG | - | chr7.3:6135798-6135817 | None:intergenic | 25.0% |
! | ATATGTTATTACATTGATGG+CGG | - | chr7.3:6134924-6134943 | None:intergenic | 25.0% |
! | CGAAATGAACAATGAAATTA+AGG | - | chr7.3:6133484-6133503 | None:intergenic | 25.0% |
! | CTCTTAATTGGATATACTTA+CGG | + | chr7.3:6138539-6138558 | MS.gene22964:intron | 25.0% |
! | GCTACAAAAGAAAAAAATAC+AGG | - | chr7.3:6138627-6138646 | None:intergenic | 25.0% |
! | GGGTAACTAATATTTATTTC+AGG | - | chr7.3:6135773-6135792 | None:intergenic | 25.0% |
! | GTTAAAGAAAGTTAGATTGA+AGG | + | chr7.3:6135228-6135247 | MS.gene22964:CDS | 25.0% |
! | TATAAAACCGATAGAATTTG+AGG | + | chr7.3:6138700-6138719 | MS.gene22964:CDS | 25.0% |
! | TATGTAGTAAAGCTCTTAAT+TGG | + | chr7.3:6138527-6138546 | MS.gene22964:intron | 25.0% |
! | TCTTAATTGGATATACTTAC+GGG | + | chr7.3:6138540-6138559 | MS.gene22964:intron | 25.0% |
! | TGACTTTAAATACAAGGTTT+AGG | + | chr7.3:6137260-6137279 | MS.gene22964:intron | 25.0% |
! | TTAAGAGCTTTACTACATAA+AGG | - | chr7.3:6138526-6138545 | None:intergenic | 25.0% |
! | TTATGATTGGAAAATAACCT+TGG | + | chr7.3:6134628-6134647 | MS.gene22964:intron | 25.0% |
! | TTTATGCATTTCTTGAAACT+TGG | + | chr7.3:6136487-6136506 | MS.gene22964:intron | 25.0% |
!! | ATTGCTATCTTTACCTTTTA+TGG | + | chr7.3:6135713-6135732 | MS.gene22964:CDS | 25.0% |
!! | GGATTTGTTTGATAAATTAC+TGG | + | chr7.3:6134549-6134568 | MS.gene22964:intron | 25.0% |
!! | TTTATTCTTTTGGATATGAC+AGG | + | chr7.3:6138254-6138273 | MS.gene22964:intron | 25.0% |
!! | TTTGATAAATTACTGGTTGT+TGG | + | chr7.3:6134556-6134575 | MS.gene22964:intron | 25.0% |
!!! | ATCTCTTTTTTCAAAGATGA+AGG | - | chr7.3:6133290-6133309 | None:intergenic | 25.0% |
!!! | ATCTTTTATTTTGGTCAACA+CGG | - | chr7.3:6137801-6137820 | None:intergenic | 25.0% |
!!! | CAATTTGTTGATTTCTTAAC+CGG | - | chr7.3:6133997-6134016 | None:intergenic | 25.0% |
!!! | CAGATGTTTGTTTTACTTAA+TGG | + | chr7.3:6136447-6136466 | MS.gene22964:intron | 25.0% |
!!! | CGGTTTTGATTTTATTCTTT+TGG | + | chr7.3:6138244-6138263 | MS.gene22964:intron | 25.0% |
!!! | GGTTATTTTCCAATCATAAA+AGG | - | chr7.3:6134627-6134646 | None:intergenic | 25.0% |
!!! | GTATTGTCGATCTTTTATTT+TGG | - | chr7.3:6137810-6137829 | None:intergenic | 25.0% |
!!! | TGTAGAAGATGATTTTGAAA+AGG | + | chr7.3:6137014-6137033 | MS.gene22964:CDS | 25.0% |
!!! | TGTTTTGAAAAACTTACTTC+AGG | - | chr7.3:6138405-6138424 | None:intergenic | 25.0% |
!!! | TTTTCATCAAAGTACTTAGT+AGG | - | chr7.3:6134154-6134173 | None:intergenic | 25.0% |
AAAGGATAAAATGTTTGCCA+AGG | - | chr7.3:6138431-6138450 | None:intergenic | 30.0% | |
AAGAAGTTGAATAGAACCAA+AGG | + | chr7.3:6138773-6138792 | MS.gene22964:CDS | 30.0% | |
AATAAAAATACTGAGAGGAG+GGG | - | chr7.3:6134768-6134787 | None:intergenic | 30.0% | |
AATACATGTCCTATTGATAC+TGG | + | chr7.3:6135888-6135907 | MS.gene22964:intron | 30.0% | |
AATTACCATCTGACAATTTC+AGG | - | chr7.3:6135998-6136017 | None:intergenic | 30.0% | |
ACAATAAAAATACTGAGAGG+AGG | - | chr7.3:6134770-6134789 | None:intergenic | 30.0% | |
ACTGATATACAGCAAAAGAA+AGG | + | chr7.3:6137111-6137130 | MS.gene22964:CDS | 30.0% | |
AGATGTTTACATCAACTCAA+AGG | - | chr7.3:6137641-6137660 | None:intergenic | 30.0% | |
AGGATGTTACAAAGAATTAC+CGG | + | chr7.3:6133652-6133671 | MS.gene22964:CDS | 30.0% | |
ATAAACAGTACAGAAGACAA+TGG | - | chr7.3:6138198-6138217 | None:intergenic | 30.0% | |
ATATAAGCCATAGTCTTTGT+GGG | - | chr7.3:6135831-6135850 | None:intergenic | 30.0% | |
ATATATATACCATCAGAGGT+TGG | - | chr7.3:6135794-6135813 | None:intergenic | 30.0% | |
ATATATGCCTTCATCATAGT+TGG | - | chr7.3:6135926-6135945 | None:intergenic | 30.0% | |
ATCAACATTGAAGACTATGT+CGG | + | chr7.3:6137311-6137330 | MS.gene22964:intron | 30.0% | |
ATGAGATTGTAAAAAATCCC+GGG | + | chr7.3:6136523-6136542 | MS.gene22964:CDS | 30.0% | |
ATGCGTTCCTAAAATAAGTT+GGG | - | chr7.3:6135399-6135418 | None:intergenic | 30.0% | |
ATTATCAGCACCAATTGTTT+GGG | - | chr7.3:6136226-6136245 | None:intergenic | 30.0% | |
ATTCTATGATCCTCTACTAT+CGG | - | chr7.3:6134381-6134400 | None:intergenic | 30.0% | |
CAATAAAAATACTGAGAGGA+GGG | - | chr7.3:6134769-6134788 | None:intergenic | 30.0% | |
CATAAAAAAGTCGAAGTTGA+AGG | + | chr7.3:6138811-6138830 | MS.gene22964:CDS | 30.0% | |
CCAACAAAATGCCATATATA+TGG | - | chr7.3:6136665-6136684 | None:intergenic | 30.0% | |
CTGAATCCATTTGTTTGTTT+AGG | + | chr7.3:6133516-6133535 | MS.gene22964:intron | 30.0% | |
CTTCATATTCTTGTACAGTA+AGG | - | chr7.3:6136113-6136132 | None:intergenic | 30.0% | |
GATGAGATTGTAAAAAATCC+CGG | + | chr7.3:6136522-6136541 | MS.gene22964:CDS | 30.0% | |
GGTTAGTGACTTTAAATACA+AGG | + | chr7.3:6137254-6137273 | MS.gene22964:intron | 30.0% | |
GTGAACATTACAAAGATTTG+TGG | + | chr7.3:6137370-6137389 | MS.gene22964:intron | 30.0% | |
TACTTTGCGTTTAGCATTTA+TGG | + | chr7.3:6134498-6134517 | MS.gene22964:intron | 30.0% | |
TATATAAGCCATAGTCTTTG+TGG | - | chr7.3:6135832-6135851 | None:intergenic | 30.0% | |
TATATATACCATCAGAGGTT+GGG | - | chr7.3:6135793-6135812 | None:intergenic | 30.0% | |
TATTATCAGCACCAATTGTT+TGG | - | chr7.3:6136227-6136246 | None:intergenic | 30.0% | |
TATTATCATTGACAGAGACA+GGG | - | chr7.3:6133421-6133440 | None:intergenic | 30.0% | |
TCTCATCCTAAACAAACAAA+TGG | - | chr7.3:6133525-6133544 | None:intergenic | 30.0% | |
TGCTTGATAGGTTTCTATAA+AGG | + | chr7.3:6135096-6135115 | MS.gene22964:intron | 30.0% | |
TTATACATCAATCATGGACT+CGG | - | chr7.3:6134442-6134461 | None:intergenic | 30.0% | |
TTATTATCATTGACAGAGAC+AGG | - | chr7.3:6133422-6133441 | None:intergenic | 30.0% | |
TTCACTTCCTCAAATTCTAT+CGG | - | chr7.3:6138710-6138729 | None:intergenic | 30.0% | |
TTCTTTCTAGATTCTTCTTC+AGG | - | chr7.3:6133386-6133405 | None:intergenic | 30.0% | |
TTGATGAAAAGACAGATCTA+GGG | + | chr7.3:6134164-6134183 | MS.gene22964:CDS | 30.0% | |
TTTGATGAAAAGACAGATCT+AGG | + | chr7.3:6134163-6134182 | MS.gene22964:CDS | 30.0% | |
! | AAAATCTTGTTTGCCTTATC+CGG | - | chr7.3:6135630-6135649 | None:intergenic | 30.0% |
! | AAGACATCTTTGGAAGTATA+AGG | - | chr7.3:6138312-6138331 | None:intergenic | 30.0% |
! | AAGCCTATTTGAAATCAGTT+TGG | - | chr7.3:6137732-6137751 | None:intergenic | 30.0% |
! | AGTCCAAACTGATTTCAAAT+AGG | + | chr7.3:6137726-6137745 | MS.gene22964:intron | 30.0% |
! | ATAATTCGGAAGCATATGAA+AGG | - | chr7.3:6137287-6137306 | None:intergenic | 30.0% |
! | ATTCCTCTCAAATTTAGTTC+TGG | - | chr7.3:6134227-6134246 | None:intergenic | 30.0% |
! | CCATATATATGGCATTTTGT+TGG | + | chr7.3:6136662-6136681 | MS.gene22964:intron | 30.0% |
! | GAAACTTCGTATGTAGTTTT+TGG | - | chr7.3:6136549-6136568 | None:intergenic | 30.0% |
! | GAAGTCAAAATTGATTCTAG+AGG | + | chr7.3:6137933-6137952 | MS.gene22964:intron | 30.0% |
! | TAACAGACGATGATATGTTT+TGG | - | chr7.3:6135212-6135231 | None:intergenic | 30.0% |
! | TCTTTGAAAATGTTCAGTCA+CGG | - | chr7.3:6135508-6135527 | None:intergenic | 30.0% |
! | TCTTTGGAAGTATAAGGAAA+AGG | - | chr7.3:6138306-6138325 | None:intergenic | 30.0% |
! | TGCGTCTCAAAATCTAATTT+TGG | - | chr7.3:6137703-6137722 | None:intergenic | 30.0% |
! | TGGACTGATTTACTGATAAT+GGG | + | chr7.3:6136682-6136701 | MS.gene22964:intron | 30.0% |
! | TGTTGTTTATGATGCTTGAT+AGG | + | chr7.3:6135084-6135103 | MS.gene22964:intron | 30.0% |
! | TTGGACTGATTTACTGATAA+TGG | + | chr7.3:6136681-6136700 | MS.gene22964:intron | 30.0% |
! | TTTGGGTTATACATCAATCA+TGG | - | chr7.3:6134448-6134467 | None:intergenic | 30.0% |
! | TTTTACATTACCGATAGTAG+AGG | + | chr7.3:6134368-6134387 | MS.gene22964:intron | 30.0% |
!! | AACAATTGGTGCTGATAATA+AGG | + | chr7.3:6136227-6136246 | MS.gene22964:CDS | 30.0% |
!! | AGCTCTGAAAAAGATCAATT+GGG | + | chr7.3:6136868-6136887 | MS.gene22964:CDS | 30.0% |
!! | AGTTTTTCAAAACAGTTCCT+TGG | + | chr7.3:6138411-6138430 | MS.gene22964:intron | 30.0% |
!! | ATCGGTTTTATAATAACACC+TGG | - | chr7.3:6138692-6138711 | None:intergenic | 30.0% |
!! | TGATTTTGAAAAGGATAAGC+AGG | + | chr7.3:6137023-6137042 | MS.gene22964:CDS | 30.0% |
!! | TTCCTCTCAAATTTAGTTCT+GGG | - | chr7.3:6134226-6134245 | None:intergenic | 30.0% |
!! | TTTCAAGTTAGAATCAGCTA+TGG | - | chr7.3:6138013-6138032 | None:intergenic | 30.0% |
!!! | CAGTTGGTGCTATTAATTTT+TGG | - | chr7.3:6135005-6135024 | None:intergenic | 30.0% |
!!! | CTTCAACTTCGACTTTTTTA+TGG | - | chr7.3:6138813-6138832 | None:intergenic | 30.0% |
!!! | CTTCTTAGACTTCTTTTTTC+CGG | - | chr7.3:6133228-6133247 | None:intergenic | 30.0% |
!!! | GAATTTTTTTACTACTGCCA+TGG | + | chr7.3:6134834-6134853 | MS.gene22964:intron | 30.0% |
!!! | TCGCAAAGAATCTGTTTTTA+AGG | + | chr7.3:6136395-6136414 | MS.gene22964:CDS | 30.0% |
AAAAGAAAGGTTTACCATCC+TGG | + | chr7.3:6137124-6137143 | MS.gene22964:CDS | 35.0% | |
AACCAACCATGTAGAAAGAT+TGG | + | chr7.3:6134800-6134819 | MS.gene22964:intron | 35.0% | |
AACCCAGAACTAAATTTGAG+AGG | + | chr7.3:6134221-6134240 | MS.gene22964:CDS | 35.0% | |
AACCCCTTATTCAGAGAAAT+AGG | + | chr7.3:6134122-6134141 | MS.gene22964:CDS | 35.0% | |
AAGATGATGAGAGACATGAA+AGG | + | chr7.3:6133632-6133651 | MS.gene22964:CDS | 35.0% | |
ACCCCTTATTCAGAGAAATA+GGG | + | chr7.3:6134123-6134142 | MS.gene22964:CDS | 35.0% | |
ACTCTGATGAAAGACATCTT+TGG | - | chr7.3:6138322-6138341 | None:intergenic | 35.0% | |
AGAAATTTGAACAGTGCAGT+TGG | - | chr7.3:6135021-6135040 | None:intergenic | 35.0% | |
AGAGCTTTACTACATAAAGG+AGG | - | chr7.3:6138523-6138542 | None:intergenic | 35.0% | |
ATAAAAATACTGAGAGGAGG+GGG | - | chr7.3:6134767-6134786 | None:intergenic | 35.0% | |
ATACCTCGAAATCAGAAGAA+AGG | - | chr7.3:6133448-6133467 | None:intergenic | 35.0% | |
ATATCCCACTTAAAACACCA+TGG | - | chr7.3:6134854-6134873 | None:intergenic | 35.0% | |
ATCCAATCTTTCTACATGGT+TGG | - | chr7.3:6134805-6134824 | None:intergenic | 35.0% | |
ATGAAAGTTCCCAGAGAAAA+AGG | + | chr7.3:6137160-6137179 | MS.gene22964:CDS | 35.0% | |
ATGGAAGCTCATAAAAACGA+TGG | + | chr7.3:6134277-6134296 | MS.gene22964:CDS | 35.0% | |
ATGTCCTATTGATACTGGAA+AGG | + | chr7.3:6135893-6135912 | MS.gene22964:intron | 35.0% | |
CAAAGAAACAAGTCACAAAG+TGG | + | chr7.3:6134098-6134117 | MS.gene22964:CDS | 35.0% | |
CAAAGTTTAATAGGCCTGTT+AGG | + | chr7.3:6136752-6136771 | MS.gene22964:CDS | 35.0% | |
CATGCGTTCCTAAAATAAGT+TGG | - | chr7.3:6135400-6135419 | None:intergenic | 35.0% | |
CGAGAAACTCCAAACAAAAA+CGG | + | chr7.3:6138278-6138297 | MS.gene22964:CDS | 35.0% | |
CTATAAAGGATGAGAAGGAT+GGG | + | chr7.3:6135110-6135129 | MS.gene22964:CDS | 35.0% | |
CTATACCACAACAAATCAGA+TGG | - | chr7.3:6136043-6136062 | None:intergenic | 35.0% | |
CTTTACTACATAAAGGAGGA+CGG | - | chr7.3:6138519-6138538 | None:intergenic | 35.0% | |
GACTAGAAAAAGGAAAACCA+TGG | + | chr7.3:6135539-6135558 | MS.gene22964:CDS | 35.0% | |
GAGGAAGAATGATGTTATTC+CGG | + | chr7.3:6133856-6133875 | MS.gene22964:CDS | 35.0% | |
GGTTTCTATAAAGGATGAGA+AGG | + | chr7.3:6135105-6135124 | MS.gene22964:intron | 35.0% | |
TAAAGCCTGAAATTGTCAGA+TGG | + | chr7.3:6135990-6136009 | MS.gene22964:intron | 35.0% | |
TAACTGAGGAGGAATTAAGA+TGG | + | chr7.3:6134657-6134676 | MS.gene22964:intron | 35.0% | |
TAGTCTTCTTGACATGAACA+AGG | + | chr7.3:6134303-6134322 | MS.gene22964:CDS | 35.0% | |
TATATTCTTGTATGTGCAGG+TGG | + | chr7.3:6138658-6138677 | MS.gene22964:intron | 35.0% | |
TATTATGCTCTAATGTTGGC+AGG | + | chr7.3:6137595-6137614 | MS.gene22964:intron | 35.0% | |
TCATATCGTAGGCAATAAGA+AGG | + | chr7.3:6133832-6133851 | MS.gene22964:intron | 35.0% | |
TCATCTCATGACGAAAAAGA+AGG | - | chr7.3:6135162-6135181 | None:intergenic | 35.0% | |
TCGATTTCATCAACATCAAC+AGG | - | chr7.3:6133332-6133351 | None:intergenic | 35.0% | |
TCTATAAAGGATGAGAAGGA+TGG | + | chr7.3:6135109-6135128 | MS.gene22964:CDS | 35.0% | |
TCTGAGAAGTCCAAGAAAAT+AGG | - | chr7.3:6136431-6136450 | None:intergenic | 35.0% | |
TGAAAAAGATCAATTGGGAG+AGG | + | chr7.3:6136873-6136892 | MS.gene22964:CDS | 35.0% | |
TGAAAGTTCCCAGAGAAAAA+GGG | + | chr7.3:6137161-6137180 | MS.gene22964:CDS | 35.0% | |
TGAGATGGAAGTTCATAAGA+TGG | - | chr7.3:6136958-6136977 | None:intergenic | 35.0% | |
TGATTGGAAAATAACCTTGG+CGG | + | chr7.3:6134631-6134650 | MS.gene22964:intron | 35.0% | |
TGCAATCCAATCTTTCTACA+TGG | - | chr7.3:6134809-6134828 | None:intergenic | 35.0% | |
TGTCCTATTGATACTGGAAA+GGG | + | chr7.3:6135894-6135913 | MS.gene22964:intron | 35.0% | |
TTATGAACTTCCATCTCAAG+AGG | + | chr7.3:6136960-6136979 | MS.gene22964:CDS | 35.0% | |
TTCTTGACATGAACAAGGTA+TGG | + | chr7.3:6134308-6134327 | MS.gene22964:intron | 35.0% | |
TTGGCATGAGTAATTGAGTA+TGG | - | chr7.3:6134986-6135005 | None:intergenic | 35.0% | |
! | AAACCTGATTGTCTTTTTCC+AGG | + | chr7.3:6134404-6134423 | MS.gene22964:intron | 35.0% |
! | ATTGACTCTGATGATGATTC+TGG | + | chr7.3:6133604-6133623 | MS.gene22964:CDS | 35.0% |
! | CTCCCTATTTCTCTGAATAA+GGG | - | chr7.3:6134128-6134147 | None:intergenic | 35.0% |
! | GACGACGGATATGATTTTAT+TGG | + | chr7.3:6133565-6133584 | MS.gene22964:CDS | 35.0% |
! | GGACTGATTTACTGATAATG+GGG | + | chr7.3:6136683-6136702 | MS.gene22964:intron | 35.0% |
! | GTTGTTCTCCCTTTTATGAT+TGG | + | chr7.3:6134615-6134634 | MS.gene22964:intron | 35.0% |
! | TACCTTTTTCCATGTATCTG+AGG | - | chr7.3:6136580-6136599 | None:intergenic | 35.0% |
! | TCCCTATTTCTCTGAATAAG+GGG | - | chr7.3:6134127-6134146 | None:intergenic | 35.0% |
! | TGAACATTTTCAAAGACACG+AGG | + | chr7.3:6135512-6135531 | MS.gene22964:CDS | 35.0% |
! | TTGACTCTGATGATGATTCT+GGG | + | chr7.3:6133605-6133624 | MS.gene22964:CDS | 35.0% |
! | TTGGATATACTTACGGGTTT+TGG | + | chr7.3:6138546-6138565 | MS.gene22964:intron | 35.0% |
! | TTTCTACATGGTTGGTTAAG+AGG | - | chr7.3:6134797-6134816 | None:intergenic | 35.0% |
!! | AATACTTCAGTGTTGGTCTA+CGG | + | chr7.3:6137825-6137844 | MS.gene22964:intron | 35.0% |
!! | AATTGGTGCTGATAATAAGG+TGG | + | chr7.3:6136230-6136249 | MS.gene22964:CDS | 35.0% |
!! | ATGGTGTTTTAAGTGGGATA+TGG | + | chr7.3:6134853-6134872 | MS.gene22964:intron | 35.0% |
!! | CGTTTTTGTTTGGAGTTTCT+CGG | - | chr7.3:6138280-6138299 | None:intergenic | 35.0% |
!! | CTCACTTCCCAACTTATTTT+AGG | + | chr7.3:6135389-6135408 | MS.gene22964:intron | 35.0% |
!! | GAGCTCTGAAAAAGATCAAT+TGG | + | chr7.3:6136867-6136886 | MS.gene22964:intron | 35.0% |
!! | GATCTAGGGTTTTCAACTAT+AGG | + | chr7.3:6134178-6134197 | MS.gene22964:CDS | 35.0% |
!! | TCTGATTTGTTGTGGTATAG+AGG | + | chr7.3:6136043-6136062 | MS.gene22964:intron | 35.0% |
!! | TCTTTTTCGTCATGAGATGA+AGG | + | chr7.3:6135162-6135181 | MS.gene22964:CDS | 35.0% |
!!! | AATTTTGACTTCTCCAGAAG+TGG | - | chr7.3:6137925-6137944 | None:intergenic | 35.0% |
!!! | ATATACTTACGGGTTTTGGA+GGG | + | chr7.3:6138550-6138569 | MS.gene22964:intron | 35.0% |
AAAGATAGCAATCCCGACTT+GGG | - | chr7.3:6135705-6135724 | None:intergenic | 40.0% | |
AAAGTCGAAGTTGAAGGTCA+AGG | + | chr7.3:6138817-6138836 | MS.gene22964:CDS | 40.0% | |
AACAGTACAGAAGACAATGG+TGG | - | chr7.3:6138195-6138214 | None:intergenic | 40.0% | |
AAGTCGAAGTTGAAGGTCAA+GGG | + | chr7.3:6138818-6138837 | MS.gene22964:CDS | 40.0% | |
AAGTGGCAACATTGAGAATG+AGG | + | chr7.3:6136308-6136327 | MS.gene22964:CDS | 40.0% | |
AAGTTTGGCAAAGATAACCC+TGG | - | chr7.3:6137510-6137529 | None:intergenic | 40.0% | |
ACCATATGTTGTTGCAGAGT+GGG | + | chr7.3:6137422-6137441 | MS.gene22964:intron | 40.0% | |
ACGAGGAACTGACTAGAAAA+AGG | + | chr7.3:6135529-6135548 | MS.gene22964:CDS | 40.0% | |
AGAAGACTTCCGACAATCAA+CGG | + | chr7.3:6133243-6133262 | MS.gene22964:CDS | 40.0% | |
AGAGTCTTCTCAGTTGGAAA+TGG | + | chr7.3:6135252-6135271 | MS.gene22964:CDS | 40.0% | |
AGATGATGAAATGCCCAAGT+CGG | + | chr7.3:6135689-6135708 | MS.gene22964:CDS | 40.0% | |
AGCATCCTTTCTCTTCTTGA+GGG | - | chr7.3:6137193-6137212 | None:intergenic | 40.0% | |
AGTGGCAACATTGAGAATGA+GGG | + | chr7.3:6136309-6136328 | MS.gene22964:CDS | 40.0% | |
ATAACCAGGCTGCTAAATTG+CGG | + | chr7.3:6135134-6135153 | MS.gene22964:CDS | 40.0% | |
ATCAGCAGCATTCTCATCAT+CGG | - | chr7.3:6135601-6135620 | None:intergenic | 40.0% | |
ATCCTGATCATTCAAGACTC+CGG | + | chr7.3:6133975-6133994 | MS.gene22964:CDS | 40.0% | |
ATGGCTAAAGCCCAAACAAT+TGG | + | chr7.3:6136213-6136232 | MS.gene22964:CDS | 40.0% | |
ATTAGTTACCCAACCTCTGA+TGG | + | chr7.3:6135782-6135801 | MS.gene22964:intron | 40.0% | |
CAAGTTAGAATCAGCTATGG+AGG | - | chr7.3:6138010-6138029 | None:intergenic | 40.0% | |
CAGGAGTAGGGTTTAAATGT+TGG | - | chr7.3:6133313-6133332 | None:intergenic | 40.0% | |
CATCAACATCAACAGGAGTA+GGG | - | chr7.3:6133325-6133344 | None:intergenic | 40.0% | |
CCATATTTGCCTCAGATACA+TGG | + | chr7.3:6136568-6136587 | MS.gene22964:CDS | 40.0% | |
CCTTATTCAGAGAAATAGGG+AGG | + | chr7.3:6134126-6134145 | MS.gene22964:CDS | 40.0% | |
CTACATTTGGACCTCTTACT+CGG | + | chr7.3:6138379-6138398 | MS.gene22964:CDS | 40.0% | |
GAACCTGGAAAAAGACAATC+AGG | - | chr7.3:6134410-6134429 | None:intergenic | 40.0% | |
GAAGCTCATAAAAACGATGG+TGG | + | chr7.3:6134280-6134299 | MS.gene22964:CDS | 40.0% | |
GACAATCAACGGAAGAAAAC+CGG | + | chr7.3:6133254-6133273 | MS.gene22964:CDS | 40.0% | |
GACACAAACACAAAAGTCCA+TGG | + | chr7.3:6135427-6135446 | MS.gene22964:CDS | 40.0% | |
GACTATGTCGGAAATTGCAA+TGG | + | chr7.3:6137323-6137342 | MS.gene22964:intron | 40.0% | |
GAGAAGAAGCGAAATGAAAG+AGG | + | chr7.3:6133182-6133201 | MS.gene22964:CDS | 40.0% | |
GATAGCGATACAGATGATGA+AGG | + | chr7.3:6136895-6136914 | MS.gene22964:CDS | 40.0% | |
GATCGACAATACTTCAGTGT+TGG | + | chr7.3:6137818-6137837 | MS.gene22964:intron | 40.0% | |
GCATATTCATTAGCAGCTTC+AGG | - | chr7.3:6135280-6135299 | None:intergenic | 40.0% | |
GGGCAGGCAAAAAACAAAAA+TGG | + | chr7.3:6136703-6136722 | MS.gene22964:intron | 40.0% | |
GGTTTAGATAAGCAGGATGA+AGG | + | chr7.3:6135471-6135490 | MS.gene22964:CDS | 40.0% | |
GTGATCTCCAACTATGATGA+AGG | + | chr7.3:6135916-6135935 | MS.gene22964:intron | 40.0% | |
TAAAGATAGCAATCCCGACT+TGG | - | chr7.3:6135706-6135725 | None:intergenic | 40.0% | |
TAATCCTAGTCACGATGTTG+TGG | + | chr7.3:6133901-6133920 | MS.gene22964:CDS | 40.0% | |
TACAGATGATGAAGGACAGA+TGG | + | chr7.3:6136903-6136922 | MS.gene22964:CDS | 40.0% | |
TACCACAACAAATCAGATGG+AGG | - | chr7.3:6136040-6136059 | None:intergenic | 40.0% | |
TACCATATGTTGTTGCAGAG+TGG | + | chr7.3:6137421-6137440 | MS.gene22964:intron | 40.0% | |
TCACCCTTTCCAGTATCAAT+AGG | - | chr7.3:6135900-6135919 | None:intergenic | 40.0% | |
TCAGACTCTAGATATAGCTC+CGG | - | chr7.3:6133878-6133897 | None:intergenic | 40.0% | |
TCATCAACATCAACAGGAGT+AGG | - | chr7.3:6133326-6133345 | None:intergenic | 40.0% | |
TCTCAGTCAAGTTATTGTGC+CGG | + | chr7.3:6138224-6138243 | MS.gene22964:intron | 40.0% | |
TGAAGATTCCATGAAGAAGC+TGG | + | chr7.3:6136128-6136147 | MS.gene22964:CDS | 40.0% | |
TGACCTTTCTTCTGATTTCG+AGG | + | chr7.3:6133442-6133461 | MS.gene22964:CDS | 40.0% | |
TGCCTCAGATACATGGAAAA+AGG | + | chr7.3:6136575-6136594 | MS.gene22964:CDS | 40.0% | |
TTCAAAGATGAAGGCAAACG+AGG | - | chr7.3:6133281-6133300 | None:intergenic | 40.0% | |
TTCATGTTCTTTGACCATCC+AGG | - | chr7.3:6137145-6137164 | None:intergenic | 40.0% | |
! | ACAAAAGACACTAGAAGTGC+TGG | + | chr7.3:6135662-6135681 | MS.gene22964:CDS | 40.0% |
! | CCATGTATCTGAGGCAAATA+TGG | - | chr7.3:6136571-6136590 | None:intergenic | 40.0% |
! | CCTCCCTATTTCTCTGAATA+AGG | - | chr7.3:6134129-6134148 | None:intergenic | 40.0% |
! | CTCTGAGAAATCAAGCAAGA+AGG | + | chr7.3:6137233-6137252 | MS.gene22964:CDS | 40.0% |
! | CTGGCAAGTGGATTTATGAT+AGG | - | chr7.3:6138172-6138191 | None:intergenic | 40.0% |
! | TGACTCTGATGATGATTCTG+GGG | + | chr7.3:6133606-6133625 | MS.gene22964:CDS | 40.0% |
! | TGATGGACGAATTACTATCG+AGG | + | chr7.3:6133928-6133947 | MS.gene22964:CDS | 40.0% |
! | TGTCATGTTAGGTTGTTCTC+AGG | + | chr7.3:6137970-6137989 | MS.gene22964:intron | 40.0% |
! | TTACCATCAAAAGGCTTGCT+CGG | - | chr7.3:6133682-6133701 | None:intergenic | 40.0% |
! | TTACGATAACAGTGATAGCG+AGG | + | chr7.3:6136266-6136285 | MS.gene22964:CDS | 40.0% |
!! | ACTGCCATGGTGTTTTAAGT+GGG | + | chr7.3:6134847-6134866 | MS.gene22964:intron | 40.0% |
!! | GATATACTTACGGGTTTTGG+AGG | + | chr7.3:6138549-6138568 | MS.gene22964:intron | 40.0% |
!! | GGTTTTCTTCCGTTGATTGT+CGG | - | chr7.3:6133255-6133274 | None:intergenic | 40.0% |
!! | GTTATTACATTGATGGCGGA+TGG | - | chr7.3:6134920-6134939 | None:intergenic | 40.0% |
!! | TACTGCCATGGTGTTTTAAG+TGG | + | chr7.3:6134846-6134865 | MS.gene22964:intron | 40.0% |
!! | TGATTTACTGATAATGGGGC+AGG | + | chr7.3:6136687-6136706 | MS.gene22964:intron | 40.0% |
!! | TGGCAGAAGAGTATTTGGAA+TGG | + | chr7.3:6136194-6136213 | MS.gene22964:CDS | 40.0% |
!!! | CTCAATGTTGCCACTTTTCT+TGG | - | chr7.3:6136304-6136323 | None:intergenic | 40.0% |
!!! | GAAAAGGCACCGTTTTTGTT+TGG | - | chr7.3:6138290-6138309 | None:intergenic | 40.0% |
!!! | TAGACTTCTTTTTTCCGGTG+TGG | - | chr7.3:6133223-6133242 | None:intergenic | 40.0% |
!!! | TTCGTATGTAGTTTTTGGCC+CGG | - | chr7.3:6136544-6136563 | None:intergenic | 40.0% |
AACCGGAGTCTTGAATGATC+AGG | - | chr7.3:6133980-6133999 | None:intergenic | 45.0% | |
AAGAAGCTGGAGGATTCTGA+TGG | + | chr7.3:6136141-6136160 | MS.gene22964:CDS | 45.0% | |
AATCATGGACTCGGAATGCA+TGG | - | chr7.3:6134433-6134452 | None:intergenic | 45.0% | |
ACATATATACCTCAGCCCTC+TGG | - | chr7.3:6135318-6135337 | None:intergenic | 45.0% | |
ACCTTTACATCGTGCCTAAC+AGG | - | chr7.3:6136769-6136788 | None:intergenic | 45.0% | |
AGAAGCCCTCAAGAAGAGAA+AGG | + | chr7.3:6137185-6137204 | MS.gene22964:CDS | 45.0% | |
AGAATCCTCCAGCTTCTTCA+TGG | - | chr7.3:6136139-6136158 | None:intergenic | 45.0% | |
AGAGGTCCAAATGTAGTTGC+CGG | - | chr7.3:6138375-6138394 | None:intergenic | 45.0% | |
AGATGATGAAGGACAGATGG+TGG | + | chr7.3:6136906-6136925 | MS.gene22964:CDS | 45.0% | |
AGATTCCATGAAGAAGCTGG+AGG | + | chr7.3:6136131-6136150 | MS.gene22964:CDS | 45.0% | |
AGCCTCTATTACTTCCTGGT+TGG | + | chr7.3:6137079-6137098 | MS.gene22964:CDS | 45.0% | |
ATCATGGACTCGGAATGCAT+GGG | - | chr7.3:6134432-6134451 | None:intergenic | 45.0% | |
ATTCAGTTCCTCCAGCCAAA+TGG | - | chr7.3:6137858-6137877 | None:intergenic | 45.0% | |
CATCTCAAGAGGAGCTCATT+CGG | + | chr7.3:6136971-6136990 | MS.gene22964:CDS | 45.0% | |
CATGAAACAAGAACGCCAGA+GGG | + | chr7.3:6135300-6135319 | MS.gene22964:CDS | 45.0% | |
CATTGGACCTGAATCTAACC+CGG | + | chr7.3:6138353-6138372 | MS.gene22964:CDS | 45.0% | |
CCAAAAGTAGCATCTACCAG+TGG | + | chr7.3:6136174-6136193 | MS.gene22964:CDS | 45.0% | |
CCATAGTCTTTGTGGGCATT+AGG | - | chr7.3:6135824-6135843 | None:intergenic | 45.0% | |
CCTAATGCCCACAAAGACTA+TGG | + | chr7.3:6135821-6135840 | MS.gene22964:intron | 45.0% | |
CCTCTATTACTTCCTGGTTG+GGG | + | chr7.3:6137081-6137100 | MS.gene22964:CDS | 45.0% | |
CTTCAGCGTAAAATGCAACG+TGG | + | chr7.3:6135450-6135469 | MS.gene22964:CDS | 45.0% | |
GAAAGGTTTACCATCCTGGA+TGG | + | chr7.3:6137128-6137147 | MS.gene22964:CDS | 45.0% | |
GAGAAGCCTCTATTACTTCC+TGG | + | chr7.3:6137075-6137094 | MS.gene22964:CDS | 45.0% | |
GAGCATCCTTTCTCTTCTTG+AGG | - | chr7.3:6137194-6137213 | None:intergenic | 45.0% | |
GAGGGGGAGATTAAATAGAG+AGG | - | chr7.3:6134751-6134770 | None:intergenic | 45.0% | |
GATCGTCACGAAGAGGATTA+AGG | - | chr7.3:6133958-6133977 | None:intergenic | 45.0% | |
GATGATGAAATGCCCAAGTC+GGG | + | chr7.3:6135690-6135709 | MS.gene22964:CDS | 45.0% | |
GCAACGTGGTTTAGATAAGC+AGG | + | chr7.3:6135464-6135483 | MS.gene22964:CDS | 45.0% | |
GCCTCTATTACTTCCTGGTT+GGG | + | chr7.3:6137080-6137099 | MS.gene22964:CDS | 45.0% | |
GGAAGTAATAGAGGCTTCTC+AGG | - | chr7.3:6137075-6137094 | None:intergenic | 45.0% | |
GGGTTAGATTCAGGTCCAAT+GGG | - | chr7.3:6138354-6138373 | None:intergenic | 45.0% | |
TAATAGAGGCTTCTCAGGCT+CGG | - | chr7.3:6137070-6137089 | None:intergenic | 45.0% | |
TCCAAATACTCTTCTGCCAC+TGG | - | chr7.3:6136193-6136212 | None:intergenic | 45.0% | |
TCCCACTCTGCAACAACATA+TGG | - | chr7.3:6137426-6137445 | None:intergenic | 45.0% | |
TCTAACCCGGCAACTACATT+TGG | + | chr7.3:6138366-6138385 | MS.gene22964:CDS | 45.0% | |
TGTATGTTCGGTTCCACTTC+TGG | + | chr7.3:6137909-6137928 | MS.gene22964:intron | 45.0% | |
TGTTCATGCACCACTTCCAA+AGG | + | chr7.3:6134033-6134052 | MS.gene22964:CDS | 45.0% | |
TGTTCTTTGACCATCCAGGA+TGG | - | chr7.3:6137141-6137160 | None:intergenic | 45.0% | |
! | CAATCTGATGATGACGACGA+CGG | + | chr7.3:6133550-6133569 | MS.gene22964:CDS | 45.0% |
! | GCTCGGGATTTTCTTCATTG+AGG | - | chr7.3:6137053-6137072 | None:intergenic | 45.0% |
! | GGCTTCTTCCCTTTTTCTCT+GGG | - | chr7.3:6137172-6137191 | None:intergenic | 45.0% |
! | GGCTTTGCTATCATTGCCTT+TGG | - | chr7.3:6138792-6138811 | None:intergenic | 45.0% |
! | TCATTCGGCAAGCTTTTGCT+GGG | + | chr7.3:6136986-6137005 | MS.gene22964:CDS | 45.0% |
! | TGATAGCGAGGATGACTTTG+AGG | + | chr7.3:6136278-6136297 | MS.gene22964:CDS | 45.0% |
! | TGCATTTTACGCTGAAGCCA+TGG | - | chr7.3:6135447-6135466 | None:intergenic | 45.0% |
! | TTTGTTGTGGTATAGAGGCG+TGG | + | chr7.3:6136048-6136067 | MS.gene22964:intron | 45.0% |
!! | AAAGACACTAGAAGTGCTGG+AGG | + | chr7.3:6135665-6135684 | MS.gene22964:CDS | 45.0% |
!! | ACCAGTGGCAGAAGAGTATT+TGG | + | chr7.3:6136189-6136208 | MS.gene22964:CDS | 45.0% |
!! | ATTACATTGATGGCGGATGG+AGG | - | chr7.3:6134917-6134936 | None:intergenic | 45.0% |
!! | GAATGCTGCTGATTCTGATC+CGG | + | chr7.3:6135608-6135627 | MS.gene22964:CDS | 45.0% |
!! | GACTTTGAGGCCAAGAAAAG+TGG | + | chr7.3:6136291-6136310 | MS.gene22964:CDS | 45.0% |
!! | TGCTGATTCTGATCCGGATA+AGG | + | chr7.3:6135614-6135633 | MS.gene22964:CDS | 45.0% |
!!! | ACTTCTTTTTTCCGGTGTGG+CGG | - | chr7.3:6133220-6133239 | None:intergenic | 45.0% |
!!! | CCACTGGTAGATGCTACTTT+TGG | - | chr7.3:6136177-6136196 | None:intergenic | 45.0% |
!!! | TCGTATGTAGTTTTTGGCCC+GGG | - | chr7.3:6136543-6136562 | None:intergenic | 45.0% |
!!! | TTAATTTTTTTTTACTTTTT+CGG | + | chr7.3:6134688-6134707 | MS.gene22964:intron | 5.0% |
AAAGGCAGATCAAGCGAAGG+TGG | + | chr7.3:6134051-6134070 | MS.gene22964:CDS | 50.0% | |
AATAGAGGCTTCTCAGGCTC+GGG | - | chr7.3:6137069-6137088 | None:intergenic | 50.0% | |
ACCTTCGCTTGATCTGCCTT+TGG | - | chr7.3:6134052-6134071 | None:intergenic | 50.0% | |
AGATGAAGGCAAACGAGGAC+CGG | - | chr7.3:6133276-6133295 | None:intergenic | 50.0% | |
ATCACTGCTGCTACTGTCCA+TGG | - | chr7.3:6135559-6135578 | None:intergenic | 50.0% | |
CACGATGTTGTGGAAGGTGA+TGG | + | chr7.3:6133911-6133930 | MS.gene22964:CDS | 50.0% | |
CAGAGTATGCGTATGCCCAT+TGG | + | chr7.3:6138336-6138355 | MS.gene22964:CDS | 50.0% | |
CAGATCAAGCGAAGGTGGAA+AGG | + | chr7.3:6134056-6134075 | MS.gene22964:CDS | 50.0% | |
CCATGAAACAAGAACGCCAG+AGG | + | chr7.3:6135299-6135318 | MS.gene22964:CDS | 50.0% | |
CCCCAACCAGGAAGTAATAG+AGG | - | chr7.3:6137084-6137103 | None:intergenic | 50.0% | |
CCTAGTCACGATGTTGTGGA+AGG | + | chr7.3:6133905-6133924 | MS.gene22964:CDS | 50.0% | |
CCTTCCACAACATCGTGACT+AGG | - | chr7.3:6133908-6133927 | None:intergenic | 50.0% | |
CGAATGAGCTCCTCTTGAGA+TGG | - | chr7.3:6136973-6136992 | None:intergenic | 50.0% | |
CGTCACGAAGAGGATTAAGG+AGG | - | chr7.3:6133955-6133974 | None:intergenic | 50.0% | |
CTCACGATAAACCAGAGCAG+CGG | + | chr7.3:6138732-6138751 | MS.gene22964:CDS | 50.0% | |
CTTACTTCAGGCCGAGTAAG+AGG | - | chr7.3:6138393-6138412 | None:intergenic | 50.0% | |
GAAGGCAGAGTCTTCTCAGT+TGG | + | chr7.3:6135246-6135265 | MS.gene22964:CDS | 50.0% | |
GAGGTCCAAATGTAGTTGCC+GGG | - | chr7.3:6138374-6138393 | None:intergenic | 50.0% | |
GCCTGTTAGGCACGATGTAA+AGG | + | chr7.3:6136765-6136784 | MS.gene22964:CDS | 50.0% | |
GGGAAGTGATCATCTGCAGA+AGG | + | chr7.3:6136329-6136348 | MS.gene22964:CDS | 50.0% | |
GTACAGAAGACAATGGTGGC+TGG | - | chr7.3:6138191-6138210 | None:intergenic | 50.0% | |
TACTTCCTGGTTGGGGTCAA+TGG | + | chr7.3:6137088-6137107 | MS.gene22964:CDS | 50.0% | |
TCAAGCGAAGGTGGAAAGGA+AGG | + | chr7.3:6134060-6134079 | MS.gene22964:CDS | 50.0% | |
TCCAAAGGCAGATCAAGCGA+AGG | + | chr7.3:6134048-6134067 | MS.gene22964:CDS | 50.0% | |
TCGTAGGCAATAAGAAGGCG+AGG | + | chr7.3:6133837-6133856 | MS.gene22964:intron | 50.0% | |
TCTGCAGCAACAACAGCTAG+TGG | - | chr7.3:6133766-6133785 | None:intergenic | 50.0% | |
TGAGAAGGATGGGCATAACC+AGG | + | chr7.3:6135120-6135139 | MS.gene22964:CDS | 50.0% | |
TGATCAGGATCGTCACGAAG+AGG | - | chr7.3:6133965-6133984 | None:intergenic | 50.0% | |
! | AAAAGGCTTGCTCGGCATAC+CGG | - | chr7.3:6133674-6133693 | None:intergenic | 50.0% |
! | AACCTTGGCGGACATAACTG+AGG | + | chr7.3:6134643-6134662 | MS.gene22964:intron | 50.0% |
! | ATGCCGAGCAAGCCTTTTGA+TGG | + | chr7.3:6133676-6133695 | MS.gene22964:CDS | 50.0% |
! | CATTCGGCAAGCTTTTGCTG+GGG | + | chr7.3:6136987-6137006 | MS.gene22964:CDS | 50.0% |
! | CCTCTGGCGTTCTTGTTTCA+TGG | - | chr7.3:6135302-6135321 | None:intergenic | 50.0% |
! | CGGGTTAGATTCAGGTCCAA+TGG | - | chr7.3:6138355-6138374 | None:intergenic | 50.0% |
! | CTCATTCGGCAAGCTTTTGC+TGG | + | chr7.3:6136985-6137004 | MS.gene22964:CDS | 50.0% |
! | CTCTGATGATGATTCTGGGG+AGG | + | chr7.3:6133609-6133628 | MS.gene22964:CDS | 50.0% |
! | GCTTGATCTGCCTTTGGAAG+TGG | - | chr7.3:6134046-6134065 | None:intergenic | 50.0% |
! | GGGCTTCTTCCCTTTTTCTC+TGG | - | chr7.3:6137173-6137192 | None:intergenic | 50.0% |
! | GTAGTTGCCGGGTTAGATTC+AGG | - | chr7.3:6138363-6138382 | None:intergenic | 50.0% |
! | TGTGGTATAGAGGCGTGGAT+TGG | + | chr7.3:6136053-6136072 | MS.gene22964:intron | 50.0% |
!! | GATGAAGGACAGATGGTGGA+TGG | + | chr7.3:6136910-6136929 | MS.gene22964:CDS | 50.0% |
!! | GGCCTCCATCTGATTTGTTG+TGG | + | chr7.3:6136035-6136054 | MS.gene22964:intron | 50.0% |
ACTCGGAATGCATGGGAACC+TGG | - | chr7.3:6134425-6134444 | None:intergenic | 55.0% | |
AGACAATGGTGGCTGGCAAG+TGG | - | chr7.3:6138184-6138203 | None:intergenic | 55.0% | |
AGCGAAGGTGGAAAGGAAGG+TGG | + | chr7.3:6134063-6134082 | MS.gene22964:CDS | 55.0% | |
CTCCTCAGTTATGTCCGCCA+AGG | - | chr7.3:6134648-6134667 | None:intergenic | 55.0% | |
GTCTACGGCTCTACGCCATT+TGG | + | chr7.3:6137840-6137859 | MS.gene22964:intron | 55.0% | |
GTGCAGGTGGTGAAGAAACC+AGG | + | chr7.3:6138671-6138690 | MS.gene22964:intron | 55.0% | |
TCAGTCCATTGACCCCAACC+AGG | - | chr7.3:6137096-6137115 | None:intergenic | 55.0% | |
! | CGCTGCTCTGGTTTATCGTG+AGG | - | chr7.3:6138734-6138753 | None:intergenic | 55.0% |
! | CTTGGCGGACATAACTGAGG+AGG | + | chr7.3:6134646-6134665 | MS.gene22964:intron | 55.0% |
! | TGGCGGATGGAGGACAATAG+CGG | - | chr7.3:6134907-6134926 | None:intergenic | 55.0% |
! | TTTTCCGGTGTGGCGGTTGT+TGG | - | chr7.3:6133213-6133232 | None:intergenic | 55.0% |
ACAAGAACGCCAGAGGGCTG+AGG | + | chr7.3:6135306-6135325 | MS.gene22964:CDS | 60.0% | |
ACACTCTGTTGCCGCTGCTC+TGG | - | chr7.3:6138746-6138765 | None:intergenic | 60.0% | |
ACGGCTCTACGCCATTTGGC+TGG | + | chr7.3:6137844-6137863 | MS.gene22964:intron | 60.0% | |
GCTCTACGCCATTTGGCTGG+AGG | + | chr7.3:6137847-6137866 | MS.gene22964:intron | 60.0% | |
GGCTCCGCAATTTAGCAGCC+TGG | - | chr7.3:6135141-6135160 | None:intergenic | 60.0% | |
GACGCCAACAACCGCCACAC+CGG | + | chr7.3:6133206-6133225 | MS.gene22964:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 6133176 | 6138850 | 6133176 | ID=MS.gene22964 |
chr7.3 | mRNA | 6133176 | 6138850 | 6133176 | ID=MS.gene22964.t1;Parent=MS.gene22964 |
chr7.3 | exon | 6133176 | 6133463 | 6133176 | ID=MS.gene22964.t1.exon1;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6133176 | 6133463 | 6133176 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6133538 | 6133697 | 6133538 | ID=MS.gene22964.t1.exon2;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6133538 | 6133697 | 6133538 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6133843 | 6134324 | 6133843 | ID=MS.gene22964.t1.exon3;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6133843 | 6134324 | 6133843 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6135106 | 6135327 | 6135106 | ID=MS.gene22964.t1.exon4;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6135106 | 6135327 | 6135106 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6135411 | 6135734 | 6135411 | ID=MS.gene22964.t1.exon5;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6135411 | 6135734 | 6135411 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6136063 | 6136416 | 6136063 | ID=MS.gene22964.t1.exon6;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6136063 | 6136416 | 6136063 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6136516 | 6136596 | 6136516 | ID=MS.gene22964.t1.exon7;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6136516 | 6136596 | 6136516 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6136709 | 6136786 | 6136709 | ID=MS.gene22964.t1.exon8;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6136709 | 6136786 | 6136709 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6136868 | 6137254 | 6136868 | ID=MS.gene22964.t1.exon9;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6136868 | 6137254 | 6136868 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6138276 | 6138407 | 6138276 | ID=MS.gene22964.t1.exon10;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6138276 | 6138407 | 6138276 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
chr7.3 | exon | 6138677 | 6138850 | 6138677 | ID=MS.gene22964.t1.exon11;Parent=MS.gene22964.t1 |
chr7.3 | CDS | 6138677 | 6138850 | 6138677 | ID=cds.MS.gene22964.t1;Parent=MS.gene22964.t1 |
Gene Sequence |
Protein sequence |