Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79803.t1 | XP_013452660.1 | 93.8 | 211 | 12 | 1 | 1 | 210 | 1 | 211 | 5.00E-99 | 370.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79803.t1 | Q9SJ52 | 43.5 | 161 | 85 | 5 | 26 | 184 | 60 | 216 | 6.3e-26 | 119.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79803.t1 | A0A072UCB3 | 93.8 | 211 | 12 | 1 | 1 | 210 | 1 | 211 | 3.6e-99 | 370.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene79803 | -0.817781 | 2.76E-52 | -1.69E-46 |
MS.gene049217 | MS.gene79803 | -0.81639 | 5.67E-52 | -1.69E-46 |
MS.gene049222 | MS.gene79803 | -0.800051 | 1.73E-48 | -1.69E-46 |
MS.gene049259 | MS.gene79803 | 0.827565 | 1.46E-54 | -1.69E-46 |
MS.gene049281 | MS.gene79803 | 0.836849 | 7.35E-57 | -1.69E-46 |
MS.gene049285 | MS.gene79803 | -0.802434 | 5.62E-49 | -1.69E-46 |
MS.gene049320 | MS.gene79803 | -0.840392 | 8.94E-58 | -1.69E-46 |
MS.gene049483 | MS.gene79803 | 0.801563 | 8.49E-49 | -1.69E-46 |
MS.gene049611 | MS.gene79803 | 0.803397 | 3.56E-49 | -1.69E-46 |
MS.gene049634 | MS.gene79803 | 0.824953 | 6.10E-54 | -1.69E-46 |
MS.gene050096 | MS.gene79803 | 0.802535 | 5.36E-49 | -1.69E-46 |
MS.gene050129 | MS.gene79803 | 0.80465 | 1.95E-49 | -1.69E-46 |
MS.gene050163 | MS.gene79803 | -0.805754 | 1.15E-49 | -1.69E-46 |
MS.gene050165 | MS.gene79803 | -0.802788 | 4.75E-49 | -1.69E-46 |
MS.gene050173 | MS.gene79803 | 0.804132 | 2.50E-49 | -1.69E-46 |
MS.gene050363 | MS.gene79803 | 0.836916 | 7.07E-57 | -1.69E-46 |
MS.gene050381 | MS.gene79803 | 0.868097 | 8.41E-66 | -1.69E-46 |
MS.gene050504 | MS.gene79803 | -0.834824 | 2.40E-56 | -1.69E-46 |
MS.gene050612 | MS.gene79803 | -0.831986 | 1.22E-55 | -1.69E-46 |
MS.gene050675 | MS.gene79803 | -0.808689 | 2.74E-50 | -1.69E-46 |
MS.gene050699 | MS.gene79803 | -0.811337 | 7.36E-51 | -1.69E-46 |
MS.gene05080 | MS.gene79803 | -0.800137 | 1.66E-48 | -1.69E-46 |
MS.gene050868 | MS.gene79803 | -0.830983 | 2.16E-55 | -1.69E-46 |
MS.gene050871 | MS.gene79803 | -0.8285 | 8.68E-55 | -1.69E-46 |
MS.gene050883 | MS.gene79803 | 0.832527 | 8.98E-56 | -1.69E-46 |
MS.gene050986 | MS.gene79803 | -0.821624 | 3.66E-53 | -1.69E-46 |
MS.gene051044 | MS.gene79803 | 0.853774 | 1.91E-61 | -1.69E-46 |
MS.gene05104 | MS.gene79803 | 0.801454 | 8.94E-49 | -1.69E-46 |
MS.gene051127 | MS.gene79803 | 0.867049 | 1.82E-65 | -1.69E-46 |
MS.gene051138 | MS.gene79803 | 0.870278 | 1.65E-66 | -1.69E-46 |
MS.gene051364 | MS.gene79803 | 0.806093 | 9.72E-50 | -1.69E-46 |
MS.gene05141 | MS.gene79803 | 0.808442 | 3.09E-50 | -1.69E-46 |
MS.gene051810 | MS.gene79803 | -0.801214 | 1.00E-48 | -1.69E-46 |
MS.gene051946 | MS.gene79803 | 0.849099 | 4.02E-60 | -1.69E-46 |
MS.gene051973 | MS.gene79803 | 0.811266 | 7.63E-51 | -1.69E-46 |
MS.gene052164 | MS.gene79803 | -0.827029 | 1.96E-54 | -1.69E-46 |
MS.gene052211 | MS.gene79803 | 0.844476 | 7.38E-59 | -1.69E-46 |
MS.gene052212 | MS.gene79803 | 0.802999 | 4.30E-49 | -1.69E-46 |
MS.gene052482 | MS.gene79803 | -0.801252 | 9.83E-49 | -1.69E-46 |
MS.gene052486 | MS.gene79803 | -0.807852 | 4.13E-50 | -1.69E-46 |
MS.gene053203 | MS.gene79803 | -0.809147 | 2.18E-50 | -1.69E-46 |
MS.gene053406 | MS.gene79803 | 0.805588 | 1.24E-49 | -1.69E-46 |
MS.gene053420 | MS.gene79803 | 0.888261 | 6.90E-73 | -1.69E-46 |
MS.gene053488 | MS.gene79803 | 0.858097 | 1.04E-62 | -1.69E-46 |
MS.gene053549 | MS.gene79803 | 0.821669 | 3.57E-53 | -1.69E-46 |
MS.gene053561 | MS.gene79803 | 0.871855 | 4.97E-67 | -1.69E-46 |
MS.gene053887 | MS.gene79803 | 0.808598 | 2.86E-50 | -1.69E-46 |
MS.gene054054 | MS.gene79803 | 0.803638 | 3.17E-49 | -1.69E-46 |
MS.gene054056 | MS.gene79803 | 0.814549 | 1.46E-51 | -1.69E-46 |
MS.gene054616 | MS.gene79803 | 0.815569 | 8.65E-52 | -1.69E-46 |
MS.gene054642 | MS.gene79803 | -0.800873 | 1.18E-48 | -1.69E-46 |
MS.gene054708 | MS.gene79803 | 0.839054 | 1.99E-57 | -1.69E-46 |
MS.gene05470 | MS.gene79803 | -0.824919 | 6.22E-54 | -1.69E-46 |
MS.gene054959 | MS.gene79803 | 0.830862 | 2.31E-55 | -1.69E-46 |
MS.gene055124 | MS.gene79803 | 0.83667 | 8.17E-57 | -1.69E-46 |
MS.gene055154 | MS.gene79803 | 0.882204 | 1.27E-70 | -1.69E-46 |
MS.gene055202 | MS.gene79803 | 0.815416 | 9.35E-52 | -1.69E-46 |
MS.gene055362 | MS.gene79803 | -0.838016 | 3.69E-57 | -1.69E-46 |
MS.gene055502 | MS.gene79803 | -0.827148 | 1.84E-54 | -1.69E-46 |
MS.gene055577 | MS.gene79803 | -0.82533 | 4.97E-54 | -1.69E-46 |
MS.gene05589 | MS.gene79803 | -0.821526 | 3.85E-53 | -1.69E-46 |
MS.gene055942 | MS.gene79803 | 0.810659 | 1.03E-50 | -1.69E-46 |
MS.gene056224 | MS.gene79803 | 0.831569 | 1.55E-55 | -1.69E-46 |
MS.gene056310 | MS.gene79803 | 0.802832 | 4.65E-49 | -1.69E-46 |
MS.gene056311 | MS.gene79803 | 0.82676 | 2.27E-54 | -1.69E-46 |
MS.gene056313 | MS.gene79803 | 0.810709 | 1.01E-50 | -1.69E-46 |
MS.gene056504 | MS.gene79803 | -0.816413 | 5.60E-52 | -1.69E-46 |
MS.gene056550 | MS.gene79803 | 0.817222 | 3.69E-52 | -1.69E-46 |
MS.gene056657 | MS.gene79803 | -0.808858 | 2.52E-50 | -1.69E-46 |
MS.gene056748 | MS.gene79803 | 0.803243 | 3.83E-49 | -1.69E-46 |
MS.gene056856 | MS.gene79803 | 0.816276 | 6.01E-52 | -1.69E-46 |
MS.gene056988 | MS.gene79803 | 0.803813 | 2.91E-49 | -1.69E-46 |
MS.gene057014 | MS.gene79803 | 0.847318 | 1.25E-59 | -1.69E-46 |
MS.gene058068 | MS.gene79803 | 0.826099 | 3.27E-54 | -1.69E-46 |
MS.gene058093 | MS.gene79803 | 0.801444 | 8.98E-49 | -1.69E-46 |
MS.gene058099 | MS.gene79803 | 0.844773 | 6.14E-59 | -1.69E-46 |
MS.gene058109 | MS.gene79803 | 0.801519 | 8.67E-49 | -1.69E-46 |
MS.gene058117 | MS.gene79803 | 0.823446 | 1.38E-53 | -1.69E-46 |
MS.gene058171 | MS.gene79803 | 0.811367 | 7.26E-51 | -1.69E-46 |
MS.gene058175 | MS.gene79803 | 0.810521 | 1.11E-50 | -1.69E-46 |
MS.gene058268 | MS.gene79803 | 0.812962 | 3.26E-51 | -1.69E-46 |
MS.gene058269 | MS.gene79803 | 0.819108 | 1.38E-52 | -1.69E-46 |
MS.gene05837 | MS.gene79803 | -0.809578 | 1.77E-50 | -1.69E-46 |
MS.gene058419 | MS.gene79803 | -0.818181 | 2.24E-52 | -1.69E-46 |
MS.gene058493 | MS.gene79803 | 0.83321 | 6.08E-56 | -1.69E-46 |
MS.gene058494 | MS.gene79803 | 0.818125 | 2.31E-52 | -1.69E-46 |
MS.gene058603 | MS.gene79803 | 0.847914 | 8.55E-60 | -1.69E-46 |
MS.gene058628 | MS.gene79803 | 0.803007 | 4.28E-49 | -1.69E-46 |
MS.gene058691 | MS.gene79803 | 0.812911 | 3.34E-51 | -1.69E-46 |
MS.gene058773 | MS.gene79803 | -0.807574 | 4.73E-50 | -1.69E-46 |
MS.gene058840 | MS.gene79803 | 0.821035 | 5.00E-53 | -1.69E-46 |
MS.gene059022 | MS.gene79803 | -0.850005 | 2.25E-60 | -1.69E-46 |
MS.gene059045 | MS.gene79803 | 0.814927 | 1.20E-51 | -1.69E-46 |
MS.gene059223 | MS.gene79803 | 0.83002 | 3.71E-55 | -1.69E-46 |
MS.gene059677 | MS.gene79803 | -0.829376 | 5.33E-55 | -1.69E-46 |
MS.gene059690 | MS.gene79803 | 0.840886 | 6.64E-58 | -1.69E-46 |
MS.gene059691 | MS.gene79803 | 0.836682 | 8.11E-57 | -1.69E-46 |
MS.gene059694 | MS.gene79803 | 0.849838 | 2.50E-60 | -1.69E-46 |
MS.gene059697 | MS.gene79803 | 0.850776 | 1.36E-60 | -1.69E-46 |
MS.gene059718 | MS.gene79803 | -0.817503 | 3.19E-52 | -1.69E-46 |
MS.gene059865 | MS.gene79803 | -0.827215 | 1.77E-54 | -1.69E-46 |
MS.gene059902 | MS.gene79803 | -0.805418 | 1.35E-49 | -1.69E-46 |
MS.gene059916 | MS.gene79803 | 0.838591 | 2.63E-57 | -1.69E-46 |
MS.gene059955 | MS.gene79803 | 0.803908 | 2.78E-49 | -1.69E-46 |
MS.gene060762 | MS.gene79803 | -0.815241 | 1.02E-51 | -1.69E-46 |
MS.gene06077 | MS.gene79803 | -0.836757 | 7.76E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79803.t1 | MTR_6g471080 | 91.943 | 211 | 16 | 1 | 1 | 210 | 1 | 211 | 1.48e-128 | 361 |
MS.gene79803.t1 | MTR_6g471090 | 78.537 | 205 | 43 | 1 | 3 | 206 | 6 | 210 | 2.20e-113 | 322 |
MS.gene79803.t1 | MTR_6g071410 | 73.113 | 212 | 51 | 2 | 3 | 208 | 7 | 218 | 1.21e-103 | 298 |
MS.gene79803.t1 | MTR_6g070890 | 73.113 | 212 | 51 | 2 | 3 | 208 | 7 | 218 | 1.21e-103 | 298 |
MS.gene79803.t1 | MTR_6g070900 | 70.192 | 208 | 60 | 2 | 3 | 208 | 7 | 214 | 8.43e-96 | 278 |
MS.gene79803.t1 | MTR_6g071400 | 70.192 | 208 | 60 | 2 | 3 | 208 | 7 | 214 | 8.43e-96 | 278 |
MS.gene79803.t1 | MTR_6g071710 | 69.737 | 152 | 45 | 1 | 58 | 208 | 11 | 162 | 5.60e-66 | 201 |
MS.gene79803.t1 | MTR_2g048270 | 58.553 | 152 | 55 | 5 | 45 | 195 | 2 | 146 | 5.87e-56 | 176 |
MS.gene79803.t1 | MTR_1g057270 | 43.750 | 160 | 80 | 7 | 24 | 180 | 74 | 226 | 4.65e-32 | 117 |
MS.gene79803.t1 | MTR_4g119428 | 40.000 | 180 | 99 | 7 | 17 | 194 | 65 | 237 | 2.92e-30 | 112 |
MS.gene79803.t1 | MTR_7g106030 | 32.683 | 205 | 113 | 8 | 6 | 194 | 33 | 228 | 1.28e-28 | 107 |
MS.gene79803.t1 | MTR_7g106010 | 34.759 | 187 | 112 | 6 | 11 | 193 | 43 | 223 | 5.28e-28 | 105 |
MS.gene79803.t1 | MTR_7g105870 | 43.590 | 156 | 81 | 6 | 21 | 174 | 57 | 207 | 5.88e-26 | 100 |
MS.gene79803.t1 | MTR_7g106000 | 32.086 | 187 | 105 | 8 | 5 | 176 | 31 | 210 | 2.24e-23 | 93.6 |
MS.gene79803.t1 | MTR_7g105970 | 31.217 | 189 | 108 | 8 | 5 | 178 | 31 | 212 | 5.09e-23 | 92.8 |
MS.gene79803.t1 | MTR_1g057400 | 29.808 | 208 | 117 | 10 | 5 | 194 | 10 | 206 | 2.90e-21 | 87.8 |
MS.gene79803.t1 | MTR_6g453010 | 36.628 | 172 | 83 | 5 | 11 | 176 | 17 | 168 | 1.34e-19 | 82.8 |
MS.gene79803.t1 | MTR_2g011350 | 34.884 | 86 | 55 | 1 | 20 | 104 | 37 | 122 | 1.74e-14 | 69.3 |
MS.gene79803.t1 | MTR_7g106050 | 28.947 | 152 | 101 | 4 | 6 | 154 | 19 | 166 | 2.65e-14 | 69.3 |
MS.gene79803.t1 | MTR_3g063310 | 34.074 | 135 | 76 | 5 | 21 | 148 | 83 | 211 | 2.15e-13 | 67.4 |
MS.gene79803.t1 | MTR_1g057290 | 33.918 | 171 | 98 | 8 | 30 | 193 | 51 | 213 | 6.47e-13 | 65.5 |
MS.gene79803.t1 | MTR_1g019920 | 42.105 | 76 | 38 | 3 | 19 | 89 | 3 | 77 | 3.90e-12 | 60.5 |
MS.gene79803.t1 | MTR_2g087000 | 25.568 | 176 | 118 | 4 | 9 | 180 | 52 | 218 | 8.31e-12 | 62.8 |
MS.gene79803.t1 | MTR_2g086790 | 24.561 | 171 | 112 | 5 | 4 | 161 | 16 | 182 | 3.01e-11 | 60.8 |
MS.gene79803.t1 | MTR_1g057420 | 31.884 | 138 | 88 | 5 | 26 | 161 | 39 | 172 | 4.19e-11 | 60.5 |
MS.gene79803.t1 | MTR_5g076170 | 31.496 | 127 | 84 | 3 | 24 | 148 | 97 | 222 | 6.82e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79803.t1 | AT2G35980 | 43.750 | 176 | 82 | 6 | 12 | 174 | 35 | 206 | 4.20e-36 | 126 |
MS.gene79803.t1 | AT2G35460 | 34.921 | 189 | 113 | 7 | 7 | 193 | 54 | 234 | 3.42e-30 | 111 |
MS.gene79803.t1 | AT5G06320 | 38.172 | 186 | 104 | 8 | 11 | 194 | 52 | 228 | 5.68e-30 | 110 |
MS.gene79803.t1 | AT3G11650 | 31.937 | 191 | 122 | 6 | 4 | 193 | 52 | 235 | 8.51e-28 | 105 |
MS.gene79803.t1 | AT3G52470 | 34.545 | 110 | 70 | 2 | 4 | 111 | 16 | 125 | 2.09e-16 | 74.7 |
MS.gene79803.t1 | AT1G32270 | 29.677 | 155 | 102 | 5 | 28 | 180 | 1 | 150 | 6.48e-15 | 72.4 |
MS.gene79803.t1 | AT1G32270 | 29.677 | 155 | 102 | 5 | 28 | 180 | 1 | 150 | 1.46e-14 | 72.0 |
MS.gene79803.t1 | AT4G09590 | 29.139 | 151 | 102 | 5 | 6 | 154 | 21 | 168 | 5.47e-14 | 68.6 |
MS.gene79803.t1 | AT3G11660 | 29.940 | 167 | 99 | 6 | 4 | 161 | 15 | 172 | 5.70e-14 | 68.2 |
MS.gene79803.t1 | AT2G35960 | 31.469 | 143 | 92 | 5 | 21 | 161 | 35 | 173 | 5.32e-13 | 65.5 |
MS.gene79803.t1 | AT2G35970 | 29.139 | 151 | 102 | 5 | 6 | 154 | 21 | 168 | 1.09e-12 | 64.7 |
MS.gene79803.t1 | AT1G65690 | 30.872 | 149 | 96 | 6 | 9 | 154 | 71 | 215 | 4.81e-12 | 63.5 |
MS.gene79803.t1 | AT3G44220 | 29.932 | 147 | 95 | 6 | 16 | 160 | 31 | 171 | 2.74e-11 | 60.8 |
Find 37 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCACCACTGCTACATCTTC+TGG | 0.249772 | 6.2:-73016384 | None:intergenic |
CTTCTGGGACTAAAAGAAAA+TGG | 0.303320 | 6.2:-73016368 | None:intergenic |
TCTTGGGATTTATAAAGATT+TGG | 0.312711 | 6.2:+73016211 | MS.gene79803:CDS |
TAATCACCATCATCGTCTTC+TGG | 0.338455 | 6.2:+73015871 | MS.gene79803:CDS |
TAGCAGTGGTGATTTCTTTA+CGG | 0.343521 | 6.2:+73016394 | MS.gene79803:CDS |
ATTCGAATTAGAGCTAAGTA+TGG | 0.426821 | 6.2:+73016248 | MS.gene79803:CDS |
AAACGACGACACTGCAGAAC+CGG | 0.436027 | 6.2:-73016302 | None:intergenic |
TGGTGATGATAAGTTACTAT+TGG | 0.447132 | 6.2:-73016348 | None:intergenic |
GACTGGTCGGTTTAATCCAC+CGG | 0.447589 | 6.2:+73016283 | MS.gene79803:CDS |
ACGTGAAATTTCACACTTGA+GGG | 0.456152 | 6.2:-73015906 | None:intergenic |
ATAGACTATGATGTTGTTGT+TGG | 0.461075 | 6.2:-73016012 | None:intergenic |
TCACCACTGCTACATCTTCT+GGG | 0.464477 | 6.2:-73016383 | None:intergenic |
TAGACTATGATGTTGTTGTT+GGG | 0.464761 | 6.2:-73016011 | None:intergenic |
ACCTCACCACAAATATGGGC+TGG | 0.466850 | 6.2:+73015802 | None:intergenic |
ACTTTGACACCCTTTGATCA+AGG | 0.484433 | 6.2:+73016089 | MS.gene79803:CDS |
TATTCTGAAGAGACACGTCT+TGG | 0.496905 | 6.2:+73016194 | MS.gene79803:CDS |
GGAAATTCTATCATCAAACT+TGG | 0.500531 | 6.2:+73016152 | MS.gene79803:CDS |
CTTGGACCTATCGAATTCAA+AGG | 0.500883 | 6.2:+73016131 | MS.gene79803:CDS |
TATGGAAGCTTCTATAAGAC+TGG | 0.528774 | 6.2:+73016266 | MS.gene79803:CDS |
ATTCTGAAGAGACACGTCTT+GGG | 0.539671 | 6.2:+73016195 | MS.gene79803:CDS |
GAAGAATCAAGGCGATTGCT+TGG | 0.539774 | 6.2:+73016039 | MS.gene79803:CDS |
AGTCTATTATCGAAGAATCA+AGG | 0.541807 | 6.2:+73016028 | MS.gene79803:CDS |
AGACTATGATGTTGTTGTTG+GGG | 0.552465 | 6.2:-73016010 | None:intergenic |
TTCGATAGGTCCAAGAAAAG+TGG | 0.557190 | 6.2:-73016123 | None:intergenic |
TTGCTGCTCTATTTATATCA+CGG | 0.562755 | 6.2:-73016418 | None:intergenic |
TACGTGAAATTTCACACTTG+AGG | 0.573509 | 6.2:-73015907 | None:intergenic |
GAATTTCCTTTGAATTCGAT+AGG | 0.573832 | 6.2:-73016137 | None:intergenic |
CCTCACCACAAATATGGGCT+GGG | 0.580818 | 6.2:+73015803 | None:intergenic |
GAAGCTTCTATAAGACTGGT+CGG | 0.586174 | 6.2:+73016270 | MS.gene79803:CDS |
TATTATCCAGAAGACGATGA+TGG | 0.595315 | 6.2:-73015877 | None:intergenic |
AATATAAGTTGCTGTTTGTG+AGG | 0.598826 | 6.2:-73015956 | None:intergenic |
GCTGTTTGTGAGGTTGAACT+CGG | 0.599586 | 6.2:-73015946 | None:intergenic |
GAACTCGGTGAGAGTTGCAT+CGG | 0.601986 | 6.2:-73015931 | None:intergenic |
CGACGACACTGCAGAACCGG+TGG | 0.610886 | 6.2:-73016299 | None:intergenic |
AGTCCCAGAAGATGTAGCAG+TGG | 0.649919 | 6.2:+73016380 | MS.gene79803:CDS |
CGATGATGGTGATTACGAAG+AGG | 0.658850 | 6.2:-73015863 | None:intergenic |
CTATTGGAAGAAGAAATCAA+AGG | 0.724031 | 6.2:-73016332 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TCTTGGGATTTATAAAGATT+TGG | + | chr6.2:73016211-73016230 | MS.gene79803:CDS | 25.0% |
AGTCTATTATCGAAGAATCA+AGG | + | chr6.2:73016028-73016047 | MS.gene79803:CDS | 30.0% | |
ATAGACTATGATGTTGTTGT+TGG | - | chr6.2:73016015-73016034 | None:intergenic | 30.0% | |
ATTCGAATTAGAGCTAAGTA+TGG | + | chr6.2:73016248-73016267 | MS.gene79803:CDS | 30.0% | |
CTATTGGAAGAAGAAATCAA+AGG | - | chr6.2:73016335-73016354 | None:intergenic | 30.0% | |
GAATTTCCTTTGAATTCGAT+AGG | - | chr6.2:73016140-73016159 | None:intergenic | 30.0% | |
GGAAATTCTATCATCAAACT+TGG | + | chr6.2:73016152-73016171 | MS.gene79803:CDS | 30.0% | |
TTGCTGCTCTATTTATATCA+CGG | - | chr6.2:73016421-73016440 | None:intergenic | 30.0% | |
! | ATTTTTGTGTCCTTGATCAA+AGG | - | chr6.2:73016102-73016121 | None:intergenic | 30.0% |
! | TAGACTATGATGTTGTTGTT+GGG | - | chr6.2:73016014-73016033 | None:intergenic | 30.0% |
! | TGGTGATGATAAGTTACTAT+TGG | - | chr6.2:73016351-73016370 | None:intergenic | 30.0% |
! | TTTTTGTGTCCTTGATCAAA+GGG | - | chr6.2:73016101-73016120 | None:intergenic | 30.0% |
!! | AATATAAGTTGCTGTTTGTG+AGG | - | chr6.2:73015959-73015978 | None:intergenic | 30.0% |
!! | CACAAAAATACCACTTTTCT+TGG | + | chr6.2:73016113-73016132 | MS.gene79803:CDS | 30.0% |
ACGTGAAATTTCACACTTGA+GGG | - | chr6.2:73015909-73015928 | None:intergenic | 35.0% | |
TACGTGAAATTTCACACTTG+AGG | - | chr6.2:73015910-73015929 | None:intergenic | 35.0% | |
TAGCAGTGGTGATTTCTTTA+CGG | + | chr6.2:73016394-73016413 | MS.gene79803:CDS | 35.0% | |
TATGGAAGCTTCTATAAGAC+TGG | + | chr6.2:73016266-73016285 | MS.gene79803:CDS | 35.0% | |
TATTATCCAGAAGACGATGA+TGG | - | chr6.2:73015880-73015899 | None:intergenic | 35.0% | |
! | AGACTATGATGTTGTTGTTG+GGG | - | chr6.2:73016013-73016032 | None:intergenic | 35.0% |
!! | CTTCTGGGACTAAAAGAAAA+TGG | - | chr6.2:73016371-73016390 | None:intergenic | 35.0% |
ACTTTGACACCCTTTGATCA+AGG | + | chr6.2:73016089-73016108 | MS.gene79803:CDS | 40.0% | |
CTTGGACCTATCGAATTCAA+AGG | + | chr6.2:73016131-73016150 | MS.gene79803:CDS | 40.0% | |
GAAGCTTCTATAAGACTGGT+CGG | + | chr6.2:73016270-73016289 | MS.gene79803:CDS | 40.0% | |
TAATCACCATCATCGTCTTC+TGG | + | chr6.2:73015871-73015890 | MS.gene79803:CDS | 40.0% | |
TTCGATAGGTCCAAGAAAAG+TGG | - | chr6.2:73016126-73016145 | None:intergenic | 40.0% | |
! | ATTCTGAAGAGACACGTCTT+GGG | + | chr6.2:73016195-73016214 | MS.gene79803:CDS | 40.0% |
! | TATTCTGAAGAGACACGTCT+TGG | + | chr6.2:73016194-73016213 | MS.gene79803:CDS | 40.0% |
ATCACCACTGCTACATCTTC+TGG | - | chr6.2:73016387-73016406 | None:intergenic | 45.0% | |
GAAGAATCAAGGCGATTGCT+TGG | + | chr6.2:73016039-73016058 | MS.gene79803:CDS | 45.0% | |
GCTGTTTGTGAGGTTGAACT+CGG | - | chr6.2:73015949-73015968 | None:intergenic | 45.0% | |
TCACCACTGCTACATCTTCT+GGG | - | chr6.2:73016386-73016405 | None:intergenic | 45.0% | |
! | CGATGATGGTGATTACGAAG+AGG | - | chr6.2:73015866-73015885 | None:intergenic | 45.0% |
AAACGACGACACTGCAGAAC+CGG | - | chr6.2:73016305-73016324 | None:intergenic | 50.0% | |
AGTCCCAGAAGATGTAGCAG+TGG | + | chr6.2:73016380-73016399 | MS.gene79803:CDS | 50.0% | |
! | GAACTCGGTGAGAGTTGCAT+CGG | - | chr6.2:73015934-73015953 | None:intergenic | 50.0% |
! | GACTGGTCGGTTTAATCCAC+CGG | + | chr6.2:73016283-73016302 | MS.gene79803:CDS | 50.0% |
CGACGACACTGCAGAACCGG+TGG | - | chr6.2:73016302-73016321 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 73015816 | 73016448 | 73015816 | ID=MS.gene79803 |
chr6.2 | mRNA | 73015816 | 73016448 | 73015816 | ID=MS.gene79803.t1;Parent=MS.gene79803 |
chr6.2 | exon | 73015816 | 73016448 | 73015816 | ID=MS.gene79803.t1.exon1;Parent=MS.gene79803.t1 |
chr6.2 | CDS | 73015816 | 73016448 | 73015816 | ID=cds.MS.gene79803.t1;Parent=MS.gene79803.t1 |
Gene Sequence |
Protein sequence |