Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90981.t1 | RHN61504.1 | 66.2 | 136 | 1 | 1 | 1 | 91 | 1 | 136 | 2.10E-34 | 154.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90981.t1 | P27484 | 72.2 | 72 | 20 | 0 | 2 | 73 | 5 | 76 | 2.5e-25 | 115.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90981.t1 | A0A396IB73 | 66.2 | 136 | 1 | 1 | 1 | 91 | 1 | 136 | 1.5e-34 | 154.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene90981.t1 | TF | CSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene90981 | -0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene049255 | MS.gene90981 | 0.902863 | 6.27E-79 | -1.69E-46 |
| MS.gene049340 | MS.gene90981 | 0.840962 | 6.34E-58 | -1.69E-46 |
| MS.gene049341 | MS.gene90981 | 0.861952 | 7.15E-64 | -1.69E-46 |
| MS.gene049653 | MS.gene90981 | 0.814109 | 1.82E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene90981 | 0.806632 | 7.48E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene90981 | 0.803166 | 3.97E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene90981 | 0.818838 | 1.59E-52 | -1.69E-46 |
| MS.gene050277 | MS.gene90981 | 0.881535 | 2.21E-70 | -1.69E-46 |
| MS.gene050303 | MS.gene90981 | 0.836812 | 7.51E-57 | -1.69E-46 |
| MS.gene050437 | MS.gene90981 | 0.850607 | 1.52E-60 | -1.69E-46 |
| MS.gene050689 | MS.gene90981 | 0.844153 | 9.02E-59 | -1.69E-46 |
| MS.gene050752 | MS.gene90981 | 0.846414 | 2.20E-59 | -1.69E-46 |
| MS.gene050807 | MS.gene90981 | 0.813228 | 2.85E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene90981 | 0.816592 | 5.11E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene90981 | 0.801436 | 9.01E-49 | -1.69E-46 |
| MS.gene050955 | MS.gene90981 | 0.850265 | 1.90E-60 | -1.69E-46 |
| MS.gene051003 | MS.gene90981 | 0.808622 | 2.83E-50 | -1.69E-46 |
| MS.gene051241 | MS.gene90981 | 0.860781 | 1.63E-63 | -1.69E-46 |
| MS.gene051243 | MS.gene90981 | 0.83592 | 1.27E-56 | -1.69E-46 |
| MS.gene051328 | MS.gene90981 | 0.873248 | 1.70E-67 | -1.69E-46 |
| MS.gene05134 | MS.gene90981 | 0.899146 | 2.65E-77 | -1.69E-46 |
| MS.gene051746 | MS.gene90981 | 0.810487 | 1.12E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene90981 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene90981 | 0.828467 | 8.85E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene90981 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene052286 | MS.gene90981 | 0.817397 | 3.37E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene90981 | 0.801004 | 1.10E-48 | -1.69E-46 |
| MS.gene052879 | MS.gene90981 | 0.834207 | 3.42E-56 | -1.69E-46 |
| MS.gene052880 | MS.gene90981 | 0.824532 | 7.67E-54 | -1.69E-46 |
| MS.gene052947 | MS.gene90981 | 0.875847 | 2.23E-68 | -1.69E-46 |
| MS.gene053008 | MS.gene90981 | 0.806742 | 7.10E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene90981 | 0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene053590 | MS.gene90981 | 0.826819 | 2.20E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene90981 | 0.828438 | 8.99E-55 | -1.69E-46 |
| MS.gene053931 | MS.gene90981 | 0.828915 | 6.89E-55 | -1.69E-46 |
| MS.gene054403 | MS.gene90981 | 0.849088 | 4.05E-60 | -1.69E-46 |
| MS.gene054657 | MS.gene90981 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene05476 | MS.gene90981 | 0.802327 | 5.91E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene90981 | 0.864017 | 1.64E-64 | -1.69E-46 |
| MS.gene05517 | MS.gene90981 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene90981 | 0.819205 | 1.31E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene90981 | 0.821975 | 3.03E-53 | -1.69E-46 |
| MS.gene055555 | MS.gene90981 | 0.846944 | 1.58E-59 | -1.69E-46 |
| MS.gene055808 | MS.gene90981 | 0.834078 | 3.69E-56 | -1.69E-46 |
| MS.gene055912 | MS.gene90981 | 0.828752 | 7.55E-55 | -1.69E-46 |
| MS.gene056215 | MS.gene90981 | 0.822395 | 2.42E-53 | -1.69E-46 |
| MS.gene056601 | MS.gene90981 | 0.835906 | 1.28E-56 | -1.69E-46 |
| MS.gene056631 | MS.gene90981 | 0.867887 | 9.82E-66 | -1.69E-46 |
| MS.gene057057 | MS.gene90981 | 0.816637 | 4.99E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene90981 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene90981 | 0.805157 | 1.53E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene90981 | 0.828782 | 7.42E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene90981 | 0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene057392 | MS.gene90981 | 0.833317 | 5.72E-56 | -1.69E-46 |
| MS.gene057693 | MS.gene90981 | 0.802955 | 4.39E-49 | -1.69E-46 |
| MS.gene057694 | MS.gene90981 | 0.834018 | 3.82E-56 | -1.69E-46 |
| MS.gene057705 | MS.gene90981 | 0.914177 | 2.60E-84 | -1.69E-46 |
| MS.gene05781 | MS.gene90981 | 0.801283 | 9.69E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene90981 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene90981 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene90981 | 0.808165 | 3.54E-50 | -1.69E-46 |
| MS.gene058088 | MS.gene90981 | 0.807584 | 4.71E-50 | -1.69E-46 |
| MS.gene058216 | MS.gene90981 | 0.813673 | 2.27E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene90981 | 0.821534 | 3.84E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene90981 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene058783 | MS.gene90981 | 0.8082 | 3.48E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene90981 | 0.806798 | 6.91E-50 | -1.69E-46 |
| MS.gene059151 | MS.gene90981 | 0.812842 | 3.46E-51 | -1.69E-46 |
| MS.gene059317 | MS.gene90981 | 0.835874 | 1.30E-56 | -1.69E-46 |
| MS.gene05954 | MS.gene90981 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene90981 | 0.833631 | 4.77E-56 | -1.69E-46 |
| MS.gene05979 | MS.gene90981 | 0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene90981 | 0.805556 | 1.26E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene90981 | 0.813705 | 2.24E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene90981 | 0.843425 | 1.41E-58 | -1.69E-46 |
| MS.gene060429 | MS.gene90981 | 0.871174 | 8.35E-67 | -1.69E-46 |
| MS.gene060586 | MS.gene90981 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene060763 | MS.gene90981 | 0.809014 | 2.33E-50 | -1.69E-46 |
| MS.gene060917 | MS.gene90981 | 0.859337 | 4.43E-63 | -1.69E-46 |
| MS.gene061176 | MS.gene90981 | 0.813044 | 3.12E-51 | -1.69E-46 |
| MS.gene061177 | MS.gene90981 | 0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene061178 | MS.gene90981 | 0.81315 | 2.96E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90981.t1 | AT2G17870 | 64.789 | 71 | 25 | 0 | 2 | 72 | 7 | 77 | 7.50e-29 | 105 |
| MS.gene90981.t1 | AT2G21060 | 61.644 | 73 | 28 | 0 | 3 | 75 | 12 | 84 | 4.51e-28 | 101 |
| MS.gene90981.t1 | AT4G36020 | 60.563 | 71 | 28 | 0 | 2 | 72 | 7 | 77 | 2.88e-25 | 95.5 |
| MS.gene90981.t1 | AT4G36020 | 60.563 | 71 | 28 | 0 | 2 | 72 | 7 | 77 | 5.15e-25 | 95.5 |
| MS.gene90981.t1 | AT4G36020 | 60.563 | 71 | 28 | 0 | 2 | 72 | 7 | 77 | 5.15e-25 | 95.5 |
| MS.gene90981.t1 | AT4G38680 | 60.274 | 73 | 29 | 0 | 3 | 75 | 8 | 80 | 2.12e-22 | 86.7 |
Find 32 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGTGGGTCAAAATTAAC+TGG | 0.306323 | 4.2:+34826993 | MS.gene90981:CDS |
| TTCAATGATCAGAAGGGGTT+TGG | 0.339445 | 4.2:+34827029 | MS.gene90981:CDS |
| AACTCCTCACTTCCATCATC+AGG | 0.391515 | 4.2:-34827062 | None:intergenic |
| TGCTACAGCTGTGGTGAATC+TGG | 0.396062 | 4.2:+34827542 | MS.gene90981:intron |
| CATCGGTTTGGATCTGAGAT+TGG | 0.429198 | 4.2:-34827094 | None:intergenic |
| TTTGCAAGAGATTGTCCAAC+AGG | 0.433866 | 4.2:+34827569 | MS.gene90981:CDS |
| AATTAACTGGGAAGGTGAAA+TGG | 0.440654 | 4.2:+34827006 | MS.gene90981:CDS |
| TCCAAGGCTGTTAGTGTGAC+TGG | 0.440806 | 4.2:+34827182 | MS.gene90981:CDS |
| GTGAGCGGAATCCATCGGTT+TGG | 0.468363 | 4.2:-34827106 | None:intergenic |
| GGATTCATCACCCCTGATGA+TGG | 0.483119 | 4.2:+34827050 | MS.gene90981:CDS |
| CTTCAACGAGCGCTGCCTGT+TGG | 0.500201 | 4.2:-34827584 | None:intergenic |
| TCCAGTCACACTAACAGCCT+TGG | 0.511590 | 4.2:-34827183 | None:intergenic |
| AGCAAGTGAGCGGAATCCAT+CGG | 0.551382 | 4.2:-34827111 | None:intergenic |
| GTTAGTGTGACTGGACCTGA+TGG | 0.557938 | 4.2:+34827191 | MS.gene90981:CDS |
| AAAATTCAATTCATCATGAG+TGG | 0.563070 | 4.2:+34826978 | None:intergenic |
| GAAATGGTTCAATGATCAGA+AGG | 0.565831 | 4.2:+34827022 | MS.gene90981:CDS |
| AGATCTGAGTAAAGTGGTGG+TGG | 0.576919 | 4.2:+34827605 | MS.gene90981:CDS |
| CGTTGAAGATCTGAGTAAAG+TGG | 0.585840 | 4.2:+34827599 | MS.gene90981:CDS |
| GGATTCCGCTCACTTGCTGA+AGG | 0.587573 | 4.2:+34827116 | MS.gene90981:CDS |
| ACTCCTCACTTCCATCATCA+GGG | 0.589005 | 4.2:-34827061 | None:intergenic |
| AAATTCAATTCATCATGAGT+GGG | 0.603310 | 4.2:+34826979 | None:intergenic |
| CAATCTCAGATCCAAACCGA+TGG | 0.617544 | 4.2:+34827095 | MS.gene90981:CDS |
| TGATAACGATGGAAGATCCA+AGG | 0.617668 | 4.2:+34827166 | MS.gene90981:CDS |
| AAATGGTTCAATGATCAGAA+GGG | 0.619071 | 4.2:+34827023 | MS.gene90981:CDS |
| CACCCCTGATGATGGAAGTG+AGG | 0.619233 | 4.2:+34827058 | MS.gene90981:CDS |
| AATGGTTCAATGATCAGAAG+GGG | 0.619776 | 4.2:+34827024 | MS.gene90981:CDS |
| TGGGTCAAAATTAACTGGGA+AGG | 0.622767 | 4.2:+34826998 | MS.gene90981:CDS |
| CAGATTGAGTCTGATAACGA+TGG | 0.643460 | 4.2:+34827155 | MS.gene90981:CDS |
| CTCCTCACTTCCATCATCAG+GGG | 0.654781 | 4.2:-34827060 | None:intergenic |
| ATTCACCTTCAGCAAGTGAG+CGG | 0.656812 | 4.2:-34827121 | None:intergenic |
| TGAGTGGGTCAAAATTAACT+GGG | 0.660344 | 4.2:+34826994 | MS.gene90981:CDS |
| TGAAGATCTGAGTAAAGTGG+TGG | 0.733020 | 4.2:+34827602 | MS.gene90981:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAATGGTTCAATGATCAGAA+GGG | + | chr4.2:34827023-34827042 | MS.gene90981:CDS | 30.0% | |
| AATGGTTCAATGATCAGAAG+GGG | + | chr4.2:34827024-34827043 | MS.gene90981:CDS | 35.0% | |
| AATTAACTGGGAAGGTGAAA+TGG | + | chr4.2:34827006-34827025 | MS.gene90981:CDS | 35.0% | |
| ATGAGTGGGTCAAAATTAAC+TGG | + | chr4.2:34826993-34827012 | MS.gene90981:CDS | 35.0% | |
| GAAATGGTTCAATGATCAGA+AGG | + | chr4.2:34827022-34827041 | MS.gene90981:CDS | 35.0% | |
| TGAGTGGGTCAAAATTAACT+GGG | + | chr4.2:34826994-34827013 | MS.gene90981:CDS | 35.0% | |
| CGTTGAAGATCTGAGTAAAG+TGG | + | chr4.2:34827599-34827618 | MS.gene90981:CDS | 40.0% | |
| TGAAGATCTGAGTAAAGTGG+TGG | + | chr4.2:34827602-34827621 | MS.gene90981:CDS | 40.0% | |
| TGGGTCAAAATTAACTGGGA+AGG | + | chr4.2:34826998-34827017 | MS.gene90981:CDS | 40.0% | |
| TGTTACAACTGTGGTGAATC+TGG | + | chr4.2:34827431-34827450 | MS.gene90981:intron | 40.0% | |
| TTCAATGATCAGAAGGGGTT+TGG | + | chr4.2:34827029-34827048 | MS.gene90981:CDS | 40.0% | |
| TTTGCAAGAGATTGTCCAAC+AGG | + | chr4.2:34827569-34827588 | MS.gene90981:CDS | 40.0% | |
| ! | CAGATTGAGTCTGATAACGA+TGG | + | chr4.2:34827155-34827174 | MS.gene90981:CDS | 40.0% |
| ! | TGATAACGATGGAAGATCCA+AGG | + | chr4.2:34827166-34827185 | MS.gene90981:CDS | 40.0% |
| AACTCCTCACTTCCATCATC+AGG | - | chr4.2:34827065-34827084 | None:intergenic | 45.0% | |
| ACTCCTCACTTCCATCATCA+GGG | - | chr4.2:34827064-34827083 | None:intergenic | 45.0% | |
| AGATCTGAGTAAAGTGGTGG+TGG | + | chr4.2:34827605-34827624 | MS.gene90981:CDS | 45.0% | |
| ATTCACCTTCAGCAAGTGAG+CGG | - | chr4.2:34827124-34827143 | None:intergenic | 45.0% | |
| CAATCTCAGATCCAAACCGA+TGG | + | chr4.2:34827095-34827114 | MS.gene90981:CDS | 45.0% | |
| !! | CATCGGTTTGGATCTGAGAT+TGG | - | chr4.2:34827097-34827116 | None:intergenic | 45.0% |
| AGCAAGTGAGCGGAATCCAT+CGG | - | chr4.2:34827114-34827133 | None:intergenic | 50.0% | |
| CTCCTCACTTCCATCATCAG+GGG | - | chr4.2:34827063-34827082 | None:intergenic | 50.0% | |
| GGATTCATCACCCCTGATGA+TGG | + | chr4.2:34827050-34827069 | MS.gene90981:CDS | 50.0% | |
| GTTAGTGTGACTGGACCTGA+TGG | + | chr4.2:34827191-34827210 | MS.gene90981:CDS | 50.0% | |
| TCCAAGGCTGTTAGTGTGAC+TGG | + | chr4.2:34827182-34827201 | MS.gene90981:CDS | 50.0% | |
| TCCAGTCACACTAACAGCCT+TGG | - | chr4.2:34827186-34827205 | None:intergenic | 50.0% | |
| TCTGTTCAAGGATCGAGACG+CGG | + | chr4.2:34827218-34827237 | MS.gene90981:intron | 50.0% | |
| TGAATCTGGCCACATGGCAA+GGG | + | chr4.2:34827445-34827464 | MS.gene90981:intron | 50.0% | |
| TGCTACAGCTGTGGTGAATC+TGG | + | chr4.2:34827542-34827561 | MS.gene90981:intron | 50.0% | |
| ! | CCTGATGGTGCTTCTGTTCA+AGG | + | chr4.2:34827206-34827225 | MS.gene90981:intron | 50.0% |
| ! | TATGGAGGAGGTGGTGGTTA+TGG | + | chr4.2:34827365-34827384 | MS.gene90981:intron | 50.0% |
| !! | CCTTGAACAGAAGCACCATC+AGG | - | chr4.2:34827209-34827228 | None:intergenic | 50.0% |
| !! | GGTGGTGGATGTTACAACTG+TGG | + | chr4.2:34827422-34827441 | MS.gene90981:intron | 50.0% |
| CTGTGGTGAATCTGGCCACA+TGG | + | chr4.2:34827439-34827458 | MS.gene90981:intron | 55.0% | |
| GGAGGTGGTTATGAACGTGG+TGG | + | chr4.2:34827254-34827273 | MS.gene90981:intron | 55.0% | |
| GGTGGAGGTGGTTATGAACG+TGG | + | chr4.2:34827251-34827270 | MS.gene90981:intron | 55.0% | |
| GGTGGTTATGAACGTGGTGG+TGG | + | chr4.2:34827257-34827276 | MS.gene90981:intron | 55.0% | |
| GTGAATCTGGCCACATGGCA+AGG | + | chr4.2:34827444-34827463 | MS.gene90981:intron | 55.0% | |
| TGGTACACTCCCTTGCCATG+TGG | - | chr4.2:34827457-34827476 | None:intergenic | 55.0% | |
| ! | ATGGCAAGGGAGTGTACCAG+CGG | + | chr4.2:34827458-34827477 | MS.gene90981:intron | 55.0% |
| ! | GGATTCCGCTCACTTGCTGA+AGG | + | chr4.2:34827116-34827135 | MS.gene90981:CDS | 55.0% |
| ! | GGTGGTGGTTATGGTGGAAG+AGG | + | chr4.2:34827311-34827330 | MS.gene90981:intron | 55.0% |
| ! | GGTGGTTATGGTGGAAGAGG+AGG | + | chr4.2:34827314-34827333 | MS.gene90981:intron | 55.0% |
| ! | GGTTATGGTGGAAGAGGAGG+TGG | + | chr4.2:34827317-34827336 | MS.gene90981:intron | 55.0% |
| ! | GTGAGCGGAATCCATCGGTT+TGG | - | chr4.2:34827109-34827128 | None:intergenic | 55.0% |
| ! | TATGGTGGAAGAGGAGGTGG+TGG | + | chr4.2:34827320-34827339 | MS.gene90981:intron | 55.0% |
| !! | ATGGTGGTGGTGGAAGAGGT+GGG | + | chr4.2:34827384-34827403 | MS.gene90981:intron | 55.0% |
| !! | CACCCCTGATGATGGAAGTG+AGG | + | chr4.2:34827058-34827077 | MS.gene90981:CDS | 55.0% |
| !! | GAACGTGGTGGTGGTGGTTA+CGG | + | chr4.2:34827266-34827285 | MS.gene90981:intron | 55.0% |
| !! | GGTTATGAACGTGGTGGTGG+TGG | + | chr4.2:34827260-34827279 | MS.gene90981:intron | 55.0% |
| !! | GGTTATGGTGGTGGTGGAAG+AGG | + | chr4.2:34827380-34827399 | MS.gene90981:intron | 55.0% |
| !! | TATGGTGGTGGTGGAAGAGG+TGG | + | chr4.2:34827383-34827402 | MS.gene90981:intron | 55.0% |
| GGAGGTGGAGGTGGTTATGG+AGG | + | chr4.2:34827350-34827369 | MS.gene90981:intron | 60.0% | |
| GGAGGTGGTTATGGAGGAGG+TGG | + | chr4.2:34827356-34827375 | MS.gene90981:intron | 60.0% | |
| GGTGGAAGCTGCTACAGCTG+TGG | + | chr4.2:34827533-34827552 | MS.gene90981:intron | 60.0% | |
| GGTGGAGGTGGAGGTGGTTA+TGG | + | chr4.2:34827347-34827366 | MS.gene90981:intron | 60.0% | |
| GGTGGAGGTGGTTATGGAGG+AGG | + | chr4.2:34827353-34827372 | MS.gene90981:intron | 60.0% | |
| GGTGGTTATGGAGGAGGTGG+TGG | + | chr4.2:34827359-34827378 | MS.gene90981:intron | 60.0% | |
| GTTCAAGGATCGAGACGCGG+AGG | + | chr4.2:34827221-34827240 | MS.gene90981:intron | 60.0% | |
| ! | AGAGGAGGTGGTGGCTATGG+TGG | + | chr4.2:34827329-34827348 | MS.gene90981:intron | 60.0% |
| ! | CTTCAACGAGCGCTGCCTGT+TGG | - | chr4.2:34827587-34827606 | None:intergenic | 60.0% |
| ! | GGAAGAGGAGGTGGTGGCTA+TGG | + | chr4.2:34827326-34827345 | MS.gene90981:intron | 60.0% |
| ! | GGAAGGTATGGAGGTGGTGG+TGG | + | chr4.2:34827497-34827516 | MS.gene90981:intron | 60.0% |
| ! | GGAGGAGGTGGTGGTTATGG+TGG | + | chr4.2:34827368-34827387 | MS.gene90981:intron | 60.0% |
| ! | GGAGGTGGTGGTTATGGTGG+TGG | + | chr4.2:34827308-34827327 | MS.gene90981:intron | 60.0% |
| ! | GGTGGAAGGTATGGAGGTGG+TGG | + | chr4.2:34827494-34827513 | MS.gene90981:intron | 60.0% |
| ! | GGTGGAGGTGGTGGTTATGG+TGG | + | chr4.2:34827305-34827324 | MS.gene90981:intron | 60.0% |
| !! | AGGTATGGAGGTGGTGGTGG+TGG | + | chr4.2:34827500-34827519 | MS.gene90981:intron | 60.0% |
| !! | GGTGGTGGAGGTGGTGGTTA+TGG | + | chr4.2:34827302-34827321 | MS.gene90981:intron | 60.0% |
| !! | GGTGGTGGTTATGGTGGTGG+TGG | + | chr4.2:34827374-34827393 | MS.gene90981:intron | 60.0% |
| !! | GGTTACGGTGGTGGCGGTTA+TGG | + | chr4.2:34827281-34827300 | MS.gene90981:intron | 60.0% |
| !! | GGTTATGGTGGTGGAGGTGG+TGG | + | chr4.2:34827296-34827315 | MS.gene90981:intron | 60.0% |
| !! | TACGGTGGTGGCGGTTATGG+TGG | + | chr4.2:34827284-34827303 | MS.gene90981:intron | 60.0% |
| !! | TATGGAGGTGGTGGTGGTGG+AGG | + | chr4.2:34827503-34827522 | MS.gene90981:intron | 60.0% |
| !! | TGGTGGTGGTGGAAGAGGTG+GGG | + | chr4.2:34827385-34827404 | MS.gene90981:intron | 60.0% |
| ATCCACCACCGCCTCCTCCA+CGG | - | chr4.2:34827412-34827431 | None:intergenic | 65.0% | |
| CAAGGATCGAGACGCGGAGG+CGG | + | chr4.2:34827224-34827243 | MS.gene90981:intron | 65.0% | |
| GAGTGTACCAGCGGTGGAGG+TGG | + | chr4.2:34827467-34827486 | MS.gene90981:intron | 65.0% | |
| TGTACCAGCGGTGGAGGTGG+TGG | + | chr4.2:34827470-34827489 | MS.gene90981:intron | 65.0% | |
| ! | AGGGAGTGTACCAGCGGTGG+AGG | + | chr4.2:34827464-34827483 | MS.gene90981:intron | 65.0% |
| ! | GCAAGGGAGTGTACCAGCGG+TGG | + | chr4.2:34827461-34827480 | MS.gene90981:intron | 65.0% |
| ! | GGAGGTGGTGGCTATGGTGG+AGG | + | chr4.2:34827332-34827351 | MS.gene90981:intron | 65.0% |
| ! | GGCGGTGGAAGGTATGGAGG+TGG | + | chr4.2:34827491-34827510 | MS.gene90981:intron | 65.0% |
| ! | GGCTATGGTGGAGGTGGAGG+TGG | + | chr4.2:34827341-34827360 | MS.gene90981:intron | 65.0% |
| ! | GGTGGCGGTGGAAGGTATGG+AGG | + | chr4.2:34827488-34827507 | MS.gene90981:intron | 65.0% |
| ! | GGTGGCTATGGTGGAGGTGG+AGG | + | chr4.2:34827338-34827357 | MS.gene90981:intron | 65.0% |
| ! | GGTGGTGGCTATGGTGGAGG+TGG | + | chr4.2:34827335-34827354 | MS.gene90981:intron | 65.0% |
| ! | GGTGGTGGTTACGGTGGTGG+CGG | + | chr4.2:34827275-34827294 | MS.gene90981:intron | 65.0% |
| !! | CGTGGTGGTGGTGGTTACGG+TGG | + | chr4.2:34827269-34827288 | MS.gene90981:intron | 65.0% |
| !! | GGCGGTTATGGTGGTGGAGG+TGG | + | chr4.2:34827293-34827312 | MS.gene90981:intron | 65.0% |
| !! | GGTGGCGGTTATGGTGGTGG+AGG | + | chr4.2:34827290-34827309 | MS.gene90981:intron | 65.0% |
| !! | GGTGGTGGCGGTGGAAGGTA+TGG | + | chr4.2:34827485-34827504 | MS.gene90981:intron | 65.0% |
| !! | GGTGGTGGCGGTTATGGTGG+TGG | + | chr4.2:34827287-34827306 | MS.gene90981:intron | 65.0% |
| !! | GGTGGTGGTGGAAGAGGTGG+GGG | + | chr4.2:34827386-34827405 | MS.gene90981:intron | 65.0% |
| !! | GGTGGTGGTGGTTACGGTGG+TGG | + | chr4.2:34827272-34827291 | MS.gene90981:intron | 65.0% |
| ! | ACCAGCGGTGGAGGTGGTGG+CGG | + | chr4.2:34827473-34827492 | MS.gene90981:intron | 70.0% |
| !! | GGTGGTGGTGGAGGCAGTGG+CGG | + | chr4.2:34827512-34827531 | MS.gene90981:intron | 70.0% |
| !! | GGTGGTGGTGGTGGAGGCAG+TGG | + | chr4.2:34827509-34827528 | MS.gene90981:intron | 70.0% |
| !! | GTGGAGGTGGTGGCGGTGGA+AGG | + | chr4.2:34827480-34827499 | MS.gene90981:intron | 70.0% |
| ACCGCCACCACCTCCACCGC+TGG | - | chr4.2:34827477-34827496 | None:intergenic | 75.0% | |
| AGAGGTGGGGGCCGTGGAGG+AGG | + | chr4.2:34827398-34827417 | MS.gene90981:intron | 75.0% | |
| GGAAGAGGTGGGGGCCGTGG+AGG | + | chr4.2:34827395-34827414 | MS.gene90981:intron | 75.0% | |
| GGATCGAGACGCGGAGGCGG+TGG | + | chr4.2:34827227-34827246 | MS.gene90981:intron | 75.0% | |
| GGTGGAAGAGGTGGGGGCCG+TGG | + | chr4.2:34827392-34827411 | MS.gene90981:intron | 75.0% | |
| TCGAGACGCGGAGGCGGTGG+TGG | + | chr4.2:34827230-34827249 | MS.gene90981:intron | 75.0% | |
| ! | AGACGCGGAGGCGGTGGTGG+TGG | + | chr4.2:34827233-34827252 | MS.gene90981:intron | 75.0% |
| !! | AGCGGTGGAGGTGGTGGCGG+TGG | + | chr4.2:34827476-34827495 | MS.gene90981:intron | 75.0% |
| !! | GGAGGCGGTGGTGGTGGAGG+TGG | + | chr4.2:34827239-34827258 | MS.gene90981:intron | 75.0% |
| !! | GGTGGTGGAGGCAGTGGCGG+TGG | + | chr4.2:34827515-34827534 | MS.gene90981:intron | 75.0% |
| ! | GGCCGTGGAGGAGGCGGTGG+TGG | + | chr4.2:34827407-34827426 | MS.gene90981:intron | 80.0% |
| ! | GGTGGGGGCCGTGGAGGAGG+CGG | + | chr4.2:34827401-34827420 | MS.gene90981:intron | 80.0% |
| !!! | CGCGGAGGCGGTGGTGGTGG+AGG | + | chr4.2:34827236-34827255 | MS.gene90981:intron | 80.0% |
| ! | GGGGGCCGTGGAGGAGGCGG+TGG | + | chr4.2:34827404-34827423 | MS.gene90981:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 34826993 | 34827632 | 34826993 | ID=MS.gene90981 |
| chr4.2 | mRNA | 34826993 | 34827632 | 34826993 | ID=MS.gene90981.t1;Parent=MS.gene90981 |
| chr4.2 | exon | 34826993 | 34827212 | 34826993 | ID=MS.gene90981.t1.exon1;Parent=MS.gene90981.t1 |
| chr4.2 | CDS | 34826993 | 34827212 | 34826993 | ID=cds.MS.gene90981.t1;Parent=MS.gene90981.t1 |
| chr4.2 | exon | 34827550 | 34827632 | 34827550 | ID=MS.gene90981.t1.exon2;Parent=MS.gene90981.t1 |
| chr4.2 | CDS | 34827550 | 34827632 | 34827550 | ID=cds.MS.gene90981.t1;Parent=MS.gene90981.t1 |
| Gene Sequence |
| Protein sequence |
