Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23254.t1 | RHN42899.1 | 92.1 | 279 | 19 | 1 | 1 | 279 | 1 | 276 | 1.10E-147 | 532.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23254.t1 | A0A072TVA7 | 92.1 | 279 | 19 | 1 | 1 | 279 | 1 | 276 | 7.6e-148 | 532.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene23254 | 0.800172 | 1.63E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene23254 | 0.824967 | 6.06E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene23254 | 0.855008 | 8.41E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene23254 | 0.812132 | 4.94E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene23254 | 0.819061 | 1.42E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene23254 | 0.805208 | 1.49E-49 | -1.69E-46 |
| MS.gene049657 | MS.gene23254 | 0.811196 | 7.90E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene23254 | 0.839023 | 2.03E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene23254 | 0.828918 | 6.88E-55 | -1.69E-46 |
| MS.gene050216 | MS.gene23254 | 0.815925 | 7.20E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene23254 | 0.837402 | 5.31E-57 | -1.69E-46 |
| MS.gene050381 | MS.gene23254 | -0.834387 | 3.09E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene23254 | 0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene23254 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene23254 | 0.862445 | 5.04E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene23254 | 0.81726 | 3.62E-52 | -1.69E-46 |
| MS.gene050520 | MS.gene23254 | 0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene23254 | 0.837939 | 3.87E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene23254 | 0.815472 | 9.08E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene23254 | 0.818543 | 1.86E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene23254 | 0.811566 | 6.57E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene23254 | 0.811688 | 6.18E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene23254 | 0.867811 | 1.04E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene23254 | 0.872553 | 2.91E-67 | -1.69E-46 |
| MS.gene050950 | MS.gene23254 | 0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene23254 | 0.847273 | 1.28E-59 | -1.69E-46 |
| MS.gene051268 | MS.gene23254 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene05141 | MS.gene23254 | -0.8194 | 1.19E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene23254 | 0.865301 | 6.52E-65 | -1.69E-46 |
| MS.gene051551 | MS.gene23254 | 0.826346 | 2.85E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene23254 | 0.870594 | 1.30E-66 | -1.69E-46 |
| MS.gene051941 | MS.gene23254 | 0.819041 | 1.43E-52 | -1.69E-46 |
| MS.gene051946 | MS.gene23254 | -0.828386 | 9.25E-55 | -1.69E-46 |
| MS.gene052066 | MS.gene23254 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene23254 | 0.874238 | 7.90E-68 | -1.69E-46 |
| MS.gene052413 | MS.gene23254 | 0.834433 | 3.01E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene23254 | 0.846431 | 2.18E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene23254 | 0.851287 | 9.79E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene23254 | 0.834582 | 2.76E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene23254 | 0.84321 | 1.61E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene23254 | 0.836713 | 7.96E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene23254 | 0.819482 | 1.14E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene23254 | 0.85827 | 9.25E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene23254 | 0.816373 | 5.72E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene23254 | 0.824622 | 7.31E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene23254 | 0.857404 | 1.67E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene23254 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene053549 | MS.gene23254 | -0.81808 | 2.36E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene23254 | 0.836283 | 1.02E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene23254 | 0.865034 | 7.91E-65 | -1.69E-46 |
| MS.gene054003 | MS.gene23254 | 0.847265 | 1.29E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene23254 | 0.864659 | 1.04E-64 | -1.69E-46 |
| MS.gene05470 | MS.gene23254 | 0.829851 | 4.09E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene23254 | 0.836194 | 1.08E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene23254 | 0.819835 | 9.43E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene23254 | 0.830257 | 3.25E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene23254 | 0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene055629 | MS.gene23254 | 0.866682 | 2.39E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene23254 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene23254 | 0.832998 | 6.86E-56 | -1.69E-46 |
| MS.gene05601 | MS.gene23254 | 0.816817 | 4.55E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene23254 | 0.8507 | 1.43E-60 | -1.69E-46 |
| MS.gene056166 | MS.gene23254 | 0.838784 | 2.34E-57 | -1.69E-46 |
| MS.gene056310 | MS.gene23254 | -0.817808 | 2.72E-52 | -1.69E-46 |
| MS.gene056313 | MS.gene23254 | -0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene056446 | MS.gene23254 | 0.834527 | 2.85E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene23254 | 0.859653 | 3.56E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene23254 | 0.858185 | 9.80E-63 | -1.69E-46 |
| MS.gene056647 | MS.gene23254 | -0.801708 | 7.93E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene23254 | 0.821797 | 3.34E-53 | -1.69E-46 |
| MS.gene056878 | MS.gene23254 | 0.842963 | 1.88E-58 | -1.69E-46 |
| MS.gene057014 | MS.gene23254 | -0.805743 | 1.15E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene23254 | 0.831383 | 1.72E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene23254 | 0.800528 | 1.38E-48 | -1.69E-46 |
| MS.gene05787 | MS.gene23254 | 0.864678 | 1.02E-64 | -1.69E-46 |
| MS.gene058157 | MS.gene23254 | 0.832598 | 8.63E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene23254 | -0.816894 | 4.37E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene23254 | -0.812521 | 4.07E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene23254 | -0.813011 | 3.18E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene23254 | 0.810444 | 1.15E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene23254 | 0.831615 | 1.51E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene23254 | 0.800285 | 1.55E-48 | -1.69E-46 |
| MS.gene058420 | MS.gene23254 | 0.872902 | 2.23E-67 | -1.69E-46 |
| MS.gene059022 | MS.gene23254 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene23254 | 0.800648 | 1.31E-48 | -1.69E-46 |
| MS.gene059045 | MS.gene23254 | -0.814631 | 1.40E-51 | -1.69E-46 |
| MS.gene059223 | MS.gene23254 | -0.812366 | 4.40E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene23254 | 0.871061 | 9.10E-67 | -1.69E-46 |
| MS.gene059368 | MS.gene23254 | 0.815899 | 7.30E-52 | -1.69E-46 |
| MS.gene059517 | MS.gene23254 | 0.860489 | 1.99E-63 | -1.69E-46 |
| MS.gene059680 | MS.gene23254 | 0.837578 | 4.78E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene23254 | 0.815243 | 1.02E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene23254 | 0.85259 | 4.18E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene23254 | 0.850729 | 1.41E-60 | -1.69E-46 |
| MS.gene060187 | MS.gene23254 | -0.80305 | 4.19E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene23254 | 0.846258 | 2.43E-59 | -1.69E-46 |
| MS.gene060595 | MS.gene23254 | -0.818398 | 2.00E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene23254 | 0.883358 | 4.80E-71 | -1.69E-46 |
| MS.gene06077 | MS.gene23254 | 0.865331 | 6.38E-65 | -1.69E-46 |
| MS.gene060982 | MS.gene23254 | 0.83407 | 3.71E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23254.t1 | MTR_8g090055 | 92.115 | 279 | 19 | 1 | 1 | 279 | 1 | 276 | 0.0 | 511 |
| MS.gene23254.t1 | MTR_5g037310 | 39.552 | 268 | 136 | 8 | 13 | 265 | 10 | 266 | 1.81e-53 | 176 |
| MS.gene23254.t1 | MTR_5g037310 | 38.276 | 290 | 148 | 10 | 13 | 282 | 10 | 288 | 2.20e-53 | 176 |
| MS.gene23254.t1 | MTR_4g105550 | 28.261 | 276 | 163 | 10 | 13 | 265 | 12 | 275 | 9.87e-25 | 101 |
| MS.gene23254.t1 | MTR_4g123700 | 27.778 | 252 | 157 | 8 | 26 | 266 | 27 | 264 | 1.88e-21 | 92.4 |
| MS.gene23254.t1 | MTR_4g132450 | 27.407 | 270 | 154 | 11 | 27 | 272 | 32 | 283 | 2.83e-21 | 92.4 |
| MS.gene23254.t1 | MTR_2g023970 | 28.148 | 270 | 150 | 12 | 28 | 272 | 19 | 269 | 4.11e-20 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23254.t1 | AT1G10380 | 38.956 | 249 | 131 | 6 | 32 | 265 | 28 | 270 | 2.65e-43 | 150 |
| MS.gene23254.t1 | AT1G10380 | 38.956 | 249 | 131 | 6 | 32 | 265 | 28 | 270 | 6.51e-43 | 149 |
| MS.gene23254.t1 | AT1G11915 | 28.674 | 279 | 158 | 13 | 7 | 258 | 1 | 265 | 4.36e-21 | 91.7 |
| MS.gene23254.t1 | AT3G17350 | 29.134 | 254 | 149 | 10 | 33 | 268 | 31 | 271 | 2.47e-19 | 85.9 |
| MS.gene23254.t1 | AT3G17350 | 28.980 | 245 | 144 | 9 | 33 | 260 | 31 | 262 | 4.50e-18 | 82.8 |
| MS.gene23254.t1 | AT5G50290 | 26.357 | 258 | 154 | 11 | 32 | 265 | 21 | 266 | 1.41e-15 | 75.9 |
Find 89 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGTGGAGGAAGATATT+TGG | 0.258075 | 7.3:+53873707 | None:intergenic |
| CGGGGAACCTCGACGGCAAC+GGG | 0.267401 | 7.3:-53873540 | MS.gene23254:CDS |
| GTGTATGAAATGGAGGTTAT+AGG | 0.283646 | 7.3:+53873823 | None:intergenic |
| ATACAAGTCAAGTATCCTTT+TGG | 0.355121 | 7.3:-53873949 | MS.gene23254:CDS |
| TTTGATGTGCATGTTATGTA+TGG | 0.360995 | 7.3:+53873892 | None:intergenic |
| CTCACAACTAGTACATTTAG+TGG | 0.392056 | 7.3:+53873381 | None:intergenic |
| ACACAAACAAATCCACTTCC+TGG | 0.398611 | 7.3:+53873328 | None:intergenic |
| ATCAAAACCAGGATTTCCTT+TGG | 0.418071 | 7.3:-53873261 | MS.gene23254:CDS |
| GATCGTAATTAGAGCAATCA+AGG | 0.418096 | 7.3:+53873281 | None:intergenic |
| GTTATGTATGGGTTGAATAG+TGG | 0.421768 | 7.3:+53873904 | None:intergenic |
| GAATGTCTGGAGTTCCATCT+TGG | 0.421862 | 7.3:-53872446 | MS.gene23254:CDS |
| GTTAAGTCTATGCCAAAGTT+TGG | 0.422132 | 7.3:+53873739 | None:intergenic |
| GATCCTACTCATTGGGTTTG+TGG | 0.422171 | 7.3:-53873448 | MS.gene23254:CDS |
| TCAAAACCAGGATTTCCTTT+GGG | 0.424220 | 7.3:-53873260 | MS.gene23254:CDS |
| TTTGTTTGTGTTTGTAAAGG+TGG | 0.424363 | 7.3:-53873316 | MS.gene23254:CDS |
| TGTATGAAATGGAGGTTATA+GGG | 0.425846 | 7.3:+53873824 | None:intergenic |
| CCCTACCGATCCTACTCATT+GGG | 0.428780 | 7.3:-53873455 | MS.gene23254:CDS |
| CCGGGGAACCTCGACGGCAA+CGG | 0.439474 | 7.3:-53873541 | MS.gene23254:CDS |
| TATACACAACATGTGTTAGT+AGG | 0.444066 | 7.3:+53873568 | None:intergenic |
| TTTGGCACAGGTCCTGGTTG+CGG | 0.445245 | 7.3:-53873931 | MS.gene23254:CDS |
| TATGAACAGTTGGGAATGTC+TGG | 0.453180 | 7.3:-53872459 | MS.gene23254:intron |
| ACCCTACCGATCCTACTCAT+TGG | 0.464490 | 7.3:-53873456 | MS.gene23254:CDS |
| CAGAGTCCCAAAGGAAATCC+TGG | 0.467751 | 7.3:+53873254 | None:intergenic |
| ATGCAAACCTCACCAAACTT+TGG | 0.468525 | 7.3:-53873751 | MS.gene23254:CDS |
| TACATAACATGCACATCAAA+CGG | 0.472131 | 7.3:-53873889 | MS.gene23254:CDS |
| AAGTTGAGGAGGGTGGAAAG+AGG | 0.482013 | 7.3:+53874042 | None:intergenic |
| GTCTGGAGTTCCATCTTGGC+TGG | 0.482605 | 7.3:-53872442 | MS.gene23254:CDS |
| CACATGTTGTGTATACTCAC+CGG | 0.497181 | 7.3:-53873560 | MS.gene23254:CDS |
| ATCAAAAGAAGTGTCACAAA+TGG | 0.498238 | 7.3:+53873654 | None:intergenic |
| TACTCATTGGGTTTGTGGCG+TGG | 0.499146 | 7.3:-53873443 | MS.gene23254:CDS |
| GGATCATGAAGAAGTTGAGG+AGG | 0.499775 | 7.3:+53874031 | None:intergenic |
| AGTAGTAGTGGTAGTGCCAT+TGG | 0.501269 | 7.3:+53874069 | None:intergenic |
| GGAGGATCATGAAGAAGTTG+AGG | 0.505398 | 7.3:+53874028 | None:intergenic |
| GAAAGAGGTGGTAGTAGTAG+TGG | 0.510292 | 7.3:+53874057 | None:intergenic |
| CAACCAGGACCTGTGCCAAA+AGG | 0.520035 | 7.3:+53873934 | None:intergenic |
| AGTGGAAGTGGTGTATGAAA+TGG | 0.521135 | 7.3:+53873813 | None:intergenic |
| GAAAATGATACCAGCCAAGA+TGG | 0.521207 | 7.3:+53872432 | None:intergenic |
| GCAAGAGAGGAGGATGAAAG+TGG | 0.526113 | 7.3:+53873693 | None:intergenic |
| CCGTTGCCGTCGAGGTTCCC+CGG | 0.529751 | 7.3:+53873541 | None:intergenic |
| AATAGTGGGGATCCGCAACC+AGG | 0.530035 | 7.3:+53873919 | None:intergenic |
| CTCTAATTACGATCAAAACC+AGG | 0.530696 | 7.3:-53873272 | MS.gene23254:CDS |
| GGATACGCTCCTCCAGGAAG+TGG | 0.534984 | 7.3:-53873340 | MS.gene23254:CDS |
| CATGAAGAAGTTGAGGAGGG+TGG | 0.540295 | 7.3:+53874035 | None:intergenic |
| GGATTTGTTTGTGTTTGTAA+AGG | 0.540887 | 7.3:-53873319 | MS.gene23254:CDS |
| TGTGAGTATGAGAGTGGAAG+TGG | 0.545933 | 7.3:+53873801 | None:intergenic |
| ACTGGTGTTGAGGCTGTTGG+TGG | 0.547811 | 7.3:+53873994 | None:intergenic |
| ACATGTTGTGTATACTCACC+GGG | 0.550531 | 7.3:-53873559 | MS.gene23254:CDS |
| GAGAGTAGTGGTGGTGTGTG+TGG | 0.551922 | 7.3:-53873361 | MS.gene23254:CDS |
| TTGAGGAGGGTGGAAAGAGG+TGG | 0.552015 | 7.3:+53874045 | None:intergenic |
| TGCCCTCAAGTAGTCTCACT+TGG | 0.552797 | 7.3:-53873607 | MS.gene23254:CDS |
| GGCAGTGCAAGTAGACATGT+AGG | 0.553764 | 7.3:+53873774 | None:intergenic |
| TTATGTATGGGTTGAATAGT+GGG | 0.557969 | 7.3:+53873905 | None:intergenic |
| CACACTGGTGTTGAGGCTGT+TGG | 0.558660 | 7.3:+53873991 | None:intergenic |
| TCAAGTCCCCGTTGCCGTCG+AGG | 0.567153 | 7.3:+53873533 | None:intergenic |
| GTCTATGCCAAAGTTTGGTG+AGG | 0.568396 | 7.3:+53873744 | None:intergenic |
| GGGTGGTGTGAGTATGAGAG+TGG | 0.568455 | 7.3:+53873795 | None:intergenic |
| GGAAGTGGTGTATGAAATGG+AGG | 0.572115 | 7.3:+53873816 | None:intergenic |
| GTGTGTGGATACGCTCCTCC+AGG | 0.572268 | 7.3:-53873346 | MS.gene23254:CDS |
| ACCCAATGAGTAGGATCGGT+AGG | 0.577418 | 7.3:+53873454 | None:intergenic |
| CTGTTGGTGGAGATGCTAAG+AGG | 0.583151 | 7.3:+53874007 | None:intergenic |
| GTAATTAGAGCAATCAAGGC+TGG | 0.584195 | 7.3:+53873285 | None:intergenic |
| AGAGAGGAGGATGAAAGTGG+AGG | 0.585943 | 7.3:+53873696 | None:intergenic |
| TGATTGTAGTAGTTATACTT+CGG | 0.586867 | 7.3:-53873497 | MS.gene23254:CDS |
| GTGGAGGAAGATATTTGGAA+TGG | 0.589220 | 7.3:+53873712 | None:intergenic |
| AAAGTTTGGTGAGGTTTGCA+TGG | 0.589595 | 7.3:+53873753 | None:intergenic |
| TACTCACCGGGGAACCTCGA+CGG | 0.589903 | 7.3:-53873547 | MS.gene23254:CDS |
| GTCATGGCACACTGGTGTTG+AGG | 0.591700 | 7.3:+53873984 | None:intergenic |
| TTGATGTGCATGTTATGTAT+GGG | 0.591875 | 7.3:+53873893 | None:intergenic |
| TACCAAGTGAGACTACTTGA+GGG | 0.596440 | 7.3:+53873605 | None:intergenic |
| ATACCAAGTGAGACTACTTG+AGG | 0.598463 | 7.3:+53873604 | None:intergenic |
| GAGGAGATACAGAGTCCCAA+AGG | 0.600882 | 7.3:+53873245 | None:intergenic |
| GATCATGAAGAAGTTGAGGA+GGG | 0.601845 | 7.3:+53874032 | None:intergenic |
| ACAAACCCAATGAGTAGGAT+CGG | 0.610699 | 7.3:+53873450 | None:intergenic |
| CCCAATGAGTAGGATCGGTA+GGG | 0.618650 | 7.3:+53873455 | None:intergenic |
| ACGCCACAAACCCAATGAGT+AGG | 0.632533 | 7.3:+53873445 | None:intergenic |
| CCACATGTGTCATGGCACAC+TGG | 0.636762 | 7.3:+53873976 | None:intergenic |
| GCAGTGCAAGTAGACATGTA+GGG | 0.645279 | 7.3:+53873775 | None:intergenic |
| AAGAGTAAAGAGAAGCACAA+AGG | 0.652408 | 7.3:+53873629 | None:intergenic |
| GTATTGAGCCACATGTGTCA+TGG | 0.676021 | 7.3:+53873968 | None:intergenic |
| TATGTATGGGTTGAATAGTG+GGG | 0.690061 | 7.3:+53873906 | None:intergenic |
| GTGGCATTGAAATATAGTCA+TGG | 0.693317 | 7.3:-53873424 | MS.gene23254:CDS |
| TTGGTGGAGATGCTAAGAGG+AGG | 0.695965 | 7.3:+53874010 | None:intergenic |
| ACTAGTTGTGAGAGTAGTGG+TGG | 0.700797 | 7.3:-53873370 | MS.gene23254:CDS |
| TGTACTAGTTGTGAGAGTAG+TGG | 0.707622 | 7.3:-53873373 | MS.gene23254:CDS |
| GGGGAACCTCGACGGCAACG+GGG | 0.708881 | 7.3:-53873539 | MS.gene23254:CDS |
| GTGCAAGTAGACATGTAGGG+TGG | 0.711373 | 7.3:+53873778 | None:intergenic |
| CATGTTGTGTATACTCACCG+GGG | 0.745636 | 7.3:-53873558 | MS.gene23254:CDS |
| CCAGTGTGCCATGACACATG+TGG | 0.747102 | 7.3:-53873976 | MS.gene23254:CDS |
| CAAACAAATCCACTTCCTGG+AGG | 0.785898 | 7.3:+53873331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATTTTCATATATCATAT+AGG | - | chr7.3:53873701-53873720 | MS.gene23254:CDS | 15.0% |
| !!! | TTTGTTGTTTCTTTTATTAT+TGG | - | chr7.3:53873303-53873322 | MS.gene23254:CDS | 15.0% |
| !! | AAAAAGGAAAAATAAATGGT+TGG | - | chr7.3:53873818-53873837 | MS.gene23254:CDS | 20.0% |
| !! | CAAGAAAAAGGAAAAATAAA+TGG | - | chr7.3:53873814-53873833 | MS.gene23254:CDS | 20.0% |
| !! | GAGTATGTATAAGTAATTAA+GGG | - | chr7.3:53873723-53873742 | MS.gene23254:CDS | 20.0% |
| ! | AAAAATAAATGGTTGGACAT+TGG | - | chr7.3:53873825-53873844 | MS.gene23254:CDS | 25.0% |
| ! | AAAGAAACAACAAAAAGAGA+AGG | + | chr7.3:53873297-53873316 | None:intergenic | 25.0% |
| ! | ATAATAGTTACCCATTACTT+TGG | + | chr7.3:53873901-53873920 | None:intergenic | 25.0% |
| ! | GGAGTATGTATAAGTAATTA+AGG | - | chr7.3:53873722-53873741 | MS.gene23254:CDS | 25.0% |
| ! | TATTATTCTGTACACTTGAA+AGG | - | chr7.3:53873915-53873934 | MS.gene23254:CDS | 25.0% |
| ! | TGATTGTAGTAGTTATACTT+CGG | - | chr7.3:53872994-53873013 | MS.gene23254:intron | 25.0% |
| ! | TGCAACATAAAGTAAACTTA+GGG | - | chr7.3:53873536-53873555 | MS.gene23254:CDS | 25.0% |
| ! | TTGCAACATAAAGTAAACTT+AGG | - | chr7.3:53873535-53873554 | MS.gene23254:CDS | 25.0% |
| !! | ATTTTCTGAGTACAAGAAAA+AGG | - | chr7.3:53873802-53873821 | MS.gene23254:CDS | 25.0% |
| !! | GTTTCAAAAAGTTGTGATTT+TGG | - | chr7.3:53873351-53873370 | MS.gene23254:CDS | 25.0% |
| !! | TAAAGGCTTAATTACACTTT+TGG | + | chr7.3:53873623-53873642 | None:intergenic | 25.0% |
| !!! | AAATGGTTGAACTTTTTTCT+TGG | + | chr7.3:53872823-53872842 | None:intergenic | 25.0% |
| !!! | ACAACTTTTTGAAACTTAAG+GGG | + | chr7.3:53873346-53873365 | None:intergenic | 25.0% |
| !!! | ATGAGAATGTTTGAGTTTTA+AGG | + | chr7.3:53872646-53872665 | None:intergenic | 25.0% |
| !!! | CACAACTTTTTGAAACTTAA+GGG | + | chr7.3:53873347-53873366 | None:intergenic | 25.0% |
| !!! | GAAAGAGTTGTTTTTTTTAG+GGG | - | chr7.3:53873565-53873584 | MS.gene23254:CDS | 25.0% |
| !!! | GGAAAGAGTTGTTTTTTTTA+GGG | - | chr7.3:53873564-53873583 | MS.gene23254:CDS | 25.0% |
| !!! | TACTTTTTGACTCGAAATTA+GGG | - | chr7.3:53873463-53873482 | MS.gene23254:CDS | 25.0% |
| !!! | TCACAACTTTTTGAAACTTA+AGG | + | chr7.3:53873348-53873367 | None:intergenic | 25.0% |
| !!! | TGGAAAGAGTTGTTTTTTTA+GGG | + | chr7.3:53873379-53873398 | None:intergenic | 25.0% |
| !!! | TGGAAAGAGTTGTTTTTTTT+AGG | - | chr7.3:53873563-53873582 | MS.gene23254:CDS | 25.0% |
| !!! | TTACTTTTTGACTCGAAATT+AGG | - | chr7.3:53873462-53873481 | MS.gene23254:CDS | 25.0% |
| !!! | TTGGAAAGAGTTGTTTTTTT+AGG | + | chr7.3:53873581-53873562 | None:intergenic | 25.0% |
| !!! | TTTATATTGATTCTCTCTCT+TGG | - | chr7.3:53873961-53873980 | MS.gene23254:CDS | 25.0% |
| AAAAAAGACCCGAAAACTAT+GGG | + | chr7.3:53873683-53873702 | None:intergenic | 30.0% | |
| AAAAACGTACTGTTGTACAT+GGG | + | chr7.3:53873274-53873293 | None:intergenic | 30.0% | |
| AAACCAATATGCCAAAGTAA+TGG | - | chr7.3:53873887-53873906 | MS.gene23254:CDS | 30.0% | |
| AACCAATATGCCAAAGTAAT+GGG | - | chr7.3:53873888-53873907 | MS.gene23254:CDS | 30.0% | |
| AGTCAAAAAGTAAACTTAGG+GGG | + | chr7.3:53873455-53873474 | None:intergenic | 30.0% | |
| CAACATAAAGTAAACTTAGG+GGG | - | chr7.3:53873538-53873557 | MS.gene23254:CDS | 30.0% | |
| CGAGTCAAAAAGTAAACTTA+GGG | + | chr7.3:53873457-53873476 | None:intergenic | 30.0% | |
| GAAAGTAAACTTAGGAGATT+TGG | + | chr7.3:53873399-53873418 | None:intergenic | 30.0% | |
| GAGTCAAAAAGTAAACTTAG+GGG | + | chr7.3:53873456-53873475 | None:intergenic | 30.0% | |
| GCAACATAAAGTAAACTTAG+GGG | - | chr7.3:53873537-53873556 | MS.gene23254:CDS | 30.0% | |
| TACATAACATGCACATCAAA+CGG | - | chr7.3:53872602-53872621 | MS.gene23254:intron | 30.0% | |
| TATACACAACATGTGTTAGT+AGG | + | chr7.3:53872926-53872945 | None:intergenic | 30.0% | |
| TCGAGTCAAAAAGTAAACTT+AGG | + | chr7.3:53873458-53873477 | None:intergenic | 30.0% | |
| TGTATGAAATGGAGGTTATA+GGG | + | chr7.3:53872670-53872689 | None:intergenic | 30.0% | |
| TTGATGTGCATGTTATGTAT+GGG | + | chr7.3:53872601-53872620 | None:intergenic | 30.0% | |
| TTGCAACAGAAAGTAAACTT+AGG | + | chr7.3:53873407-53873426 | None:intergenic | 30.0% | |
| TTTGATGTGCATGTTATGTA+TGG | + | chr7.3:53872602-53872621 | None:intergenic | 30.0% | |
| TTTGTTTGTGTTTGTAAAGG+TGG | - | chr7.3:53873175-53873194 | MS.gene23254:intron | 30.0% | |
| ! | ATACAAGTCAAGTATCCTTT+TGG | - | chr7.3:53872542-53872561 | MS.gene23254:intron | 30.0% |
| ! | ATCACAACTTTGGGAAATTT+AGG | - | chr7.3:53873594-53873613 | MS.gene23254:CDS | 30.0% |
| ! | ATTTCCCAAAGTTGTGATTT+TGG | + | chr7.3:53873592-53873611 | None:intergenic | 30.0% |
| ! | GGATTTGTTTGTGTTTGTAA+AGG | - | chr7.3:53873172-53873191 | MS.gene23254:intron | 30.0% |
| ! | TCACAACTTTGGGAAATTTA+GGG | - | chr7.3:53873595-53873614 | MS.gene23254:CDS | 30.0% |
| ! | TTATGTATGGGTTGAATAGT+GGG | + | chr7.3:53872589-53872608 | None:intergenic | 30.0% |
| ! | TTGAAATTCCCCATAGTTTT+CGG | - | chr7.3:53873671-53873690 | MS.gene23254:CDS | 30.0% |
| !! | ACTTTTTGACTCGAAATTAG+GGG | - | chr7.3:53873464-53873483 | MS.gene23254:CDS | 30.0% |
| !! | ATCAAAAGAAGTGTCACAAA+TGG | + | chr7.3:53872840-53872859 | None:intergenic | 30.0% |
| !!! | GAAAGAGTTGTTTTTTTAGG+GGG | + | chr7.3:53873377-53873396 | None:intergenic | 30.0% |
| !!! | GGAAAGAGTTGTTTTTTTAG+GGG | + | chr7.3:53873378-53873397 | None:intergenic | 30.0% |
| !!! | TTTGAGTTTTAAGGATGAGT+TGG | + | chr7.3:53872637-53872656 | None:intergenic | 30.0% |
| AAAAAGACCCGAAAACTATG+GGG | + | chr7.3:53873682-53873701 | None:intergenic | 35.0% | |
| ATCAAAACCAGGATTTCCTT+TGG | - | chr7.3:53873230-53873249 | MS.gene23254:intron | 35.0% | |
| CTCACAACTAGTACATTTAG+TGG | + | chr7.3:53873113-53873132 | None:intergenic | 35.0% | |
| CTCTAATTACGATCAAAACC+AGG | - | chr7.3:53873219-53873238 | MS.gene23254:intron | 35.0% | |
| CTGTTCTGTTATGAACAGTT+GGG | - | chr7.3:53874023-53874042 | MS.gene23254:CDS | 35.0% | |
| GAAAAAAGACCCGAAAACTA+TGG | + | chr7.3:53873684-53873703 | None:intergenic | 35.0% | |
| GAAAAACGTACTGTTGTACA+TGG | + | chr7.3:53873275-53873294 | None:intergenic | 35.0% | |
| GATCGTAATTAGAGCAATCA+AGG | + | chr7.3:53873213-53873232 | None:intergenic | 35.0% | |
| GTGTATGAAATGGAGGTTAT+AGG | + | chr7.3:53872671-53872690 | None:intergenic | 35.0% | |
| GTGTTAGTAGGAGAAAAAAG+AGG | + | chr7.3:53872914-53872933 | None:intergenic | 35.0% | |
| GTTAAGTCTATGCCAAAGTT+TGG | + | chr7.3:53872755-53872774 | None:intergenic | 35.0% | |
| TACCCATTACTTTGGCATAT+TGG | + | chr7.3:53873893-53873912 | None:intergenic | 35.0% | |
| TCAAAACCAGGATTTCCTTT+GGG | - | chr7.3:53873231-53873250 | MS.gene23254:intron | 35.0% | |
| TGAAAGTGGAGGAAGATATT+TGG | + | chr7.3:53872787-53872806 | None:intergenic | 35.0% | |
| ! | AAGAGTAAAGAGAAGCACAA+AGG | + | chr7.3:53872865-53872884 | None:intergenic | 35.0% |
| ! | ACAACTTTGGGAAATTTAGG+GGG | - | chr7.3:53873597-53873616 | MS.gene23254:CDS | 35.0% |
| ! | CACAACTTTGGGAAATTTAG+GGG | - | chr7.3:53873596-53873615 | MS.gene23254:CDS | 35.0% |
| ! | GTGGCATTGAAATATAGTCA+TGG | - | chr7.3:53873067-53873086 | MS.gene23254:intron | 35.0% |
| ! | GTTATGTATGGGTTGAATAG+TGG | + | chr7.3:53872590-53872609 | None:intergenic | 35.0% |
| ! | TATGTATGGGTTGAATAGTG+GGG | + | chr7.3:53872588-53872607 | None:intergenic | 35.0% |
| ! | TGAAATTCCCCATAGTTTTC+GGG | - | chr7.3:53873672-53873691 | MS.gene23254:CDS | 35.0% |
| !! | CTTTTTGACTCGAAATTAGG+GGG | - | chr7.3:53873465-53873484 | MS.gene23254:CDS | 35.0% |
| !!! | AACTTTTTTCTTGGCAAGAG+AGG | + | chr7.3:53872814-53872833 | None:intergenic | 35.0% |
| ACAAACCCAATGAGTAGGAT+CGG | + | chr7.3:53873044-53873063 | None:intergenic | 40.0% | |
| ACACAAACAAATCCACTTCC+TGG | + | chr7.3:53873166-53873185 | None:intergenic | 40.0% | |
| ACATGTTGTGTATACTCACC+GGG | - | chr7.3:53872932-53872951 | MS.gene23254:intron | 40.0% | |
| AGTGGAAGTGGTGTATGAAA+TGG | + | chr7.3:53872681-53872700 | None:intergenic | 40.0% | |
| ATACCAAGTGAGACTACTTG+AGG | + | chr7.3:53872890-53872909 | None:intergenic | 40.0% | |
| ATGCAAACCTCACCAAACTT+TGG | - | chr7.3:53872740-53872759 | MS.gene23254:intron | 40.0% | |
| CACATGTTGTGTATACTCAC+CGG | - | chr7.3:53872931-53872950 | MS.gene23254:intron | 40.0% | |
| CCAACTGTTCATAACAGAAC+AGG | + | chr7.3:53874025-53874044 | None:intergenic | 40.0% | |
| CCTGTTCTGTTATGAACAGT+TGG | - | chr7.3:53874022-53874041 | MS.gene23254:CDS | 40.0% | |
| GAAAATGATACCAGCCAAGA+TGG | + | chr7.3:53874062-53874081 | None:intergenic | 40.0% | |
| GATCATGAAGAAGTTGAGGA+GGG | + | chr7.3:53872462-53872481 | None:intergenic | 40.0% | |
| GGGACCAAAATCACAACTTT+GGG | - | chr7.3:53873585-53873604 | MS.gene23254:CDS | 40.0% | |
| GTAATTAGAGCAATCAAGGC+TGG | + | chr7.3:53873209-53873228 | None:intergenic | 40.0% | |
| GTGGAGGAAGATATTTGGAA+TGG | + | chr7.3:53872782-53872801 | None:intergenic | 40.0% | |
| TAAAGTAAACTTAGGGGGCT+TGG | - | chr7.3:53873543-53873562 | MS.gene23254:CDS | 40.0% | |
| TACCAAGTGAGACTACTTGA+GGG | + | chr7.3:53872889-53872908 | None:intergenic | 40.0% | |
| TATGAACAGTTGGGAATGTC+TGG | - | chr7.3:53874032-53874051 | MS.gene23254:CDS | 40.0% | |
| TGTACTAGTTGTGAGAGTAG+TGG | - | chr7.3:53873118-53873137 | MS.gene23254:intron | 40.0% | |
| ! | AAAGTTTGGTGAGGTTTGCA+TGG | + | chr7.3:53872741-53872760 | None:intergenic | 40.0% |
| !!! | TTTTTTCTTGGCAAGAGAGG+AGG | + | chr7.3:53872811-53872830 | None:intergenic | 40.0% |
| AACGTACTGTTGTACATGGG+AGG | + | chr7.3:53873271-53873290 | None:intergenic | 45.0% | |
| ACTAGTTGTGAGAGTAGTGG+TGG | - | chr7.3:53873121-53873140 | MS.gene23254:intron | 45.0% | |
| CAAACAAATCCACTTCCTGG+AGG | + | chr7.3:53873163-53873182 | None:intergenic | 45.0% | |
| CATGTTGTGTATACTCACCG+GGG | - | chr7.3:53872933-53872952 | MS.gene23254:intron | 45.0% | |
| GAAAGAGGTGGTAGTAGTAG+TGG | + | chr7.3:53872437-53872456 | None:intergenic | 45.0% | |
| GATCCTACTCATTGGGTTTG+TGG | - | chr7.3:53873043-53873062 | MS.gene23254:intron | 45.0% | |
| GCAGTGCAAGTAGACATGTA+GGG | + | chr7.3:53872719-53872738 | None:intergenic | 45.0% | |
| GCCTGCAAAGTAAACTTAGG+GGG | - | chr7.3:53873487-53873506 | MS.gene23254:CDS | 45.0% | |
| GGAAGTGGTGTATGAAATGG+AGG | + | chr7.3:53872678-53872697 | None:intergenic | 45.0% | |
| GGAGGATCATGAAGAAGTTG+AGG | + | chr7.3:53872466-53872485 | None:intergenic | 45.0% | |
| GGATCATGAAGAAGTTGAGG+AGG | + | chr7.3:53872463-53872482 | None:intergenic | 45.0% | |
| GGCCTGCAAAGTAAACTTAG+GGG | - | chr7.3:53873486-53873505 | MS.gene23254:CDS | 45.0% | |
| GGGCCTGCAAAGTAAACTTA+GGG | - | chr7.3:53873485-53873504 | MS.gene23254:CDS | 45.0% | |
| GGGGACCAAAATCACAACTT+TGG | - | chr7.3:53873584-53873603 | MS.gene23254:CDS | 45.0% | |
| GTATTGAGCCACATGTGTCA+TGG | + | chr7.3:53872526-53872545 | None:intergenic | 45.0% | |
| TGTGAGTATGAGAGTGGAAG+TGG | + | chr7.3:53872693-53872712 | None:intergenic | 45.0% | |
| ! | GAATGTCTGGAGTTCCATCT+TGG | - | chr7.3:53874045-53874064 | MS.gene23254:CDS | 45.0% |
| ! | GTCAAGTATCCTTTTGGCAC+AGG | - | chr7.3:53872548-53872567 | MS.gene23254:intron | 45.0% |
| ! | GTCTATGCCAAAGTTTGGTG+AGG | + | chr7.3:53872750-53872769 | None:intergenic | 45.0% |
| !! | GTTGCAATTTTAGCCCCTCA+TGG | - | chr7.3:53873420-53873439 | MS.gene23254:CDS | 45.0% |
| !! | GTTGCAATTTTAGCCCCTCA+TGG | + | chr7.3:53873439-53873420 | None:intergenic | 45.0% |
| !! | TAATTTATTCAAAATAATAA+AGG | + | chr7.3:53873640-53873659 | None:intergenic | 5.0% |
| AAGTTGAGGAGGGTGGAAAG+AGG | + | chr7.3:53872452-53872471 | None:intergenic | 50.0% | |
| ACCCAATGAGTAGGATCGGT+AGG | + | chr7.3:53873040-53873059 | None:intergenic | 50.0% | |
| ACCCTACCGATCCTACTCAT+TGG | - | chr7.3:53873035-53873054 | MS.gene23254:intron | 50.0% | |
| ACGCCACAAACCCAATGAGT+AGG | + | chr7.3:53873049-53873068 | None:intergenic | 50.0% | |
| AGAGAGGAGGATGAAAGTGG+AGG | + | chr7.3:53872798-53872817 | None:intergenic | 50.0% | |
| AGGGGGCTAAAATTGCCATG+AGG | - | chr7.3:53873504-53873523 | MS.gene23254:CDS | 50.0% | |
| AGGGGGCTAAAATTGCCATG+AGG | + | chr7.3:53873523-53873504 | None:intergenic | 50.0% | |
| CAGAGTCCCAAAGGAAATCC+TGG | + | chr7.3:53873240-53873259 | None:intergenic | 50.0% | |
| CATGAAGAAGTTGAGGAGGG+TGG | + | chr7.3:53872459-53872478 | None:intergenic | 50.0% | |
| CCCAATGAGTAGGATCGGTA+GGG | + | chr7.3:53873039-53873058 | None:intergenic | 50.0% | |
| CCCTACCGATCCTACTCATT+GGG | - | chr7.3:53873036-53873055 | MS.gene23254:intron | 50.0% | |
| GAGGAGATACAGAGTCCCAA+AGG | + | chr7.3:53873249-53873268 | None:intergenic | 50.0% | |
| GCAAGAGAGGAGGATGAAAG+TGG | + | chr7.3:53872801-53872820 | None:intergenic | 50.0% | |
| GCCCCCTAAGTTTACTTTGC+AGG | + | chr7.3:53873491-53873510 | None:intergenic | 50.0% | |
| GGCAGTGCAAGTAGACATGT+AGG | + | chr7.3:53872720-53872739 | None:intergenic | 50.0% | |
| GGGGCCTGCAAAGTAAACTT+AGG | - | chr7.3:53873484-53873503 | MS.gene23254:CDS | 50.0% | |
| GGGGCTAAAATTGCCATGAG+GGG | - | chr7.3:53873506-53873525 | MS.gene23254:CDS | 50.0% | |
| GGGGCTAAAATTGCCATGAG+GGG | + | chr7.3:53873525-53873506 | None:intergenic | 50.0% | |
| GGGGGCTAAAATTGCCATGA+GGG | - | chr7.3:53873505-53873524 | MS.gene23254:CDS | 50.0% | |
| GGGGGCTAAAATTGCCATGA+GGG | + | chr7.3:53873524-53873505 | None:intergenic | 50.0% | |
| GTACTGTTGTACATGGGAGG+AGG | + | chr7.3:53873268-53873287 | None:intergenic | 50.0% | |
| GTGCAAGTAGACATGTAGGG+TGG | + | chr7.3:53872716-53872735 | None:intergenic | 50.0% | |
| TACTCATTGGGTTTGTGGCG+TGG | - | chr7.3:53873048-53873067 | MS.gene23254:intron | 50.0% | |
| TGCCCTCAAGTAGTCTCACT+TGG | - | chr7.3:53872884-53872903 | MS.gene23254:intron | 50.0% | |
| TTGGTGGAGATGCTAAGAGG+AGG | + | chr7.3:53872484-53872503 | None:intergenic | 50.0% | |
| ! | CTGTTGGTGGAGATGCTAAG+AGG | + | chr7.3:53872487-53872506 | None:intergenic | 50.0% |
| ! | TATCCTTTTGGCACAGGTCC+TGG | - | chr7.3:53872554-53872573 | MS.gene23254:intron | 50.0% |
| CAACCAGGACCTGTGCCAAA+AGG | + | chr7.3:53872560-53872579 | None:intergenic | 55.0% | |
| CCACATGTGTCATGGCACAC+TGG | + | chr7.3:53872518-53872537 | None:intergenic | 55.0% | |
| CCAGTGTGCCATGACACATG+TGG | - | chr7.3:53872515-53872534 | MS.gene23254:intron | 55.0% | |
| GGGTGGTGTGAGTATGAGAG+TGG | + | chr7.3:53872699-53872718 | None:intergenic | 55.0% | |
| TTGAGGAGGGTGGAAAGAGG+TGG | + | chr7.3:53872449-53872468 | None:intergenic | 55.0% | |
| TTTGGCACAGGTCCTGGTTG+CGG | - | chr7.3:53872560-53872579 | MS.gene23254:intron | 55.0% | |
| ! | AATAGTGGGGATCCGCAACC+AGG | + | chr7.3:53872575-53872594 | None:intergenic | 55.0% |
| ! | ACTGGTGTTGAGGCTGTTGG+TGG | + | chr7.3:53872500-53872519 | None:intergenic | 55.0% |
| ! | CACACTGGTGTTGAGGCTGT+TGG | + | chr7.3:53872503-53872522 | None:intergenic | 55.0% |
| ! | GAGAGTAGTGGTGGTGTGTG+TGG | - | chr7.3:53873130-53873149 | MS.gene23254:intron | 55.0% |
| ! | GTCATGGCACACTGGTGTTG+AGG | + | chr7.3:53872510-53872529 | None:intergenic | 55.0% |
| ! | GTCTGGAGTTCCATCTTGGC+TGG | - | chr7.3:53874049-53874068 | MS.gene23254:CDS | 55.0% |
| GGATACGCTCCTCCAGGAAG+TGG | - | chr7.3:53873151-53873170 | MS.gene23254:intron | 60.0% | |
| GTGTGTGGATACGCTCCTCC+AGG | - | chr7.3:53873145-53873164 | MS.gene23254:intron | 60.0% | |
| TACTCACCGGGGAACCTCGA+CGG | - | chr7.3:53872944-53872963 | MS.gene23254:intron | 60.0% | |
| TCAAGTCCCCGTTGCCGTCG+AGG | + | chr7.3:53872961-53872980 | None:intergenic | 65.0% | |
| CCGGGGAACCTCGACGGCAA+CGG | - | chr7.3:53872950-53872969 | MS.gene23254:intron | 70.0% | |
| CCGTTGCCGTCGAGGTTCCC+CGG | + | chr7.3:53872953-53872972 | None:intergenic | 70.0% | |
| CGGGGAACCTCGACGGCAAC+GGG | - | chr7.3:53872951-53872970 | MS.gene23254:intron | 70.0% | |
| GGGGAACCTCGACGGCAACG+GGG | - | chr7.3:53872952-53872971 | MS.gene23254:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 53872425 | 53874088 | 53872425 | ID=MS.gene23254 |
| chr7.3 | mRNA | 53872425 | 53874088 | 53872425 | ID=MS.gene23254.t1;Parent=MS.gene23254 |
| chr7.3 | exon | 53873255 | 53874088 | 53873255 | ID=MS.gene23254.t1.exon1;Parent=MS.gene23254.t1 |
| chr7.3 | CDS | 53873255 | 53874088 | 53873255 | ID=cds.MS.gene23254.t1;Parent=MS.gene23254.t1 |
| chr7.3 | exon | 53872425 | 53872472 | 53872425 | ID=MS.gene23254.t1.exon2;Parent=MS.gene23254.t1 |
| chr7.3 | CDS | 53872425 | 53872472 | 53872425 | ID=cds.MS.gene23254.t1;Parent=MS.gene23254.t1 |
| Gene Sequence |
| Protein sequence |
