Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98786.t1 | XP_003623222.2 | 74.3 | 498 | 10 | 1 | 1 | 380 | 1 | 498 | 3.90E-195 | 690.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98786.t1 | O80437 | 58.7 | 492 | 81 | 3 | 9 | 379 | 10 | 500 | 1.2e-152 | 540.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98786.t1 | G7L6J6 | 74.3 | 498 | 10 | 1 | 1 | 380 | 1 | 498 | 2.8e-195 | 690.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene98786 | 0.806466 | 8.12E-50 | -1.69E-46 |
| MS.gene049236 | MS.gene98786 | -0.809525 | 1.81E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene98786 | 0.829123 | 6.14E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene98786 | 0.855356 | 6.67E-62 | -1.69E-46 |
| MS.gene049356 | MS.gene98786 | 0.802934 | 4.43E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene98786 | 0.836454 | 9.27E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene98786 | 0.844857 | 5.83E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene98786 | 0.834606 | 2.72E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene98786 | 0.859318 | 4.49E-63 | -1.69E-46 |
| MS.gene049758 | MS.gene98786 | 0.849354 | 3.41E-60 | -1.69E-46 |
| MS.gene049910 | MS.gene98786 | 0.813489 | 2.49E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene98786 | 0.827634 | 1.40E-54 | -1.69E-46 |
| MS.gene050099 | MS.gene98786 | 0.80889 | 2.48E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene98786 | 0.829563 | 4.80E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene98786 | 0.864512 | 1.15E-64 | -1.69E-46 |
| MS.gene050397 | MS.gene98786 | 0.877376 | 6.61E-69 | -1.69E-46 |
| MS.gene050432 | MS.gene98786 | 0.808596 | 2.87E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene98786 | 0.817449 | 3.28E-52 | -1.69E-46 |
| MS.gene050516 | MS.gene98786 | 0.800033 | 1.74E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene98786 | 0.833876 | 4.14E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene98786 | 0.808693 | 2.73E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene98786 | 0.833593 | 4.88E-56 | -1.69E-46 |
| MS.gene050971 | MS.gene98786 | 0.848151 | 7.36E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene98786 | 0.85091 | 1.25E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene98786 | 0.816653 | 4.95E-52 | -1.69E-46 |
| MS.gene051255 | MS.gene98786 | 0.82512 | 5.57E-54 | -1.69E-46 |
| MS.gene051360 | MS.gene98786 | 0.806831 | 6.80E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene98786 | 0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene98786 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene98786 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene98786 | 0.803861 | 2.85E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene98786 | 0.856315 | 3.49E-62 | -1.69E-46 |
| MS.gene051877 | MS.gene98786 | 0.82108 | 4.88E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene98786 | -0.85244 | 4.61E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene98786 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene98786 | 0.85403 | 1.61E-61 | -1.69E-46 |
| MS.gene052178 | MS.gene98786 | 0.836551 | 8.76E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene98786 | 0.85069 | 1.44E-60 | -1.69E-46 |
| MS.gene052207 | MS.gene98786 | 0.815415 | 9.35E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene98786 | 0.880892 | 3.77E-70 | -1.69E-46 |
| MS.gene052255 | MS.gene98786 | 0.807198 | 5.68E-50 | -1.69E-46 |
| MS.gene052287 | MS.gene98786 | 0.816301 | 5.93E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene98786 | 0.841901 | 3.59E-58 | -1.69E-46 |
| MS.gene052322 | MS.gene98786 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene98786 | 0.832291 | 1.03E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene98786 | 0.879858 | 8.84E-70 | -1.69E-46 |
| MS.gene052481 | MS.gene98786 | 0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene98786 | 0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene98786 | 0.873403 | 1.51E-67 | -1.69E-46 |
| MS.gene05316 | MS.gene98786 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene98786 | 0.833679 | 4.64E-56 | -1.69E-46 |
| MS.gene053557 | MS.gene98786 | 0.824051 | 9.95E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene98786 | 0.840625 | 7.77E-58 | -1.69E-46 |
| MS.gene053813 | MS.gene98786 | 0.849866 | 2.46E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene98786 | 0.886947 | 2.19E-72 | -1.69E-46 |
| MS.gene053928 | MS.gene98786 | 0.806362 | 8.54E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene98786 | 0.863869 | 1.83E-64 | -1.69E-46 |
| MS.gene054011 | MS.gene98786 | 0.873345 | 1.58E-67 | -1.69E-46 |
| MS.gene054012 | MS.gene98786 | 0.873247 | 1.70E-67 | -1.69E-46 |
| MS.gene054013 | MS.gene98786 | 0.871012 | 9.45E-67 | -1.69E-46 |
| MS.gene054123 | MS.gene98786 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene98786 | 0.840613 | 7.83E-58 | -1.69E-46 |
| MS.gene054184 | MS.gene98786 | 0.806024 | 1.01E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene98786 | 0.806586 | 7.65E-50 | -1.69E-46 |
| MS.gene054214 | MS.gene98786 | 0.821793 | 3.34E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene98786 | 0.814553 | 1.45E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene98786 | 0.852164 | 5.53E-61 | -1.69E-46 |
| MS.gene054556 | MS.gene98786 | 0.80922 | 2.11E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene98786 | 0.848227 | 7.01E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene98786 | 0.896586 | 3.20E-76 | -1.69E-46 |
| MS.gene055390 | MS.gene98786 | 0.84683 | 1.70E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene98786 | 0.874427 | 6.81E-68 | -1.69E-46 |
| MS.gene055428 | MS.gene98786 | 0.863513 | 2.36E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene98786 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene98786 | 0.870429 | 1.47E-66 | -1.69E-46 |
| MS.gene055666 | MS.gene98786 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene98786 | 0.92742 | 1.20E-91 | -1.69E-46 |
| MS.gene056407 | MS.gene98786 | 0.834535 | 2.83E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene98786 | 0.844478 | 7.37E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene98786 | 0.803105 | 4.09E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene98786 | 0.813391 | 2.62E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene98786 | 0.838099 | 3.52E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene98786 | 0.829898 | 3.98E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene98786 | 0.816033 | 6.81E-52 | -1.69E-46 |
| MS.gene056899 | MS.gene98786 | -0.819405 | 1.18E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene98786 | 0.831407 | 1.70E-55 | -1.69E-46 |
| MS.gene056931 | MS.gene98786 | 0.867301 | 1.51E-65 | -1.69E-46 |
| MS.gene056933 | MS.gene98786 | 0.865881 | 4.28E-65 | -1.69E-46 |
| MS.gene056935 | MS.gene98786 | 0.861229 | 1.19E-63 | -1.69E-46 |
| MS.gene056942 | MS.gene98786 | 0.814199 | 1.74E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene98786 | 0.858686 | 6.95E-63 | -1.69E-46 |
| MS.gene057121 | MS.gene98786 | 0.828881 | 7.02E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene98786 | 0.816317 | 5.89E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene98786 | 0.821596 | 3.71E-53 | -1.69E-46 |
| MS.gene05733 | MS.gene98786 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene98786 | 0.824013 | 1.02E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene98786 | 0.820418 | 6.93E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene98786 | 0.825448 | 4.66E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene98786 | 0.83071 | 2.52E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene98786 | 0.86896 | 4.43E-66 | -1.69E-46 |
| MS.gene057779 | MS.gene98786 | 0.813065 | 3.09E-51 | -1.69E-46 |
| MS.gene057782 | MS.gene98786 | 0.816508 | 5.33E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene98786 | 0.829447 | 5.12E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene98786 | 0.860449 | 2.05E-63 | -1.69E-46 |
| MS.gene057825 | MS.gene98786 | 0.80517 | 1.52E-49 | -1.69E-46 |
| MS.gene057826 | MS.gene98786 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene98786 | 0.86758 | 1.23E-65 | -1.69E-46 |
| MS.gene058007 | MS.gene98786 | 0.817073 | 3.98E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene98786 | 0.875124 | 3.95E-68 | -1.69E-46 |
| MS.gene058142 | MS.gene98786 | 0.804649 | 1.95E-49 | -1.69E-46 |
| MS.gene058218 | MS.gene98786 | -0.813108 | 3.02E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene98786 | 0.817099 | 3.93E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene98786 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene98786 | 0.837593 | 4.74E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene98786 | 0.887277 | 1.64E-72 | -1.69E-46 |
| MS.gene058710 | MS.gene98786 | 0.815223 | 1.03E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene98786 | 0.84029 | 9.50E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene98786 | 0.870531 | 1.36E-66 | -1.69E-46 |
| MS.gene058993 | MS.gene98786 | 0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene98786 | 0.8373 | 5.64E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene98786 | 0.889833 | 1.70E-73 | -1.69E-46 |
| MS.gene059082 | MS.gene98786 | 0.805501 | 1.30E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene98786 | 0.809706 | 1.66E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene98786 | 0.884571 | 1.71E-71 | -1.69E-46 |
| MS.gene059366 | MS.gene98786 | 0.805714 | 1.17E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene98786 | 0.861733 | 8.34E-64 | -1.69E-46 |
| MS.gene059462 | MS.gene98786 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene98786 | 0.84739 | 1.19E-59 | -1.69E-46 |
| MS.gene059536 | MS.gene98786 | 0.810961 | 8.89E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene98786 | 0.85163 | 7.83E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene98786 | 0.838404 | 2.94E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene98786 | 0.85537 | 6.60E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene98786 | 0.860891 | 1.51E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene98786 | 0.861178 | 1.23E-63 | -1.69E-46 |
| MS.gene059711 | MS.gene98786 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene98786 | 0.881964 | 1.55E-70 | -1.69E-46 |
| MS.gene059894 | MS.gene98786 | 0.84877 | 4.96E-60 | -1.69E-46 |
| MS.gene059974 | MS.gene98786 | 0.860455 | 2.04E-63 | -1.69E-46 |
| MS.gene060005 | MS.gene98786 | 0.846514 | 2.07E-59 | -1.69E-46 |
| MS.gene06037 | MS.gene98786 | 0.858302 | 9.04E-63 | -1.69E-46 |
| MS.gene060403 | MS.gene98786 | 0.80839 | 3.17E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene98786 | 0.868591 | 5.83E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene98786 | 0.814525 | 1.47E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene98786 | 0.840169 | 1.02E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene98786 | 0.884573 | 1.71E-71 | -1.69E-46 |
| MS.gene061051 | MS.gene98786 | -0.839277 | 1.74E-57 | -1.69E-46 |
| MS.gene061071 | MS.gene98786 | 0.82597 | 3.51E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene98786 | 0.809861 | 1.54E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene98786 | 0.800405 | 1.46E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98786.t1 | MTR_7g067380 | 96.053 | 228 | 9 | 0 | 1 | 228 | 1 | 228 | 3.55e-159 | 456 |
| MS.gene98786.t1 | MTR_7g067380 | 99.342 | 152 | 1 | 0 | 229 | 380 | 347 | 498 | 1.40e-102 | 312 |
| MS.gene98786.t1 | MTR_4g415290 | 68.198 | 283 | 62 | 4 | 3 | 284 | 1 | 256 | 1.05e-122 | 363 |
| MS.gene98786.t1 | MTR_4g415290 | 88.000 | 150 | 18 | 0 | 229 | 378 | 345 | 494 | 2.05e-89 | 278 |
| MS.gene98786.t1 | MTR_8g030620 | 59.556 | 225 | 87 | 3 | 7 | 227 | 8 | 232 | 3.14e-86 | 270 |
| MS.gene98786.t1 | MTR_8g030620 | 68.919 | 148 | 45 | 1 | 229 | 375 | 352 | 499 | 5.20e-67 | 220 |
| MS.gene98786.t1 | MTR_1g040500 | 68.000 | 150 | 48 | 0 | 231 | 380 | 349 | 498 | 8.24e-66 | 219 |
| MS.gene98786.t1 | MTR_1g040500 | 49.756 | 205 | 102 | 1 | 11 | 215 | 7 | 210 | 6.33e-65 | 216 |
| MS.gene98786.t1 | MTR_3g048330 | 63.758 | 149 | 54 | 0 | 229 | 377 | 129 | 277 | 4.25e-64 | 206 |
| MS.gene98786.t1 | MTR_5g080360 | 66.234 | 154 | 48 | 1 | 220 | 373 | 323 | 472 | 1.45e-63 | 211 |
| MS.gene98786.t1 | MTR_5g080360 | 39.487 | 195 | 111 | 2 | 25 | 215 | 3 | 194 | 2.51e-38 | 144 |
| MS.gene98786.t1 | MTR_3g448430 | 63.448 | 145 | 53 | 0 | 229 | 373 | 367 | 511 | 5.34e-61 | 204 |
| MS.gene98786.t1 | MTR_3g448430 | 40.758 | 211 | 114 | 5 | 19 | 226 | 43 | 245 | 4.57e-40 | 149 |
| MS.gene98786.t1 | MTR_5g091660 | 64.336 | 143 | 51 | 0 | 231 | 373 | 387 | 529 | 1.38e-59 | 201 |
| MS.gene98786.t1 | MTR_5g091660 | 41.624 | 197 | 106 | 4 | 19 | 214 | 60 | 248 | 2.78e-38 | 144 |
| MS.gene98786.t1 | MTR_5g061520 | 57.718 | 149 | 62 | 1 | 231 | 378 | 338 | 486 | 2.89e-53 | 184 |
| MS.gene98786.t1 | MTR_5g061520 | 37.415 | 147 | 88 | 2 | 10 | 156 | 2 | 144 | 1.34e-21 | 96.7 |
| MS.gene98786.t1 | MTR_1g086650 | 52.318 | 151 | 68 | 2 | 231 | 377 | 383 | 533 | 3.12e-46 | 166 |
| MS.gene98786.t1 | MTR_1g086650 | 36.667 | 210 | 121 | 6 | 9 | 216 | 49 | 248 | 3.08e-27 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98786.t1 | AT2G38110 | 70.667 | 225 | 62 | 2 | 7 | 228 | 8 | 231 | 2.61e-113 | 340 |
| MS.gene98786.t1 | AT2G38110 | 86.093 | 151 | 21 | 0 | 229 | 379 | 350 | 500 | 6.61e-88 | 275 |
| MS.gene98786.t1 | AT1G01610 | 60.849 | 212 | 78 | 3 | 9 | 218 | 10 | 218 | 4.62e-81 | 257 |
| MS.gene98786.t1 | AT1G01610 | 65.269 | 167 | 51 | 3 | 212 | 375 | 333 | 495 | 6.80e-68 | 223 |
| MS.gene98786.t1 | AT4G00400 | 59.193 | 223 | 86 | 3 | 7 | 227 | 8 | 227 | 3.85e-75 | 241 |
| MS.gene98786.t1 | AT4G00400 | 65.116 | 172 | 53 | 3 | 207 | 375 | 327 | 494 | 9.38e-69 | 225 |
| MS.gene98786.t1 | AT3G11430 | 63.529 | 170 | 56 | 2 | 206 | 373 | 316 | 481 | 1.19e-65 | 217 |
| MS.gene98786.t1 | AT3G11430 | 40.816 | 196 | 112 | 2 | 22 | 215 | 9 | 202 | 1.34e-36 | 139 |
| MS.gene98786.t1 | AT5G06090 | 61.176 | 170 | 60 | 2 | 206 | 373 | 314 | 479 | 2.10e-60 | 203 |
| MS.gene98786.t1 | AT5G06090 | 36.239 | 218 | 125 | 3 | 18 | 223 | 3 | 218 | 1.18e-33 | 131 |
| MS.gene98786.t1 | AT1G06520 | 62.069 | 145 | 55 | 0 | 229 | 373 | 440 | 584 | 1.65e-56 | 194 |
| MS.gene98786.t1 | AT1G06520 | 37.981 | 208 | 110 | 8 | 18 | 212 | 98 | 299 | 1.12e-29 | 120 |
| MS.gene98786.t1 | AT3G11325 | 66.935 | 124 | 41 | 0 | 250 | 373 | 249 | 372 | 2.20e-52 | 179 |
| MS.gene98786.t1 | AT3G11325 | 40.952 | 105 | 62 | 0 | 34 | 138 | 9 | 113 | 1.19e-18 | 87.0 |
| MS.gene98786.t1 | AT3G11325 | 66.935 | 124 | 41 | 0 | 250 | 373 | 246 | 369 | 2.48e-52 | 179 |
| MS.gene98786.t1 | AT3G11325 | 40.952 | 105 | 62 | 0 | 34 | 138 | 6 | 110 | 1.30e-18 | 87.0 |
| MS.gene98786.t1 | AT1G02390 | 51.316 | 152 | 68 | 1 | 231 | 376 | 379 | 530 | 1.19e-45 | 164 |
| MS.gene98786.t1 | AT1G02390 | 30.973 | 226 | 135 | 7 | 2 | 214 | 21 | 238 | 1.49e-20 | 93.6 |
| MS.gene98786.t1 | AT4G01950 | 54.167 | 144 | 65 | 1 | 231 | 373 | 374 | 517 | 4.34e-43 | 157 |
| MS.gene98786.t1 | AT4G01950 | 28.452 | 239 | 147 | 9 | 2 | 226 | 19 | 247 | 9.39e-17 | 82.0 |
| MS.gene98786.t1 | AT4G01950 | 54.167 | 144 | 65 | 1 | 231 | 373 | 402 | 545 | 8.44e-43 | 157 |
| MS.gene98786.t1 | AT4G01950 | 28.452 | 239 | 147 | 9 | 2 | 226 | 47 | 275 | 1.08e-16 | 82.0 |
Find 97 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCTAATTTGCCTGATT+TGG | 0.196119 | 7.4:+35997710 | MS.gene98786:CDS |
| TGGAATGTGTTCAATTCTTT+TGG | 0.207233 | 7.4:+35997501 | MS.gene98786:CDS |
| CCACTAACTGTAAGCTCTTT+AGG | 0.240056 | 7.4:-36000555 | None:intergenic |
| CCCAGTTGCCCTTCCCGATT+TGG | 0.258883 | 7.4:-35997625 | None:intergenic |
| TCCTCTGCAGGAAGGGTATA+TGG | 0.267172 | 7.4:+35999849 | MS.gene98786:intron |
| AGTGGATCACATTTAATTCT+TGG | 0.268820 | 7.4:-35999874 | None:intergenic |
| GGATTCATGAACACAAAATA+AGG | 0.281571 | 7.4:-36000495 | None:intergenic |
| CAGTCTAATTTGCCTGATTT+GGG | 0.282394 | 7.4:+35997711 | MS.gene98786:CDS |
| AGGAGCCTGGTGTTCTTGTT+GGG | 0.300559 | 7.4:+35997655 | MS.gene98786:CDS |
| ACCAAATCGGGAAGGGCAAC+TGG | 0.300938 | 7.4:+35997624 | MS.gene98786:CDS |
| GAATTGTTGTACTTTGAAAT+TGG | 0.303441 | 7.4:-35997183 | None:intergenic |
| GGACTTAGAAGTTTAGTTCT+TGG | 0.323980 | 7.4:-35999898 | None:intergenic |
| TCCCTACAAGTTGTTCCTTC+CGG | 0.348891 | 7.4:-36000348 | None:intergenic |
| ATTCCCTTACTACATGCTTA+TGG | 0.355427 | 7.4:+35997272 | MS.gene98786:CDS |
| CCTAAAGAGCTTACAGTTAG+TGG | 0.359503 | 7.4:+36000555 | MS.gene98786:CDS |
| TATATTCAAAGGGTTCTTGC+TGG | 0.360292 | 7.4:+36000606 | MS.gene98786:CDS |
| CGATGGTTTCTGAGACAAAA+AGG | 0.373974 | 7.4:-35997365 | None:intergenic |
| ACGTCCTCAGCGTAGAATTT+CGG | 0.374562 | 7.4:-35997465 | None:intergenic |
| GTAAGAGGATGATTCCTCTT+AGG | 0.380558 | 7.4:-35997314 | None:intergenic |
| GATAAGTATGCTATGCTTGC+TGG | 0.385223 | 7.4:+36000666 | MS.gene98786:CDS |
| ATTAACCGATAGGATTGTTC+CGG | 0.386364 | 7.4:+36000407 | MS.gene98786:CDS |
| AAGGAGCCTGGTGTTCTTGT+TGG | 0.388349 | 7.4:+35997654 | MS.gene98786:CDS |
| GAATTTGTTGGGAGGTGATA+AGG | 0.394560 | 7.4:+35997578 | MS.gene98786:CDS |
| AAGGGCAACTGGGTTTGTTA+AGG | 0.407100 | 7.4:+35997635 | MS.gene98786:CDS |
| CCCAACAAATTCTTAACAAA+TGG | 0.410137 | 7.4:-35997567 | None:intergenic |
| TCTTAGGAAACTACCGGCTT+CGG | 0.414793 | 7.4:-35997298 | None:intergenic |
| TGAAAGGGACGGAGAGTAAG+AGG | 0.416211 | 7.4:-35997329 | None:intergenic |
| AGGGTTCTTGCTGGAACACT+TGG | 0.417445 | 7.4:+36000615 | MS.gene98786:CDS |
| ATAAATACTAACCTTGCAAA+TGG | 0.421413 | 7.4:-35997769 | None:intergenic |
| CCATTTGTTAAGAATTTGTT+GGG | 0.427000 | 7.4:+35997567 | MS.gene98786:CDS |
| TGAACTTGAGGTGACCAAAT+CGG | 0.429869 | 7.4:+35997611 | MS.gene98786:CDS |
| TTGGGAGGTGATAAGGTGAA+TGG | 0.435270 | 7.4:+35997585 | MS.gene98786:CDS |
| CTATCTCCCAGTCCCAAATC+AGG | 0.435448 | 7.4:-35997723 | None:intergenic |
| AGAAGTTTAGTTCTTGGTAG+TGG | 0.438170 | 7.4:-35999892 | None:intergenic |
| GAACTTGAGGTGACCAAATC+GGG | 0.438703 | 7.4:+35997612 | MS.gene98786:CDS |
| TAATTTGCCTGATTTGGGAC+TGG | 0.444415 | 7.4:+35997716 | MS.gene98786:CDS |
| ACTGGGTTTGTTAAGGAGCC+TGG | 0.448681 | 7.4:+35997642 | MS.gene98786:CDS |
| GCCATTTGTTAAGAATTTGT+TGG | 0.451477 | 7.4:+35997566 | MS.gene98786:CDS |
| AATTTGCCTGATTTGGGACT+GGG | 0.452524 | 7.4:+35997717 | MS.gene98786:CDS |
| TGTTTCGTGTTAATTGCAAC+CGG | 0.459361 | 7.4:-36000426 | None:intergenic |
| CAGTGGCACTTTCAAGAGAA+AGG | 0.461557 | 7.4:+36000268 | MS.gene98786:intron |
| GCGCTGAACCGTAGAAGAAA+TGG | 0.471044 | 7.4:-36000372 | None:intergenic |
| TTGAACACATTCCACGTCTC+AGG | 0.473991 | 7.4:-35997492 | None:intergenic |
| ATGCTTATGGCTACCGAAGC+CGG | 0.481581 | 7.4:+35997285 | MS.gene98786:CDS |
| GTCCGGAAGGAACAACTTGT+AGG | 0.482795 | 7.4:+36000346 | MS.gene98786:CDS |
| GTAGGGAACCATTTCTTCTA+CGG | 0.489695 | 7.4:+36000364 | MS.gene98786:CDS |
| CACGGCTAGTCCAAGGTTGA+TGG | 0.489858 | 7.4:+35997539 | MS.gene98786:CDS |
| CTAAGTCAGATGCAACGGTT+TGG | 0.489913 | 7.4:-35997221 | None:intergenic |
| ACTTTGAAATTGGTTTGAAA+TGG | 0.491494 | 7.4:-35997173 | None:intergenic |
| ACCGTTGCATCTGACTTAGA+TGG | 0.496852 | 7.4:+35997225 | MS.gene98786:CDS |
| TGCTTGCTGGTACAGATGGT+AGG | 0.502496 | 7.4:+36000679 | MS.gene98786:CDS |
| AGTTGCAAATTATATTCAAA+GGG | 0.504087 | 7.4:+36000596 | MS.gene98786:CDS |
| AAGTTGCAAATTATATTCAA+AGG | 0.504845 | 7.4:+36000595 | MS.gene98786:CDS |
| GGAGCCTGGTGTTCTTGTTG+GGG | 0.507561 | 7.4:+35997656 | MS.gene98786:CDS |
| AATGGCTCCACCATCAACCT+TGG | 0.511121 | 7.4:-35997549 | None:intergenic |
| ATAAGGAAATTACTTGAAGA+AGG | 0.512819 | 7.4:+36000309 | MS.gene98786:CDS |
| TTGATCTTCATAACCTTCGC+AGG | 0.513177 | 7.4:+35997399 | MS.gene98786:CDS |
| GATTCATGAACACAAAATAA+GGG | 0.515157 | 7.4:-36000494 | None:intergenic |
| ACGTTGTCACGGCTAGTCCA+AGG | 0.524082 | 7.4:+35997532 | MS.gene98786:CDS |
| TGACTTTATGTCCATTTGCA+AGG | 0.526303 | 7.4:+35997758 | MS.gene98786:CDS |
| GGTACGTGAAATATATGAAA+GGG | 0.527101 | 7.4:-35997344 | None:intergenic |
| TGGGAGGTGATAAGGTGAAT+GGG | 0.527752 | 7.4:+35997586 | MS.gene98786:CDS |
| GCTTGCTGGTACAGATGGTA+GGG | 0.533473 | 7.4:+36000680 | MS.gene98786:CDS |
| TCCGGAAGGAACAACTTGTA+GGG | 0.535613 | 7.4:+36000347 | MS.gene98786:CDS |
| ATGACGTGGAGATGGTTTCA+AGG | 0.541289 | 7.4:+35997433 | MS.gene98786:CDS |
| AGTGGCACTTTCAAGAGAAA+GGG | 0.541416 | 7.4:+36000269 | MS.gene98786:intron |
| AAGAATGTGATCTCATAAGT+AGG | 0.541733 | 7.4:-36000522 | None:intergenic |
| GTAGCCATAAGCATGTAGTA+AGG | 0.544461 | 7.4:-35997276 | None:intergenic |
| GCTATGCTTGCTGGTACAGA+TGG | 0.544625 | 7.4:+36000675 | MS.gene98786:CDS |
| TGGTAGGGTTCCATCTAAGA+AGG | 0.546476 | 7.4:+36000695 | MS.gene98786:CDS |
| GATTCCTCTTAGGAAACTAC+CGG | 0.549927 | 7.4:-35997304 | None:intergenic |
| GAAGATCAATGACGTGGAGA+TGG | 0.550046 | 7.4:+35997425 | MS.gene98786:CDS |
| AGGTGACCTAGTGATTTGTC+CGG | 0.552254 | 7.4:+36000329 | MS.gene98786:CDS |
| AGGTACGTGAAATATATGAA+AGG | 0.567264 | 7.4:-35997345 | None:intergenic |
| AGCTCCCCAACAAGAACACC+AGG | 0.567606 | 7.4:-35997660 | None:intergenic |
| GTGATCTCATAAGTAGGCAC+AGG | 0.573493 | 7.4:-36000516 | None:intergenic |
| TGGAAAGCGTTACGTTGTCA+CGG | 0.586333 | 7.4:+35997521 | MS.gene98786:CDS |
| CCAAATCGGGAAGGGCAACT+GGG | 0.587982 | 7.4:+35997625 | MS.gene98786:CDS |
| TGAGGTGACCAAATCGGGAA+GGG | 0.590584 | 7.4:+35997617 | MS.gene98786:CDS |
| AGGACGTGCGTCCTGAGACG+TGG | 0.599900 | 7.4:+35997481 | MS.gene98786:CDS |
| GGCTAGTCCAAGGTTGATGG+TGG | 0.602655 | 7.4:+35997542 | MS.gene98786:CDS |
| GCCATCTAAGTCAGATGCAA+CGG | 0.603277 | 7.4:-35997226 | None:intergenic |
| GAAGCCGGTAGTTTCCTAAG+AGG | 0.606044 | 7.4:+35997300 | MS.gene98786:CDS |
| TAGCCATAAGCATGTAGTAA+GGG | 0.612096 | 7.4:-35997275 | None:intergenic |
| TGCAACCGGAACAATCCTAT+CGG | 0.612877 | 7.4:-36000412 | None:intergenic |
| ATTGATCTTCAGACCTGCGA+AGG | 0.614008 | 7.4:-35997412 | None:intergenic |
| TTCCTTCCGGACAAATCACT+AGG | 0.618250 | 7.4:-36000335 | None:intergenic |
| TTGAGGTGACCAAATCGGGA+AGG | 0.622614 | 7.4:+35997616 | MS.gene98786:CDS |
| TTTGTTAAGAATTTGTTGGG+AGG | 0.632297 | 7.4:+35997570 | MS.gene98786:CDS |
| TTGAGTGTACTAATTTAACA+AGG | 0.633129 | 7.4:+36000640 | MS.gene98786:CDS |
| GGTCTAACACTTTGTGTCCG+CGG | 0.647498 | 7.4:-36000473 | None:intergenic |
| CGTGAAATATATGAAAGGGA+CGG | 0.648172 | 7.4:-35997340 | None:intergenic |
| AAAGAGCTTACAGTTAGTGG+AGG | 0.649872 | 7.4:+36000558 | MS.gene98786:CDS |
| GACCTAGTGATTTGTCCGGA+AGG | 0.669947 | 7.4:+36000333 | MS.gene98786:CDS |
| GGTGAATGGGACTGAACTTG+AGG | 0.678672 | 7.4:+35997599 | MS.gene98786:CDS |
| AGGTCTGAAGATCAATGACG+TGG | 0.721416 | 7.4:+35997419 | MS.gene98786:CDS |
| GTTGCCGAAATTCTACGCTG+AGG | 0.727019 | 7.4:+35997461 | MS.gene98786:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATAAATTTAATTAA+GGG | + | chr7.4:35999528-35999547 | MS.gene98786:intron | 0.0% |
| !!! | AATTATATAATTTTAAATTT+TGG | + | chr7.4:35998238-35998257 | MS.gene98786:intron | 0.0% |
| !! | AGTTATATGTATATATATAA+GGG | - | chr7.4:35998162-35998181 | None:intergenic | 10.0% |
| !! | TAGTTATATGTATATATATA+AGG | - | chr7.4:35998163-35998182 | None:intergenic | 10.0% |
| !!! | AAATTTAATTTCCAAATTTA+GGG | + | chr7.4:35998911-35998930 | MS.gene98786:intron | 10.0% |
| !!! | AAGTTTTTTTTTTTTTTTGA+AGG | - | chr7.4:35997846-35997865 | None:intergenic | 10.0% |
| !! | AAAAAAGAATAATACAATAG+AGG | - | chr7.4:35998705-35998724 | None:intergenic | 15.0% |
| !! | AAAAAGAATAATACAATAGA+GGG | - | chr7.4:35998704-35998723 | None:intergenic | 15.0% |
| !! | AAAATATATTTGTGTCTAAA+TGG | - | chr7.4:35997997-35998016 | None:intergenic | 15.0% |
| !! | AAAATTGTAAACATTAAGTT+GGG | - | chr7.4:35999317-35999336 | None:intergenic | 15.0% |
| !! | CTAAATTTGGAAATTAAATT+TGG | - | chr7.4:35998912-35998931 | None:intergenic | 15.0% |
| !! | TAAAATTGTAAACATTAAGT+TGG | - | chr7.4:35999318-35999337 | None:intergenic | 15.0% |
| !! | TAAACAATTATCAAAATGAA+TGG | + | chr7.4:35999254-35999273 | MS.gene98786:intron | 15.0% |
| !! | TATTAATTCCTTAATACTTT+AGG | + | chr7.4:35998273-35998292 | MS.gene98786:intron | 15.0% |
| !! | TCTAAATTTAAATTGATGTT+TGG | + | chr7.4:35998577-35998596 | MS.gene98786:intron | 15.0% |
| !!! | CAAATTTAATTTCCAAATTT+AGG | + | chr7.4:35998910-35998929 | MS.gene98786:intron | 15.0% |
| !!! | CATATGACTAATTTATTTTT+TGG | + | chr7.4:35999385-35999404 | MS.gene98786:intron | 15.0% |
| !!! | TCTTATAAATTTGTTTTGTA+AGG | + | chr7.4:35999092-35999111 | MS.gene98786:intron | 15.0% |
| !!! | TTCAACTTAATTTCTATTTT+CGG | + | chr7.4:35998474-35998493 | MS.gene98786:intron | 15.0% |
| !! | AAAAGAATAATACAATAGAG+GGG | - | chr7.4:35998703-35998722 | None:intergenic | 20.0% |
| !! | AAATATTGTAGTTAATGACT+TGG | - | chr7.4:35999829-35999848 | None:intergenic | 20.0% |
| !! | AAGTTGCAAATTATATTCAA+AGG | + | chr7.4:36000595-36000614 | MS.gene98786:CDS | 20.0% |
| !! | AGTTGCAAATTATATTCAAA+GGG | + | chr7.4:36000596-36000615 | MS.gene98786:CDS | 20.0% |
| !! | ATCACAACAAATGAAATAAA+TGG | + | chr7.4:35998402-35998421 | MS.gene98786:intron | 20.0% |
| !! | TGGTACAATTATAAACTATT+AGG | + | chr7.4:36000060-36000079 | MS.gene98786:intron | 20.0% |
| !! | TTAAAGTCTCAAATTTACAT+AGG | + | chr7.4:35999724-35999743 | MS.gene98786:intron | 20.0% |
| !! | TTAAGAAAAGTTACTAAGAT+AGG | - | chr7.4:35998528-35998547 | None:intergenic | 20.0% |
| !!! | AATTTGAGACTTTAATCTAA+AGG | - | chr7.4:35999719-35999738 | None:intergenic | 20.0% |
| !!! | ACATTCTATACTCTTATTTA+TGG | + | chr7.4:35998757-35998776 | MS.gene98786:intron | 20.0% |
| !!! | AGGGTTACAATTTTTAATTA+TGG | + | chr7.4:35999547-35999566 | MS.gene98786:intron | 20.0% |
| !!! | ATAAATAAGAGTATAGAATG+TGG | - | chr7.4:35998758-35998777 | None:intergenic | 20.0% |
| !!! | CAATTCATATGACTAATTTT+CGG | + | chr7.4:35999410-35999429 | MS.gene98786:intron | 20.0% |
| !!! | TTCAACTTTAGAAAATATGA+TGG | - | chr7.4:35999506-35999525 | None:intergenic | 20.0% |
| ! | AAAAAGATGCAGCAAATATA+AGG | + | chr7.4:36000292-36000311 | MS.gene98786:CDS | 25.0% |
| ! | AATGATAATAAGGCAACAAT+AGG | - | chr7.4:35999964-35999983 | None:intergenic | 25.0% |
| ! | AGGAATCAAAGTAATTGTTA+AGG | + | chr7.4:36000080-36000099 | MS.gene98786:intron | 25.0% |
| ! | AGTTATATGATGATAAGCTA+TGG | - | chr7.4:35999165-35999184 | None:intergenic | 25.0% |
| ! | ATAAATACTAACCTTGCAAA+TGG | - | chr7.4:35997772-35997791 | None:intergenic | 25.0% |
| ! | ATAAGGAAATTACTTGAAGA+AGG | + | chr7.4:36000309-36000328 | MS.gene98786:CDS | 25.0% |
| ! | ATAGAAACAAAATATGGAAG+TGG | - | chr7.4:35998656-35998675 | None:intergenic | 25.0% |
| ! | ATTAGACTCATGTAAAAGAT+AGG | + | chr7.4:35999120-35999139 | MS.gene98786:intron | 25.0% |
| ! | CATAATACTTTCCATCTTAA+GGG | + | chr7.4:36000002-36000021 | MS.gene98786:intron | 25.0% |
| ! | GAAAAGTTAGGAACATATAT+AGG | - | chr7.4:35997813-35997832 | None:intergenic | 25.0% |
| ! | GAGAGAATAGAAACAAAATA+TGG | - | chr7.4:35998662-35998681 | None:intergenic | 25.0% |
| ! | GATTCATGAACACAAAATAA+GGG | - | chr7.4:36000497-36000516 | None:intergenic | 25.0% |
| ! | GGAATCAAAGTAATTGTTAA+GGG | + | chr7.4:36000081-36000100 | MS.gene98786:intron | 25.0% |
| ! | TAGTGTTTGAAAGTAGTTAA+GGG | - | chr7.4:35998860-35998879 | None:intergenic | 25.0% |
| ! | TTAGTGTTTGAAAGTAGTTA+AGG | - | chr7.4:35998861-35998880 | None:intergenic | 25.0% |
| ! | TTAGTTATATAAGTCATGCA+TGG | + | chr7.4:35998885-35998904 | MS.gene98786:intron | 25.0% |
| ! | TTGAGTGTACTAATTTAACA+AGG | + | chr7.4:36000640-36000659 | MS.gene98786:CDS | 25.0% |
| !! | ATTGGATTTTATGTTCAAAG+TGG | - | chr7.4:35998970-35998989 | None:intergenic | 25.0% |
| !! | CCATTTGTTAAGAATTTGTT+GGG | + | chr7.4:35997567-35997586 | MS.gene98786:CDS | 25.0% |
| !! | TAATTGAGCTAGTTTCTAAT+TGG | - | chr7.4:35999482-35999501 | None:intergenic | 25.0% |
| !! | TAATTTCTATTTTCGGAAGA+AGG | + | chr7.4:35998481-35998500 | MS.gene98786:intron | 25.0% |
| !! | TATGAAGATCAACATTTTGA+TGG | - | chr7.4:35997391-35997410 | None:intergenic | 25.0% |
| !! | TTGGATTTTATGTTCAAAGT+GGG | - | chr7.4:35998969-35998988 | None:intergenic | 25.0% |
| !!! | AAGTCCAATTATTTTTCATG+AGG | + | chr7.4:35999915-35999934 | MS.gene98786:intron | 25.0% |
| !!! | ACTTTGAAATTGGTTTGAAA+TGG | - | chr7.4:35997176-35997195 | None:intergenic | 25.0% |
| !!! | AGTCCAATTATTTTTCATGA+GGG | + | chr7.4:35999916-35999935 | MS.gene98786:intron | 25.0% |
| !!! | ATTTTGTTTCTATTCTCTCA+CGG | + | chr7.4:35998663-35998682 | MS.gene98786:intron | 25.0% |
| !!! | CATTGAGCTTTAAATTTGTA+CGG | - | chr7.4:35999214-35999233 | None:intergenic | 25.0% |
| !!! | GAATTGTTGTACTTTGAAAT+TGG | - | chr7.4:35997186-35997205 | None:intergenic | 25.0% |
| AAAATATGGAAGTGGAAGAA+AGG | - | chr7.4:35998648-35998667 | None:intergenic | 30.0% | |
| AAGAATGTGATCTCATAAGT+AGG | - | chr7.4:36000525-36000544 | None:intergenic | 30.0% | |
| AATACAGAGTGGCATATAAA+AGG | - | chr7.4:35998800-35998819 | None:intergenic | 30.0% | |
| AATTATTATCGTTGTCTACG+TGG | - | chr7.4:35999620-35999639 | None:intergenic | 30.0% | |
| AATTTCACCAATTAAAGCAG+TGG | + | chr7.4:36000251-36000270 | MS.gene98786:intron | 30.0% | |
| AGAAAAGTTACTAAGATAGG+TGG | - | chr7.4:35998525-35998544 | None:intergenic | 30.0% | |
| AGGTACGTGAAATATATGAA+AGG | - | chr7.4:35997348-35997367 | None:intergenic | 30.0% | |
| AGTGGATCACATTTAATTCT+TGG | - | chr7.4:35999877-35999896 | None:intergenic | 30.0% | |
| ATATGATGATAAGCTATGGT+GGG | - | chr7.4:35999161-35999180 | None:intergenic | 30.0% | |
| ATTTACATAGGTGAGAATAG+AGG | + | chr7.4:35999736-35999755 | MS.gene98786:intron | 30.0% | |
| CCCAACAAATTCTTAACAAA+TGG | - | chr7.4:35997570-35997589 | None:intergenic | 30.0% | |
| CTACCCTCATGAAAAATAAT+TGG | - | chr7.4:35999922-35999941 | None:intergenic | 30.0% | |
| GATCTATAAAGCCCTAAATT+TGG | - | chr7.4:35998925-35998944 | None:intergenic | 30.0% | |
| GCATAATACTTTCCATCTTA+AGG | + | chr7.4:36000001-36000020 | MS.gene98786:intron | 30.0% | |
| GGATTCATGAACACAAAATA+AGG | - | chr7.4:36000498-36000517 | None:intergenic | 30.0% | |
| GGTACGTGAAATATATGAAA+GGG | - | chr7.4:35997347-35997366 | None:intergenic | 30.0% | |
| TAGCCATAGGAATGATAATA+AGG | - | chr7.4:35999974-35999993 | None:intergenic | 30.0% | |
| TATATGATGATAAGCTATGG+TGG | - | chr7.4:35999162-35999181 | None:intergenic | 30.0% | |
| TGTTGTGATCTTAAAAACCA+TGG | - | chr7.4:35998391-35998410 | None:intergenic | 30.0% | |
| TTATGACTTATAAGAGAGAG+AGG | - | chr7.4:35998837-35998856 | None:intergenic | 30.0% | |
| ! | AAGTGTGTTTTATGGTACAA+CGG | + | chr7.4:36000449-36000468 | MS.gene98786:CDS | 30.0% |
| ! | ACGAAACAAAGTGTGTTTTA+TGG | + | chr7.4:36000441-36000460 | MS.gene98786:CDS | 30.0% |
| ! | ATAAGAGTATAGAATGTGGA+TGG | - | chr7.4:35998754-35998773 | None:intergenic | 30.0% |
| ! | GCCATTTGTTAAGAATTTGT+TGG | + | chr7.4:35997566-35997585 | MS.gene98786:CDS | 30.0% |
| ! | GGAGTATTTGAAGAAAAGTT+AGG | - | chr7.4:35997825-35997844 | None:intergenic | 30.0% |
| ! | TGGAATGTGTTCAATTCTTT+TGG | + | chr7.4:35997501-35997520 | MS.gene98786:CDS | 30.0% |
| ! | TGTGATGTCCTAAAGTATTA+AGG | - | chr7.4:35998284-35998303 | None:intergenic | 30.0% |
| ! | TTGCCTTATTATCATTCCTA+TGG | + | chr7.4:35999968-35999987 | MS.gene98786:intron | 30.0% |
| ! | TTGTCCAAGATTTTCTTTGA+GGG | + | chr7.4:35997939-35997958 | MS.gene98786:intron | 30.0% |
| ! | TTTGTCCAAGATTTTCTTTG+AGG | + | chr7.4:35997938-35997957 | MS.gene98786:intron | 30.0% |
| ! | TTTTATATAGTTGTGCATGC+TGG | + | chr7.4:35999333-35999352 | MS.gene98786:intron | 30.0% |
| !! | ATGGAAAGTATTATGCCAAT+TGG | - | chr7.4:35999997-36000016 | None:intergenic | 30.0% |
| !! | TTTGTTAAGAATTTGTTGGG+AGG | + | chr7.4:35997570-35997589 | MS.gene98786:CDS | 30.0% |
| !!! | CAAGCAATTTTTTCTGGTAA+GGG | - | chr7.4:36000042-36000061 | None:intergenic | 30.0% |
| !!! | TTGTACCAAGCAATTTTTTC+TGG | - | chr7.4:36000048-36000067 | None:intergenic | 30.0% |
| AACACCCTCAAAGAAAATCT+TGG | - | chr7.4:35997946-35997965 | None:intergenic | 35.0% | |
| AATAAGGCAACAATAGGTGT+TGG | - | chr7.4:35999958-35999977 | None:intergenic | 35.0% | |
| AATATTTACCACCATGCATG+TGG | + | chr7.4:35998727-35998746 | MS.gene98786:intron | 35.0% | |
| ACACCGTTGTATCTTTAACA+TGG | - | chr7.4:35999008-35999027 | None:intergenic | 35.0% | |
| ACGTTGAATGAGATTTAGTG+GGG | + | chr7.4:35999059-35999078 | MS.gene98786:intron | 35.0% | |
| ATCTTAACGTTGTACAGTTG+TGG | + | chr7.4:35998364-35998383 | MS.gene98786:intron | 35.0% | |
| ATCTTCCTATACTCAACCAA+GGG | + | chr7.4:35999282-35999301 | MS.gene98786:intron | 35.0% | |
| ATTAACCGATAGGATTGTTC+CGG | + | chr7.4:36000407-36000426 | MS.gene98786:CDS | 35.0% | |
| ATTCCCTTACTACATGCTTA+TGG | + | chr7.4:35997272-35997291 | MS.gene98786:CDS | 35.0% | |
| CACGTTGAATGAGATTTAGT+GGG | + | chr7.4:35999058-35999077 | MS.gene98786:intron | 35.0% | |
| CCTTACCAGAAAAAATTGCT+TGG | + | chr7.4:36000040-36000059 | MS.gene98786:intron | 35.0% | |
| CGTGAAATATATGAAAGGGA+CGG | - | chr7.4:35997343-35997362 | None:intergenic | 35.0% | |
| CTGCCATGTTAAAGATACAA+CGG | + | chr7.4:35999002-35999021 | MS.gene98786:intron | 35.0% | |
| GTTTAGGTATACCCTTAAGA+TGG | - | chr7.4:36000016-36000035 | None:intergenic | 35.0% | |
| TAACATGGCAGCAAAATACA+AGG | - | chr7.4:35998993-35999012 | None:intergenic | 35.0% | |
| TACTCAACTGAAATACAGAG+TGG | - | chr7.4:35998811-35998830 | None:intergenic | 35.0% | |
| TAGCCATAAGCATGTAGTAA+GGG | - | chr7.4:35997278-35997297 | None:intergenic | 35.0% | |
| TATATTCAAAGGGTTCTTGC+TGG | + | chr7.4:36000606-36000625 | MS.gene98786:CDS | 35.0% | |
| TCACGTTGAATGAGATTTAG+TGG | + | chr7.4:35999057-35999076 | MS.gene98786:intron | 35.0% | |
| TGACTATGACATGTTGCTAT+TGG | + | chr7.4:35998612-35998631 | MS.gene98786:intron | 35.0% | |
| TGACTTTATGTCCATTTGCA+AGG | + | chr7.4:35997758-35997777 | MS.gene98786:CDS | 35.0% | |
| TGTTTCGTGTTAATTGCAAC+CGG | - | chr7.4:36000429-36000448 | None:intergenic | 35.0% | |
| ! | AATATTTTCCTCTGCAGGAA+GGG | + | chr7.4:35999842-35999861 | MS.gene98786:intron | 35.0% |
| ! | ACACCTTTTTGACCTTTTCT+TGG | - | chr7.4:36000123-36000142 | None:intergenic | 35.0% |
| ! | ACTACAATATTTTCCTCTGC+AGG | + | chr7.4:35999837-35999856 | MS.gene98786:intron | 35.0% |
| ! | CAGTCTAATTTGCCTGATTT+GGG | + | chr7.4:35997711-35997730 | MS.gene98786:CDS | 35.0% |
| ! | TCAGTCTAATTTGCCTGATT+TGG | + | chr7.4:35997710-35997729 | MS.gene98786:CDS | 35.0% |
| ! | TTTCTGGTAAGGGAATGTTT+AGG | - | chr7.4:36000032-36000051 | None:intergenic | 35.0% |
| ! | TTTTCGCTGAATTAACCGAT+AGG | + | chr7.4:36000397-36000416 | MS.gene98786:CDS | 35.0% |
| !! | AGAAGTTTAGTTCTTGGTAG+TGG | - | chr7.4:35999895-35999914 | None:intergenic | 35.0% |
| !! | CAAGCTTTTTCCTTCTTAGA+TGG | - | chr7.4:36000708-36000727 | None:intergenic | 35.0% |
| !! | GGACTTAGAAGTTTAGTTCT+TGG | - | chr7.4:35999901-35999920 | None:intergenic | 35.0% |
| !! | GTAAACATTAAGTTGGGACA+TGG | - | chr7.4:35999311-35999330 | None:intergenic | 35.0% |
| !! | TAGGTGGATTGAGTCATAAT+TGG | - | chr7.4:35998509-35998528 | None:intergenic | 35.0% |
| !!! | CCAAGCAATTTTTTCTGGTA+AGG | - | chr7.4:36000043-36000062 | None:intergenic | 35.0% |
| AAAGAGCTTACAGTTAGTGG+AGG | + | chr7.4:36000558-36000577 | MS.gene98786:CDS | 40.0% | |
| AGTGGAAGAAAGGCTCATTA+TGG | - | chr7.4:35998638-35998657 | None:intergenic | 40.0% | |
| AGTGGCACTTTCAAGAGAAA+GGG | + | chr7.4:36000269-36000288 | MS.gene98786:intron | 40.0% | |
| CCACTAACTGTAAGCTCTTT+AGG | - | chr7.4:36000558-36000577 | None:intergenic | 40.0% | |
| CCTAAAGAGCTTACAGTTAG+TGG | + | chr7.4:36000555-36000574 | MS.gene98786:CDS | 40.0% | |
| GATAAGTATGCTATGCTTGC+TGG | + | chr7.4:36000666-36000685 | MS.gene98786:CDS | 40.0% | |
| GATCTTCCTATACTCAACCA+AGG | + | chr7.4:35999281-35999300 | MS.gene98786:intron | 40.0% | |
| GATTCCTCTTAGGAAACTAC+CGG | - | chr7.4:35997307-35997326 | None:intergenic | 40.0% | |
| GCACCAAGAAAAGGTCAAAA+AGG | + | chr7.4:36000117-36000136 | MS.gene98786:intron | 40.0% | |
| GTAAGAGGATGATTCCTCTT+AGG | - | chr7.4:35997317-35997336 | None:intergenic | 40.0% | |
| GTAGCCATAAGCATGTAGTA+AGG | - | chr7.4:35997279-35997298 | None:intergenic | 40.0% | |
| GTAGGGAACCATTTCTTCTA+CGG | + | chr7.4:36000364-36000383 | MS.gene98786:CDS | 40.0% | |
| TCATTCCTATGGCTACCAAT+TGG | + | chr7.4:35999979-35999998 | MS.gene98786:intron | 40.0% | |
| TGAACTTGAGGTGACCAAAT+CGG | + | chr7.4:35997611-35997630 | MS.gene98786:CDS | 40.0% | |
| TGGCAGCAAAATACAAGGAT+TGG | - | chr7.4:35998988-35999007 | None:intergenic | 40.0% | |
| TTGATCTTCATAACCTTCGC+AGG | + | chr7.4:35997399-35997418 | MS.gene98786:CDS | 40.0% | |
| ! | CAATATTTTCCTCTGCAGGA+AGG | + | chr7.4:35999841-35999860 | MS.gene98786:intron | 40.0% |
| ! | TTATGCCAATTGGTAGCCAT+AGG | - | chr7.4:35999987-36000006 | None:intergenic | 40.0% |
| !! | AATTTGCCTGATTTGGGACT+GGG | + | chr7.4:35997717-35997736 | MS.gene98786:CDS | 40.0% |
| !! | CGATGGTTTCTGAGACAAAA+AGG | - | chr7.4:35997368-35997387 | None:intergenic | 40.0% |
| !! | GAAAGTGCCACTGCTTTAAT+TGG | - | chr7.4:36000261-36000280 | None:intergenic | 40.0% |
| !! | GAATTTGTTGGGAGGTGATA+AGG | + | chr7.4:35997578-35997597 | MS.gene98786:CDS | 40.0% |
| !! | TAATTTGCCTGATTTGGGAC+TGG | + | chr7.4:35997716-35997735 | MS.gene98786:CDS | 40.0% |
| !! | TTTTGACCTTTTCTTGGTGC+TGG | - | chr7.4:36000117-36000136 | None:intergenic | 40.0% |
| !!! | GATCAACATTTTGATGGCGA+TGG | - | chr7.4:35997385-35997404 | None:intergenic | 40.0% |
| AATGCAACTGCTGTAACCAC+AGG | - | chr7.4:36000180-36000199 | None:intergenic | 45.0% | |
| ACCGTTGCATCTGACTTAGA+TGG | + | chr7.4:35997225-35997244 | MS.gene98786:CDS | 45.0% | |
| ACGTCCTCAGCGTAGAATTT+CGG | - | chr7.4:35997468-35997487 | None:intergenic | 45.0% | |
| AGGTCTGAAGATCAATGACG+TGG | + | chr7.4:35997419-35997438 | MS.gene98786:CDS | 45.0% | |
| ATGACGTGGAGATGGTTTCA+AGG | + | chr7.4:35997433-35997452 | MS.gene98786:CDS | 45.0% | |
| ATGCAACTGCTGTAACCACA+GGG | - | chr7.4:36000179-36000198 | None:intergenic | 45.0% | |
| ATTGATCTTCAGACCTGCGA+AGG | - | chr7.4:35997415-35997434 | None:intergenic | 45.0% | |
| CAGTGGCACTTTCAAGAGAA+AGG | + | chr7.4:36000268-36000287 | MS.gene98786:intron | 45.0% | |
| CTAAGTCAGATGCAACGGTT+TGG | - | chr7.4:35997224-35997243 | None:intergenic | 45.0% | |
| GAACTTGAGGTGACCAAATC+GGG | + | chr7.4:35997612-35997631 | MS.gene98786:CDS | 45.0% | |
| GAAGATCAATGACGTGGAGA+TGG | + | chr7.4:35997425-35997444 | MS.gene98786:CDS | 45.0% | |
| GCCATCTAAGTCAGATGCAA+CGG | - | chr7.4:35997229-35997248 | None:intergenic | 45.0% | |
| GGATTCCCTTGGTTGAGTAT+AGG | - | chr7.4:35999290-35999309 | None:intergenic | 45.0% | |
| GTGATCTCATAAGTAGGCAC+AGG | - | chr7.4:36000519-36000538 | None:intergenic | 45.0% | |
| GTGGTTACAGCAGTTGCATT+AGG | + | chr7.4:36000180-36000199 | MS.gene98786:intron | 45.0% | |
| TATCGTTGTCTACGTGGTGT+CGG | - | chr7.4:35999614-35999633 | None:intergenic | 45.0% | |
| TCCCTACAAGTTGTTCCTTC+CGG | - | chr7.4:36000351-36000370 | None:intergenic | 45.0% | |
| TCCGGAAGGAACAACTTGTA+GGG | + | chr7.4:36000347-36000366 | MS.gene98786:CDS | 45.0% | |
| TGCAACCGGAACAATCCTAT+CGG | - | chr7.4:36000415-36000434 | None:intergenic | 45.0% | |
| TGGGAGGTGATAAGGTGAAT+GGG | + | chr7.4:35997586-35997605 | MS.gene98786:CDS | 45.0% | |
| TGGTAGGGTTCCATCTAAGA+AGG | + | chr7.4:36000695-36000714 | MS.gene98786:CDS | 45.0% | |
| TTCCTTCCGGACAAATCACT+AGG | - | chr7.4:36000338-36000357 | None:intergenic | 45.0% | |
| TTGAACACATTCCACGTCTC+AGG | - | chr7.4:35997495-35997514 | None:intergenic | 45.0% | |
| TTGGGAGGTGATAAGGTGAA+TGG | + | chr7.4:35997585-35997604 | MS.gene98786:CDS | 45.0% | |
| ! | AGGTGACCTAGTGATTTGTC+CGG | + | chr7.4:36000329-36000348 | MS.gene98786:CDS | 45.0% |
| ! | CAGGGTCTAAAATTGTGCGA+TGG | - | chr7.4:36000161-36000180 | None:intergenic | 45.0% |
| ! | TCGCACAATTTTAGACCCTG+TGG | + | chr7.4:36000161-36000180 | MS.gene98786:intron | 45.0% |
| ! | TTTTATGGTACAACGGTCCG+CGG | + | chr7.4:36000456-36000475 | MS.gene98786:CDS | 45.0% |
| !! | AAGGGCAACTGGGTTTGTTA+AGG | + | chr7.4:35997635-35997654 | MS.gene98786:CDS | 45.0% |
| !! | TCTTAGGAAACTACCGGCTT+CGG | - | chr7.4:35997301-35997320 | None:intergenic | 45.0% |
| !! | TGGAAAGCGTTACGTTGTCA+CGG | + | chr7.4:35997521-35997540 | MS.gene98786:CDS | 45.0% |
| !! | GAAAATTATAAATTTAATTA+AGG | + | chr7.4:35999527-35999546 | MS.gene98786:intron | 5.0% |
| AAGGAGCCTGGTGTTCTTGT+TGG | + | chr7.4:35997654-35997673 | MS.gene98786:CDS | 50.0% | |
| AATGGCTCCACCATCAACCT+TGG | - | chr7.4:35997552-35997571 | None:intergenic | 50.0% | |
| ACCATATACCCTTCCTGCAG+AGG | - | chr7.4:35999853-35999872 | None:intergenic | 50.0% | |
| AGGAGCCTGGTGTTCTTGTT+GGG | + | chr7.4:35997655-35997674 | MS.gene98786:CDS | 50.0% | |
| AGGGTTCTTGCTGGAACACT+TGG | + | chr7.4:36000615-36000634 | MS.gene98786:CDS | 50.0% | |
| AGTTGGGACATGGATTCCCT+TGG | - | chr7.4:35999301-35999320 | None:intergenic | 50.0% | |
| ATGCTTATGGCTACCGAAGC+CGG | + | chr7.4:35997285-35997304 | MS.gene98786:CDS | 50.0% | |
| ATGTGGATGGACCACATGCA+TGG | - | chr7.4:35998741-35998760 | None:intergenic | 50.0% | |
| CGTTGTACAGTTGTGGACCA+TGG | + | chr7.4:35998371-35998390 | MS.gene98786:intron | 50.0% | |
| CTATCTCCCAGTCCCAAATC+AGG | - | chr7.4:35997726-35997745 | None:intergenic | 50.0% | |
| GAAGCCGGTAGTTTCCTAAG+AGG | + | chr7.4:35997300-35997319 | MS.gene98786:CDS | 50.0% | |
| GCGCTGAACCGTAGAAGAAA+TGG | - | chr7.4:36000375-36000394 | None:intergenic | 50.0% | |
| GGTCTAACACTTTGTGTCCG+CGG | - | chr7.4:36000476-36000495 | None:intergenic | 50.0% | |
| GGTGAATGGGACTGAACTTG+AGG | + | chr7.4:35997599-35997618 | MS.gene98786:CDS | 50.0% | |
| GTCCGGAAGGAACAACTTGT+AGG | + | chr7.4:36000346-36000365 | MS.gene98786:CDS | 50.0% | |
| GTTGCCGAAATTCTACGCTG+AGG | + | chr7.4:35997461-35997480 | MS.gene98786:CDS | 50.0% | |
| TGAAAGGGACGGAGAGTAAG+AGG | - | chr7.4:35997332-35997351 | None:intergenic | 50.0% | |
| TGAGGTGACCAAATCGGGAA+GGG | + | chr7.4:35997617-35997636 | MS.gene98786:CDS | 50.0% | |
| TTGAGGTGACCAAATCGGGA+AGG | + | chr7.4:35997616-35997635 | MS.gene98786:CDS | 50.0% | |
| ! | GACCTAGTGATTTGTCCGGA+AGG | + | chr7.4:36000333-36000352 | MS.gene98786:CDS | 50.0% |
| ! | GCTATGCTTGCTGGTACAGA+TGG | + | chr7.4:36000675-36000694 | MS.gene98786:CDS | 50.0% |
| ! | GCTTGCTGGTACAGATGGTA+GGG | + | chr7.4:36000680-36000699 | MS.gene98786:CDS | 50.0% |
| ! | TCCTCTGCAGGAAGGGTATA+TGG | + | chr7.4:35999849-35999868 | MS.gene98786:intron | 50.0% |
| ! | TGCTTGCTGGTACAGATGGT+AGG | + | chr7.4:36000679-36000698 | MS.gene98786:CDS | 50.0% |
| !! | ACTGGGTTTGTTAAGGAGCC+TGG | + | chr7.4:35997642-35997661 | MS.gene98786:CDS | 50.0% |
| !!! | CTTTTCTTGGTGCTGGTGGA+GGG | - | chr7.4:36000110-36000129 | None:intergenic | 50.0% |
| !!! | TGACCTTTTCTTGGTGCTGG+TGG | - | chr7.4:36000114-36000133 | None:intergenic | 50.0% |
| !!! | TTTTCTTGGTGCTGGTGGAG+GGG | - | chr7.4:36000109-36000128 | None:intergenic | 50.0% |
| ACCAAATCGGGAAGGGCAAC+TGG | + | chr7.4:35997624-35997643 | MS.gene98786:CDS | 55.0% | |
| AGCTCCCCAACAAGAACACC+AGG | - | chr7.4:35997663-35997682 | None:intergenic | 55.0% | |
| CCAAATCGGGAAGGGCAACT+GGG | + | chr7.4:35997625-35997644 | MS.gene98786:CDS | 55.0% | |
| CCTCCACCAGCACCAAGAAA+AGG | + | chr7.4:36000108-36000127 | MS.gene98786:intron | 55.0% | |
| GGAGCCTGGTGTTCTTGTTG+GGG | + | chr7.4:35997656-35997675 | MS.gene98786:CDS | 55.0% | |
| TGGATGGACCACATGCATGG+TGG | - | chr7.4:35998738-35998757 | None:intergenic | 55.0% | |
| ! | ACGTTGTCACGGCTAGTCCA+AGG | + | chr7.4:35997532-35997551 | MS.gene98786:CDS | 55.0% |
| ! | CACGGCTAGTCCAAGGTTGA+TGG | + | chr7.4:35997539-35997558 | MS.gene98786:CDS | 55.0% |
| !! | GGCTAGTCCAAGGTTGATGG+TGG | + | chr7.4:35997542-35997561 | MS.gene98786:CDS | 55.0% |
| !!! | CCTTTTCTTGGTGCTGGTGG+AGG | - | chr7.4:36000111-36000130 | None:intergenic | 55.0% |
| CCCAGTTGCCCTTCCCGATT+TGG | - | chr7.4:35997628-35997647 | None:intergenic | 60.0% | |
| AGGACGTGCGTCCTGAGACG+TGG | + | chr7.4:35997481-35997500 | MS.gene98786:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 35997153 | 36000728 | 35997153 | ID=MS.gene98786 |
| chr7.4 | mRNA | 35997153 | 36000728 | 35997153 | ID=MS.gene98786.t1;Parent=MS.gene98786 |
| chr7.4 | exon | 35997153 | 35997779 | 35997153 | ID=MS.gene98786.t1.exon1;Parent=MS.gene98786.t1 |
| chr7.4 | CDS | 35997153 | 35997779 | 35997153 | ID=cds.MS.gene98786.t1;Parent=MS.gene98786.t1 |
| chr7.4 | exon | 35999859 | 35999916 | 35999859 | ID=MS.gene98786.t1.exon2;Parent=MS.gene98786.t1 |
| chr7.4 | CDS | 35999859 | 35999916 | 35999859 | ID=cds.MS.gene98786.t1;Parent=MS.gene98786.t1 |
| chr7.4 | exon | 36000271 | 36000728 | 36000271 | ID=MS.gene98786.t1.exon3;Parent=MS.gene98786.t1 |
| chr7.4 | CDS | 36000271 | 36000728 | 36000271 | ID=cds.MS.gene98786.t1;Parent=MS.gene98786.t1 |
| Gene Sequence |
| Protein sequence |
