Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52872.t1 | XP_013451955.1 | 95.4 | 281 | 12 | 1 | 10 | 289 | 89 | 369 | 3.00E-143 | 518.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52872.t1 | Q94BU1 | 72.2 | 281 | 77 | 1 | 10 | 289 | 80 | 360 | 4.2e-114 | 412.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52872.t1 | A0A072UA79 | 95.4 | 281 | 12 | 1 | 10 | 289 | 89 | 369 | 2.1e-143 | 518.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene52872 | 0.809572 | 1.77E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene52872 | 0.820282 | 7.45E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene52872 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene52872 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene52872 | 0.824916 | 6.23E-54 | -1.69E-46 |
| MS.gene050400 | MS.gene52872 | 0.812434 | 4.25E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene52872 | -0.836411 | 9.51E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene52872 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene52872 | 0.816062 | 6.71E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene52872 | 0.836806 | 7.54E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene52872 | 0.899657 | 1.60E-77 | -1.69E-46 |
| MS.gene050747 | MS.gene52872 | 0.807715 | 4.41E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene52872 | 0.842075 | 3.23E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene52872 | 0.807521 | 4.85E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene52872 | 0.822797 | 1.95E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene52872 | 0.873432 | 1.48E-67 | -1.69E-46 |
| MS.gene051387 | MS.gene52872 | 0.832581 | 8.71E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene52872 | 0.86778 | 1.06E-65 | -1.69E-46 |
| MS.gene051582 | MS.gene52872 | 0.836386 | 9.65E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene52872 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene52872 | 0.812691 | 3.73E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene52872 | -0.853029 | 3.13E-61 | -1.69E-46 |
| MS.gene052134 | MS.gene52872 | 0.821018 | 5.05E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene52872 | 0.82313 | 1.64E-53 | -1.69E-46 |
| MS.gene052136 | MS.gene52872 | 0.817084 | 3.96E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene52872 | 0.878032 | 3.90E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene52872 | 0.843981 | 1.00E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene52872 | 0.84262 | 2.31E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene52872 | 0.843526 | 1.33E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene52872 | 0.828339 | 9.50E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene52872 | 0.854493 | 1.19E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene52872 | 0.835916 | 1.27E-56 | -1.69E-46 |
| MS.gene052469 | MS.gene52872 | 0.831002 | 2.14E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene52872 | 0.807556 | 4.77E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene52872 | 0.801582 | 8.41E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene52872 | 0.848294 | 6.72E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene52872 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene52872 | 0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene52872 | 0.812399 | 4.32E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene52872 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene52872 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene053209 | MS.gene52872 | 0.811962 | 5.38E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene52872 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene52872 | 0.803845 | 2.87E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene52872 | 0.82503 | 5.86E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene52872 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene52872 | 0.822025 | 2.95E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene52872 | 0.847175 | 1.37E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene52872 | 0.846663 | 1.89E-59 | -1.69E-46 |
| MS.gene054719 | MS.gene52872 | 0.844933 | 5.56E-59 | -1.69E-46 |
| MS.gene054884 | MS.gene52872 | -0.812658 | 3.79E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene52872 | 0.825636 | 4.21E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene52872 | 0.86336 | 2.63E-64 | -1.69E-46 |
| MS.gene055289 | MS.gene52872 | 0.814366 | 1.60E-51 | -1.69E-46 |
| MS.gene055369 | MS.gene52872 | 0.863091 | 3.19E-64 | -1.69E-46 |
| MS.gene055539 | MS.gene52872 | 0.871198 | 8.20E-67 | -1.69E-46 |
| MS.gene05553 | MS.gene52872 | 0.850585 | 1.54E-60 | -1.69E-46 |
| MS.gene055741 | MS.gene52872 | 0.846533 | 2.05E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene52872 | 0.851624 | 7.86E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene52872 | 0.808439 | 3.10E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene52872 | 0.815347 | 9.69E-52 | -1.69E-46 |
| MS.gene05602 | MS.gene52872 | 0.807366 | 5.24E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene52872 | 0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene056233 | MS.gene52872 | 0.815345 | 9.69E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene52872 | 0.854454 | 1.22E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene52872 | 0.806939 | 6.45E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene52872 | 0.844159 | 8.99E-59 | -1.69E-46 |
| MS.gene056514 | MS.gene52872 | 0.820189 | 7.82E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene52872 | 0.802877 | 4.55E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene52872 | 0.862508 | 4.82E-64 | -1.69E-46 |
| MS.gene056723 | MS.gene52872 | 0.815286 | 9.99E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene52872 | 0.809612 | 1.74E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene52872 | 0.826145 | 3.19E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene52872 | -0.81333 | 2.70E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene52872 | 0.820282 | 7.45E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene52872 | 0.865385 | 6.13E-65 | -1.69E-46 |
| MS.gene057396 | MS.gene52872 | 0.826787 | 2.24E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene52872 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene057476 | MS.gene52872 | 0.807113 | 5.92E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene52872 | 0.803055 | 4.18E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene52872 | 0.844999 | 5.34E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene52872 | 0.84735 | 1.22E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene52872 | 0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene52872 | 0.817927 | 2.56E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene52872 | 0.848178 | 7.23E-60 | -1.69E-46 |
| MS.gene058082 | MS.gene52872 | 0.803305 | 3.71E-49 | -1.69E-46 |
| MS.gene058090 | MS.gene52872 | 0.807915 | 4.00E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene52872 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene52872 | 0.809449 | 1.88E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene52872 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene52872 | 0.83303 | 6.74E-56 | -1.69E-46 |
| MS.gene058276 | MS.gene52872 | 0.800538 | 1.38E-48 | -1.69E-46 |
| MS.gene058365 | MS.gene52872 | 0.833387 | 5.49E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene52872 | 0.832111 | 1.14E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene52872 | 0.831524 | 1.59E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene52872 | 0.816672 | 4.90E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene52872 | 0.858569 | 7.53E-63 | -1.69E-46 |
| MS.gene058710 | MS.gene52872 | 0.800985 | 1.11E-48 | -1.69E-46 |
| MS.gene05886 | MS.gene52872 | 0.810594 | 1.07E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene52872 | 0.808211 | 3.46E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene52872 | 0.834436 | 3.00E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene52872 | 0.824688 | 7.05E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene52872 | 0.842775 | 2.10E-58 | -1.69E-46 |
| MS.gene059082 | MS.gene52872 | 0.804234 | 2.38E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene52872 | 0.80565 | 1.20E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene52872 | 0.804585 | 2.01E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene52872 | 0.801687 | 8.00E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene52872 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene52872 | 0.870819 | 1.09E-66 | -1.69E-46 |
| MS.gene059676 | MS.gene52872 | 0.827196 | 1.79E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene52872 | 0.853932 | 1.72E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene52872 | 0.842833 | 2.03E-58 | -1.69E-46 |
| MS.gene059695 | MS.gene52872 | 0.844955 | 5.49E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene52872 | 0.802046 | 6.75E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene52872 | 0.802418 | 5.66E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene52872 | 0.820036 | 8.48E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene52872 | 0.819217 | 1.30E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene52872 | 0.806666 | 7.36E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene52872 | 0.839465 | 1.56E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene52872 | 0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene52872 | 0.820385 | 7.06E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene52872 | 0.90255 | 8.65E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52872.t1 | MTR_6g038750 | 95.374 | 281 | 12 | 1 | 10 | 289 | 89 | 369 | 0.0 | 550 |
| MS.gene52872.t1 | MTR_4g026450 | 46.897 | 290 | 142 | 5 | 11 | 289 | 113 | 401 | 3.42e-80 | 258 |
| MS.gene52872.t1 | MTR_0053s0030 | 45.833 | 288 | 144 | 4 | 13 | 289 | 103 | 389 | 3.86e-72 | 236 |
| MS.gene52872.t1 | MTR_1g046620 | 42.807 | 285 | 158 | 3 | 10 | 289 | 144 | 428 | 4.35e-70 | 232 |
| MS.gene52872.t1 | MTR_3g105760 | 41.887 | 265 | 126 | 6 | 45 | 289 | 123 | 379 | 2.84e-59 | 202 |
| MS.gene52872.t1 | MTR_1g009860 | 35.855 | 304 | 178 | 4 | 18 | 305 | 99 | 401 | 1.91e-58 | 198 |
| MS.gene52872.t1 | MTR_1g009860 | 35.855 | 304 | 178 | 4 | 18 | 305 | 99 | 401 | 4.54e-58 | 198 |
| MS.gene52872.t1 | MTR_1g095480 | 39.382 | 259 | 134 | 3 | 53 | 289 | 203 | 460 | 6.98e-51 | 178 |
| MS.gene52872.t1 | MTR_1g095480 | 39.382 | 259 | 134 | 3 | 53 | 289 | 203 | 460 | 4.16e-50 | 178 |
| MS.gene52872.t1 | MTR_3g094740 | 36.296 | 270 | 153 | 4 | 26 | 278 | 176 | 443 | 1.60e-48 | 173 |
| MS.gene52872.t1 | MTR_3g094740 | 37.407 | 270 | 150 | 6 | 26 | 278 | 176 | 443 | 1.88e-48 | 173 |
| MS.gene52872.t1 | MTR_8g091710 | 38.017 | 242 | 135 | 3 | 50 | 278 | 195 | 434 | 3.90e-48 | 172 |
| MS.gene52872.t1 | MTR_3g082750 | 37.450 | 251 | 144 | 3 | 50 | 288 | 201 | 450 | 2.78e-47 | 169 |
| MS.gene52872.t1 | MTR_5g068050 | 31.250 | 256 | 152 | 6 | 53 | 289 | 128 | 378 | 2.96e-30 | 120 |
| MS.gene52872.t1 | MTR_4g104070 | 32.331 | 266 | 154 | 7 | 47 | 289 | 65 | 327 | 8.34e-29 | 115 |
| MS.gene52872.t1 | MTR_1g008980 | 30.588 | 255 | 153 | 8 | 49 | 283 | 50 | 300 | 1.46e-28 | 116 |
| MS.gene52872.t1 | MTR_5g077080 | 28.981 | 314 | 186 | 8 | 30 | 311 | 60 | 368 | 1.28e-27 | 112 |
| MS.gene52872.t1 | MTR_8g464860 | 31.786 | 280 | 167 | 9 | 47 | 303 | 201 | 479 | 3.32e-23 | 100 |
| MS.gene52872.t1 | MTR_4g091510 | 31.707 | 246 | 148 | 6 | 53 | 279 | 221 | 465 | 3.80e-20 | 91.3 |
| MS.gene52872.t1 | MTR_4g091510 | 31.707 | 246 | 148 | 6 | 53 | 279 | 216 | 460 | 4.48e-20 | 91.3 |
| MS.gene52872.t1 | MTR_2g011640 | 31.707 | 246 | 148 | 6 | 53 | 279 | 269 | 513 | 5.43e-20 | 90.9 |
| MS.gene52872.t1 | MTR_3g070410 | 27.823 | 248 | 163 | 7 | 47 | 279 | 83 | 329 | 2.49e-18 | 85.9 |
| MS.gene52872.t1 | MTR_1g085610 | 27.444 | 266 | 177 | 6 | 50 | 303 | 227 | 488 | 5.08e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52872.t1 | AT1G71810 | 72.242 | 281 | 77 | 1 | 10 | 289 | 80 | 360 | 1.09e-148 | 434 |
| MS.gene52872.t1 | AT1G79600 | 47.241 | 290 | 141 | 4 | 11 | 289 | 108 | 396 | 5.26e-80 | 257 |
| MS.gene52872.t1 | AT3G24190 | 43.158 | 285 | 157 | 4 | 10 | 289 | 152 | 436 | 1.73e-69 | 231 |
| MS.gene52872.t1 | AT5G24970 | 42.435 | 271 | 125 | 4 | 49 | 289 | 136 | 405 | 9.69e-63 | 211 |
| MS.gene52872.t1 | AT5G24970 | 42.435 | 271 | 125 | 4 | 49 | 289 | 175 | 444 | 2.24e-62 | 211 |
| MS.gene52872.t1 | AT5G24970 | 42.066 | 271 | 123 | 5 | 49 | 289 | 136 | 402 | 9.57e-60 | 203 |
| MS.gene52872.t1 | AT4G31390 | 39.721 | 287 | 156 | 5 | 19 | 289 | 132 | 417 | 5.11e-59 | 201 |
| MS.gene52872.t1 | AT4G31390 | 38.328 | 287 | 135 | 7 | 19 | 289 | 132 | 392 | 1.21e-52 | 183 |
| MS.gene52872.t1 | AT5G64940 | 38.367 | 245 | 136 | 3 | 47 | 278 | 216 | 458 | 7.95e-49 | 174 |
| MS.gene52872.t1 | AT5G64940 | 38.367 | 245 | 136 | 3 | 47 | 278 | 216 | 458 | 7.95e-49 | 174 |
| MS.gene52872.t1 | AT3G07700 | 38.153 | 249 | 143 | 3 | 50 | 288 | 190 | 437 | 6.86e-48 | 171 |
| MS.gene52872.t1 | AT3G07700 | 38.153 | 249 | 143 | 3 | 50 | 288 | 190 | 437 | 6.86e-48 | 171 |
| MS.gene52872.t1 | AT3G07700 | 38.153 | 249 | 143 | 3 | 50 | 288 | 190 | 437 | 6.86e-48 | 171 |
| MS.gene52872.t1 | AT3G07700 | 38.153 | 249 | 143 | 3 | 50 | 288 | 190 | 437 | 8.50e-48 | 171 |
| MS.gene52872.t1 | AT4G31390 | 42.009 | 219 | 114 | 4 | 83 | 289 | 1 | 218 | 5.21e-47 | 165 |
| MS.gene52872.t1 | AT2G39190 | 34.328 | 268 | 150 | 3 | 47 | 289 | 196 | 462 | 1.08e-41 | 154 |
| MS.gene52872.t1 | AT1G65950 | 28.315 | 279 | 184 | 5 | 36 | 303 | 85 | 358 | 5.36e-30 | 119 |
| MS.gene52872.t1 | AT1G65950 | 28.315 | 279 | 184 | 5 | 36 | 303 | 85 | 358 | 1.50e-29 | 118 |
| MS.gene52872.t1 | AT5G05200 | 29.688 | 256 | 156 | 6 | 53 | 289 | 129 | 379 | 2.86e-29 | 117 |
| MS.gene52872.t1 | AT4G24810 | 29.032 | 279 | 170 | 7 | 37 | 289 | 5 | 281 | 2.70e-27 | 108 |
| MS.gene52872.t1 | AT4G24810 | 29.032 | 279 | 170 | 7 | 37 | 289 | 5 | 281 | 2.99e-27 | 108 |
| MS.gene52872.t1 | AT2G39190 | 38.415 | 164 | 99 | 2 | 47 | 209 | 196 | 358 | 1.15e-26 | 108 |
| MS.gene52872.t1 | AT5G24810 | 29.455 | 275 | 161 | 8 | 28 | 279 | 79 | 343 | 1.77e-26 | 110 |
| MS.gene52872.t1 | AT4G24810 | 29.032 | 279 | 170 | 7 | 37 | 289 | 5 | 281 | 1.85e-26 | 108 |
| MS.gene52872.t1 | AT4G24810 | 29.032 | 279 | 170 | 7 | 37 | 289 | 5 | 281 | 1.85e-26 | 108 |
| MS.gene52872.t1 | AT4G24810 | 29.412 | 289 | 175 | 8 | 28 | 289 | 38 | 324 | 1.89e-26 | 109 |
| MS.gene52872.t1 | AT4G24810 | 28.322 | 286 | 170 | 8 | 37 | 289 | 5 | 288 | 5.23e-24 | 102 |
| MS.gene52872.t1 | AT5G50330 | 29.066 | 289 | 176 | 9 | 28 | 289 | 38 | 324 | 1.62e-23 | 100 |
| MS.gene52872.t1 | AT1G11390 | 30.709 | 254 | 148 | 5 | 53 | 279 | 208 | 460 | 2.81e-22 | 97.8 |
| MS.gene52872.t1 | AT5G24810 | 27.124 | 306 | 159 | 10 | 28 | 279 | 79 | 374 | 1.69e-21 | 95.9 |
| MS.gene52872.t1 | AT1G61640 | 30.159 | 252 | 156 | 6 | 47 | 279 | 207 | 457 | 2.32e-19 | 89.0 |
| MS.gene52872.t1 | AT1G61640 | 30.159 | 252 | 156 | 6 | 47 | 279 | 207 | 457 | 2.52e-19 | 89.0 |
| MS.gene52872.t1 | AT2G40090 | 28.629 | 248 | 162 | 6 | 50 | 283 | 89 | 335 | 4.06e-18 | 85.1 |
| MS.gene52872.t1 | AT5G50330 | 27.336 | 289 | 165 | 10 | 28 | 289 | 38 | 308 | 1.03e-17 | 84.0 |
| MS.gene52872.t1 | AT4G01660 | 28.346 | 254 | 172 | 5 | 45 | 290 | 220 | 471 | 1.33e-15 | 77.8 |
| MS.gene52872.t1 | AT1G61640 | 30.189 | 212 | 137 | 4 | 47 | 248 | 207 | 417 | 3.68e-14 | 73.2 |
Find 78 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGTTGCTGCTGCTTCTCT+TGG | 0.226552 | 6.1:-20670192 | MS.gene52872:CDS |
| GATGGCAAATTAGCTTATTT+AGG | 0.253896 | 6.1:-20666843 | MS.gene52872:intron |
| CAGGTTGCGGTGAAATATTT+TGG | 0.260715 | 6.1:-20666460 | MS.gene52872:CDS |
| TCGAGCTGATGAGATGTTTC+AGG | 0.306292 | 6.1:-20672993 | MS.gene52872:intron |
| AAAATTGAATACTGATCTTC+AGG | 0.330649 | 6.1:-20669907 | MS.gene52872:intron |
| AAAGCAACTTCTGTGGAAAA+TGG | 0.340590 | 6.1:+20670279 | None:intergenic |
| TTGGGAAGTGGTTTGGTTTG+AGG | 0.350357 | 6.1:-20673036 | MS.gene52872:CDS |
| GTTCAAACTGGAATCGCGTT+TGG | 0.350909 | 6.1:-20673055 | MS.gene52872:CDS |
| GCAGAACAGTGTGCATCTTC+AGG | 0.356523 | 6.1:-20666510 | MS.gene52872:intron |
| CACACCCTGGAAATCTTCTT+AGG | 0.378467 | 6.1:-20666872 | MS.gene52872:CDS |
| GATGTCCTAAGAAGATTTCC+AGG | 0.391118 | 6.1:+20666867 | None:intergenic |
| ATCGCGTTTGGGAAGTGGTT+TGG | 0.402365 | 6.1:-20673043 | MS.gene52872:CDS |
| GAATGATAGCGCGTCGGTTG+TGG | 0.409642 | 6.1:-20666488 | MS.gene52872:CDS |
| TGCTGCTGCTTCTCTTGGGC+AGG | 0.409753 | 6.1:-20670187 | MS.gene52872:intron |
| CAAGCAATGGTATCAAGTTC+AGG | 0.411816 | 6.1:-20668132 | MS.gene52872:intron |
| CTGTTGCTGCTGCTTCTCTT+GGG | 0.413397 | 6.1:-20670191 | MS.gene52872:CDS |
| CTGGAATCGCGTTTGGGAAG+TGG | 0.416715 | 6.1:-20673048 | MS.gene52872:CDS |
| CCATTCATCTTCTTAGAGTA+GGG | 0.421316 | 6.1:+20666425 | None:intergenic |
| CCAAGAGAAGCAGCAGCAAC+AGG | 0.422729 | 6.1:+20670192 | None:intergenic |
| CTGTCCTGTTCTGCGAAGCC+TGG | 0.426035 | 6.1:+20670028 | None:intergenic |
| TATGTGGACAGGAACTTATA+TGG | 0.429530 | 6.1:-20667543 | MS.gene52872:intron |
| GCGAGGAGATTGGTTCAAAC+TGG | 0.435394 | 6.1:-20673067 | MS.gene52872:CDS |
| GAAGCAGCAGCAACAGGCTC+AGG | 0.438424 | 6.1:+20670198 | None:intergenic |
| ACCGGAGAGGGATGCGGTGG+TGG | 0.439678 | 6.1:+20673216 | None:intergenic |
| GGAGAGGGATGCGGTGGTGG+TGG | 0.440819 | 6.1:+20673219 | None:intergenic |
| CAAGCCAGGCTTCGCAGAAC+AGG | 0.441419 | 6.1:-20670032 | MS.gene52872:CDS |
| TTCAAACTGGAATCGCGTTT+GGG | 0.445466 | 6.1:-20673054 | MS.gene52872:CDS |
| GAGAAAGTTGTCAGAAGTAA+AGG | 0.451385 | 6.1:-20667082 | MS.gene52872:CDS |
| TTCAATCAACTTCTTGAGTG+TGG | 0.451469 | 6.1:-20666912 | MS.gene52872:CDS |
| CGAGTCATCGTTACCGGAGA+GGG | 0.455044 | 6.1:+20673204 | None:intergenic |
| CGCGTCGGTTGTGGATGATC+AGG | 0.459332 | 6.1:-20666479 | MS.gene52872:CDS |
| TGCAGAGCTAAGGAAGATAT+TGG | 0.475185 | 6.1:-20671792 | MS.gene52872:CDS |
| GCTGGGCTGGCTAGGAGAGC+AGG | 0.475414 | 6.1:-20669930 | MS.gene52872:CDS |
| GATTGTTGTTGCGAGGAGAT+TGG | 0.482806 | 6.1:-20673077 | MS.gene52872:CDS |
| ACAAGAACTTGGTTTGTCCT+TGG | 0.490549 | 6.1:-20670244 | MS.gene52872:CDS |
| AATCTCCTCGCAACAACAAT+CGG | 0.493348 | 6.1:+20673079 | None:intergenic |
| AAAGGATCTTTACCTGATTG+AGG | 0.495264 | 6.1:-20667064 | MS.gene52872:intron |
| TTTCAAAGATGACCTCAATC+AGG | 0.498888 | 6.1:+20667052 | None:intergenic |
| AGGAAGATATTGGTCGAACT+TGG | 0.499073 | 6.1:-20671782 | MS.gene52872:CDS |
| GGCATATATCAAAATTGCTC+AGG | 0.501314 | 6.1:-20671178 | MS.gene52872:CDS |
| AACATGATTGAACAAGAACT+TGG | 0.501877 | 6.1:-20670255 | MS.gene52872:CDS |
| TCAATCAACTTCTTGAGTGT+GGG | 0.503138 | 6.1:-20666911 | MS.gene52872:CDS |
| AATCATAGGTTTATCAAGCC+AGG | 0.509593 | 6.1:-20670046 | MS.gene52872:intron |
| CTAAGAAGATTTCCAGGGTG+TGG | 0.512895 | 6.1:+20666873 | None:intergenic |
| ACCACCACCGCATCCCTCTC+CGG | 0.514196 | 6.1:-20673217 | MS.gene52872:intron |
| CAGGCTTCGCAGAACAGGAC+AGG | 0.514638 | 6.1:-20670027 | MS.gene52872:CDS |
| ACCATTCATCTTCTTAGAGT+AGG | 0.515104 | 6.1:+20666424 | None:intergenic |
| GAAATTGCAGCTTGAACACC+TGG | 0.518786 | 6.1:+20669981 | None:intergenic |
| AGGTTAGAGCTGCAGAGCTA+AGG | 0.520960 | 6.1:-20671802 | MS.gene52872:CDS |
| GATATTGGTCGAACTTGGTC+CGG | 0.522541 | 6.1:-20671777 | MS.gene52872:intron |
| CTCTGAGAAAATTTCAGCCA+AGG | 0.538341 | 6.1:+20670227 | None:intergenic |
| TGCAGGCAGTTGTCGATGAG+TGG | 0.539064 | 6.1:-20669019 | MS.gene52872:intron |
| GCAAGGTCCTTGTCATGGAA+TGG | 0.539892 | 6.1:-20667470 | MS.gene52872:CDS |
| CCTTGTCATGGAATGGATTG+AGG | 0.554585 | 6.1:-20667463 | MS.gene52872:intron |
| ATCGTTACCGGAGAGGGATG+CGG | 0.556456 | 6.1:+20673210 | None:intergenic |
| AACGCAAGATCAAAATGTCA+AGG | 0.562150 | 6.1:+20669958 | None:intergenic |
| AACTCGCAAGGTCCTTGTCA+TGG | 0.566536 | 6.1:-20667475 | MS.gene52872:CDS |
| CATGTTGAAAGCAACTTCTG+TGG | 0.571892 | 6.1:+20670272 | None:intergenic |
| TACAATAATGAAGCAAGCAA+TGG | 0.574022 | 6.1:-20668145 | MS.gene52872:CDS |
| TAAGAAGATTTCCAGGGTGT+GGG | 0.577245 | 6.1:+20666874 | None:intergenic |
| GCAGGCAGTTGTCGATGAGT+GGG | 0.578173 | 6.1:-20669018 | MS.gene52872:intron |
| ACGCAAGATCAAAATGTCAA+GGG | 0.580070 | 6.1:+20669959 | None:intergenic |
| GTGTACTCTGTGTACATCAA+AGG | 0.581508 | 6.1:+20667498 | None:intergenic |
| TATCATGCAGACCCACACCC+TGG | 0.585654 | 6.1:-20666885 | MS.gene52872:CDS |
| AATCTTCTTAGGACATCTGA+TGG | 0.602700 | 6.1:-20666861 | MS.gene52872:CDS |
| GAAAACCGATTGTTGTTGCG+AGG | 0.609141 | 6.1:-20673084 | MS.gene52872:CDS |
| ATATGGTTCTATACAAGATG+TGG | 0.611017 | 6.1:-20667526 | MS.gene52872:CDS |
| CCTCAATCCATTCCATGACA+AGG | 0.624850 | 6.1:+20667463 | None:intergenic |
| TGGTTCTATACAAGATGTGG+TGG | 0.625881 | 6.1:-20667523 | MS.gene52872:CDS |
| GGTTGTGGATGATCAGGTTG+CGG | 0.651680 | 6.1:-20666473 | MS.gene52872:CDS |
| ACGAGTCATCGTTACCGGAG+AGG | 0.663215 | 6.1:+20673203 | None:intergenic |
| CACAGAGTACACAACTCGCA+AGG | 0.664553 | 6.1:-20667487 | MS.gene52872:CDS |
| CTTCAGGAATGATAGCGCGT+CGG | 0.673068 | 6.1:-20666494 | MS.gene52872:CDS |
| GTTACCGGAGAGGGATGCGG+TGG | 0.681468 | 6.1:+20673213 | None:intergenic |
| ATGTCCTAAGAAGATTTCCA+GGG | 0.685364 | 6.1:+20666868 | None:intergenic |
| GCTGTTAAAGTACAAAGACC+AGG | 0.687316 | 6.1:-20669999 | MS.gene52872:CDS |
| GAGAGCTCATTTAGATACGA+TGG | 0.691745 | 6.1:+20670324 | None:intergenic |
| AGCTCATTTAGATACGATGG+TGG | 0.694058 | 6.1:+20670327 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAAAATAAAATCAAA+AGG | + | chr6.1:20667070-20667089 | None:intergenic | 10.0% |
| !!! | AAAAAATATATTTTAGTTTG+CGG | + | chr6.1:20668426-20668445 | None:intergenic | 10.0% |
| !!! | AAAAAATTACAAATACTTTT+AGG | + | chr6.1:20669024-20669043 | None:intergenic | 10.0% |
| !!! | AATTGTATTTTTATTTGATT+AGG | - | chr6.1:20671164-20671183 | MS.gene52872:CDS | 10.0% |
| !!! | CTTTTTTTTTTTTGATAAAT+TGG | + | chr6.1:20670773-20670792 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAGTGAATGTA+TGG | - | chr6.1:20670781-20670800 | MS.gene52872:intron | 15.0% |
| !! | AAAAAAAAAAGTGAATGTAT+GGG | - | chr6.1:20670782-20670801 | MS.gene52872:intron | 15.0% |
| !! | AAAACAATAATATATAAGGA+TGG | + | chr6.1:20671218-20671237 | None:intergenic | 15.0% |
| !! | AAACAATAATATATAAGGAT+GGG | + | chr6.1:20671217-20671236 | None:intergenic | 15.0% |
| !! | AAAGAAAATGTAAGATATAA+TGG | + | chr6.1:20672491-20672510 | None:intergenic | 15.0% |
| !! | AACATTTGTAATAAAAAACA+TGG | + | chr6.1:20668729-20668748 | None:intergenic | 15.0% |
| !! | AATACAAATATTTGGAAATA+TGG | + | chr6.1:20668958-20668977 | None:intergenic | 15.0% |
| !! | ATATATATATATATTGATGG+TGG | - | chr6.1:20672986-20673005 | MS.gene52872:intron | 15.0% |
| !! | ATCACAATACTTAATAAATT+TGG | - | chr6.1:20671752-20671771 | MS.gene52872:intron | 15.0% |
| !! | ATCCTACAAAAAAATAAAAT+TGG | + | chr6.1:20669300-20669319 | None:intergenic | 15.0% |
| !! | TACAAATAAATCAAAACTTA+CGG | + | chr6.1:20668516-20668535 | None:intergenic | 15.0% |
| !! | TGAATTTGTAACATTTAATT+GGG | - | chr6.1:20668107-20668126 | MS.gene52872:intron | 15.0% |
| !! | TTAAAACTCAATTAAAGATT+TGG | + | chr6.1:20669138-20669157 | None:intergenic | 15.0% |
| !!! | AAAAATATATTTTAGTTTGC+GGG | + | chr6.1:20668425-20668444 | None:intergenic | 15.0% |
| !!! | ACATGACATATTTAAAATTT+TGG | + | chr6.1:20668088-20668107 | None:intergenic | 15.0% |
| !!! | ACTTATGAAAAAAAACTTTT+AGG | - | chr6.1:20667474-20667493 | MS.gene52872:CDS | 15.0% |
| !!! | ACTTTTAGGTATATTTATTT+AGG | + | chr6.1:20669010-20669029 | None:intergenic | 15.0% |
| !!! | AGATTTGAAATACAAATATT+TGG | + | chr6.1:20668966-20668985 | None:intergenic | 15.0% |
| !!! | GATATTTTCTAATAATTACA+GGG | + | chr6.1:20672335-20672354 | None:intergenic | 15.0% |
| !!! | TGATATTTTCTAATAATTAC+AGG | + | chr6.1:20672336-20672355 | None:intergenic | 15.0% |
| !!! | TTCCAATTTTATTTTTTTGT+AGG | - | chr6.1:20669295-20669314 | MS.gene52872:intron | 15.0% |
| !!! | TTTTATTTTTTTGTAGGATT+TGG | - | chr6.1:20669301-20669320 | MS.gene52872:intron | 15.0% |
| !!! | TTTTTTTGATAAATTGGATT+GGG | + | chr6.1:20670767-20670786 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGATAAATTGGAT+TGG | + | chr6.1:20670768-20670787 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGTGAATGTATG+GGG | - | chr6.1:20670783-20670802 | MS.gene52872:intron | 20.0% |
| !! | AAAACAACTTACAGATTATA+CGG | - | chr6.1:20667649-20667668 | MS.gene52872:intron | 20.0% |
| !! | AACTATTCATATTGTATGTT+TGG | - | chr6.1:20670885-20670904 | MS.gene52872:intron | 20.0% |
| !! | AATAATCTTCCAAATTGATA+CGG | - | chr6.1:20672436-20672455 | MS.gene52872:intron | 20.0% |
| !! | ACATACAATATGAATAGTTA+TGG | + | chr6.1:20670884-20670903 | None:intergenic | 20.0% |
| !! | ATAAACAGTGAATTTATCTA+GGG | + | chr6.1:20672285-20672304 | None:intergenic | 20.0% |
| !! | ATAGATATGAAGATCAATAA+TGG | + | chr6.1:20670540-20670559 | None:intergenic | 20.0% |
| !! | CATATTCAAATAAATGACAA+AGG | + | chr6.1:20669110-20669129 | None:intergenic | 20.0% |
| !! | GTGAATTTGTAACATTTAAT+TGG | - | chr6.1:20668106-20668125 | MS.gene52872:intron | 20.0% |
| !! | TATTAGAAAGAACAAAAATG+TGG | + | chr6.1:20670133-20670152 | None:intergenic | 20.0% |
| !! | TCTCAAGATTCTTATATTTA+GGG | - | chr6.1:20671971-20671990 | MS.gene52872:intron | 20.0% |
| !! | TGATGTTATAACATTTCTAA+AGG | + | chr6.1:20671693-20671712 | None:intergenic | 20.0% |
| !! | TTCTCAAGATTCTTATATTT+AGG | - | chr6.1:20671970-20671989 | MS.gene52872:intron | 20.0% |
| !!! | AATTCTTAGTTTTTGCATAA+TGG | - | chr6.1:20672661-20672680 | MS.gene52872:intron | 20.0% |
| !!! | AATTGTTATTGCACAAAAAA+TGG | + | chr6.1:20671148-20671167 | None:intergenic | 20.0% |
| !!! | ATAATAGTTTAGTTTCTTAG+TGG | - | chr6.1:20668380-20668399 | MS.gene52872:intron | 20.0% |
| !!! | CTATTTCTTTTCTTTGTTTT+TGG | - | chr6.1:20668556-20668575 | MS.gene52872:intron | 20.0% |
| !!! | GAGAGAATTGATTTATATTT+CGG | - | chr6.1:20671829-20671848 | MS.gene52872:intron | 20.0% |
| !!! | GATCATGTCAATTTAATTTT+CGG | - | chr6.1:20669247-20669266 | MS.gene52872:intron | 20.0% |
| !!! | GTAATTTTTTTTATCTGATC+TGG | - | chr6.1:20669034-20669053 | MS.gene52872:intron | 20.0% |
| !!! | GTATTTTATCTTATTATCCT+TGG | - | chr6.1:20672884-20672903 | MS.gene52872:intron | 20.0% |
| !!! | TAAGTTTTTTTTTACTTCGT+TGG | - | chr6.1:20670457-20670476 | MS.gene52872:intron | 20.0% |
| !!! | TACGGAAATAAGAATTTTTT+AGG | - | chr6.1:20667667-20667686 | MS.gene52872:intron | 20.0% |
| !!! | TAGGTGTTATTTTATATCTT+AGG | - | chr6.1:20667963-20667982 | MS.gene52872:intron | 20.0% |
| !!! | TTACTGTATTTTTGCAATTA+TGG | - | chr6.1:20672235-20672254 | MS.gene52872:intron | 20.0% |
| !!! | TTTTTTGATAAATTGGATTG+GGG | + | chr6.1:20670766-20670785 | None:intergenic | 20.0% |
| ! | AAAAGTTACATGAACCTAAA+AGG | + | chr6.1:20668253-20668272 | None:intergenic | 25.0% |
| ! | AAAATTGAATACTGATCTTC+AGG | - | chr6.1:20669746-20669765 | MS.gene52872:intron | 25.0% |
| ! | AAAGAACAAAAATGTGGTTT+GGG | + | chr6.1:20670127-20670146 | None:intergenic | 25.0% |
| ! | AAAGTTACATGAACCTAAAA+GGG | + | chr6.1:20668252-20668271 | None:intergenic | 25.0% |
| ! | AAATACGAATTAGCAAACAT+TGG | + | chr6.1:20672870-20672889 | None:intergenic | 25.0% |
| ! | AAATGTTCATATGCTGTTAA+GGG | - | chr6.1:20669156-20669175 | MS.gene52872:intron | 25.0% |
| ! | AACGAAAATATCTATACCAT+GGG | + | chr6.1:20670294-20670313 | None:intergenic | 25.0% |
| ! | AATACGAATTAGCAAACATT+GGG | + | chr6.1:20672869-20672888 | None:intergenic | 25.0% |
| ! | ACGGAAAATTAAATGTTTGA+AGG | + | chr6.1:20667782-20667801 | None:intergenic | 25.0% |
| ! | ACTAAGAACATTATAGATAC+TGG | - | chr6.1:20668348-20668367 | MS.gene52872:intron | 25.0% |
| ! | AGTTTAAGCTTACAGAAATT+AGG | - | chr6.1:20670194-20670213 | MS.gene52872:CDS | 25.0% |
| ! | ATAAAATAACACCTAGTTTG+AGG | + | chr6.1:20667958-20667977 | None:intergenic | 25.0% |
| ! | ATTGAGTTATGGTAATTGAT+AGG | - | chr6.1:20667986-20668005 | MS.gene52872:intron | 25.0% |
| ! | CTAGATGTATATGTTATAAG+TGG | - | chr6.1:20673095-20673114 | MS.gene52872:intron | 25.0% |
| ! | GAAATAAACAAAATAAGAGC+AGG | + | chr6.1:20672689-20672708 | None:intergenic | 25.0% |
| ! | GAAGAGATTATGAAAATAAG+CGG | + | chr6.1:20667408-20667427 | None:intergenic | 25.0% |
| ! | GATAAACAGTGAATTTATCT+AGG | + | chr6.1:20672286-20672305 | None:intergenic | 25.0% |
| ! | GCAAAAATACAGTAATCAAA+CGG | + | chr6.1:20672230-20672249 | None:intergenic | 25.0% |
| ! | GCATTATTATTCGTTATATG+TGG | - | chr6.1:20672094-20672113 | MS.gene52872:intron | 25.0% |
| ! | GTATTGTGATTTAATCAATG+AGG | + | chr6.1:20671742-20671761 | None:intergenic | 25.0% |
| ! | GTTTAAGCTTACAGAAATTA+GGG | - | chr6.1:20670195-20670214 | MS.gene52872:CDS | 25.0% |
| ! | TAAATGTTCATATGCTGTTA+AGG | - | chr6.1:20669155-20669174 | MS.gene52872:intron | 25.0% |
| ! | TACATTTGAAAATGTGAAAG+AGG | - | chr6.1:20671923-20671942 | MS.gene52872:intron | 25.0% |
| ! | TAGAAACTGAAATTGAATAC+AGG | - | chr6.1:20671465-20671484 | MS.gene52872:intron | 25.0% |
| ! | TAGTCTAGTTAGTATTATTC+TGG | - | chr6.1:20668748-20668767 | MS.gene52872:intron | 25.0% |
| ! | TATATCTTAGGATTGAGTTA+TGG | - | chr6.1:20667975-20667994 | MS.gene52872:intron | 25.0% |
| ! | TCAATTTGGAAGATTATTTC+TGG | + | chr6.1:20672434-20672453 | None:intergenic | 25.0% |
| ! | TCCAAAATATCTATAACTAG+TGG | + | chr6.1:20671888-20671907 | None:intergenic | 25.0% |
| ! | TTGAGTTATGGTAATTGATA+GGG | - | chr6.1:20667987-20668006 | MS.gene52872:intron | 25.0% |
| ! | TTTAAGCTTACAGAAATTAG+GGG | - | chr6.1:20670196-20670215 | MS.gene52872:CDS | 25.0% |
| ! | TTTCTGAGTAAAAACTGATT+CGG | + | chr6.1:20671299-20671318 | None:intergenic | 25.0% |
| !! | AACAAGAAATGCTAATTTGT+TGG | - | chr6.1:20672067-20672086 | MS.gene52872:intron | 25.0% |
| !! | AAGTTTACTATTGCTATTGT+AGG | - | chr6.1:20672547-20672566 | MS.gene52872:intron | 25.0% |
| !! | AATTGAATCTGGTTGATATT+AGG | - | chr6.1:20669062-20669081 | MS.gene52872:intron | 25.0% |
| !! | AGTTTACTATTGCTATTGTA+GGG | - | chr6.1:20672548-20672567 | MS.gene52872:intron | 25.0% |
| !! | ATTGAATCTGGTTGATATTA+GGG | - | chr6.1:20669063-20669082 | MS.gene52872:intron | 25.0% |
| !! | CAATTTGGAAGATTATTTCT+GGG | + | chr6.1:20672433-20672452 | None:intergenic | 25.0% |
| !! | GATATTTGTGAAGAAGTTTT+AGG | - | chr6.1:20670355-20670374 | MS.gene52872:intron | 25.0% |
| !! | TAACTTGGGTTTTTATCAAA+TGG | + | chr6.1:20668676-20668695 | None:intergenic | 25.0% |
| !! | TATCATTATCAGTTTTCCTT+TGG | - | chr6.1:20668861-20668880 | MS.gene52872:intron | 25.0% |
| !! | TCCACTAGTTATAGATATTT+TGG | - | chr6.1:20671884-20671903 | MS.gene52872:intron | 25.0% |
| !! | TGTAAGATATAATGGAATGT+AGG | + | chr6.1:20672483-20672502 | None:intergenic | 25.0% |
| !! | TTATTTTCACTATCCTTGTT+TGG | - | chr6.1:20668280-20668299 | MS.gene52872:intron | 25.0% |
| !! | TTGCTACTTAAACTTCAAAA+GGG | + | chr6.1:20668151-20668170 | None:intergenic | 25.0% |
| !! | TTTATTTCCTGATAATGACT+AGG | - | chr6.1:20672701-20672720 | MS.gene52872:intron | 25.0% |
| !! | TTTGCTACTTAAACTTCAAA+AGG | + | chr6.1:20668152-20668171 | None:intergenic | 25.0% |
| !! | TTTTCCCAAATTTATCCTTT+AGG | - | chr6.1:20671805-20671824 | MS.gene52872:intron | 25.0% |
| !!! | AAAAGGGATTTCTGAAATTT+TGG | + | chr6.1:20668135-20668154 | None:intergenic | 25.0% |
| !!! | AAACTCAAAAGTACTAATCA+AGG | - | chr6.1:20670929-20670948 | MS.gene52872:intron | 25.0% |
| !!! | AATGTGAGCATTTATTTCTA+AGG | + | chr6.1:20670972-20670991 | None:intergenic | 25.0% |
| !!! | AATTTGGAAGATTATTTCTG+GGG | + | chr6.1:20672432-20672451 | None:intergenic | 25.0% |
| !!! | ACAAGAAATGCTAATTTGTT+GGG | - | chr6.1:20672068-20672087 | MS.gene52872:intron | 25.0% |
| !!! | AGAATTTTTTAGGCATTTGA+TGG | - | chr6.1:20667677-20667696 | MS.gene52872:intron | 25.0% |
| !!! | ATGGATTTTTGGATAAAAGA+AGG | - | chr6.1:20669856-20669875 | MS.gene52872:intron | 25.0% |
| !!! | CTTTGATTTTTCAAGTTTTG+TGG | - | chr6.1:20666703-20666722 | MS.gene52872:intron | 25.0% |
| !!! | GCTGGTTATTTTATAATTGT+TGG | - | chr6.1:20667907-20667926 | MS.gene52872:intron | 25.0% |
| !!! | TTTTTCTAGCCTCTTTTTAT+AGG | + | chr6.1:20671950-20671969 | None:intergenic | 25.0% |
| AAAAACCCAAGTTATGAAGA+GGG | - | chr6.1:20668682-20668701 | MS.gene52872:intron | 30.0% | |
| AAAACCCATAACTAGAGATT+CGG | - | chr6.1:20672013-20672032 | MS.gene52872:intron | 30.0% | |
| AAAATAGGTTCAACCTTTCA+AGG | + | chr6.1:20671586-20671605 | None:intergenic | 30.0% | |
| AAATCAATTCTCTCTCCTAA+AGG | + | chr6.1:20671823-20671842 | None:intergenic | 30.0% | |
| AAATCCGAATCTCTAGTTAT+GGG | + | chr6.1:20672020-20672039 | None:intergenic | 30.0% | |
| AACATGATTGAACAAGAACT+TGG | - | chr6.1:20669398-20669417 | MS.gene52872:intron | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | - | chr6.1:20670025-20670044 | MS.gene52872:CDS | 30.0% | |
| AAGAACAAAAATGTGGTTTG+GGG | + | chr6.1:20670126-20670145 | None:intergenic | 30.0% | |
| AAGCTGTTTATCCAAACATT+CGG | - | chr6.1:20667571-20667590 | MS.gene52872:intron | 30.0% | |
| AGTTTAGTGAAATAGCATGA+CGG | - | chr6.1:20671026-20671045 | MS.gene52872:intron | 30.0% | |
| ATACGAATTAGCAAACATTG+GGG | + | chr6.1:20672868-20672887 | None:intergenic | 30.0% | |
| ATCTGGTAGTTAATTGAATC+TGG | - | chr6.1:20669051-20669070 | MS.gene52872:intron | 30.0% | |
| ATGATAAGCACTTATGCAAT+AGG | - | chr6.1:20667124-20667143 | MS.gene52872:intron | 30.0% | |
| ATGATCTGATGATATGTTTG+TGG | - | chr6.1:20667195-20667214 | MS.gene52872:intron | 30.0% | |
| ATTATTCGTTATATGTGGAC+AGG | - | chr6.1:20672099-20672118 | MS.gene52872:intron | 30.0% | |
| ATTCTTATATTTAGGGACGA+AGG | - | chr6.1:20671978-20671997 | MS.gene52872:intron | 30.0% | |
| CAACGAAAATATCTATACCA+TGG | + | chr6.1:20670295-20670314 | None:intergenic | 30.0% | |
| CATTTGAGCATAACATGTAA+AGG | + | chr6.1:20669202-20669221 | None:intergenic | 30.0% | |
| CTCTCCTAAAGGATAAATTT+GGG | + | chr6.1:20671812-20671831 | None:intergenic | 30.0% | |
| GAAAGAACAAAAATGTGGTT+TGG | + | chr6.1:20670128-20670147 | None:intergenic | 30.0% | |
| GACATGAGTGTTAATGATAA+AGG | + | chr6.1:20670513-20670532 | None:intergenic | 30.0% | |
| GCTAGAAAAATACACCAATA+AGG | + | chr6.1:20669505-20669524 | None:intergenic | 30.0% | |
| TAAAAACCCAAGTTATGAAG+AGG | - | chr6.1:20668681-20668700 | MS.gene52872:intron | 30.0% | |
| TACAATAATGAAGCAAGCAA+TGG | - | chr6.1:20671508-20671527 | MS.gene52872:intron | 30.0% | |
| TACAGTAATCAAACGGTAAA+TGG | + | chr6.1:20672223-20672242 | None:intergenic | 30.0% | |
| TATTTGTGATTCTTCCTGTA+TGG | - | chr6.1:20668580-20668599 | MS.gene52872:intron | 30.0% | |
| TCTAGTTAGTATTATTCTGG+CGG | - | chr6.1:20668751-20668770 | MS.gene52872:intron | 30.0% | |
| TCTCTCCTAAAGGATAAATT+TGG | + | chr6.1:20671813-20671832 | None:intergenic | 30.0% | |
| TGATGAAATGAAAACCATAC+AGG | + | chr6.1:20668597-20668616 | None:intergenic | 30.0% | |
| TTAAGCTTACAGAAATTAGG+GGG | - | chr6.1:20670197-20670216 | MS.gene52872:CDS | 30.0% | |
| TTGATTGCTAGTTACAGAAA+AGG | - | chr6.1:20671858-20671877 | MS.gene52872:intron | 30.0% | |
| TTTAACTGTCTTAGAAATCG+TGG | - | chr6.1:20670410-20670429 | MS.gene52872:intron | 30.0% | |
| ! | AACAGACTAATTTGCATCAA+TGG | + | chr6.1:20671259-20671278 | None:intergenic | 30.0% |
| ! | AACTTTTGTCTCTGAATCAT+AGG | - | chr6.1:20669593-20669612 | MS.gene52872:intron | 30.0% |
| ! | ATATGGTTCTATACAAGATG+TGG | - | chr6.1:20672127-20672146 | MS.gene52872:intron | 30.0% |
| ! | ATCCTTGGCATTTATTCTTT+TGG | - | chr6.1:20672899-20672918 | MS.gene52872:intron | 30.0% |
| ! | CTAATGTTCATAAGCTTTTC+TGG | - | chr6.1:20667009-20667028 | MS.gene52872:intron | 30.0% |
| ! | CTGTTGAAGTTATGGATTTT+TGG | - | chr6.1:20669845-20669864 | MS.gene52872:intron | 30.0% |
| ! | GATGGCAAATTAGCTTATTT+AGG | - | chr6.1:20672810-20672829 | MS.gene52872:intron | 30.0% |
| ! | GTTTACTATTGCTATTGTAG+GGG | - | chr6.1:20672549-20672568 | MS.gene52872:intron | 30.0% |
| ! | TCAGTTCTTTTCATTGCAAA+CGG | + | chr6.1:20667801-20667820 | None:intergenic | 30.0% |
| !! | AAAAGTACTAATCAAGGACA+AGG | - | chr6.1:20670935-20670954 | MS.gene52872:intron | 30.0% |
| !! | ATGATTTGTTTCTGTTAGCA+TGG | - | chr6.1:20667702-20667721 | MS.gene52872:intron | 30.0% |
| !! | CAGAGAGCATAATTTTTAAC+AGG | + | chr6.1:20672520-20672539 | None:intergenic | 30.0% |
| !! | CATTTTGATCTTGCGTTTTA+TGG | - | chr6.1:20669701-20669720 | MS.gene52872:intron | 30.0% |
| !! | TATTACACAGTTGTTTCTCT+AGG | + | chr6.1:20672406-20672425 | None:intergenic | 30.0% |
| !!! | CGGGATTTTTTATTTTGATC+TGG | - | chr6.1:20671046-20671065 | MS.gene52872:intron | 30.0% |
| !!! | TGATTTTTCAAGTTTTGTGG+TGG | - | chr6.1:20666706-20666725 | MS.gene52872:intron | 30.0% |
| !!! | TTTTCTGCTACTCTAGTTTT+TGG | - | chr6.1:20667238-20667257 | MS.gene52872:intron | 30.0% |
| AAACACTTGTGACACTCTTT+AGG | - | chr6.1:20666969-20666988 | MS.gene52872:intron | 35.0% | |
| AAACTGGTGAAGAAAAAGAG+AGG | + | chr6.1:20671342-20671361 | None:intergenic | 35.0% | |
| AAAGCAACTTCTGTGGAAAA+TGG | + | chr6.1:20669377-20669396 | None:intergenic | 35.0% | |
| AAAGGATCTTTACCTGATTG+AGG | - | chr6.1:20672589-20672608 | MS.gene52872:intron | 35.0% | |
| AAATTCACTGTTTATCCCAG+TGG | - | chr6.1:20672290-20672309 | MS.gene52872:intron | 35.0% | |
| AACATGGTACTTCAGTAGAT+TGG | + | chr6.1:20668713-20668732 | None:intergenic | 35.0% | |
| AACCTAAAAGGGAAATTTGC+AGG | + | chr6.1:20668241-20668260 | None:intergenic | 35.0% | |
| AACGCAAGATCAAAATGTCA+AGG | + | chr6.1:20669698-20669717 | None:intergenic | 35.0% | |
| AATCATAGGTTTATCAAGCC+AGG | - | chr6.1:20669607-20669626 | MS.gene52872:intron | 35.0% | |
| AATCCTCACTAAACCAAACA+AGG | + | chr6.1:20668296-20668315 | None:intergenic | 35.0% | |
| AATCTTCTTAGGACATCTGA+TGG | - | chr6.1:20672792-20672811 | MS.gene52872:intron | 35.0% | |
| ACCTAAAAGGGAAATTTGCA+GGG | + | chr6.1:20668240-20668259 | None:intergenic | 35.0% | |
| ACGCAAGATCAAAATGTCAA+GGG | + | chr6.1:20669697-20669716 | None:intergenic | 35.0% | |
| AGAGTGTGTTAACACCAAAA+TGG | - | chr6.1:20669813-20669832 | MS.gene52872:intron | 35.0% | |
| AGCCAAAAGAATAAATGCCA+AGG | + | chr6.1:20672904-20672923 | None:intergenic | 35.0% | |
| AGCTCACAACATTACATAAG+AGG | + | chr6.1:20672366-20672385 | None:intergenic | 35.0% | |
| AGTGTCTGATATCTCAGAAT+GGG | + | chr6.1:20668643-20668662 | None:intergenic | 35.0% | |
| ATCAATGAGGTCCTATAATG+AGG | + | chr6.1:20671729-20671748 | None:intergenic | 35.0% | |
| ATGATAGCTTGAGATGTTTC+AGG | - | chr6.1:20666848-20666867 | MS.gene52872:CDS | 35.0% | |
| ATGCAATAGGCTACAAGATA+AGG | - | chr6.1:20667137-20667156 | MS.gene52872:intron | 35.0% | |
| ATGTACTCTATCCTCAAACT+AGG | - | chr6.1:20667944-20667963 | MS.gene52872:intron | 35.0% | |
| ATGTCCTAAGAAGATTTCCA+GGG | + | chr6.1:20672788-20672807 | None:intergenic | 35.0% | |
| ATTAGCAAACATTGGGGATT+TGG | + | chr6.1:20672862-20672881 | None:intergenic | 35.0% | |
| CAAATCCGAATCTCTAGTTA+TGG | + | chr6.1:20672021-20672040 | None:intergenic | 35.0% | |
| CAACCTCTTGTGTAAAAAAC+AGG | - | chr6.1:20670024-20670043 | MS.gene52872:CDS | 35.0% | |
| CATTGCATAAACTTCTGATC+AGG | + | chr6.1:20671095-20671114 | None:intergenic | 35.0% | |
| GAAAGAGGTCCTATAAAAAG+AGG | - | chr6.1:20671938-20671957 | MS.gene52872:intron | 35.0% | |
| GAATTAGTTGTGCTTCTGTA+AGG | - | chr6.1:20671114-20671133 | MS.gene52872:intron | 35.0% | |
| GACATGTTCATAAGCTCTTT+AGG | - | chr6.1:20667616-20667635 | MS.gene52872:intron | 35.0% | |
| GAGAAAGTTGTCAGAAGTAA+AGG | - | chr6.1:20672571-20672590 | MS.gene52872:intron | 35.0% | |
| GATGCATACAACTTTATTGC+AGG | - | chr6.1:20668454-20668473 | MS.gene52872:intron | 35.0% | |
| GGAAATAGTATGTGTGATCA+TGG | - | chr6.1:20670804-20670823 | MS.gene52872:intron | 35.0% | |
| GGCATATATCAAAATTGCTC+AGG | - | chr6.1:20668475-20668494 | MS.gene52872:intron | 35.0% | |
| GTGTGTTCTTGTATTTATGC+AGG | - | chr6.1:20670617-20670636 | MS.gene52872:intron | 35.0% | |
| GTTTAGTGAAATAGCATGAC+GGG | - | chr6.1:20671027-20671046 | MS.gene52872:intron | 35.0% | |
| TAACAAATCACTGCTTTCGT+AGG | + | chr6.1:20667743-20667762 | None:intergenic | 35.0% | |
| TATGTGGACAGGAACTTATA+TGG | - | chr6.1:20672110-20672129 | MS.gene52872:intron | 35.0% | |
| TCAATCAACTTCTTGAGTGT+GGG | - | chr6.1:20672742-20672761 | MS.gene52872:intron | 35.0% | |
| TCTTAAGTTCTCCGAATGTT+TGG | + | chr6.1:20667585-20667604 | None:intergenic | 35.0% | |
| TGATGATATGTTTGTGGTAG+AGG | - | chr6.1:20667201-20667220 | MS.gene52872:intron | 35.0% | |
| TGCAAAACCGAACAGTAAAA+AGG | + | chr6.1:20667832-20667851 | None:intergenic | 35.0% | |
| TGTAGGATATAGACCCAAAA+AGG | + | chr6.1:20672466-20672485 | None:intergenic | 35.0% | |
| TTCAATCAACTTCTTGAGTG+TGG | - | chr6.1:20672741-20672760 | MS.gene52872:intron | 35.0% | |
| TTCTTCCCTCTTCATAACTT+GGG | + | chr6.1:20668690-20668709 | None:intergenic | 35.0% | |
| TTTCAAAGATGACCTCAATC+AGG | + | chr6.1:20672604-20672623 | None:intergenic | 35.0% | |
| TTTCAAAGTTGTACCACGTA+TGG | - | chr6.1:20671603-20671622 | MS.gene52872:intron | 35.0% | |
| ! | AACAGCAACGATAACCATTT+TGG | + | chr6.1:20669830-20669849 | None:intergenic | 35.0% |
| ! | AATTAGGGGGCATAATTCAT+AGG | - | chr6.1:20670210-20670229 | MS.gene52872:CDS | 35.0% |
| ! | ACACTCTTTAGGAGAACTTA+TGG | - | chr6.1:20666980-20666999 | MS.gene52872:intron | 35.0% |
| ! | AGAACAAAAATGTGGTTTGG+GGG | + | chr6.1:20670125-20670144 | None:intergenic | 35.0% |
| ! | CGTGGTACAACTTTGAAAAT+AGG | + | chr6.1:20671601-20671620 | None:intergenic | 35.0% |
| ! | TATCCTTGTTTGGTTTAGTG+AGG | - | chr6.1:20668290-20668309 | MS.gene52872:intron | 35.0% |
| ! | TATCGTTGCTGTTGAAGTTA+TGG | - | chr6.1:20669837-20669856 | MS.gene52872:intron | 35.0% |
| ! | TCACTCACCTTTTTACTGTT+CGG | - | chr6.1:20667822-20667841 | MS.gene52872:intron | 35.0% |
| ! | TTTCCTGATAATGACTAGGT+AGG | - | chr6.1:20672705-20672724 | MS.gene52872:intron | 35.0% |
| ! | TTTGAAGTTCTGTCCTTGAA+AGG | - | chr6.1:20671570-20671589 | MS.gene52872:intron | 35.0% |
| ! | TTTGGAGCACACTTTAAGAA+GGG | - | chr6.1:20668879-20668898 | MS.gene52872:intron | 35.0% |
| ! | TTTTTACTGTTCGGTTTTGC+AGG | - | chr6.1:20667831-20667850 | MS.gene52872:intron | 35.0% |
| !! | CTTACACATGTATCGATTCT+AGG | + | chr6.1:20670441-20670460 | None:intergenic | 35.0% |
| !! | TTGATTCTTGAGTTTTGTGG+TGG | - | chr6.1:20666884-20666903 | MS.gene52872:CDS | 35.0% |
| !!! | ATCATGGTCTTCTTGTTTTC+TGG | - | chr6.1:20670820-20670839 | MS.gene52872:intron | 35.0% |
| !!! | GTTCATACTTTTGGCCTTAT+TGG | - | chr6.1:20669488-20669507 | MS.gene52872:intron | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr6.1:20670030-20670049 | None:intergenic | 35.0% |
| !!! | TCGTTGATTCTTGAGTTTTG+TGG | - | chr6.1:20666881-20666900 | MS.gene52872:CDS | 35.0% |
| AAAAAGAGAGGAGAGAGAGA+GGG | + | chr6.1:20671330-20671349 | None:intergenic | 40.0% | |
| AAAAGGGAAATTTGCAGGGA+AGG | + | chr6.1:20668236-20668255 | None:intergenic | 40.0% | |
| AAATAACCAGCGTGACATAC+CGG | + | chr6.1:20667898-20667917 | None:intergenic | 40.0% | |
| AATCTCCTCGCAACAACAAT+CGG | + | chr6.1:20666577-20666596 | None:intergenic | 40.0% | |
| ACAGGGTACAATTCACCAAA+TGG | - | chr6.1:20670042-20670061 | MS.gene52872:intron | 40.0% | |
| ACCAATGCATACCCGAAAAA+AGG | + | chr6.1:20670668-20670687 | None:intergenic | 40.0% | |
| ACTCCTACCTAGTCATTATC+AGG | + | chr6.1:20672711-20672730 | None:intergenic | 40.0% | |
| AGCTATGGTGAGGTTCAATT+TGG | + | chr6.1:20668213-20668232 | None:intergenic | 40.0% | |
| AGCTCATTTAGATACGATGG+TGG | + | chr6.1:20669329-20669348 | None:intergenic | 40.0% | |
| AGGAAGATATTGGTCGAACT+TGG | - | chr6.1:20667871-20667890 | MS.gene52872:intron | 40.0% | |
| AGTCTGTGACATATCTGAGA+TGG | + | chr6.1:20668027-20668046 | None:intergenic | 40.0% | |
| ATGTCTCTAAACTGGATGAC+TGG | - | chr6.1:20670162-20670181 | MS.gene52872:intron | 40.0% | |
| CAAGCAATGGTATCAAGTTC+AGG | - | chr6.1:20671521-20671540 | MS.gene52872:intron | 40.0% | |
| CAGGTAAGTGCATGCTATTA+AGG | - | chr6.1:20671540-20671559 | MS.gene52872:intron | 40.0% | |
| CAGTGTCTGATATCTCAGAA+TGG | + | chr6.1:20668644-20668663 | None:intergenic | 40.0% | |
| CATGTTGAAAGCAACTTCTG+TGG | + | chr6.1:20669384-20669403 | None:intergenic | 40.0% | |
| CTTCTTAAAGTGTGCTCCAA+AGG | + | chr6.1:20668880-20668899 | None:intergenic | 40.0% | |
| GACACTGTTTGTGACAACAT+AGG | - | chr6.1:20667348-20667367 | MS.gene52872:intron | 40.0% | |
| GAGAGCTCATTTAGATACGA+TGG | + | chr6.1:20669332-20669351 | None:intergenic | 40.0% | |
| GATGTCCTAAGAAGATTTCC+AGG | + | chr6.1:20672789-20672808 | None:intergenic | 40.0% | |
| GCTGTTAAAGTACAAAGACC+AGG | - | chr6.1:20669654-20669673 | MS.gene52872:intron | 40.0% | |
| GGTACAATTCACCAAATGGT+GGG | - | chr6.1:20670046-20670065 | MS.gene52872:intron | 40.0% | |
| GTAGTGTAGAAGCAAGAAAC+TGG | + | chr6.1:20671358-20671377 | None:intergenic | 40.0% | |
| GTCATCCAGTTTAGAGACAT+TGG | + | chr6.1:20670162-20670181 | None:intergenic | 40.0% | |
| GTGGTTAACGCTTATACTAG+CGG | - | chr6.1:20673114-20673133 | MS.gene52872:intron | 40.0% | |
| GTGTACTCTGTGTACATCAA+AGG | + | chr6.1:20672158-20672177 | None:intergenic | 40.0% | |
| GTGTCTGATATCTCAGAATG+GGG | + | chr6.1:20668642-20668661 | None:intergenic | 40.0% | |
| GTTCTTCCCTCTTCATAACT+TGG | + | chr6.1:20668691-20668710 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr6.1:20669979-20669998 | MS.gene52872:CDS | 40.0% | |
| TAAGAAGATTTCCAGGGTGT+GGG | + | chr6.1:20672782-20672801 | None:intergenic | 40.0% | |
| TGCAGAGCTAAGGAAGATAT+TGG | - | chr6.1:20667861-20667880 | MS.gene52872:intron | 40.0% | |
| TGGTTAACGCTTATACTAGC+GGG | - | chr6.1:20673115-20673134 | MS.gene52872:intron | 40.0% | |
| TTCAAACTGGAATCGCGTTT+GGG | - | chr6.1:20666599-20666618 | MS.gene52872:intron | 40.0% | |
| TTGAATACAGGCTTGAATGC+AGG | - | chr6.1:20671477-20671496 | MS.gene52872:intron | 40.0% | |
| TTGCACCAATGTCTCTAAAC+TGG | - | chr6.1:20670154-20670173 | MS.gene52872:intron | 40.0% | |
| ! | AAAGGCACACCGTATCAATT+TGG | + | chr6.1:20672448-20672467 | None:intergenic | 40.0% |
| ! | AACAAAAATGTGGTTTGGGG+GGG | + | chr6.1:20670123-20670142 | None:intergenic | 40.0% |
| ! | ATTGATACGGTGTGCCTTTT+TGG | - | chr6.1:20672449-20672468 | MS.gene52872:intron | 40.0% |
| ! | CAGGTTGCGGTGAAATATTT+TGG | - | chr6.1:20673193-20673212 | MS.gene52872:intron | 40.0% |
| ! | CTCTGAGAAAATTTCAGCCA+AGG | + | chr6.1:20669429-20669448 | None:intergenic | 40.0% |
| ! | GAACAAAAATGTGGTTTGGG+GGG | + | chr6.1:20670124-20670143 | None:intergenic | 40.0% |
| ! | TCCCTGCAAATTTCCCTTTT+AGG | - | chr6.1:20668236-20668255 | MS.gene52872:intron | 40.0% |
| ! | TCTAATAGTTTGCCACCGAA+GGG | - | chr6.1:20669934-20669953 | MS.gene52872:CDS | 40.0% |
| ! | TGATCTTGCGTTTTATGGCT+GGG | - | chr6.1:20669706-20669725 | MS.gene52872:intron | 40.0% |
| ! | TGGTTCTATACAAGATGTGG+TGG | - | chr6.1:20672130-20672149 | MS.gene52872:intron | 40.0% |
| ! | TTACACAAGAGGTTGTTTCC+AGG | + | chr6.1:20670019-20670038 | None:intergenic | 40.0% |
| ! | TTCTAAAGGATCAGAGAGCA+GGG | + | chr6.1:20671679-20671698 | None:intergenic | 40.0% |
| ! | TTCTAATAGTTTGCCACCGA+AGG | - | chr6.1:20669933-20669952 | MS.gene52872:CDS | 40.0% |
| ! | TTGATACGGTGTGCCTTTTT+GGG | - | chr6.1:20672450-20672469 | MS.gene52872:intron | 40.0% |
| ! | TTGATCTTGCGTTTTATGGC+TGG | - | chr6.1:20669705-20669724 | MS.gene52872:intron | 40.0% |
| ! | TTGGAGCACACTTTAAGAAG+GGG | - | chr6.1:20668880-20668899 | MS.gene52872:intron | 40.0% |
| ! | TTTCTAAAGGATCAGAGAGC+AGG | + | chr6.1:20671680-20671699 | None:intergenic | 40.0% |
| !! | ACAAGAACTTGGTTTGTCCT+TGG | - | chr6.1:20669409-20669428 | MS.gene52872:intron | 40.0% |
| !! | CTTTGGAGCACACTTTAAGA+AGG | - | chr6.1:20668878-20668897 | MS.gene52872:intron | 40.0% |
| !! | TTGTTTCTGTTAGCATGGAG+AGG | - | chr6.1:20667707-20667726 | MS.gene52872:intron | 40.0% |
| !! | TTTTCACTCGCAGCATTGAA+GGG | - | chr6.1:20668184-20668203 | MS.gene52872:intron | 40.0% |
| !! | TTTTTCACTCGCAGCATTGA+AGG | - | chr6.1:20668183-20668202 | MS.gene52872:intron | 40.0% |
| AAAAGAGAGGAGAGAGAGAG+GGG | + | chr6.1:20671329-20671348 | None:intergenic | 45.0% | |
| AAGGTCATGGATTCAAGTCC+TGG | - | chr6.1:20669998-20670017 | MS.gene52872:CDS | 45.0% | |
| AATTTGCAGGGAAGGAGCTA+TGG | + | chr6.1:20668228-20668247 | None:intergenic | 45.0% | |
| ACACACTTTCAGACCATACG+TGG | + | chr6.1:20671619-20671638 | None:intergenic | 45.0% | |
| ACTCGTTTACGGCAAAGTCA+GGG | - | chr6.1:20666467-20666486 | MS.gene52872:CDS | 45.0% | |
| ATCTCAGAATGGGGTTCCTA+CGG | + | chr6.1:20668633-20668652 | None:intergenic | 45.0% | |
| CACACCCTGGAAATCTTCTT+AGG | - | chr6.1:20672781-20672800 | MS.gene52872:intron | 45.0% | |
| CCATCTCATGTATTGCCACT+GGG | + | chr6.1:20672308-20672327 | None:intergenic | 45.0% | |
| CCTCAATCCATTCCATGACA+AGG | + | chr6.1:20672193-20672212 | None:intergenic | 45.0% | |
| CGGTAACGATGACTCGTTTA+CGG | - | chr6.1:20666456-20666475 | MS.gene52872:CDS | 45.0% | |
| CGTAAACGAGTCATCGTTAC+CGG | + | chr6.1:20666458-20666477 | None:intergenic | 45.0% | |
| CTAAGAAGATTTCCAGGGTG+TGG | + | chr6.1:20672783-20672802 | None:intergenic | 45.0% | |
| GAAAAAGAGAGGAGAGAGAG+AGG | + | chr6.1:20671331-20671350 | None:intergenic | 45.0% | |
| GAAATTGCAGCTTGAACACC+TGG | + | chr6.1:20669675-20669694 | None:intergenic | 45.0% | |
| GAAGTAGTATGTGAGACGCT+TGG | + | chr6.1:20668834-20668853 | None:intergenic | 45.0% | |
| GATATTGGTCGAACTTGGTC+CGG | - | chr6.1:20667876-20667895 | MS.gene52872:intron | 45.0% | |
| GGGTACAATTCACCAAATGG+TGG | - | chr6.1:20670045-20670064 | MS.gene52872:intron | 45.0% | |
| GGTGAAGGAGTAAGTAGGTT+CGG | + | chr6.1:20668790-20668809 | None:intergenic | 45.0% | |
| GGTTAACGCTTATACTAGCG+GGG | - | chr6.1:20673116-20673135 | MS.gene52872:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+TGG | - | chr6.1:20669985-20670004 | MS.gene52872:CDS | 45.0% | |
| GTGAAGGAGTAAGTAGGTTC+GGG | + | chr6.1:20668789-20668808 | None:intergenic | 45.0% | |
| GTGGCAATACATGAGATGGA+CGG | - | chr6.1:20672309-20672328 | MS.gene52872:intron | 45.0% | |
| GTTAACGCTTATACTAGCGG+GGG | - | chr6.1:20673117-20673136 | MS.gene52872:intron | 45.0% | |
| GTTCAAACTGGAATCGCGTT+TGG | - | chr6.1:20666598-20666617 | MS.gene52872:intron | 45.0% | |
| TCCATCTCATGTATTGCCAC+TGG | + | chr6.1:20672309-20672328 | None:intergenic | 45.0% | |
| TCGAGCTGATGAGATGTTTC+AGG | - | chr6.1:20666660-20666679 | MS.gene52872:intron | 45.0% | |
| TGAAGGAGTAAGTAGGTTCG+GGG | + | chr6.1:20668788-20668807 | None:intergenic | 45.0% | |
| TGAGGTCCTATAATGAGGCA+CGG | + | chr6.1:20671724-20671743 | None:intergenic | 45.0% | |
| TTAACGCTTATACTAGCGGG+GGG | - | chr6.1:20673118-20673137 | MS.gene52872:intron | 45.0% | |
| ! | ATATGCTGTTAAGGGCTAGC+AGG | - | chr6.1:20669164-20669183 | MS.gene52872:intron | 45.0% |
| ! | CTAATAGTTTGCCACCGAAG+GGG | - | chr6.1:20669935-20669954 | MS.gene52872:CDS | 45.0% |
| ! | CTTGGGCAGGTTCATACTTT+TGG | - | chr6.1:20669479-20669498 | MS.gene52872:intron | 45.0% |
| ! | GAAAACCGATTGTTGTTGCG+AGG | - | chr6.1:20666569-20666588 | MS.gene52872:intron | 45.0% |
| ! | GATTGTTGTTGCGAGGAGAT+TGG | - | chr6.1:20666576-20666595 | MS.gene52872:intron | 45.0% |
| ! | GGTCTGAAAGTGTGTGCAAA+TGG | - | chr6.1:20671624-20671643 | MS.gene52872:intron | 45.0% |
| ! | GTGAGGTTGGTTAGATGGTT+GGG | + | chr6.1:20668812-20668831 | None:intergenic | 45.0% |
| ! | TAATAGTTTGCCACCGAAGG+GGG | - | chr6.1:20669936-20669955 | MS.gene52872:CDS | 45.0% |
| ! | TGAGGTTGGTTAGATGGTTG+GGG | + | chr6.1:20668811-20668830 | None:intergenic | 45.0% |
| !! | CCTTGTCATGGAATGGATTG+AGG | - | chr6.1:20672190-20672209 | MS.gene52872:intron | 45.0% |
| !! | TTGGGAAGTGGTTTGGTTTG+AGG | - | chr6.1:20666617-20666636 | MS.gene52872:intron | 45.0% |
| !!! | GCCTTTTTTCGGGTATGCAT+TGG | - | chr6.1:20670664-20670683 | MS.gene52872:intron | 45.0% |
| !!! | GTGGGCATCAAGCCTTTTTT+CGG | - | chr6.1:20670653-20670672 | MS.gene52872:intron | 45.0% |
| !!! | TGGGCATCAAGCCTTTTTTC+GGG | - | chr6.1:20670654-20670673 | MS.gene52872:intron | 45.0% |
| !! | AAAAAAAACAATAATATATA+AGG | + | chr6.1:20671222-20671241 | None:intergenic | 5.0% |
| !! | TATATATATATATATATTGA+TGG | - | chr6.1:20672983-20673002 | MS.gene52872:intron | 5.0% |
| !!! | ATTGTTTATATTTTATTTTT+AGG | - | chr6.1:20670994-20671013 | MS.gene52872:intron | 5.0% |
| AAAGAGAGGAGAGAGAGAGG+GGG | + | chr6.1:20671328-20671347 | None:intergenic | 50.0% | |
| AAAGGATCAGAGAGCAGGGA+CGG | + | chr6.1:20671675-20671694 | None:intergenic | 50.0% | |
| AACTCGCAAGGTCCTTGTCA+TGG | - | chr6.1:20672178-20672197 | MS.gene52872:intron | 50.0% | |
| ACAAAGCTCCTGCAAACGCA+GGG | + | chr6.1:20670091-20670110 | None:intergenic | 50.0% | |
| ACAACTTTACCGTTGCGCCA+AGG | + | chr6.1:20669964-20669983 | None:intergenic | 50.0% | |
| ACAGGCTTGAATGCAGGAGA+TGG | - | chr6.1:20671483-20671502 | MS.gene52872:intron | 50.0% | |
| ACGCGTTCAACTACATCCCA+TGG | - | chr6.1:20670275-20670294 | MS.gene52872:CDS | 50.0% | |
| AGGTTAGAGCTGCAGAGCTA+AGG | - | chr6.1:20667851-20667870 | MS.gene52872:intron | 50.0% | |
| ATCGCGTTTGGGAAGTGGTT+TGG | - | chr6.1:20666610-20666629 | MS.gene52872:intron | 50.0% | |
| CACAGAGTACACAACTCGCA+AGG | - | chr6.1:20672166-20672185 | MS.gene52872:intron | 50.0% | |
| CCCAGTGGCAATACATGAGA+TGG | - | chr6.1:20672305-20672324 | MS.gene52872:intron | 50.0% | |
| CTACCTCCGTGCCTCATTAT+AGG | - | chr6.1:20671715-20671734 | MS.gene52872:intron | 50.0% | |
| CTTATTCGACCTAAGCGCGT+CGG | - | chr6.1:20666492-20666511 | MS.gene52872:CDS | 50.0% | |
| GACTCGTTTACGGCAAAGTC+AGG | - | chr6.1:20666466-20666485 | MS.gene52872:CDS | 50.0% | |
| GCAAGGTCCTTGTCATGGAA+TGG | - | chr6.1:20672183-20672202 | MS.gene52872:intron | 50.0% | |
| GCAGAACAGTGTGCATCTTC+AGG | - | chr6.1:20673143-20673162 | MS.gene52872:intron | 50.0% | |
| GTTGGGGTGAAGGAGTAAGT+AGG | + | chr6.1:20668795-20668814 | None:intergenic | 50.0% | |
| TCATATGTCAGCGCTTCCGT+AGG | - | chr6.1:20668614-20668633 | MS.gene52872:intron | 50.0% | |
| TGGTTAGATGGTTGGGGTGA+AGG | + | chr6.1:20668805-20668824 | None:intergenic | 50.0% | |
| ! | AAAAATGTGGTTTGGGGGGG+TGG | + | chr6.1:20670120-20670139 | None:intergenic | 50.0% |
| ! | AGTATGTGAGACGCTTGGTG+AGG | + | chr6.1:20668829-20668848 | None:intergenic | 50.0% |
| ! | CTGTTGCTGCTGCTTCTCTT+GGG | - | chr6.1:20669462-20669481 | MS.gene52872:intron | 50.0% |
| ! | CTTCAGGAATGATAGCGCGT+CGG | - | chr6.1:20673159-20673178 | MS.gene52872:intron | 50.0% |
| ! | GCGAGGAGATTGGTTCAAAC+TGG | - | chr6.1:20666586-20666605 | MS.gene52872:intron | 50.0% |
| ! | GCTTGGTGAGGTTGGTTAGA+TGG | + | chr6.1:20668817-20668836 | None:intergenic | 50.0% |
| ! | GGTGAGGTTGGTTAGATGGT+TGG | + | chr6.1:20668813-20668832 | None:intergenic | 50.0% |
| ! | GGTTGTGGATGATCAGGTTG+CGG | - | chr6.1:20673180-20673199 | MS.gene52872:intron | 50.0% |
| ! | TTAAGGGCTAGCAGGTGGTT+TGG | - | chr6.1:20669172-20669191 | MS.gene52872:intron | 50.0% |
| ACGAGTCATCGTTACCGGAG+AGG | + | chr6.1:20666453-20666472 | None:intergenic | 55.0% | |
| ATCGTTACCGGAGAGGGATG+CGG | + | chr6.1:20666446-20666465 | None:intergenic | 55.0% | |
| CAAACGCAGGGTTCGGGAAA+GGG | + | chr6.1:20670079-20670098 | None:intergenic | 55.0% | |
| CACAAAGCTCCTGCAAACGC+AGG | + | chr6.1:20670092-20670111 | None:intergenic | 55.0% | |
| CCAAGAGAAGCAGCAGCAAC+AGG | + | chr6.1:20669464-20669483 | None:intergenic | 55.0% | |
| CGAGTCATCGTTACCGGAGA+GGG | + | chr6.1:20666452-20666471 | None:intergenic | 55.0% | |
| CTGGAATCGCGTTTGGGAAG+TGG | - | chr6.1:20666605-20666624 | MS.gene52872:intron | 55.0% | |
| GCAGGCAGTTGTCGATGAGT+GGG | - | chr6.1:20670635-20670654 | MS.gene52872:intron | 55.0% | |
| GGTCCTATAATGAGGCACGG+AGG | + | chr6.1:20671721-20671740 | None:intergenic | 55.0% | |
| TATCATGCAGACCCACACCC+TGG | - | chr6.1:20672768-20672787 | MS.gene52872:intron | 55.0% | |
| TGCAGGCAGTTGTCGATGAG+TGG | - | chr6.1:20670634-20670653 | MS.gene52872:intron | 55.0% | |
| ! | CCTGTTGCTGCTGCTTCTCT+TGG | - | chr6.1:20669461-20669480 | MS.gene52872:intron | 55.0% |
| ! | CTTGCGTTTTATGGCTGGGC+TGG | - | chr6.1:20669710-20669729 | MS.gene52872:intron | 55.0% |
| ! | TGCTGTTAAGGGCTAGCAGG+TGG | - | chr6.1:20669167-20669186 | MS.gene52872:intron | 55.0% |
| ! | TGTGAGACGCTTGGTGAGGT+TGG | + | chr6.1:20668825-20668844 | None:intergenic | 55.0% |
| !! | GAATGATAGCGCGTCGGTTG+TGG | - | chr6.1:20673165-20673184 | MS.gene52872:intron | 55.0% |
| !!! | GTTTTATGGCTGGGCTGGCT+AGG | - | chr6.1:20669715-20669734 | MS.gene52872:intron | 55.0% |
| CAAGCCAGGCTTCGCAGAAC+AGG | - | chr6.1:20669621-20669640 | MS.gene52872:intron | 60.0% | |
| CAGGCTTCGCAGAACAGGAC+AGG | - | chr6.1:20669626-20669645 | MS.gene52872:intron | 60.0% | |
| CTCCTGCAAACGCAGGGTTC+GGG | + | chr6.1:20670085-20670104 | None:intergenic | 60.0% | |
| CTGTCCTGTTCTGCGAAGCC+TGG | + | chr6.1:20669628-20669647 | None:intergenic | 60.0% | |
| CTTGGTCCGGTATGTCACGC+TGG | - | chr6.1:20667889-20667908 | MS.gene52872:intron | 60.0% | |
| GAAGCAGCAGCAACAGGCTC+AGG | + | chr6.1:20669458-20669477 | None:intergenic | 60.0% | |
| GCAAACGCAGGGTTCGGGAA+AGG | + | chr6.1:20670080-20670099 | None:intergenic | 60.0% | |
| GCAGGGAAGGAGCTATGGTG+AGG | + | chr6.1:20668223-20668242 | None:intergenic | 60.0% | |
| GCTCCTGCAAACGCAGGGTT+CGG | + | chr6.1:20670086-20670105 | None:intergenic | 60.0% | |
| TTCCCGAACCCTGCGTTTGC+AGG | - | chr6.1:20670080-20670099 | MS.gene52872:intron | 60.0% | |
| TTTCCGCTTCCGACGCGCTT+AGG | + | chr6.1:20666504-20666523 | None:intergenic | 60.0% | |
| ! | TGCTGCTGCTTCTCTTGGGC+AGG | - | chr6.1:20669466-20669485 | MS.gene52872:intron | 60.0% |
| !! | CGCGTCGGTTGTGGATGATC+AGG | - | chr6.1:20673174-20673193 | MS.gene52872:intron | 60.0% |
| AAGGGGGAGCCTTGGCGCAA+CGG | - | chr6.1:20669952-20669971 | MS.gene52872:CDS | 65.0% | |
| ACCACCACCGCATCCCTCTC+CGG | - | chr6.1:20666436-20666455 | MS.gene52872:CDS | 65.0% | |
| AGGGTCGGGGTCCCACCATT+TGG | + | chr6.1:20670060-20670079 | None:intergenic | 65.0% | |
| CAGGGTTCGGGAAAGGGTCG+GGG | + | chr6.1:20670073-20670092 | None:intergenic | 65.0% | |
| CGACCTAAGCGCGTCGGAAG+CGG | - | chr6.1:20666498-20666517 | MS.gene52872:CDS | 65.0% | |
| CGCAGGGTTCGGGAAAGGGT+CGG | + | chr6.1:20670075-20670094 | None:intergenic | 65.0% | |
| GCAGGGTTCGGGAAAGGGTC+GGG | + | chr6.1:20670074-20670093 | None:intergenic | 65.0% | |
| GTTACCGGAGAGGGATGCGG+TGG | + | chr6.1:20666443-20666462 | None:intergenic | 65.0% | |
| TTGCGCCAAGGCTCCCCCTT+CGG | + | chr6.1:20669952-20669971 | None:intergenic | 65.0% | |
| ACCGGAGAGGGATGCGGTGG+TGG | + | chr6.1:20666440-20666459 | None:intergenic | 70.0% | |
| TGCCACCGAAGGGGGAGCCT+TGG | - | chr6.1:20669944-20669963 | MS.gene52872:CDS | 70.0% | |
| ! | GGAGAGGGATGCGGTGGTGG+TGG | + | chr6.1:20666437-20666456 | None:intergenic | 70.0% |
| !! | GCTGGGCTGGCTAGGAGAGC+AGG | - | chr6.1:20669723-20669742 | MS.gene52872:intron | 70.0% |
| CGCCAAGGCTCCCCCTTCGG+TGG | + | chr6.1:20669949-20669968 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 20666429 | 20673246 | 20666429 | ID=MS.gene52872 |
| chr6.1 | mRNA | 20666429 | 20673246 | 20666429 | ID=MS.gene52872.t1;Parent=MS.gene52872 |
| chr6.1 | exon | 20673218 | 20673246 | 20673218 | ID=MS.gene52872.t1.exon1;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20673218 | 20673246 | 20673218 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20672994 | 20673105 | 20672994 | ID=MS.gene52872.t1.exon2;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20672994 | 20673105 | 20672994 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20671778 | 20671822 | 20671778 | ID=MS.gene52872.t1.exon3;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20671778 | 20671822 | 20671778 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20671161 | 20671199 | 20671161 | ID=MS.gene52872.t1.exon4;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20671161 | 20671199 | 20671161 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20670188 | 20670358 | 20670188 | ID=MS.gene52872.t1.exon5;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20670188 | 20670358 | 20670188 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20669908 | 20670060 | 20669908 | ID=MS.gene52872.t1.exon6;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20669908 | 20670060 | 20669908 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20669000 | 20669032 | 20669000 | ID=MS.gene52872.t1.exon7;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20669000 | 20669032 | 20669000 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20668133 | 20668176 | 20668133 | ID=MS.gene52872.t1.exon8;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20668133 | 20668176 | 20668133 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20667464 | 20667554 | 20667464 | ID=MS.gene52872.t1.exon9;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20667464 | 20667554 | 20667464 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20667065 | 20667106 | 20667065 | ID=MS.gene52872.t1.exon10;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20667065 | 20667106 | 20667065 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20666844 | 20666952 | 20666844 | ID=MS.gene52872.t1.exon11;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20666844 | 20666952 | 20666844 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| chr6.1 | exon | 20666429 | 20666523 | 20666429 | ID=MS.gene52872.t1.exon12;Parent=MS.gene52872.t1 |
| chr6.1 | CDS | 20666429 | 20666523 | 20666429 | ID=cds.MS.gene52872.t1;Parent=MS.gene52872.t1 |
| Gene Sequence |
| Protein sequence |
