AlfalfaGEDB | MS.gene38381

M. sativa cultivar XinJiangDaYe / MS.gene38381

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006355 GO:0008150 GO:0008270 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043167 GO:0043169 GO:0043565 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00320.30 PF06200.17 PF06203.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38381.t1	XP_003602887.2	95.8	359	14	1	1	358	1	359	9.50E-167	596.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38381.t1	Q10F25	49.3	229	101	5	68	288	80	301	8.5e-47	189.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38381.t1	G7J4K2	95.8	359	14	1	1	358	1	359	6.9e-167	596.3

TFs/TRs:

Gene ID	Type	Classification
MS.gene38381.t1	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene38381	0.822227	2.65E-53	-1.69E-46
MS.gene049254	MS.gene38381	0.830412	2.98E-55	-1.69E-46
MS.gene049404	MS.gene38381	0.832966	6.99E-56	-1.69E-46
MS.gene049435	MS.gene38381	0.843023	1.81E-58	-1.69E-46
MS.gene049452	MS.gene38381	0.815762	7.83E-52	-1.69E-46
MS.gene049669	MS.gene38381	0.808068	3.71E-50	-1.69E-46
MS.gene050105	MS.gene38381	0.800644	1.31E-48	-1.69E-46
MS.gene050442	MS.gene38381	0.864335	1.31E-64	-1.69E-46
MS.gene050605	MS.gene38381	0.849268	3.61E-60	-1.69E-46
MS.gene050680	MS.gene38381	0.842586	2.36E-58	-1.69E-46
MS.gene050750	MS.gene38381	0.842378	2.68E-58	-1.69E-46
MS.gene050759	MS.gene38381	0.806667	7.36E-50	-1.69E-46
MS.gene050953	MS.gene38381	0.836928	7.02E-57	-1.69E-46
MS.gene051147	MS.gene38381	0.813112	3.02E-51	-1.69E-46
MS.gene051198	MS.gene38381	0.835528	1.59E-56	-1.69E-46
MS.gene051368	MS.gene38381	0.835005	2.16E-56	-1.69E-46
MS.gene051800	MS.gene38381	0.823443	1.38E-53	-1.69E-46
MS.gene052190	MS.gene38381	0.831996	1.22E-55	-1.69E-46
MS.gene052208	MS.gene38381	0.801765	7.71E-49	-1.69E-46
MS.gene052333	MS.gene38381	0.875032	4.24E-68	-1.69E-46
MS.gene052582	MS.gene38381	0.81546	9.14E-52	-1.69E-46
MS.gene052584	MS.gene38381	0.802086	6.63E-49	-1.69E-46
MS.gene052586	MS.gene38381	0.800186	1.62E-48	-1.69E-46
MS.gene052674	MS.gene38381	0.816743	4.73E-52	-1.69E-46
MS.gene052675	MS.gene38381	0.816927	4.30E-52	-1.69E-46
MS.gene052677	MS.gene38381	0.828187	1.03E-54	-1.69E-46
MS.gene052867	MS.gene38381	0.819607	1.06E-52	-1.69E-46
MS.gene053006	MS.gene38381	0.811713	6.10E-51	-1.69E-46
MS.gene053008	MS.gene38381	0.820055	8.39E-53	-1.69E-46
MS.gene053166	MS.gene38381	0.87711	8.17E-69	-1.69E-46
MS.gene053201	MS.gene38381	0.817687	2.90E-52	-1.69E-46
MS.gene053226	MS.gene38381	0.807964	3.91E-50	-1.69E-46
MS.gene053584	MS.gene38381	0.808408	3.14E-50	-1.69E-46
MS.gene053966	MS.gene38381	0.803239	3.83E-49	-1.69E-46
MS.gene054093	MS.gene38381	0.800421	1.45E-48	-1.69E-46
MS.gene05414	MS.gene38381	0.810582	1.07E-50	-1.69E-46
MS.gene05415	MS.gene38381	0.835065	2.08E-56	-1.69E-46
MS.gene054236	MS.gene38381	0.833077	6.56E-56	-1.69E-46
MS.gene054291	MS.gene38381	-0.832662	8.32E-56	-1.69E-46
MS.gene054405	MS.gene38381	0.834287	3.27E-56	-1.69E-46
MS.gene054467	MS.gene38381	0.837234	5.86E-57	-1.69E-46
MS.gene054468	MS.gene38381	0.838635	2.56E-57	-1.69E-46
MS.gene054479	MS.gene38381	0.819976	8.75E-53	-1.69E-46
MS.gene054559	MS.gene38381	0.846038	2.79E-59	-1.69E-46
MS.gene054651	MS.gene38381	0.837292	5.67E-57	-1.69E-46
MS.gene054775	MS.gene38381	0.812624	3.86E-51	-1.69E-46
MS.gene05510	MS.gene38381	0.83665	8.26E-57	-1.69E-46
MS.gene055227	MS.gene38381	0.814918	1.21E-51	-1.69E-46
MS.gene055228	MS.gene38381	0.801686	8.01E-49	-1.69E-46
MS.gene055356	MS.gene38381	0.839862	1.23E-57	-1.69E-46
MS.gene055358	MS.gene38381	0.825278	5.12E-54	-1.69E-46
MS.gene055586	MS.gene38381	0.805194	1.50E-49	-1.69E-46
MS.gene055623	MS.gene38381	0.814199	1.74E-51	-1.69E-46
MS.gene055701	MS.gene38381	0.876607	1.22E-68	-1.69E-46
MS.gene055818	MS.gene38381	0.85237	4.83E-61	-1.69E-46
MS.gene055926	MS.gene38381	0.838853	2.25E-57	-1.69E-46
MS.gene05595	MS.gene38381	0.801719	7.89E-49	-1.69E-46
MS.gene05604	MS.gene38381	0.830531	2.79E-55	-1.69E-46
MS.gene056050	MS.gene38381	0.806958	6.39E-50	-1.69E-46
MS.gene056162	MS.gene38381	0.81887	1.56E-52	-1.69E-46
MS.gene056173	MS.gene38381	0.830038	3.68E-55	-1.69E-46
MS.gene056174	MS.gene38381	0.82855	8.45E-55	-1.69E-46
MS.gene056252	MS.gene38381	0.81567	8.21E-52	-1.69E-46
MS.gene056366	MS.gene38381	0.807022	6.19E-50	-1.69E-46
MS.gene056506	MS.gene38381	0.850848	1.30E-60	-1.69E-46
MS.gene056779	MS.gene38381	0.814899	1.22E-51	-1.69E-46
MS.gene05686	MS.gene38381	0.813393	2.62E-51	-1.69E-46
MS.gene056873	MS.gene38381	0.815977	7.01E-52	-1.69E-46
MS.gene057026	MS.gene38381	0.825074	5.72E-54	-1.69E-46
MS.gene057156	MS.gene38381	-0.830642	2.62E-55	-1.69E-46
MS.gene057200	MS.gene38381	0.812089	5.05E-51	-1.69E-46
MS.gene057208	MS.gene38381	0.811454	6.95E-51	-1.69E-46
MS.gene057444	MS.gene38381	0.829021	6.50E-55	-1.69E-46
MS.gene05761	MS.gene38381	0.811204	7.87E-51	-1.69E-46
MS.gene057693	MS.gene38381	0.813925	2.00E-51	-1.69E-46
MS.gene057855	MS.gene38381	0.810309	1.23E-50	-1.69E-46
MS.gene057869	MS.gene38381	0.82833	9.55E-55	-1.69E-46
MS.gene057915	MS.gene38381	0.800423	1.45E-48	-1.69E-46
MS.gene058010	MS.gene38381	0.823116	1.65E-53	-1.69E-46
MS.gene058146	MS.gene38381	0.811021	8.62E-51	-1.69E-46
MS.gene058548	MS.gene38381	0.806303	8.78E-50	-1.69E-46
MS.gene058625	MS.gene38381	0.829051	6.39E-55	-1.69E-46
MS.gene05868	MS.gene38381	0.823765	1.16E-53	-1.69E-46
MS.gene058979	MS.gene38381	0.851063	1.13E-60	-1.69E-46
MS.gene059128	MS.gene38381	0.816676	4.89E-52	-1.69E-46
MS.gene059161	MS.gene38381	0.861927	7.27E-64	-1.69E-46
MS.gene059162	MS.gene38381	0.80749	4.93E-50	-1.69E-46
MS.gene059306	MS.gene38381	0.813034	3.14E-51	-1.69E-46
MS.gene059382	MS.gene38381	0.801763	7.72E-49	-1.69E-46
MS.gene059550	MS.gene38381	0.807451	5.02E-50	-1.69E-46
MS.gene059607	MS.gene38381	0.82232	2.52E-53	-1.69E-46
MS.gene059609	MS.gene38381	0.83419	3.46E-56	-1.69E-46
MS.gene059842	MS.gene38381	0.806587	7.65E-50	-1.69E-46
MS.gene060011	MS.gene38381	0.854207	1.44E-61	-1.69E-46
MS.gene060137	MS.gene38381	-0.810035	1.41E-50	-1.69E-46
MS.gene060167	MS.gene38381	0.819261	1.27E-52	-1.69E-46
MS.gene060310	MS.gene38381	0.819759	9.81E-53	-1.69E-46
MS.gene060322	MS.gene38381	0.851208	1.03E-60	-1.69E-46
MS.gene06052	MS.gene38381	0.832655	8.35E-56	-1.69E-46
MS.gene060683	MS.gene38381	0.840584	7.96E-58	-1.69E-46
MS.gene060685	MS.gene38381	0.843618	1.25E-58	-1.69E-46
MS.gene060802	MS.gene38381	0.832734	7.98E-56	-1.69E-46
MS.gene060803	MS.gene38381	0.845165	4.81E-59	-1.69E-46
MS.gene060844	MS.gene38381	0.815498	8.96E-52	-1.69E-46
MS.gene060998	MS.gene38381	0.837093	6.37E-57	-1.69E-46
MS.gene061114	MS.gene38381	-0.800528	1.38E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38381.t1	MTR_3g100040	96.657	359	11	1	1	358	1	359	0.0	709
MS.gene38381.t1	MTR_3g100040	96.078	255	10	0	104	358	1	255	0.0	508
MS.gene38381.t1	MTR_4g093730	44.860	321	131	8	54	358	29	319	1.92e-77	241
MS.gene38381.t1	MTR_5g066510	48.000	250	115	7	12	252	14	257	4.27e-62	200
MS.gene38381.t1	MTR_3g100050	52.821	195	78	5	68	258	71	255	1.19e-57	189
MS.gene38381.t1	MTR_3g060200	57.534	146	57	3	162	304	10	153	2.17e-45	158
MS.gene38381.t1	MTR_3g060200	53.614	166	55	3	162	306	10	174	4.04e-44	156
MS.gene38381.t1	MTR_3g060200	53.614	166	55	3	162	306	10	174	5.22e-44	157
MS.gene38381.t1	MTR_3g060200	53.614	166	55	3	162	306	10	174	3.94e-43	157
MS.gene38381.t1	MTR_5g066510	43.655	197	98	6	4	194	10	199	2.01e-34	125
MS.gene38381.t1	MTR_4g008090	50.000	74	37	0	86	159	11	84	1.88e-16	75.1
MS.gene38381.t1	MTR_4g008070	46.914	81	34	3	162	235	1	79	1.04e-14	69.7
MS.gene38381.t1	MTR_3g037390	57.143	49	21	0	122	170	386	434	7.39e-12	66.6
MS.gene38381.t1	MTR_3g037390	57.143	49	21	0	122	170	490	538	1.13e-11	66.2
MS.gene38381.t1	MTR_4g108880	57.143	49	21	0	122	170	497	545	4.63e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene38381.t1	AT3G21175	58.470	183	67	4	68	243	79	259	8.86e-62	200
MS.gene38381.t1	AT3G21175	56.831	183	72	3	68	243	79	261	9.92e-60	194
MS.gene38381.t1	AT1G51600	52.736	201	76	5	68	253	83	279	1.20e-58	192
MS.gene38381.t1	AT1G51600	52.736	201	76	5	68	253	83	279	1.20e-58	192
MS.gene38381.t1	AT4G24470	51.412	177	82	3	68	243	83	256	9.03e-51	172
MS.gene38381.t1	AT4G24470	51.412	177	82	3	68	243	83	256	9.03e-51	172
MS.gene38381.t1	AT4G24470	51.412	177	82	3	68	243	83	256	1.21e-50	172
MS.gene38381.t1	AT3G21175	51.449	138	60	3	68	198	79	216	1.86e-32	121

Find 95 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAAAACTCACAGAGATTC+AGG	0.223095	3.2:+83066342	None:intergenic
CATGCATTGCACAAAGTTCT+TGG	0.241152	3.2:+83066170	None:intergenic
AGTTCAGCTGTGGGCATGCC+TGG	0.281391	3.2:+83069021	None:intergenic
GCTATTCTTCGTGAAAGATT+TGG	0.306955	3.2:+83068861	None:intergenic
GCAGCTGCAGTTGCAGTTGC+AGG	0.307759	3.2:+83071275	None:intergenic
TGCCATTTGATCAGAGTAAC+AGG	0.315044	3.2:-83068999	MS.gene38381:CDS
GATACAGATATTGACATTCC+TGG	0.340740	3.2:-83063891	MS.gene38381:CDS
GCTGGTCCGCGACGCATTGC+AGG	0.357972	3.2:+83066197	None:intergenic
ATTGGTAATTTGTCATTCTT+CGG	0.372377	3.2:-83064223	MS.gene38381:CDS
TCCTGCAATCTCTAGGGCTT+GGG	0.375005	3.2:-83068900	MS.gene38381:intron
ACCAGACGACTTTGCTCAAC+AGG	0.377857	3.2:+83065485	None:intergenic
TGATGATACTATGGATGAAT+TGG	0.387456	3.2:-83071345	MS.gene38381:CDS
ACCTTCTAATCAAAGTTTCC+AGG	0.390784	3.2:+83063873	None:intergenic
TGCTAGGATGCATCGGGAAA+AGG	0.402415	3.2:-83066448	MS.gene38381:intron
TCAATAGCTGGAATTGTTGC+AGG	0.402850	3.2:+83071404	None:intergenic
ACTCACAGAGATTCAGGATT+AGG	0.406041	3.2:+83066348	None:intergenic
ACAGTTGGCTTGACATCAAC+AGG	0.416226	3.2:+83064584	None:intergenic
GCTAGGATGCATCGGGAAAA+GGG	0.419663	3.2:-83066447	MS.gene38381:intron
ACCTTCTGATGTGTGACATC+GGG	0.425377	3.2:+83071194	None:intergenic
GGAACCAGGGCTTTGCTTCA+AGG	0.426853	3.2:+83066413	None:intergenic
TGATGATGGTGATGATACTA+TGG	0.427625	3.2:-83071354	MS.gene38381:CDS
CACAAAGTTCTTGGTCCAGC+TGG	0.446059	3.2:+83066179	None:intergenic
GCAATGCATGCGGCCTCATG+TGG	0.449902	3.2:-83066157	MS.gene38381:CDS
CTCTAGTTGGAATTCAGCAC+AGG	0.449996	3.2:-83066391	MS.gene38381:CDS
GTCAAGCCAACTGTTCTTGA+AGG	0.454609	3.2:-83064575	MS.gene38381:CDS
ATTTCTTGCTAGGATGCATC+GGG	0.457873	3.2:-83066454	MS.gene38381:intron
CTTTCTAATCCTTCAGATGC+AGG	0.461274	3.2:-83063930	MS.gene38381:CDS
GCAATGCGTCGCGGACCAGC+TGG	0.462401	3.2:-83066194	MS.gene38381:CDS
AGCAAAATGACCAACCTTGT+TGG	0.463402	3.2:+83066133	None:intergenic
GGAGGAAGTGGTGCGCAGCC+AGG	0.464266	3.2:-83069039	MS.gene38381:CDS
TCCTGTTGAGCAAAGTCGTC+TGG	0.466212	3.2:-83065486	MS.gene38381:intron
ACCTTCCGCACCAACAGTCT+TGG	0.467444	3.2:+83064421	None:intergenic
ACCCTGTTACTCTGATCAAA+TGG	0.485919	3.2:+83068997	None:intergenic
GAAGAATAGCCTCCTTGGTC+AGG	0.487750	3.2:-83068848	MS.gene38381:CDS
TCCAAGACTGTTGGTGCGGA+AGG	0.498699	3.2:-83064422	MS.gene38381:CDS
AAAGCCCTGGTTCCTCTAGT+TGG	0.498939	3.2:-83066404	MS.gene38381:CDS
TTCACGAAGAATAGCCTCCT+TGG	0.502425	3.2:-83068853	MS.gene38381:CDS
CGGCCTCATGTGGGCCAACA+AGG	0.505964	3.2:-83066147	MS.gene38381:intron
GAACCAGGGCTTTGCTTCAA+GGG	0.507428	3.2:+83066414	None:intergenic
TATTTCTTGCTAGGATGCAT+CGG	0.512222	3.2:-83066455	MS.gene38381:intron
TTCGGAAAATGATGATGAGC+AGG	0.513065	3.2:-83064205	MS.gene38381:intron
TTAGACATTCCTGCATCTGA+AGG	0.515486	3.2:+83063921	None:intergenic
GCTGCAGCTGCAACACGTAT+TGG	0.518862	3.2:-83071257	MS.gene38381:CDS
AATTCCCCTTCAAGAACAGT+TGG	0.521168	3.2:+83064569	None:intergenic
TGGAATTCAGCACAGGGTGC+TGG	0.521463	3.2:-83066384	MS.gene38381:CDS
GGTAATTCAGTGAACGTTGA+AGG	0.522137	3.2:-83071308	MS.gene38381:CDS
TCGTCGTCGTCATCAATAGC+TGG	0.535781	3.2:+83071392	None:intergenic
ATCAAATGGCAGTTCAGCTG+TGG	0.540344	3.2:+83069011	None:intergenic
TACCTTCTGATGTGTGACAT+CGG	0.541157	3.2:+83071193	None:intergenic
GAAGAACCTTCCAAGACTGT+TGG	0.545293	3.2:-83064431	MS.gene38381:CDS
GACACTCAGAGATCTCAGTA+AGG	0.560391	3.2:-83065522	MS.gene38381:CDS
GCACAGGGTGCTGGTCAAGA+TGG	0.560830	3.2:-83066375	MS.gene38381:CDS
GCACCCTTGAAGCAAAGCCC+TGG	0.567134	3.2:-83066417	MS.gene38381:CDS
ACTACAACTACCTCATCACC+AGG	0.568839	3.2:+83064377	None:intergenic
TCAAGCCAACTGTTCTTGAA+GGG	0.572288	3.2:-83064574	MS.gene38381:CDS
TAGATACTCCGTGAGAAAAG+AGG	0.572399	3.2:-83068784	MS.gene38381:CDS
CCCCGATGTCACACATCAGA+AGG	0.572507	3.2:-83071195	MS.gene38381:intron
CTCAGAGATCTCAGTAAGGG+TGG	0.581454	3.2:-83065518	MS.gene38381:CDS
TGCAATCTCTAGGGCTTGGG+CGG	0.583296	3.2:-83068897	MS.gene38381:intron
GAATTGGATGAAGAAACAAA+TGG	0.583383	3.2:-83071329	MS.gene38381:CDS
GCAGGATCCTCAGATGGAAG+AGG	0.588835	3.2:+83071422	None:intergenic
CAACCTTGTTGGCCCACATG+AGG	0.589336	3.2:+83066144	None:intergenic
TGCATCAAACCCTGGTGATG+AGG	0.590145	3.2:-83064387	MS.gene38381:intron
GAATTCCAACTAGAGGAACC+AGG	0.591328	3.2:+83066399	None:intergenic
CAATGCATGCGGCCTCATGT+GGG	0.602828	3.2:-83066156	MS.gene38381:CDS
TCAAATGGCAGTTCAGCTGT+GGG	0.609776	3.2:+83069012	None:intergenic
ATTGTTGCAGGATCCTCAGA+TGG	0.609966	3.2:+83071416	None:intergenic
TGATGACGACGACGACGATG+AGG	0.610620	3.2:-83071384	MS.gene38381:CDS
ATGTCAATATCTGTATCTGA+AGG	0.610986	3.2:+83063897	None:intergenic
TCCGCACCAACAGTCTTGGA+AGG	0.612491	3.2:+83064425	None:intergenic
GGAACAACCTCTTCCATCTG+AGG	0.612918	3.2:-83071429	MS.gene38381:CDS
GAAGAATGACAAATTACCAA+TGG	0.616321	3.2:+83064225	None:intergenic
GGATTAGAAAGCTCGACCAC+GGG	0.617309	3.2:+83063942	None:intergenic
CAAGCCAACTGTTCTTGAAG+GGG	0.619999	3.2:-83064573	MS.gene38381:CDS
ACCTTCCAAGACTGTTGGTG+CGG	0.622461	3.2:-83064426	MS.gene38381:CDS
CTAGGATGCATCGGGAAAAG+GGG	0.623092	3.2:-83066446	MS.gene38381:intron
TGAGAAAAGAGGTGGCAGAA+AGG	0.629475	3.2:-83068773	MS.gene38381:intron
GATGAGGACTATACTGATGA+TGG	0.633851	3.2:-83071368	MS.gene38381:CDS
AGACGTAGATGTCAACATTG+TGG	0.641093	3.2:-83066239	MS.gene38381:CDS
AGGATTAGAAAGCTCGACCA+CGG	0.642905	3.2:+83063941	None:intergenic
AGAACTTTGTGCAATGCATG+CGG	0.654215	3.2:-83066167	MS.gene38381:CDS
CTGTGCTGAATTCCAACTAG+AGG	0.664420	3.2:+83066392	None:intergenic
AATACTCCTGCAATGCGTCG+CGG	0.665782	3.2:-83066203	MS.gene38381:CDS
ACACTCAGAGATCTCAGTAA+GGG	0.666946	3.2:-83065521	MS.gene38381:CDS
TCTAGTTGGAATTCAGCACA+GGG	0.669194	3.2:-83066390	MS.gene38381:CDS
ATACTCCGTGAGAAAAGAGG+TGG	0.671679	3.2:-83068781	MS.gene38381:CDS
AATGATCATGCATCAAACCC+TGG	0.673623	3.2:-83064395	MS.gene38381:CDS
AATTCCAACTAGAGGAACCA+GGG	0.673882	3.2:+83066400	None:intergenic
CCTTCTGATGTGTGACATCG+GGG	0.685593	3.2:+83071195	None:intergenic
ATATGACCTACAGGAACCCG+TGG	0.688581	3.2:-83063958	MS.gene38381:intron
GTTGGCTTGACATCAACAGG+AGG	0.690482	3.2:+83064587	None:intergenic
TTGGCTTGACATCAACAGGA+GGG	0.707354	3.2:+83064588	None:intergenic
GCCATTTGATCAGAGTAACA+GGG	0.709466	3.2:-83068998	MS.gene38381:intron
CTACAACTACCTCATCACCA+GGG	0.715371	3.2:+83064378	None:intergenic
TTCACGGTACCTGACCAAGG+AGG	0.733564	3.2:+83068839	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	83063878	83071456	83063878	ID=MS.gene38381
chr3.2	mRNA	83063878	83071456	83063878	ID=MS.gene38381.t1;Parent=MS.gene38381
chr3.2	exon	83071196	83071456	83071196	ID=MS.gene38381.t1.exon1;Parent=MS.gene38381.t1
chr3.2	CDS	83071196	83071456	83071196	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83068999	83069085	83068999	ID=MS.gene38381.t1.exon2;Parent=MS.gene38381.t1
chr3.2	CDS	83068999	83069085	83068999	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83068774	83068907	83068774	ID=MS.gene38381.t1.exon3;Parent=MS.gene38381.t1
chr3.2	CDS	83068774	83068907	83068774	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83066354	83066464	83066354	ID=MS.gene38381.t1.exon4;Parent=MS.gene38381.t1
chr3.2	CDS	83066354	83066464	83066354	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83066148	83066259	83066148	ID=MS.gene38381.t1.exon5;Parent=MS.gene38381.t1
chr3.2	CDS	83066148	83066259	83066148	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83065487	83065546	83065487	ID=MS.gene38381.t1.exon6;Parent=MS.gene38381.t1
chr3.2	CDS	83065487	83065546	83065487	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83064547	83064612	83064547	ID=MS.gene38381.t1.exon7;Parent=MS.gene38381.t1
chr3.2	CDS	83064547	83064612	83064547	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83064388	83064462	83064388	ID=MS.gene38381.t1.exon8;Parent=MS.gene38381.t1
chr3.2	CDS	83064388	83064462	83064388	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83064206	83064286	83064206	ID=MS.gene38381.t1.exon9;Parent=MS.gene38381.t1
chr3.2	CDS	83064206	83064286	83064206	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1
chr3.2	exon	83063878	83063967	83063878	ID=MS.gene38381.t1.exon10;Parent=MS.gene38381.t1
chr3.2	CDS	83063878	83063967	83063878	ID=cds.MS.gene38381.t1;Parent=MS.gene38381.t1

Gene Sequence

>MS.gene38381

ATGGCGGAACAACCTCTTCCATCTGAGGATCCTGCAACAATTCCAGCTATTGATGACGACGACGACGATGAGGACTATACTGATGATGGTGATGATACTATGGATGAATTGGATGAAGAAACAAATGGTAATTCAGTGAACGTTGAAGGCACTTCAATTCCTGCAACTGCAACTGCAGCTGCAGCTGCAACACGTATTGGTGAACTCACTCTTTCTTTTGAAGGCGAGGTTTATGTCTTCCCCGATGTCACACATCAGAAGGTAATTACTGTTCATCACTTTCAACTATTATTAATCTCAATTGTTGTTCTTATTTTGAATTTTCGTTTTGTTGATACAATAATTCATAACTATACTTTAGTTGAACTTAACACCTATGTTGCATGTATGTATACGGATACAGTATTAAATCAAATTTCAGTTAGTTGACAAATATACATAATCAAGAAAATTATGGTCTAATAAATGTTGTTTATAGACTGAAAATTAGGAAAAGAATATATTCAAATTCAAAAAAGTACCCGCGAGTAATCGATGGGTATCGGGTGCGGGTACGGGTACTGTAACGAGTACGCGTAAGACATGTTTTTTTGGATTTGGAGTACACGTGTTTCAAATCTTAACATATGGGTTGTTATTTATTAGATTGCTGTCGGGATCATGGTGGTTAAAATTCCGATTTGAATCATAAAATCTTATGATTTTGCGACTATACTTGCCCTCAGTGTGATTAAGTGATTGAGAGTACACGTGTAATCTTATTTTCGAAGAATCGGTGGAATCTCGATTTGAATCGTAAAATCTTATGATTTTGCGATTATGCTTGCCCTTAGCGATTAATAGTACACACATCACTATTTTTGTGTCTTAGCGATTATGCTTGTGTTTGTTTCAAAAAAATTCTTCTTCTCCCTCGTCCTTCTTTTGTTTCATTTCCAAATGACTTAAAACTCTCATGCTAATAAATTTAAATTTACATAATTATTTCAAGTGTGATTTAAGGTTTGTATAAGAATTTATATGCATATAATTGAGTTTATGATTTTTGTATAATCTTTCGATTAGCGTAAAATCTCGATTTTACCTACCTTGGTTAGGATTTTGTAACACAATAAAATAAAATGCTTATAAGCGTGGTGATCATCTATTTTATTCATAAACTAAGACGGTGTAATAATGGGACTGTTGTGGTGTAAAGGTTGTAATGTCAAAGGCAGTAATCATCTGCTTGACACGTGAGTTGCTTGCCTATTTTTAAACTGATTATTCTTAAACTCAAAAGGAAAGATATGTAAGACATGTAGCAACTATGAACCAGAAAAGAGTTTTGATGTTTTGTAGAGTTGTAAGGTTTCCATCTCTCTGCATTGAAAATATCACTTCTATAGGCAGACACACGTGCAAGCACTAAACACACACACACACACACACACGTACAAAGTGTCCTGCTTGTATTTTAGACATTATTACTTCAGTCGGCGTGTCCAGGTCCATATCATATCTGGTGTTTGTATCTATGTATGTGCTTCGTAGCTTTCTACTTTAATTGTCTTGCTTGGTAGTATAGGGATTATGGATCTCATTGTCATCAATGGCTGTTTGGATGATAACTACTTGAAGAAGTTGACGTAAAAGCTCTATGGATTTTGGTGGAAGCTTTACACATAATAATTTGGGTTTTGGAAAAAAGAAATATTGATGTCTGGTAAGGCTTACGAACGATATGAATAGGTGAATAGCTCAGGCTTTACATCTTTCGCTTCACACTTATACTCAATTGCGTCCGTCAAACAAGAATATCGTAACTACCCTAATTTCTCTGCATAGTTCATAAACTGTAATTTACAAAAACATAGGAGTACTATTATGTATATTAAGTTTCCATCACATATTCTTTAAGGATTTAAAGTAACCTACTTTTACAGAACTAATATAATTTTAAGCTTATTTAGAGCCCATGATCAAAATCAATATAGTTAGCAAACCTCTGATATTGAAAATTAAGTGACATTTTGTAAGTTATTAGCAAATCTTGGGAACCTTGACACAACGGTCAAAGTATTTGTATGACTTGGAAGTCACAGATTGAAGTCATGGAATCAGACCTCTTGCAATTGCAAAGTAAGGCTGCTTACAATATATCTAAAAATGCGTGGGTCCAACTAATCACAGTTTTCCATTGTAAATTGTTTCAAATTTCTGATCACTAATCACAGATGAATTGAATGGAAGAAATATTTGTAGCATGTGGAACAAAATTGCACTGAAGTCCTGTATTTAAATTTGTAATTTACTTCTTGACCTGGCAAAAGGACAATGATTGAAGGTTTTGCTATTGGGGAATGCTTGCTGATAAAATTTCACATTGCAGGTGCAAGCTGTTTTGCTGTTTTTGGGAGGAAGTGGTGCGCAGCCAGGCATGCCCACAGCTGAACTGCCATTTGATCAGAGTAACAGGGTAAAACATATATTGACTTTAGAAGAACAATTTTATAATTTGTATTGTATTTTTATGCTTGCATTTGTGAATTGGTTCCTGCAATCTCTAGGGCTTGGGCGGTATTGCAAAGATTCCAAATCTTTCACGAAGAATAGCCTCCTTGGTCAGGTACCGTGAAAAACGCAAGGAAAGATGTTTTGACAAGAAAATTAGATACTCCGTGAGAAAAGAGGTGGCAGAAAGGTAAATGAAATTTTGTATTTTACCCTATTACCCCAAAAAGTGATGATTTATTTCTAGATCTACAATTTGTACAGGAGAAATTATCTAAGCTTTTATAAGACGTTTCTCTGTTTTTATAAATAAGTTATTTATGATTTTTATCTTAACCAAGATGTCAACTCCATCAGTATAATATTGGGTAGTTGTGTCTAAATACTATAGCAGATAAGATTGCAATTACAAATACAGAGTTCTGATTTATATCCTTCTTGAGAATATGAGAAAATAAACAAATTTAATAGAGCTTCCGAAAGGAAGTTCGTGGGGACGCACACAGGGTCAGCACTGACCACCTGCTACCTTGTTGGCCCAAAATTATTGTTATAAGTTATATATTGTTAATGCTCATAAATTTTCAAATCTGTCGCTATGGTCCAGTGAACGAATGTAGTTTGTTAGCATGCGTATGCTCCCGTGTTTGATTCCCTCGGGATACTTTTGTTTTTTGCAAAACTTTTTAAAATTATTAATCGTATATATGCTTTTAAAAATTATATTACGATATTAACTTGAAGTTGTATTTTGATGTTATTGATTAGAATATGACTCTTTTATGTTAGTTACGAGGATGGCTACTTTTTATGTTATTTAGAGTTTAAATAGAGGAGGTCTTTCTTTAAAAACTATGTTTTTTTATTAGGGGTCCATTTTTAATATTTGAACAGGGCCTCCAATTTGATTGTGCCCGCCTTGGACACGCAATTTGCTTTAACCCATAAGGAGATCAAGAAAATTAGTCCTTGTTCATTAAAATATCTAGAACTATGCTTTAGTGATTAGTGGTTAAGCTCTAACTACTATGAACCTACTAATAAAAGGGTTTTTGAGACTTAACTGGATAGACCTATTATTCTTGCAAATGGAGAAAATGTTGTTTAACAATTGCCTTGTCTTGTCATAGTAAAAGTTTGTGTTTGTTAGTTTTGAAACTCCACGGTTAACAATTACAGAAATATTTTTCAATACAAAATACTTGTACTCTACAGAGTTTGATCCGCTTCAAGTATAGTATTAAAAATCGCTCTGGTAAAACCAGGAACCGGACACATGGCCGGTCCAATCACAATATTAGGCTGCTCGTGAATTTGACCTGTCAAAGTTTGGTTAAACTCATCAAACTCGTGTAACCCGGCGTAACTGGTGTGGTCAGATTCAGTGAAAACTAGCTAGTGCTTTTATTTTAAAAAAATAATATGCTGAAAGTGGCTTGCACTAGAATCGAATATACGGCAGTACACTACCACAATGCAGTTTTCTGCCACTGAGCCTGCTGCTTGTTGATGTTATCATGTTGCTTTTAATTGATATAGCTGTGTATAGATGTTATTTTCTTTTGGCTTCAACGATATGATTTTTGAACATCAAAATGTAATTAATACTTGCCTTTTTTTATTTATAAATATACATGCCTTTTATAAATACATTCATTGTTAAATTAAAGTCTATAAAATTATTTTTATTGCCATTTTATAAGTGTTTTAAATTTTTAGCGACAAAGTCAGCTGGCTTAATCTGGCTCATACAAATAACAATATTTTATAGAGACCGGGTGATGCAACCGAGTCTTCAAGTTCAATTATGAGGTTAATCCAGTGATCAAGTGGTTCAACCAATGACCAAATACCCTTACCAAGTCAATCACCAACCCGGTTTTTAAAACACTGATAAATTTTCGAATTCTTTTCTTTCTAAACTGCGTAGTATTTATTTACCCAATCAAGTCTTACCACAGGTGAGATTGGCTATATAGATTAATTGAACCGATTAGTCTTTATCAATAACCAAATTTAAAGTAAACTCAATTTTCTTCTCACTTGTCCAAGCAGTCTTACAAAAAGGATAGTATTTTATTATTATTGAAAATTTAAACCCTAAACTTTTTCATGAAGTAGTATAGTTGAGATTTCATCAATATTAACAGCTTCAAATAAATTATAATGTAAGTTGCATCTGGACTCAATTGTCGTATAGATAAGAGGATTCATGTTGGGTCTGAATAGATTTGTTTTATATTGAATTATGACACTATAAAATCTTAGATTTGACTTAATATTGAGTAGAGGCTAATCAGTGAGCAGATTTCTTAGCAACTTAAATAAAGAGTGAGGGACCTAATAATTCATTGTTGTTGATGGTAACTGATTGCATTTTGTTGTATAATATTATTGGCTCCTTTAAAGGTTTTGTCTGATTTTAAGTTATTTTTGAAGTTTATGTGTTCATTTCTACTTATGAATTTGGTTATGTTATTATCTCTTATTTCTTGCTAGGATGCATCGGGAAAAGGGGCAGTTTGCACCCTTGAAGCAAAGCCCTGGTTCCTCTAGTTGGAATTCAGCACAGGGTGCTGGTCAAGATGGCAGTCCTAATCCTGAATCTCTGTGAGTTTTAAACATATTGGTTCTTGTGTGGGTGTGTGTGAGAGAGAGATTTGTGATAATTTTAATCGAAATCTTTATTTTTCTTGTATTCCAGACGTAGATGTCAACATTGTGGAGTCAATGAAAATAATACTCCTGCAATGCGTCGCGGACCAGCTGGACCAAGAACTTTGTGCAATGCATGCGGCCTCATGTGGGCCAACAAGGTTGGTCATTTTGCTAACAAGTATGGTTTTGATGAAATGCTTGGTTCAACTTTTGTACTTCATTTGAAGTACAACAACACAATTATTTTCCAGTAGCTGGAGTTGGCTGCACAAGTCTAATGATATTTTTGTGTTATTCCCAAAAAAACAACACCCAGTCTTTCGGATTTGTCATCTAGATTTGAAGTAAAATAATGAATATCTGATGTGCAGTATTTTTTTTTCTTTTATATCTAAATCATTTGCTATAGATCATCAATAACTTTTGGATTTCTTTCTTCAACTTCTGCTACTCTTCTGTCAAACTCTACTAAATCATTGTCATTCATTATCTTTCATGGTGCCATTTTTATTGTTTACAGCTGAGACAATGGTCCCTGGCATGGGAGCTCCCTGGGGCTTTATAGTTAATCCCCTTACACCCAGTGGTGGATTAGATGTTGTATTTTGACTATAGGACATGTTGTTTTCATCATTTATGTTTCCTTATTACTTTGTATTTCTGATTCCTGTACTTGTTTGTTGCATTCTCAATATCTTTTATTGTGCGCATCTTGCAAATATATTCATCTTTACTAAGTCTGCTTCTTAACTCTGATAGGGGACACTCAGAGATCTCAGTAAGGGTGGAAGAAATCTTCCTGTTGAGCAAAGTCGTCTGGTATGTAAAATGAATCTTTTAATGTTTTCTCAAGATGTATTCCTTTATTAAGCCAATTGCAAATGCTAAGTGGGATCAGCTATGCGTGCCTCCAATTTTAATAACCAGTTTGAAATCAAATGGTTTTGGTAATATATTCATTACAAACTATTGGGTCAACTGTATTTTAAGTTGTTTTTAGACAGGAAAGGAAACATATTATCTTATCAATGGATTAGAGAATAGAAATAAAATTTACTCTGTAAAAAAAAAATCAAACTTATTAGACATAAGAGAGAATAATACAAGTTGGAGTGAGATAAGATAAACATCTTAGATTCTTTAGTCACAGGTCAAGTTATTGACATGCTAACTAATCACAATTCAATCACTTCCTTTTATTAATGAAGTCATAGATCACATGTAAAAATCCCATGAAATAAGGTATCACAGTGAAGGTTACTATTCTGATTTCTGATATGTATTTACGATTTGTATAACAAATATTTTCAAATAATATATTTTTAGCTAGATTAAATGCCTTTTATCAACATTTTCAAATAAACTTTTTTGAAAATGGAACAAATGAACTAATTACCTGTTTATGGTTTTGATTGTCACGAAGAGATGGAAACACTTTACATTGACATGAAAGTAAATTTCCTGTAGTTCTTTGTGGAAGATTTAGTATTAAAACATTGCAGTTAAGTTTAGTAGAAAACTTGGGTTTAAATTATTTCTAACCTTAATATTAAAACAATTTTTTTTCTTTCAAAAAACATTTCAAAACAAACCAGTTTATTTTTGAACAGCCTTACCTTTGTGGCTCAAGTTCTTTCATCAGTTTAATTACACCAGTCCTAAAACACCCTTTCATCTTGAATGAAATTTGCAGGACCCTCCTGTTGATGTCAAGCCAACTGTTCTTGAAGGGGAATTCTCTGTCATTGAAAATGAACAAGTAAAACACTTTCAAATATTACAGATTCATTCTTAGATTTGCAATTGTAGTTCTATTTGCATAAAACTTTTATGGTGTGTTCAGGGTATTTCTGAAGAACCTTCCAAGACTGTTGGTGCGGAAGGTTTGAATGATCATGCATCAAACCCTGGTGATGAGGTAGTTGTAGTAAATCTGTTTTTCTTTTTCTTTATTCTTTTAATTCAATTTGGGGGTTCAGACATCTTTTCTCTGGTATTGACAAATGGGTATTTGTTCAGGAATTGTCTGAATCTGCAGAACACCTAACAAAAACACTGCCATTGGTAATTTGTCATTCTTCGGAAAATGATGATGAGCAGGTATTCTTATTATGCAGCTTGTTTTATAATGTTTATCTAAATGAGTCGAATTCACAGTTCACACAACTATGCTGGTGCTCCATCCGAGTTCAAGTAGCCCCACTTGAACTTTGCCGATGAAACTTGAAATGGAGCTTCCAGTACACTTGTAAACGCAAGAGTTTTGTTGTTAAACTAACATAATTTTCTATAAGATGCATTTGAGTTTCTTCTTACATGAGCCTTATATGACCTACAGGAACCCGTGGTCGAGCTTTCTAATCCTTCAGATGCAGGAATGTCTAATCCTTCAGATACAGATATTGACATTCCTGGAAACTTTGATTAG

Protein sequence

>MS.gene38381.t1

MAEQPLPSEDPATIPAIDDDDDDEDYTDDGDDTMDELDEETNGNSVNVEGTSIPATATAAAAATRIGELTLSFEGEVYVFPDVTHQKVQAVLLFLGGSGAQPGMPTAELPFDQSNRGLGGIAKIPNLSRRIASLVRYREKRKERCFDKKIRYSVRKEVAERMHREKGQFAPLKQSPGSSSWNSAQGAGQDGSPNPESLRRCQHCGVNENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLPVEQSRLDPPVDVKPTVLEGEFSVIENEQGISEEPSKTVGAEGLNDHASNPGDEELSESAEHLTKTLPLVICHSSENDDEQEPVVELSNPSDAGMSNPSDTDIDIPGNFD