Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91203.t1 | XP_003596650.1 | 100 | 114 | 0 | 0 | 1 | 114 | 1 | 114 | 7.50E-57 | 229.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91203.t1 | A6MZM2 | 89.6 | 115 | 11 | 1 | 1 | 114 | 1 | 115 | 1.2e-52 | 206.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91203.t1 | G7IJN1 | 100.0 | 114 | 0 | 0 | 1 | 114 | 1 | 114 | 5.4e-57 | 229.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene91203 | -0.836626 | 8.38E-57 | -1.69E-46 |
| MS.gene04918 | MS.gene91203 | 0.835932 | 1.26E-56 | -1.69E-46 |
| MS.gene04919 | MS.gene91203 | 0.804907 | 1.72E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene91203 | 0.820429 | 6.89E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene91203 | 0.80678 | 6.96E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene91203 | 0.804824 | 1.79E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene91203 | 0.830004 | 3.75E-55 | -1.69E-46 |
| MS.gene049411 | MS.gene91203 | 0.898912 | 3.33E-77 | -1.69E-46 |
| MS.gene049499 | MS.gene91203 | 0.806123 | 9.58E-50 | -1.69E-46 |
| MS.gene049580 | MS.gene91203 | 0.815843 | 7.51E-52 | -1.69E-46 |
| MS.gene049680 | MS.gene91203 | 0.860183 | 2.47E-63 | -1.69E-46 |
| MS.gene049807 | MS.gene91203 | 0.834492 | 2.90E-56 | -1.69E-46 |
| MS.gene05029 | MS.gene91203 | 0.834933 | 2.25E-56 | -1.69E-46 |
| MS.gene050414 | MS.gene91203 | 0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene050437 | MS.gene91203 | 0.839698 | 1.36E-57 | -1.69E-46 |
| MS.gene050646 | MS.gene91203 | 0.822524 | 2.26E-53 | -1.69E-46 |
| MS.gene050689 | MS.gene91203 | 0.841046 | 6.02E-58 | -1.69E-46 |
| MS.gene050752 | MS.gene91203 | 0.906804 | 1.00E-80 | -1.69E-46 |
| MS.gene050838 | MS.gene91203 | 0.824001 | 1.02E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene91203 | 0.866009 | 3.90E-65 | -1.69E-46 |
| MS.gene050955 | MS.gene91203 | 0.903169 | 4.58E-79 | -1.69E-46 |
| MS.gene050985 | MS.gene91203 | 0.822027 | 2.95E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene91203 | 0.869986 | 2.05E-66 | -1.69E-46 |
| MS.gene051043 | MS.gene91203 | 0.863433 | 2.50E-64 | -1.69E-46 |
| MS.gene051234 | MS.gene91203 | 0.895615 | 8.10E-76 | -1.69E-46 |
| MS.gene051343 | MS.gene91203 | 0.848897 | 4.57E-60 | -1.69E-46 |
| MS.gene051365 | MS.gene91203 | 0.804639 | 1.96E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene91203 | 0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene051676 | MS.gene91203 | 0.804208 | 2.41E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene91203 | 0.81892 | 1.52E-52 | -1.69E-46 |
| MS.gene051731 | MS.gene91203 | 0.826376 | 2.81E-54 | -1.69E-46 |
| MS.gene051856 | MS.gene91203 | 0.801488 | 8.79E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene91203 | 0.833729 | 4.51E-56 | -1.69E-46 |
| MS.gene051975 | MS.gene91203 | 0.821789 | 3.35E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene91203 | 0.899723 | 1.49E-77 | -1.69E-46 |
| MS.gene052296 | MS.gene91203 | 0.85649 | 3.11E-62 | -1.69E-46 |
| MS.gene052307 | MS.gene91203 | 0.812665 | 3.78E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene91203 | 0.82307 | 1.69E-53 | -1.69E-46 |
| MS.gene052479 | MS.gene91203 | 0.828478 | 8.79E-55 | -1.69E-46 |
| MS.gene052533 | MS.gene91203 | 0.839886 | 1.21E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene91203 | 0.863162 | 3.03E-64 | -1.69E-46 |
| MS.gene052947 | MS.gene91203 | 0.824527 | 7.69E-54 | -1.69E-46 |
| MS.gene053045 | MS.gene91203 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene053228 | MS.gene91203 | 0.821895 | 3.17E-53 | -1.69E-46 |
| MS.gene053590 | MS.gene91203 | 0.807179 | 5.73E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene91203 | 0.824557 | 7.57E-54 | -1.69E-46 |
| MS.gene053879 | MS.gene91203 | 0.839187 | 1.84E-57 | -1.69E-46 |
| MS.gene053931 | MS.gene91203 | 0.816799 | 4.59E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene91203 | 0.888062 | 8.24E-73 | -1.69E-46 |
| MS.gene054005 | MS.gene91203 | 0.851405 | 9.06E-61 | -1.69E-46 |
| MS.gene054142 | MS.gene91203 | 0.815602 | 8.50E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene91203 | 0.909592 | 4.80E-82 | -1.69E-46 |
| MS.gene054413 | MS.gene91203 | 0.848419 | 6.20E-60 | -1.69E-46 |
| MS.gene05469 | MS.gene91203 | 0.840494 | 8.41E-58 | -1.69E-46 |
| MS.gene054709 | MS.gene91203 | 0.829016 | 6.52E-55 | -1.69E-46 |
| MS.gene055150 | MS.gene91203 | 0.827413 | 1.59E-54 | -1.69E-46 |
| MS.gene055221 | MS.gene91203 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene055339 | MS.gene91203 | 0.841991 | 3.40E-58 | -1.69E-46 |
| MS.gene055555 | MS.gene91203 | 0.81819 | 2.23E-52 | -1.69E-46 |
| MS.gene055765 | MS.gene91203 | 0.851907 | 6.53E-61 | -1.69E-46 |
| MS.gene056082 | MS.gene91203 | 0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene05648 | MS.gene91203 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene91203 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene056693 | MS.gene91203 | 0.827538 | 1.48E-54 | -1.69E-46 |
| MS.gene056699 | MS.gene91203 | 0.828053 | 1.11E-54 | -1.69E-46 |
| MS.gene056881 | MS.gene91203 | 0.839439 | 1.58E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene91203 | 0.82001 | 8.60E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene91203 | 0.885255 | 9.52E-72 | -1.69E-46 |
| MS.gene057208 | MS.gene91203 | 0.806911 | 6.54E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene91203 | 0.865161 | 7.21E-65 | -1.69E-46 |
| MS.gene057705 | MS.gene91203 | 0.854162 | 1.48E-61 | -1.69E-46 |
| MS.gene05781 | MS.gene91203 | 0.803472 | 3.43E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene91203 | 0.828857 | 7.12E-55 | -1.69E-46 |
| MS.gene058008 | MS.gene91203 | 0.833383 | 5.51E-56 | -1.69E-46 |
| MS.gene058074 | MS.gene91203 | 0.8086 | 2.86E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene91203 | 0.843707 | 1.19E-58 | -1.69E-46 |
| MS.gene058245 | MS.gene91203 | 0.835806 | 1.35E-56 | -1.69E-46 |
| MS.gene058261 | MS.gene91203 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene91203 | 0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene058783 | MS.gene91203 | 0.810492 | 1.12E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene91203 | 0.86366 | 2.12E-64 | -1.69E-46 |
| MS.gene059227 | MS.gene91203 | 0.841865 | 3.67E-58 | -1.69E-46 |
| MS.gene059778 | MS.gene91203 | 0.820927 | 5.30E-53 | -1.69E-46 |
| MS.gene059802 | MS.gene91203 | 0.863974 | 1.70E-64 | -1.69E-46 |
| MS.gene05985 | MS.gene91203 | -0.863587 | 2.24E-64 | -1.69E-46 |
| MS.gene059949 | MS.gene91203 | 0.812116 | 4.98E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene91203 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene91203 | 0.855596 | 5.67E-62 | -1.69E-46 |
| MS.gene060763 | MS.gene91203 | 0.835006 | 2.16E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene91203 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene060935 | MS.gene91203 | 0.858649 | 7.13E-63 | -1.69E-46 |
| MS.gene060937 | MS.gene91203 | 0.858885 | 6.06E-63 | -1.69E-46 |
| MS.gene061100 | MS.gene91203 | 0.850946 | 1.22E-60 | -1.69E-46 |
| MS.gene061160 | MS.gene91203 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene91203 | 0.829201 | 5.88E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91203.t1 | MTR_2g083180 | 100.000 | 114 | 0 | 0 | 1 | 114 | 1 | 114 | 1.67e-82 | 236 |
| MS.gene91203.t1 | MTR_2g083180 | 96.262 | 107 | 4 | 0 | 8 | 114 | 10 | 116 | 2.99e-73 | 213 |
| MS.gene91203.t1 | MTR_4g046733 | 87.719 | 114 | 13 | 1 | 1 | 114 | 1 | 113 | 3.69e-72 | 210 |
| MS.gene91203.t1 | MTR_2g083180 | 91.228 | 114 | 8 | 1 | 1 | 112 | 1 | 114 | 1.32e-71 | 209 |
| MS.gene91203.t1 | MTR_2g083180 | 100.000 | 100 | 0 | 0 | 1 | 100 | 1 | 100 | 1.40e-71 | 209 |
| MS.gene91203.t1 | MTR_3g051950 | 77.193 | 114 | 24 | 1 | 1 | 114 | 1 | 112 | 3.86e-60 | 180 |
| MS.gene91203.t1 | MTR_2g083180 | 100.000 | 83 | 0 | 0 | 1 | 83 | 1 | 83 | 2.71e-58 | 175 |
| MS.gene91203.t1 | MTR_5g092820 | 72.973 | 111 | 28 | 1 | 4 | 114 | 2 | 110 | 1.86e-55 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91203.t1 | AT4G27130 | 86.842 | 114 | 14 | 1 | 1 | 114 | 1 | 113 | 9.73e-72 | 209 |
| MS.gene91203.t1 | AT5G54760 | 85.965 | 114 | 15 | 1 | 1 | 114 | 1 | 113 | 4.83e-71 | 207 |
| MS.gene91203.t1 | AT5G54760 | 85.965 | 114 | 15 | 1 | 1 | 114 | 1 | 113 | 4.83e-71 | 207 |
| MS.gene91203.t1 | AT5G54760 | 85.965 | 114 | 15 | 1 | 1 | 114 | 1 | 113 | 4.83e-71 | 207 |
| MS.gene91203.t1 | AT5G54760 | 85.965 | 114 | 15 | 1 | 1 | 114 | 1 | 113 | 4.83e-71 | 207 |
| MS.gene91203.t1 | AT1G54290 | 85.088 | 114 | 16 | 1 | 1 | 114 | 1 | 113 | 2.45e-70 | 206 |
| MS.gene91203.t1 | AT5G54940 | 74.561 | 114 | 27 | 1 | 1 | 114 | 1 | 112 | 2.95e-58 | 175 |
| MS.gene91203.t1 | AT5G54940 | 74.561 | 114 | 27 | 1 | 1 | 114 | 1 | 112 | 2.95e-58 | 175 |
| MS.gene91203.t1 | AT5G54940 | 74.561 | 114 | 27 | 1 | 1 | 114 | 1 | 112 | 2.95e-58 | 175 |
Find 25 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCTGAGGACGCCGGTGC+TGG | 0.285317 | 2.3:+14504150 | MS.gene91203:CDS |
| AAGGAGCATATTAAAATTCA+TGG | 0.292939 | 2.3:+14505436 | MS.gene91203:CDS |
| TTCGCTGCTGTATACGAATA+TGG | 0.326573 | 2.3:-14504191 | None:intergenic |
| ATTCATTACCTGGACTAAAA+AGG | 0.327921 | 2.3:-14504460 | None:intergenic |
| CCTGTCCTTGCTCTGGGTCC+TGG | 0.375764 | 2.3:-14504320 | None:intergenic |
| AGACATACCTGTCCTTGCTC+TGG | 0.415595 | 2.3:-14504327 | None:intergenic |
| TACAACAAAACTCCTTCTTA+AGG | 0.416659 | 2.3:-14504284 | None:intergenic |
| GACATACCTGTCCTTGCTCT+GGG | 0.463686 | 2.3:-14504326 | None:intergenic |
| TGAATTCTTTCTTCAATCCC+TGG | 0.465760 | 2.3:-14504239 | None:intergenic |
| GTGTAGGTTATTCAACTTCA+AGG | 0.470369 | 2.3:+14504414 | MS.gene91203:intron |
| TTGTAATGGTACAGTTGTCC+AGG | 0.470439 | 2.3:+14504302 | MS.gene91203:CDS |
| ATGCTGAGGACGCCGGTGCT+GGG | 0.477491 | 2.3:+14504151 | MS.gene91203:CDS |
| TCAGCATTTGCCTCAGCAAA+AGG | 0.478903 | 2.3:-14504135 | None:intergenic |
| ATTCGTATACAGCAGCGAAA+TGG | 0.491023 | 2.3:+14504195 | MS.gene91203:CDS |
| CGCCGGTGCTGGGTCATCAA+AGG | 0.522725 | 2.3:+14504161 | MS.gene91203:CDS |
| ACAGGCTGGAATCGTGAAGA+AGG | 0.545416 | 2.3:+14505417 | MS.gene91203:intron |
| AAAAGCTTGACAACTGTCCA+GGG | 0.558576 | 2.3:+14504222 | MS.gene91203:CDS |
| TTCAACTTCAAGGCGATCAG+AGG | 0.577444 | 2.3:+14504424 | MS.gene91203:CDS |
| GAGGCAAATGCTGAGGACGC+CGG | 0.578099 | 2.3:+14504144 | MS.gene91203:CDS |
| CTCCTTTGATGACCCAGCAC+CGG | 0.583753 | 2.3:-14504163 | None:intergenic |
| GATTCTGAAAGACCTTAAGA+AGG | 0.584832 | 2.3:+14504272 | MS.gene91203:CDS |
| CCAGGACCCAGAGCAAGGAC+AGG | 0.587475 | 2.3:+14504320 | MS.gene91203:CDS |
| GCACAAATTCCTACTGCCTA+CGG | 0.609588 | 2.3:+14503179 | MS.gene91203:CDS |
| GTTGTCCAGGACCCAGAGCA+AGG | 0.630590 | 2.3:+14504315 | MS.gene91203:CDS |
| TCCAACTTACCGTAGGCAGT+AGG | 0.690363 | 2.3:-14503188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATAAGTAAAAAAAAAAT+AGG | - | chr2.3:14503614-14503633 | None:intergenic | 10.0% |
| !!! | TTTGAATTTTTATTATCTTT+AGG | + | chr2.3:14503377-14503396 | MS.gene91203:intron | 10.0% |
| !! | AGAAAATATCAAAAGTAAAA+CGG | - | chr2.3:14504591-14504610 | None:intergenic | 15.0% |
| !! | TAAACATAAAATAATGTCAA+AGG | - | chr2.3:14504818-14504837 | None:intergenic | 15.0% |
| !! | TTTACCCATAAATTTATATT+TGG | + | chr2.3:14505109-14505128 | MS.gene91203:intron | 15.0% |
| !!! | AAATTGAATTTTTAAAGCTT+AGG | + | chr2.3:14503926-14503945 | MS.gene91203:intron | 15.0% |
| !!! | CTTCAAATAACATTTTTTTA+TGG | + | chr2.3:14504392-14504411 | MS.gene91203:intron | 15.0% |
| !!! | GTTTTTAATGTTTATACTTT+GGG | + | chr2.3:14503791-14503810 | MS.gene91203:intron | 15.0% |
| !!! | TTTCTAAAATAGTTTTTTCT+GGG | + | chr2.3:14503744-14503763 | MS.gene91203:intron | 15.0% |
| !!! | TTTTCTAAAATAGTTTTTTC+TGG | + | chr2.3:14503743-14503762 | MS.gene91203:intron | 15.0% |
| !! | AGTAAAACGGAAAAATAAAA+AGG | - | chr2.3:14504578-14504597 | None:intergenic | 20.0% |
| !! | ATCCACCAAATATAAATTTA+TGG | - | chr2.3:14505117-14505136 | None:intergenic | 20.0% |
| !! | GTAAAACGGAAAAATAAAAA+GGG | - | chr2.3:14504577-14504596 | None:intergenic | 20.0% |
| !! | TCCACCAAATATAAATTTAT+GGG | - | chr2.3:14505116-14505135 | None:intergenic | 20.0% |
| !!! | AAAAAGAAGTCTGATTTTAA+AGG | + | chr2.3:14504683-14504702 | MS.gene91203:intron | 20.0% |
| !!! | ATAACATTTTTTTATGGTGT+AGG | + | chr2.3:14504398-14504417 | MS.gene91203:intron | 20.0% |
| !!! | ATATTGCTTTTACTTTTACT+TGG | + | chr2.3:14503575-14503594 | MS.gene91203:intron | 20.0% |
| !!! | ATCAACTATTTTTACTAAAC+AGG | + | chr2.3:14504915-14504934 | MS.gene91203:intron | 20.0% |
| !!! | GGTTTTTAATGTTTATACTT+TGG | + | chr2.3:14503790-14503809 | MS.gene91203:intron | 20.0% |
| !!! | GTAAAAATAGTTGATATTCT+AGG | - | chr2.3:14504910-14504929 | None:intergenic | 20.0% |
| !!! | TCAACTATTTTTACTAAACA+GGG | + | chr2.3:14504916-14504935 | MS.gene91203:intron | 20.0% |
| !!! | TTCTAAAATAGTTTTTTCTG+GGG | + | chr2.3:14503745-14503764 | MS.gene91203:intron | 20.0% |
| !!! | TTGATCTGAAATAGTATTTT+GGG | + | chr2.3:14503887-14503906 | MS.gene91203:intron | 20.0% |
| !!! | TTTACTTTTGATATTTTCTG+TGG | + | chr2.3:14504592-14504611 | MS.gene91203:intron | 20.0% |
| !!! | TTTGATCTGAAATAGTATTT+TGG | + | chr2.3:14503886-14503905 | MS.gene91203:intron | 20.0% |
| ! | ACCCATAAATTTATATTTGG+TGG | + | chr2.3:14505112-14505131 | MS.gene91203:intron | 25.0% |
| ! | AGATGAAGAATAGAAATAGA+TGG | + | chr2.3:14504017-14504036 | MS.gene91203:intron | 25.0% |
| ! | ATAGAAGAATTTCTCATTTC+TGG | - | chr2.3:14503484-14503503 | None:intergenic | 25.0% |
| ! | TATTCATGTCATTCATCATA+TGG | + | chr2.3:14505263-14505282 | MS.gene91203:intron | 25.0% |
| ! | TCAAAGTTATGTACAATGAT+TGG | - | chr2.3:14503871-14503890 | None:intergenic | 25.0% |
| ! | TTAAGCATCTTGTTCAATAA+TGG | - | chr2.3:14503842-14503861 | None:intergenic | 25.0% |
| ! | TTAATGAAAATAGAGCTGTT+TGG | + | chr2.3:14504742-14504761 | MS.gene91203:intron | 25.0% |
| ! | TTATTTGAATTAAGCATAGC+AGG | - | chr2.3:14504781-14504800 | None:intergenic | 25.0% |
| !! | AAATGTTATTTGAAGCAACA+AGG | - | chr2.3:14504387-14504406 | None:intergenic | 25.0% |
| !! | AAGGAGCATATTAAAATTCA+TGG | + | chr2.3:14505436-14505455 | MS.gene91203:CDS | 25.0% |
| !! | AATGTTATTTGAAGCAACAA+GGG | - | chr2.3:14504386-14504405 | None:intergenic | 25.0% |
| !!! | TGATCTGAAATAGTATTTTG+GGG | + | chr2.3:14503888-14503907 | MS.gene91203:intron | 25.0% |
| AAAAAATTCTGTGCGATTCT+TGG | - | chr2.3:14503726-14503745 | None:intergenic | 30.0% | |
| AATAAACGTTTGTCACTACA+TGG | - | chr2.3:14505247-14505266 | None:intergenic | 30.0% | |
| AATGAATGACTTCACATCTT+TGG | + | chr2.3:14504476-14504495 | MS.gene91203:intron | 30.0% | |
| AGAATATAACAGATCGTTGT+AGG | - | chr2.3:14505189-14505208 | None:intergenic | 30.0% | |
| ATATGATATATGACTCCTGT+GGG | + | chr2.3:14504090-14504109 | MS.gene91203:intron | 30.0% | |
| ATTCATTACCTGGACTAAAA+AGG | - | chr2.3:14504463-14504482 | None:intergenic | 30.0% | |
| CAATTATACTGTGTACTGTT+GGG | + | chr2.3:14503306-14503325 | MS.gene91203:intron | 30.0% | |
| GAATTTACTAGTCAATTGTC+AGG | - | chr2.3:14503418-14503437 | None:intergenic | 30.0% | |
| GATTTAGATACGTAAATCAC+TGG | + | chr2.3:14505155-14505174 | MS.gene91203:intron | 30.0% | |
| TACAACAAAACTCCTTCTTA+AGG | - | chr2.3:14504287-14504306 | None:intergenic | 30.0% | |
| TATCTAAATCCGTTCTATAG+AGG | - | chr2.3:14505145-14505164 | None:intergenic | 30.0% | |
| TCAATTATACTGTGTACTGT+TGG | + | chr2.3:14503305-14503324 | MS.gene91203:intron | 30.0% | |
| ! | AATTTTAGATCCTTTTGCTG+AGG | + | chr2.3:14504125-14504144 | MS.gene91203:intron | 30.0% |
| ! | ATGTTATTTGAAGCAACAAG+GGG | - | chr2.3:14504385-14504404 | None:intergenic | 30.0% |
| !! | AATAAAAAGGGTACTTAACC+AGG | - | chr2.3:14504565-14504584 | None:intergenic | 30.0% |
| !! | ATAAAAAGGGTACTTAACCA+GGG | - | chr2.3:14504564-14504583 | None:intergenic | 30.0% |
| !!! | AAGAAGGAGTTTTGTTGTAA+TGG | + | chr2.3:14504288-14504307 | MS.gene91203:CDS | 30.0% |
| AAGGCATATGCTTAGCTTAT+TGG | + | chr2.3:14504702-14504721 | MS.gene91203:intron | 35.0% | |
| AGGATCTTAACGTTTGTGAA+GGG | + | chr2.3:14503946-14503965 | MS.gene91203:intron | 35.0% | |
| ATGTGAAGTCATTCATTACC+TGG | - | chr2.3:14504473-14504492 | None:intergenic | 35.0% | |
| GATATGATATATGACTCCTG+TGG | + | chr2.3:14504089-14504108 | MS.gene91203:intron | 35.0% | |
| GTAAGAAAGCAACTCATTTC+TGG | - | chr2.3:14503553-14503572 | None:intergenic | 35.0% | |
| GTGTAGGTTATTCAACTTCA+AGG | + | chr2.3:14504414-14504433 | MS.gene91203:intron | 35.0% | |
| TACATAATGAATGCTGTGTG+AGG | - | chr2.3:14503998-14504017 | None:intergenic | 35.0% | |
| TAGGATCTTAACGTTTGTGA+AGG | + | chr2.3:14503945-14503964 | MS.gene91203:intron | 35.0% | |
| TATTCATGCCTTTCATTGCA+TGG | + | chr2.3:14505306-14505325 | MS.gene91203:intron | 35.0% | |
| TGAATTCTTTCTTCAATCCC+TGG | - | chr2.3:14504242-14504261 | None:intergenic | 35.0% | |
| TTCAAATTCACAAGTGCAGA+GGG | - | chr2.3:14505398-14505417 | None:intergenic | 35.0% | |
| TTCATGATATGCAGTCATTC+TGG | + | chr2.3:14503262-14503281 | MS.gene91203:intron | 35.0% | |
| ! | ATATGCAGTCATTCTGGAAA+GGG | + | chr2.3:14503268-14503287 | MS.gene91203:intron | 35.0% |
| ! | GATTCTGAAAGACCTTAAGA+AGG | + | chr2.3:14504272-14504291 | MS.gene91203:CDS | 35.0% |
| ! | GCTTAACGTGGTTTAAGATT+GGG | + | chr2.3:14503769-14503788 | MS.gene91203:intron | 35.0% |
| ! | TCAGTTTTCCATGCAATGAA+AGG | - | chr2.3:14505317-14505336 | None:intergenic | 35.0% |
| ! | TGCTTAACGTGGTTTAAGAT+TGG | + | chr2.3:14503768-14503787 | MS.gene91203:intron | 35.0% |
| ! | TTTGTTAGCTTCTCAGCAAT+AGG | + | chr2.3:14504871-14504890 | MS.gene91203:intron | 35.0% |
| !! | AATCTGAGACAGCATTTTCA+AGG | - | chr2.3:14503334-14503353 | None:intergenic | 35.0% |
| !! | CATTTCTGGAGTTTAGTTGA+AGG | - | chr2.3:14503539-14503558 | None:intergenic | 35.0% |
| !!! | AATAGTATTTTGGGGTCTTG+AGG | + | chr2.3:14503896-14503915 | MS.gene91203:intron | 35.0% |
| !!! | GTGTTTTTTTCCTCCTGATT+GGG | + | chr2.3:14504946-14504965 | MS.gene91203:intron | 35.0% |
| !!! | TGTGTTTTTTTCCTCCTGAT+TGG | + | chr2.3:14504945-14504964 | MS.gene91203:intron | 35.0% |
| AAAAAGCTTGACAACTGTCC+AGG | + | chr2.3:14504221-14504240 | MS.gene91203:CDS | 40.0% | |
| AAAAGCTTGACAACTGTCCA+GGG | + | chr2.3:14504222-14504241 | MS.gene91203:CDS | 40.0% | |
| ACTTATAGAGTTGCCTTTCC+CGG | + | chr2.3:14505069-14505088 | MS.gene91203:intron | 40.0% | |
| ACTTGTGAATTTGAACAGGC+TGG | + | chr2.3:14505403-14505422 | MS.gene91203:intron | 40.0% | |
| AGGAGGAAAAAAACACACTG+AGG | - | chr2.3:14504942-14504961 | None:intergenic | 40.0% | |
| ATAGAGTTCCAACTTACCGT+AGG | - | chr2.3:14503198-14503217 | None:intergenic | 40.0% | |
| ATTCGTATACAGCAGCGAAA+TGG | + | chr2.3:14504195-14504214 | MS.gene91203:CDS | 40.0% | |
| CTGCACTTGTGAATTTGAAC+AGG | + | chr2.3:14505399-14505418 | MS.gene91203:intron | 40.0% | |
| GGATGTATGCCTCTATAGAA+CGG | + | chr2.3:14505133-14505152 | MS.gene91203:intron | 40.0% | |
| GTACAAGATCATTCCCAATC+AGG | - | chr2.3:14504962-14504981 | None:intergenic | 40.0% | |
| GTTCAAATTCACAAGTGCAG+AGG | - | chr2.3:14505399-14505418 | None:intergenic | 40.0% | |
| TACTTAACCAGGGAAACAGA+TGG | - | chr2.3:14504554-14504573 | None:intergenic | 40.0% | |
| TTCGCTGCTGTATACGAATA+TGG | - | chr2.3:14504194-14504213 | None:intergenic | 40.0% | |
| TTGTAATGGTACAGTTGTCC+AGG | + | chr2.3:14504302-14504321 | MS.gene91203:CDS | 40.0% | |
| ! | GATATGCAGTCATTCTGGAA+AGG | + | chr2.3:14503267-14503286 | MS.gene91203:intron | 40.0% |
| ! | TGTCTGAGATCAAGTTTCTC+TGG | + | chr2.3:14504635-14504654 | MS.gene91203:intron | 40.0% |
| !! | TGTGTCTACCTTTTTAGTCC+AGG | + | chr2.3:14504452-14504471 | MS.gene91203:CDS | 40.0% |
| !! | TTGGGTTTTATCGTGTGTGA+AGG | + | chr2.3:14503809-14503828 | MS.gene91203:intron | 40.0% |
| AAGACTGTTTACCCAAGTCC+CGG | - | chr2.3:14505091-14505110 | None:intergenic | 45.0% | |
| ATAAGTGCCAACCTGCTCAA+AGG | - | chr2.3:14505055-14505074 | None:intergenic | 45.0% | |
| CAAGATCATTCCCAATCAGG+AGG | - | chr2.3:14504959-14504978 | None:intergenic | 45.0% | |
| CTTATAGAGTTGCCTTTCCC+GGG | + | chr2.3:14505070-14505089 | MS.gene91203:intron | 45.0% | |
| GACAGACAACACGCATCAAT+AGG | - | chr2.3:14503227-14503246 | None:intergenic | 45.0% | |
| GCACAAATTCCTACTGCCTA+CGG | + | chr2.3:14503179-14503198 | MS.gene91203:CDS | 45.0% | |
| GTGGCGTAATTTGATCTGAG+TGG | + | chr2.3:14504611-14504630 | MS.gene91203:intron | 45.0% | |
| TCAGCATTTGCCTCAGCAAA+AGG | - | chr2.3:14504138-14504157 | None:intergenic | 45.0% | |
| TTCAACTTCAAGGCGATCAG+AGG | + | chr2.3:14504424-14504443 | MS.gene91203:CDS | 45.0% | |
| TTCACAAGTGCAGAGGGATA+AGG | - | chr2.3:14505392-14505411 | None:intergenic | 45.0% | |
| ! | TTTTGCTGAGGCAAATGCTG+AGG | + | chr2.3:14504137-14504156 | MS.gene91203:CDS | 45.0% |
| !!! | AGTATTTTGGGGTCTTGAGG+TGG | + | chr2.3:14503899-14503918 | MS.gene91203:intron | 45.0% |
| !!! | TTTTTCTGGGGTGCTTAACG+TGG | + | chr2.3:14503757-14503776 | MS.gene91203:intron | 45.0% |
| !! | TTATAAGTAAAAAAAAAATA+GGG | - | chr2.3:14503613-14503632 | None:intergenic | 5.0% |
| ACAGGCTGGAATCGTGAAGA+AGG | + | chr2.3:14505417-14505436 | MS.gene91203:intron | 50.0% | |
| AGACATACCTGTCCTTGCTC+TGG | - | chr2.3:14504330-14504349 | None:intergenic | 50.0% | |
| AGACTGTTTACCCAAGTCCC+GGG | - | chr2.3:14505090-14505109 | None:intergenic | 50.0% | |
| ATTGTTGCCACACATCCCAC+AGG | - | chr2.3:14504108-14504127 | None:intergenic | 50.0% | |
| CAGGGAAACAGATGGATCTC+AGG | - | chr2.3:14504546-14504565 | None:intergenic | 50.0% | |
| CTGAGATCCATCTGTTTCCC+TGG | + | chr2.3:14504544-14504563 | MS.gene91203:intron | 50.0% | |
| GACATACCTGTCCTTGCTCT+GGG | - | chr2.3:14504329-14504348 | None:intergenic | 50.0% | |
| TATGACTCCTGTGGGATGTG+TGG | + | chr2.3:14504098-14504117 | MS.gene91203:intron | 50.0% | |
| TCCAACTTACCGTAGGCAGT+AGG | - | chr2.3:14503191-14503210 | None:intergenic | 50.0% | |
| TCCTACTGCCTACGGTAAGT+TGG | + | chr2.3:14503187-14503206 | MS.gene91203:intron | 50.0% | |
| AGTTGCCTTTCCCGGGACTT+GGG | + | chr2.3:14505077-14505096 | MS.gene91203:intron | 55.0% | |
| CACCAGTCCTTTGAGCAGGT+TGG | + | chr2.3:14505045-14505064 | MS.gene91203:intron | 55.0% | |
| GTTTACCCAAGTCCCGGGAA+AGG | - | chr2.3:14505085-14505104 | None:intergenic | 55.0% | |
| TGCCAACCTGCTCAAAGGAC+TGG | - | chr2.3:14505050-14505069 | None:intergenic | 55.0% | |
| TTCGCACCAGTCCTTTGAGC+AGG | + | chr2.3:14505041-14505060 | MS.gene91203:intron | 55.0% | |
| ! | CTCCTTTGATGACCCAGCAC+CGG | - | chr2.3:14504166-14504185 | None:intergenic | 55.0% |
| GAGGCAAATGCTGAGGACGC+CGG | + | chr2.3:14504144-14504163 | MS.gene91203:CDS | 60.0% | |
| GAGTTGCCTTTCCCGGGACT+TGG | + | chr2.3:14505076-14505095 | MS.gene91203:intron | 60.0% | |
| GTTGTCCAGGACCCAGAGCA+AGG | + | chr2.3:14504315-14504334 | MS.gene91203:CDS | 60.0% | |
| AATGCTGAGGACGCCGGTGC+TGG | + | chr2.3:14504150-14504169 | MS.gene91203:CDS | 65.0% | |
| ATGCTGAGGACGCCGGTGCT+GGG | + | chr2.3:14504151-14504170 | MS.gene91203:CDS | 65.0% | |
| CCAGGACCCAGAGCAAGGAC+AGG | + | chr2.3:14504320-14504339 | MS.gene91203:CDS | 65.0% | |
| ! | CCTGTCCTTGCTCTGGGTCC+TGG | - | chr2.3:14504323-14504342 | None:intergenic | 65.0% |
| ! | CGCCGGTGCTGGGTCATCAA+AGG | + | chr2.3:14504161-14504180 | MS.gene91203:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 14503164 | 14505465 | 14503164 | ID=MS.gene91203 |
| chr2.3 | mRNA | 14503164 | 14505465 | 14503164 | ID=MS.gene91203.t1;Parent=MS.gene91203 |
| chr2.3 | exon | 14503164 | 14503200 | 14503164 | ID=MS.gene91203.t1.exon1;Parent=MS.gene91203.t1 |
| chr2.3 | CDS | 14503164 | 14503200 | 14503164 | ID=cds.MS.gene91203.t1;Parent=MS.gene91203.t1 |
| chr2.3 | exon | 14504133 | 14504341 | 14504133 | ID=MS.gene91203.t1.exon2;Parent=MS.gene91203.t1 |
| chr2.3 | CDS | 14504133 | 14504341 | 14504133 | ID=cds.MS.gene91203.t1;Parent=MS.gene91203.t1 |
| chr2.3 | exon | 14504420 | 14504473 | 14504420 | ID=MS.gene91203.t1.exon3;Parent=MS.gene91203.t1 |
| chr2.3 | CDS | 14504420 | 14504473 | 14504420 | ID=cds.MS.gene91203.t1;Parent=MS.gene91203.t1 |
| chr2.3 | exon | 14505421 | 14505465 | 14505421 | ID=MS.gene91203.t1.exon4;Parent=MS.gene91203.t1 |
| chr2.3 | CDS | 14505421 | 14505465 | 14505421 | ID=cds.MS.gene91203.t1;Parent=MS.gene91203.t1 |
| Gene Sequence |
| Protein sequence |
