Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009554.01.T01 | XP_039686569.1 | 97.068 | 307 | 9 | 0 | 1 | 307 | 1 | 307 | 0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009554.01.T01 | A0A396J889 | 97.068 | 307 | 9 | 0 | 1 | 307 | 1 | 307 | 0.0 | 619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048968.01 | MsG0280009554.01 | 0.832194 | 1.086653e-55 | 1.205748e-52 |
| MsG0180000611.01 | MsG0280009554.01 | 0.844133 | 9.128567e-59 | 1.459764e-55 |
| MsG0180001922.01 | MsG0280009554.01 | 0.808852 | 2.526482e-50 | 1.460272e-47 |
| MsG0180002140.01 | MsG0280009554.01 | 0.822647 | 2.118277e-53 | 1.783685e-50 |
| MsG0180002185.01 | MsG0280009554.01 | 0.807838 | 4.156707e-50 | 2.339433e-47 |
| MsG0180003303.01 | MsG0280009554.01 | 0.804012 | 2.649704e-49 | 1.351344e-46 |
| MsG0180003379.01 | MsG0280009554.01 | 0.866326 | 3.094115e-65 | 1.038784e-61 |
| MsG0180003567.01 | MsG0280009554.01 | 0.811678 | 6.207948e-51 | 3.866892e-48 |
| MsG0180004016.01 | MsG0280009554.01 | 0.845599 | 3.672526e-59 | 6.151725e-56 |
| MsG0180004128.01 | MsG0280009554.01 | 0.813085 | 3.059659e-51 | 1.978869e-48 |
| MsG0180004437.01 | MsG0280009554.01 | 0.813673 | 2.272139e-51 | 1.493312e-48 |
| MsG0180004684.01 | MsG0280009554.01 | 0.821265 | 4.426519e-53 | 3.583679e-50 |
| MsG0180005106.01 | MsG0280009554.01 | 0.846870 | 1.655153e-59 | 2.888695e-56 |
| MsG0180005268.01 | MsG0280009554.01 | 0.858524 | 7.766996e-63 | 1.987929e-59 |
| MsG0180005354.01 | MsG0280009554.01 | 0.818862 | 1.570526e-52 | 1.189526e-49 |
| MsG0180005509.01 | MsG0280009554.01 | 0.801017 | 1.097811e-48 | 5.187767e-46 |
| MsG0180005787.01 | MsG0280009554.01 | 0.835977 | 1.225506e-56 | 1.523072e-53 |
| MsG0180006046.01 | MsG0280009554.01 | 0.822012 | 2.974054e-53 | 2.459083e-50 |
| MsG0180006050.01 | MsG0280009554.01 | 0.841966 | 3.448624e-58 | 5.151412e-55 |
| MsG0280006519.01 | MsG0280009554.01 | 0.812030 | 5.204904e-51 | 3.272833e-48 |
| MsG0280006679.01 | MsG0280009554.01 | 0.810652 | 1.036271e-50 | 6.282327e-48 |
| MsG0280006682.01 | MsG0280009554.01 | 0.839617 | 1.423776e-57 | 1.976945e-54 |
| MsG0280006852.01 | MsG0280009554.01 | 0.817263 | 3.611339e-52 | 2.617233e-49 |
| MsG0280006892.01 | MsG0280009554.01 | 0.821599 | 3.706287e-53 | 3.028733e-50 |
| MsG0280006906.01 | MsG0280009554.01 | 0.821642 | 3.622779e-53 | 2.964161e-50 |
| MsG0280007011.01 | MsG0280009554.01 | 0.842762 | 2.121691e-58 | 3.249293e-55 |
| MsG0280007109.01 | MsG0280009554.01 | 0.820101 | 8.192067e-53 | 6.422632e-50 |
| MsG0280007441.01 | MsG0280009554.01 | 0.822953 | 1.797715e-53 | 1.526835e-50 |
| MsG0280007714.01 | MsG0280009554.01 | 0.820902 | 5.366440e-53 | 4.301440e-50 |
| MsG0280007775.01 | MsG0280009554.01 | 0.830897 | 2.266776e-55 | 2.420817e-52 |
| MsG0280008234.01 | MsG0280009554.01 | 0.810108 | 1.358154e-50 | 8.116359e-48 |
| MsG0280009270.01 | MsG0280009554.01 | 0.807386 | 5.183970e-50 | 2.883559e-47 |
| MsG0280009441.01 | MsG0280009554.01 | 0.825568 | 4.366907e-54 | 3.995063e-51 |
| MsG0280009552.01 | MsG0280009554.01 | 0.818109 | 2.326829e-52 | 1.725941e-49 |
| MsG0280009553.01 | MsG0280009554.01 | 0.912730 | 1.393400e-83 | 3.179938e-79 |
| MsG0280009554.01 | MsG0280010158.01 | 0.812246 | 4.668682e-51 | 2.953266e-48 |
| MsG0280009554.01 | MsG0280010411.01 | 0.825612 | 4.263983e-54 | 3.905844e-51 |
| MsG0280009554.01 | MsG0280010976.01 | 0.810836 | 9.456913e-51 | 5.761517e-48 |
| MsG0280009554.01 | MsG0280011287.01 | 0.859987 | 2.827182e-63 | 7.609905e-60 |
| MsG0280009554.01 | MsG0380011614.01 | 0.821580 | 3.743731e-53 | 3.057762e-50 |
| MsG0280009554.01 | MsG0380011927.01 | 0.800831 | 1.198432e-48 | 5.636163e-46 |
| MsG0280009554.01 | MsG0380013471.01 | 0.808143 | 3.579800e-50 | 2.031072e-47 |
| MsG0280009554.01 | MsG0380015220.01 | 0.825681 | 4.104582e-54 | 3.767333e-51 |
| MsG0280009554.01 | MsG0380015607.01 | 0.851267 | 9.921132e-61 | 1.997009e-57 |
| MsG0280009554.01 | MsG0380015614.01 | 0.805911 | 1.061966e-49 | 5.687173e-47 |
| MsG0280009554.01 | MsG0380016117.01 | 0.860276 | 2.312810e-63 | 6.286507e-60 |
| MsG0280009554.01 | MsG0380017003.01 | 0.808428 | 3.113025e-50 | 1.779512e-47 |
| MsG0280009554.01 | MsG0380017210.01 | 0.831552 | 1.564366e-55 | 1.703515e-52 |
| MsG0280009554.01 | MsG0380017215.01 | 0.815905 | 7.275291e-52 | 5.080286e-49 |
| MsG0280009554.01 | MsG0380017229.01 | 0.836749 | 7.798230e-57 | 9.920083e-54 |
| MsG0280009554.01 | MsG0380017279.01 | 0.846830 | 1.697711e-59 | 2.959269e-56 |
| MsG0280009554.01 | MsG0380017476.01 | 0.846383 | 2.248875e-59 | 3.863964e-56 |
| MsG0280009554.01 | MsG0380017511.01 | 0.824516 | 7.736985e-54 | 6.868671e-51 |
| MsG0280009554.01 | MsG0380017512.01 | 0.843473 | 1.371157e-58 | 2.147626e-55 |
| MsG0280009554.01 | MsG0380017914.01 | -0.805619 | 1.223168e-49 | 6.501256e-47 |
| MsG0280009554.01 | MsG0380018022.01 | 0.824293 | 8.731092e-54 | 7.700978e-51 |
| MsG0280009554.01 | MsG0480018235.01 | 0.809071 | 2.267850e-50 | 1.318543e-47 |
| MsG0280009554.01 | MsG0480018292.01 | 0.837386 | 5.358432e-57 | 6.948704e-54 |
| MsG0280009554.01 | MsG0480019289.01 | 0.820428 | 6.896122e-53 | 5.455221e-50 |
| MsG0280009554.01 | MsG0480020719.01 | 0.809661 | 1.694948e-50 | 1.001108e-47 |
| MsG0280009554.01 | MsG0480020843.01 | 0.804327 | 2.278605e-49 | 1.171486e-46 |
| MsG0280009554.01 | MsG0480021190.01 | 0.802987 | 4.322500e-49 | 2.147085e-46 |
| MsG0280009554.01 | MsG0480021432.01 | 0.810297 | 1.236570e-50 | 7.425787e-48 |
| MsG0280009554.01 | MsG0480021986.01 | 0.817842 | 2.673605e-52 | 1.968768e-49 |
| MsG0280009554.01 | MsG0480022246.01 | 0.810393 | 1.178629e-50 | 7.095934e-48 |
| MsG0280009554.01 | MsG0480022393.01 | -0.804215 | 2.404423e-49 | 1.232588e-46 |
| MsG0280009554.01 | MsG0480022897.01 | 0.815734 | 7.944146e-52 | 5.522000e-49 |
| MsG0280009554.01 | MsG0480023032.01 | 0.822715 | 2.042484e-53 | 1.723105e-50 |
| MsG0280009554.01 | MsG0480023143.01 | 0.827235 | 1.749863e-54 | 1.679391e-51 |
| MsG0280009554.01 | MsG0480023240.01 | 0.812305 | 4.531827e-51 | 2.871176e-48 |
| MsG0280009554.01 | MsG0480023396.01 | 0.816333 | 5.836612e-52 | 4.124093e-49 |
| MsG0280009554.01 | MsG0480023841.01 | -0.814424 | 1.551780e-51 | 1.040867e-48 |
| MsG0280009554.01 | MsG0580024536.01 | 0.817754 | 2.798960e-52 | 2.056141e-49 |
| MsG0280009554.01 | MsG0580024581.01 | 0.812420 | 4.278532e-51 | 2.719185e-48 |
| MsG0280009554.01 | MsG0580025042.01 | 0.802773 | 4.785908e-49 | 2.364540e-46 |
| MsG0280009554.01 | MsG0580025278.01 | 0.806194 | 9.261542e-50 | 4.995867e-47 |
| MsG0280009554.01 | MsG0580025497.01 | 0.820940 | 5.258344e-53 | 4.219308e-50 |
| MsG0280009554.01 | MsG0580028597.01 | 0.806078 | 9.793512e-50 | 5.267137e-47 |
| MsG0280009554.01 | MsG0580029231.01 | 0.808434 | 3.103409e-50 | 1.774318e-47 |
| MsG0280009554.01 | MsG0580029283.01 | 0.818623 | 1.779807e-52 | 1.338988e-49 |
| MsG0280009554.01 | MsG0580029628.01 | 0.826073 | 3.312911e-54 | 3.074704e-51 |
| MsG0280009554.01 | MsG0580029629.01 | 0.814152 | 1.782111e-51 | 1.186523e-48 |
| MsG0280009554.01 | MsG0580029639.01 | 0.813560 | 2.406452e-51 | 1.576704e-48 |
| MsG0280009554.01 | MsG0580029783.01 | 0.809417 | 1.911809e-50 | 1.121907e-47 |
| MsG0280009554.01 | MsG0580029801.01 | 0.805302 | 1.425710e-49 | 7.516229e-47 |
| MsG0280009554.01 | MsG0580029919.01 | 0.806792 | 6.927195e-50 | 3.794112e-47 |
| MsG0280009554.01 | MsG0580030003.01 | 0.828926 | 6.849623e-55 | 6.905260e-52 |
| MsG0280009554.01 | MsG0680031000.01 | 0.801268 | 9.757548e-49 | 4.639892e-46 |
| MsG0280009554.01 | MsG0680031051.01 | 0.833267 | 5.881374e-56 | 6.738461e-53 |
| MsG0280009554.01 | MsG0680031301.01 | 0.801785 | 7.644121e-49 | 3.682687e-46 |
| MsG0280009554.01 | MsG0680031536.01 | 0.806977 | 6.328416e-50 | 3.482829e-47 |
| MsG0280009554.01 | MsG0680031654.01 | 0.815221 | 1.033045e-51 | 7.079598e-49 |
| MsG0280009554.01 | MsG0680032075.01 | 0.811545 | 6.637399e-51 | 4.120219e-48 |
| MsG0280009554.01 | MsG0680033926.01 | 0.837237 | 5.850059e-57 | 7.551650e-54 |
| MsG0280009554.01 | MsG0680034235.01 | 0.815054 | 1.125431e-51 | 7.677804e-49 |
| MsG0280009554.01 | MsG0680034476.01 | 0.848854 | 4.701247e-60 | 8.745006e-57 |
| MsG0280009554.01 | MsG0680035601.01 | 0.813114 | 3.015218e-51 | 1.951602e-48 |
| MsG0280009554.01 | MsG0680035854.01 | 0.807803 | 4.228780e-50 | 2.377841e-47 |
| MsG0280009554.01 | MsG0780035937.01 | 0.811957 | 5.399561e-51 | 3.388617e-48 |
| MsG0280009554.01 | MsG0780036117.01 | 0.813851 | 2.076372e-51 | 1.371188e-48 |
| MsG0280009554.01 | MsG0780036247.01 | -0.806402 | 8.369521e-50 | 4.538514e-47 |
| MsG0280009554.01 | MsG0780036633.01 | 0.801073 | 1.069505e-48 | 5.060920e-46 |
| MsG0280009554.01 | MsG0780036845.01 | 0.829862 | 4.058691e-55 | 4.206395e-52 |
| MsG0280009554.01 | MsG0780039340.01 | 0.805277 | 1.442908e-49 | 7.601935e-47 |
| MsG0280009554.01 | MsG0780039943.01 | 0.822011 | 2.976053e-53 | 2.460659e-50 |
| MsG0280009554.01 | MsG0780040125.01 | 0.821766 | 3.390066e-53 | 2.783635e-50 |
| MsG0280009554.01 | MsG0780040208.01 | 0.825161 | 5.451750e-54 | 4.930412e-51 |
| MsG0280009554.01 | MsG0780040375.01 | -0.822920 | 1.829329e-53 | 1.552316e-50 |
| MsG0280009554.01 | MsG0780040424.01 | 0.819620 | 1.055309e-52 | 8.161926e-50 |
| MsG0280009554.01 | MsG0780040519.01 | 0.815090 | 1.104615e-51 | 7.543182e-49 |
| MsG0280009554.01 | MsG0780040742.01 | 0.826987 | 2.006236e-54 | 1.911464e-51 |
| MsG0280009554.01 | MsG0780041210.01 | 0.808545 | 2.938898e-50 | 1.685084e-47 |
| MsG0280009554.01 | MsG0780041729.01 | -0.814133 | 1.799306e-51 | 1.197368e-48 |
| MsG0280009554.01 | MsG0880042033.01 | 0.809839 | 1.551343e-50 | 9.206041e-48 |
| MsG0280009554.01 | MsG0880042399.01 | -0.842998 | 1.835272e-58 | 2.831415e-55 |
| MsG0280009554.01 | MsG0880043162.01 | 0.855876 | 4.698927e-62 | 1.100714e-58 |
| MsG0280009554.01 | MsG0880043194.01 | 0.826586 | 2.500526e-54 | 2.354798e-51 |
| MsG0280009554.01 | MsG0880043351.01 | 0.823476 | 1.357377e-53 | 1.169957e-50 |
| MsG0280009554.01 | MsG0880045329.01 | 0.838856 | 2.242579e-57 | 3.042252e-54 |
| MsG0280009554.01 | MsG0880045869.01 | 0.800820 | 1.204314e-48 | 5.662132e-46 |
| MsG0280009554.01 | MsG0880046068.01 | 0.827317 | 1.672597e-54 | 1.609185e-51 |
| MsG0280009554.01 | MsG0880047428.01 | 0.825512 | 4.501736e-54 | 4.111749e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009554.01.T01 | MTR_8g442400 | 56.113 | 319 | 124 | 5 | 1 | 304 | 15 | 332 | 1.01e-102 | 332 |
| MsG0280009554.01.T01 | MTR_0036s0010 | 98.684 | 76 | 1 | 0 | 1 | 76 | 1 | 76 | 6.68e-50 | 162 |
| MsG0280009554.01.T01 | MTR_1g090020 | 37.578 | 322 | 148 | 8 | 30 | 298 | 23 | 344 | 2.07e-48 | 176 |
| MsG0280009554.01.T01 | MTR_6g033130 | 41.860 | 258 | 113 | 6 | 78 | 298 | 84 | 341 | 1.62e-47 | 173 |
| MsG0280009554.01.T01 | MTR_6g033130 | 41.860 | 258 | 113 | 6 | 78 | 298 | 84 | 341 | 1.88e-47 | 173 |
| MsG0280009554.01.T01 | MTR_2g461180 | 45.355 | 183 | 91 | 3 | 151 | 324 | 215 | 397 | 6.37e-38 | 145 |
| MsG0280009554.01.T01 | MTR_4g116520 | 53.957 | 139 | 58 | 3 | 146 | 280 | 147 | 283 | 6.57e-38 | 145 |
| MsG0280009554.01.T01 | MTR_4g128650 | 50.350 | 143 | 69 | 2 | 139 | 281 | 16 | 156 | 2.17e-29 | 120 |
| MsG0280009554.01.T01 | MTR_4g091530 | 46.903 | 113 | 57 | 2 | 141 | 250 | 19 | 131 | 2.06e-28 | 115 |
| MsG0280009554.01.T01 | MTR_2g005700 | 39.716 | 141 | 73 | 3 | 151 | 280 | 13 | 152 | 2.67e-25 | 104 |
| MsG0280009554.01.T01 | MTR_6g082400 | 39.610 | 154 | 82 | 4 | 151 | 295 | 59 | 210 | 1.90e-24 | 105 |
| MsG0280009554.01.T01 | MTR_2g010160 | 44.444 | 108 | 58 | 2 | 145 | 250 | 38 | 145 | 3.86e-23 | 100 |
| MsG0280009554.01.T01 | MTR_4g092850 | 42.202 | 109 | 59 | 2 | 145 | 250 | 33 | 140 | 3.05e-22 | 97.8 |
| MsG0280009554.01.T01 | MTR_4g105020 | 49.451 | 91 | 44 | 1 | 142 | 232 | 2 | 90 | 4.93e-22 | 92.4 |
| MsG0280009554.01.T01 | MTR_5g032960 | 44.000 | 100 | 55 | 1 | 151 | 249 | 16 | 115 | 1.66e-21 | 92.0 |
| MsG0280009554.01.T01 | MTR_1g109470 | 41.228 | 114 | 62 | 2 | 142 | 250 | 46 | 159 | 2.22e-21 | 96.3 |
| MsG0280009554.01.T01 | MTR_8g106245 | 36.620 | 142 | 71 | 5 | 117 | 250 | 25 | 155 | 3.12e-17 | 83.6 |
| MsG0280009554.01.T01 | MTR_3g077030 | 43.902 | 82 | 46 | 0 | 151 | 232 | 9 | 90 | 4.95e-17 | 79.3 |
| MsG0280009554.01.T01 | MTR_5g067120 | 40.000 | 115 | 60 | 4 | 143 | 252 | 21 | 131 | 9.82e-17 | 81.3 |
| MsG0280009554.01.T01 | MTR_5g088620 | 34.579 | 107 | 65 | 2 | 151 | 252 | 4 | 110 | 2.68e-14 | 71.6 |
| MsG0280009554.01.T01 | MTR_5g488180 | 35.780 | 109 | 61 | 3 | 151 | 252 | 4 | 110 | 1.38e-12 | 67.0 |
| MsG0280009554.01.T01 | MTR_5g088090 | 35.780 | 109 | 61 | 3 | 151 | 252 | 4 | 110 | 1.38e-12 | 67.0 |
| MsG0280009554.01.T01 | MTR_5g088140 | 35.780 | 109 | 61 | 3 | 151 | 252 | 4 | 110 | 1.38e-12 | 67.0 |
| MsG0280009554.01.T01 | MTR_5g088120 | 34.862 | 109 | 62 | 3 | 151 | 252 | 4 | 110 | 2.81e-12 | 65.5 |
| MsG0280009554.01.T01 | MTR_5g488190 | 34.862 | 109 | 62 | 3 | 151 | 252 | 4 | 110 | 2.81e-12 | 65.5 |
| MsG0280009554.01.T01 | MTR_5g067160 | 33.600 | 125 | 75 | 3 | 151 | 267 | 43 | 167 | 9.61e-12 | 66.2 |
| MsG0280009554.01.T01 | MTR_5g088590 | 33.028 | 109 | 64 | 3 | 151 | 252 | 4 | 110 | 3.01e-11 | 63.2 |
| MsG0280009554.01.T01 | MTR_5g088040 | 32.710 | 107 | 67 | 3 | 151 | 252 | 4 | 110 | 4.13e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009554.01.T01 | AT1G79570 | 51.829 | 328 | 140 | 8 | 1 | 312 | 14 | 339 | 2.29e-91 | 295 |
| MsG0280009554.01.T01 | AT1G79570 | 51.829 | 328 | 140 | 8 | 1 | 312 | 14 | 339 | 1.22e-90 | 295 |
| MsG0280009554.01.T01 | AT1G79570 | 51.829 | 328 | 140 | 8 | 1 | 312 | 14 | 339 | 1.22e-90 | 295 |
| MsG0280009554.01.T01 | AT1G79570 | 51.829 | 328 | 140 | 8 | 1 | 312 | 14 | 339 | 1.97e-90 | 295 |
| MsG0280009554.01.T01 | AT1G79570 | 51.829 | 328 | 140 | 8 | 1 | 312 | 14 | 339 | 1.97e-90 | 295 |
| MsG0280009554.01.T01 | AT1G16270 | 52.703 | 296 | 114 | 7 | 32 | 312 | 43 | 327 | 4.63e-76 | 254 |
| MsG0280009554.01.T01 | AT1G16270 | 52.703 | 296 | 114 | 7 | 32 | 312 | 43 | 327 | 4.63e-76 | 254 |
| MsG0280009554.01.T01 | AT1G16270 | 52.703 | 296 | 114 | 7 | 32 | 312 | 43 | 327 | 4.63e-76 | 254 |
| MsG0280009554.01.T01 | AT2G35050 | 48.013 | 302 | 124 | 10 | 2 | 281 | 16 | 306 | 3.00e-67 | 230 |
| MsG0280009554.01.T01 | AT2G35050 | 48.013 | 302 | 124 | 10 | 2 | 281 | 16 | 306 | 3.00e-67 | 230 |
| MsG0280009554.01.T01 | AT3G24715 | 35.484 | 310 | 151 | 9 | 44 | 310 | 29 | 332 | 1.78e-39 | 149 |
| MsG0280009554.01.T01 | AT3G24715 | 35.484 | 310 | 151 | 9 | 44 | 310 | 29 | 332 | 1.78e-39 | 149 |
| MsG0280009554.01.T01 | AT3G24715 | 35.484 | 310 | 151 | 9 | 44 | 310 | 29 | 332 | 1.78e-39 | 149 |
| MsG0280009554.01.T01 | AT3G46920 | 54.815 | 135 | 56 | 3 | 151 | 280 | 75 | 209 | 6.64e-37 | 142 |
| MsG0280009554.01.T01 | AT3G46920 | 54.815 | 135 | 56 | 3 | 151 | 280 | 9 | 143 | 7.94e-37 | 142 |
| MsG0280009554.01.T01 | AT1G04700 | 37.891 | 256 | 116 | 8 | 45 | 280 | 30 | 262 | 1.54e-35 | 138 |
| MsG0280009554.01.T01 | AT1G04700 | 37.891 | 256 | 116 | 8 | 45 | 280 | 30 | 262 | 2.08e-35 | 137 |
| MsG0280009554.01.T01 | AT1G04700 | 37.891 | 256 | 116 | 8 | 45 | 280 | 30 | 262 | 2.08e-35 | 137 |
| MsG0280009554.01.T01 | AT5G57610 | 51.515 | 132 | 61 | 2 | 151 | 280 | 24 | 154 | 2.56e-33 | 131 |
| MsG0280009554.01.T01 | AT5G49920 | 46.715 | 137 | 67 | 3 | 145 | 280 | 4 | 135 | 7.44e-32 | 121 |
| MsG0280009554.01.T01 | AT4G05150 | 38.667 | 150 | 83 | 4 | 106 | 251 | 18 | 162 | 1.03e-25 | 108 |
| MsG0280009554.01.T01 | AT3G26510 | 50.000 | 112 | 48 | 3 | 143 | 249 | 4 | 112 | 1.42e-25 | 102 |
| MsG0280009554.01.T01 | AT3G26510 | 50.000 | 112 | 48 | 3 | 143 | 249 | 4 | 112 | 1.42e-25 | 102 |
| MsG0280009554.01.T01 | AT3G26510 | 50.000 | 112 | 48 | 3 | 143 | 249 | 4 | 112 | 1.42e-25 | 102 |
| MsG0280009554.01.T01 | AT3G26510 | 50.000 | 112 | 48 | 3 | 143 | 249 | 4 | 112 | 1.42e-25 | 102 |
| MsG0280009554.01.T01 | AT3G26510 | 50.000 | 112 | 48 | 3 | 143 | 249 | 4 | 112 | 1.42e-25 | 102 |
| MsG0280009554.01.T01 | AT3G26510 | 50.000 | 112 | 48 | 3 | 143 | 249 | 4 | 112 | 1.42e-25 | 102 |
| MsG0280009554.01.T01 | AT1G70640 | 54.023 | 87 | 39 | 1 | 147 | 232 | 4 | 90 | 2.85e-24 | 98.2 |
| MsG0280009554.01.T01 | AT3G48240 | 50.505 | 99 | 45 | 1 | 151 | 249 | 14 | 108 | 1.57e-22 | 94.0 |
| MsG0280009554.01.T01 | AT5G64430 | 39.855 | 138 | 72 | 3 | 148 | 278 | 42 | 175 | 2.50e-22 | 98.6 |
| MsG0280009554.01.T01 | AT2G01190 | 46.226 | 106 | 52 | 2 | 151 | 251 | 75 | 180 | 3.67e-22 | 98.6 |
| MsG0280009554.01.T01 | AT5G09620 | 41.441 | 111 | 59 | 2 | 151 | 255 | 40 | 150 | 1.62e-20 | 93.2 |
| MsG0280009554.01.T01 | AT3G18230 | 34.731 | 167 | 104 | 2 | 151 | 312 | 64 | 230 | 2.03e-20 | 93.2 |
| MsG0280009554.01.T01 | AT5G09620 | 41.071 | 112 | 58 | 3 | 151 | 255 | 40 | 150 | 2.10e-20 | 92.8 |
| MsG0280009554.01.T01 | AT5G63130 | 51.948 | 77 | 37 | 0 | 146 | 222 | 10 | 86 | 8.93e-19 | 84.0 |
| MsG0280009554.01.T01 | AT5G63130 | 51.948 | 77 | 37 | 0 | 146 | 222 | 10 | 86 | 8.93e-19 | 84.0 |
| MsG0280009554.01.T01 | AT1G25300 | 33.913 | 115 | 70 | 2 | 151 | 263 | 11 | 121 | 6.88e-18 | 83.2 |
| MsG0280009554.01.T01 | AT5G16220 | 33.094 | 139 | 86 | 4 | 151 | 283 | 31 | 168 | 1.10e-16 | 81.6 |
Find 86 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGCTGGTATTCATTTCT+AGG | 0.200025 | 2:+54224752 | None:intergenic |
| CAGTATGTTATTGCTGTTAA+TGG | 0.224995 | 2:-54223945 | MsG0280009554.01.T01:CDS |
| ATCACACCACCGGAACTAAA+TGG | 0.240896 | 2:+54223699 | None:intergenic |
| TAATTATACAACTGGTTATA+TGG | 0.254070 | 2:-54224543 | MsG0280009554.01.T01:CDS |
| ATATAACCAGTTGTATAATT+AGG | 0.258175 | 2:+54224545 | None:intergenic |
| TCTTTCTGTCAGAAAATATT+AGG | 0.269496 | 2:-54223726 | MsG0280009554.01.T01:CDS |
| TCCTGATGCAGCGAAGTTCT+TGG | 0.283088 | 2:+54224392 | None:intergenic |
| AAGATATGTCCTTTCTTATA+CGG | 0.296886 | 2:+54224219 | None:intergenic |
| TGCAAATGATATAAATGAAT+TGG | 0.298515 | 2:-54223871 | MsG0280009554.01.T01:CDS |
| GTTCTCAATCAGTGATTTGC+AGG | 0.317590 | 2:-54224012 | MsG0280009554.01.T01:CDS |
| ATGAGAGACAGGGCAAATAT+TGG | 0.353843 | 2:-54224596 | MsG0280009554.01.T01:CDS |
| AGACAGTTTGTGCATGGATA+TGG | 0.356567 | 2:-54224365 | MsG0280009554.01.T01:CDS |
| TTATACGGAGAATGCGTGTT+TGG | 0.381207 | 2:+54224234 | None:intergenic |
| ACAATTAAGTACCAGCTTCC+CGG | 0.382280 | 2:-54224149 | MsG0280009554.01.T01:CDS |
| TGAGAGACAGGGCAAATATT+GGG | 0.389082 | 2:-54224595 | MsG0280009554.01.T01:CDS |
| ATGAAGTTTCTTTGTAGCTT+CGG | 0.397325 | 2:-54224308 | MsG0280009554.01.T01:CDS |
| TGCATTATTGACTGTGATCC+AGG | 0.400408 | 2:+54224734 | None:intergenic |
| CTCTTGAGTTTATGAGAGAC+AGG | 0.408175 | 2:-54224607 | MsG0280009554.01.T01:CDS |
| TCCAAGAACTTCGCTGCATC+AGG | 0.410677 | 2:-54224393 | MsG0280009554.01.T01:CDS |
| GGTGTATAAATCAGTACAAT+CGG | 0.413109 | 2:-54223833 | MsG0280009554.01.T01:CDS |
| TGATGAGTTATCATAACTTT+CGG | 0.413222 | 2:+54224337 | None:intergenic |
| TTAGGCAACCCATTTAGTTC+CGG | 0.419445 | 2:-54223708 | MsG0280009554.01.T01:CDS |
| GATTTGCAGGATGCTCAGTT+TGG | 0.423232 | 2:-54223999 | MsG0280009554.01.T01:CDS |
| TGCTGTTAATGGCATGGACT+TGG | 0.425364 | 2:-54223934 | MsG0280009554.01.T01:CDS |
| AGTCATGGAGGATCTGAAAC+TGG | 0.436068 | 2:-54224497 | MsG0280009554.01.T01:CDS |
| CAATTAAGTACCAGCTTCCC+GGG | 0.442674 | 2:-54224148 | MsG0280009554.01.T01:CDS |
| AGTGATCCTAATTATACAAC+TGG | 0.444251 | 2:-54224551 | MsG0280009554.01.T01:CDS |
| CGGGGAAGATCTTGATGCCT+TGG | 0.444463 | 2:-54224129 | MsG0280009554.01.T01:CDS |
| AGCGTCGATGATCTATAATC+AGG | 0.447067 | 2:-54224177 | MsG0280009554.01.T01:CDS |
| GTACAATCGGGGAGTAGAAA+TGG | 0.450505 | 2:-54223820 | MsG0280009554.01.T01:CDS |
| CATGTCTATGCCGTCAATGA+TGG | 0.456219 | 2:-54224468 | MsG0280009554.01.T01:CDS |
| TCAGTTTGGTCTCACCTCCA+TGG | 0.464459 | 2:-54223985 | MsG0280009554.01.T01:CDS |
| TACCTTAGCTTTCCATCACT+TGG | 0.469395 | 2:+54224266 | None:intergenic |
| TCACACCACCGGAACTAAAT+GGG | 0.472555 | 2:+54223700 | None:intergenic |
| CAAGATCTTCCCCGGGAAGC+TGG | 0.477699 | 2:+54224138 | None:intergenic |
| GATGGAAAGCTAAGGTATGT+TGG | 0.479309 | 2:-54224260 | MsG0280009554.01.T01:CDS |
| TGTATCAAATAATGCTGTAC+AGG | 0.481504 | 2:+54224647 | None:intergenic |
| GAGAAGGATCACAAAAGCTT+AGG | 0.485352 | 2:-54224043 | MsG0280009554.01.T01:CDS |
| CGATATTTATCCATCATTGA+CGG | 0.493334 | 2:+54224458 | None:intergenic |
| GTTTAACTTCCGATGTATTG+AGG | 0.496791 | 2:+54224669 | None:intergenic |
| TAGAAATGGCTGTGGAATTG+AGG | 0.505903 | 2:-54223806 | MsG0280009554.01.T01:CDS |
| GTGTATAAATCAGTACAATC+GGG | 0.510389 | 2:-54223832 | MsG0280009554.01.T01:CDS |
| CATTAACAGCAATAACATAC+TGG | 0.512418 | 2:+54223946 | None:intergenic |
| GAGTCTCAAGTCATTGAAGC+TGG | 0.518318 | 2:-54223784 | MsG0280009554.01.T01:CDS |
| CAGTTTGGTCTCACCTCCAT+GGG | 0.522353 | 2:-54223984 | MsG0280009554.01.T01:CDS |
| CAAGGCATCAAGATCTTCCC+CGG | 0.523488 | 2:+54224130 | None:intergenic |
| ATTTAGTTCCGGTGGTGTGA+TGG | 0.528827 | 2:-54223697 | MsG0280009554.01.T01:CDS |
| CCTAGAAATGAATACCAGCC+TGG | 0.535022 | 2:-54224752 | MsG0280009554.01.T01:CDS |
| AAATGATATAAATGAATTGG+AGG | 0.535088 | 2:-54223868 | MsG0280009554.01.T01:CDS |
| AATGATATAAATGAATTGGA+GGG | 0.553986 | 2:-54223867 | MsG0280009554.01.T01:CDS |
| CAGCATTATTTGATACAGAC+GGG | 0.556155 | 2:-54224641 | MsG0280009554.01.T01:CDS |
| CTCAACTGCCATCACACCAC+CGG | 0.556720 | 2:+54223689 | None:intergenic |
| ATATTGCCACGGCCAAGTGA+TGG | 0.557947 | 2:-54224278 | MsG0280009554.01.T01:CDS |
| ACAGCATTATTTGATACAGA+CGG | 0.561948 | 2:-54224642 | MsG0280009554.01.T01:CDS |
| GACAATAGACAGTTTGTGCA+TGG | 0.562402 | 2:-54224371 | MsG0280009554.01.T01:CDS |
| ACGCATTCTCCGTATAAGAA+AGG | 0.563451 | 2:-54224228 | MsG0280009554.01.T01:CDS |
| TTATTTGATACAGACGGGTG+AGG | 0.567880 | 2:-54224636 | MsG0280009554.01.T01:CDS |
| GACTTCAGAATCATCGCCCA+TGG | 0.569119 | 2:+54223968 | None:intergenic |
| CGAGGATATACAGAACATGA+TGG | 0.569777 | 2:-54224090 | MsG0280009554.01.T01:CDS |
| GTCAATAATGCATGACCACA+TGG | 0.572642 | 2:-54224723 | MsG0280009554.01.T01:CDS |
| TCACTGACATTCGAAAATAC+AGG | 0.575002 | 2:+54224569 | None:intergenic |
| AGCTTTCCATCACTTGGCCG+TGG | 0.576472 | 2:+54224272 | None:intergenic |
| GGCAACCCATTTAGTTCCGG+TGG | 0.576497 | 2:-54223705 | MsG0280009554.01.T01:CDS |
| TGTTATTGCTGTTAATGGCA+TGG | 0.586180 | 2:-54223940 | MsG0280009554.01.T01:CDS |
| TGATATAAATGAATTGGAGG+GGG | 0.590845 | 2:-54223865 | MsG0280009554.01.T01:CDS |
| GAGTTTGATAGAAGCAACTA+CGG | 0.597113 | 2:-54224431 | MsG0280009554.01.T01:CDS |
| TCGGGGAGTAGAAATGGCTG+TGG | 0.605719 | 2:-54223814 | MsG0280009554.01.T01:CDS |
| ATAATGCATGACCACATGGA+TGG | 0.606199 | 2:-54224719 | MsG0280009554.01.T01:CDS |
| ATGATATAAATGAATTGGAG+GGG | 0.607759 | 2:-54223866 | MsG0280009554.01.T01:CDS |
| TTATTGACTGTGATCCAGGC+TGG | 0.620943 | 2:+54224738 | None:intergenic |
| TCCGATGTATTGAGGTCATG+TGG | 0.628153 | 2:+54224677 | None:intergenic |
| GGAAAGCTAAGGTATGTTGG+AGG | 0.631215 | 2:-54224257 | MsG0280009554.01.T01:CDS |
| ACTGGTTATATGGAACTGAA+AGG | 0.631603 | 2:-54224533 | MsG0280009554.01.T01:CDS |
| GGCCAAGTGATGGAAAGCTA+AGG | 0.638781 | 2:-54224268 | MsG0280009554.01.T01:CDS |
| AAGTTTCTTTGTAGCTTCGG+CGG | 0.643153 | 2:-54224305 | MsG0280009554.01.T01:CDS |
| AAGGCATCAAGATCTTCCCC+GGG | 0.650794 | 2:+54224131 | None:intergenic |
| GTCAGATGATACAGATACCA+AGG | 0.657270 | 2:+54224112 | None:intergenic |
| ACCACATGACCTCAATACAT+CGG | 0.661871 | 2:-54224678 | MsG0280009554.01.T01:CDS |
| AATCATCTAGAAGATAGAGA+AGG | 0.670856 | 2:-54224059 | MsG0280009554.01.T01:CDS |
| TCTTGAGTTTATGAGAGACA+GGG | 0.674716 | 2:-54224606 | MsG0280009554.01.T01:CDS |
| TCATATAAATTCCATCCATG+TGG | 0.684508 | 2:+54224708 | None:intergenic |
| TGTATAAATCAGTACAATCG+GGG | 0.687901 | 2:-54223831 | MsG0280009554.01.T01:CDS |
| TTCAGAATCATCGCCCATGG+AGG | 0.702830 | 2:+54223971 | None:intergenic |
| TCGGCGGTAGAATATTGCCA+CGG | 0.717552 | 2:-54224289 | MsG0280009554.01.T01:CDS |
| GGTATCTGTATCATCTGACG+AGG | 0.721389 | 2:-54224108 | MsG0280009554.01.T01:CDS |
| AATTAAGTACCAGCTTCCCG+GGG | 0.728477 | 2:-54224147 | MsG0280009554.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGATATAAATGAATTGG+AGG | - | Chr2:54224576-54224595 | MsG0280009554.01.T01:CDS | 20.0% |
| !! | AATGATATAAATGAATTGGA+GGG | - | Chr2:54224577-54224596 | MsG0280009554.01.T01:CDS | 20.0% |
| !! | ATATAACCAGTTGTATAATT+AGG | + | Chr2:54223902-54223921 | None:intergenic | 20.0% |
| !! | TAATTATACAACTGGTTATA+TGG | - | Chr2:54223901-54223920 | MsG0280009554.01.T01:CDS | 20.0% |
| !! | TGCAAATGATATAAATGAAT+TGG | - | Chr2:54224573-54224592 | MsG0280009554.01.T01:CDS | 20.0% |
| ! | AAGATATGTCCTTTCTTATA+CGG | + | Chr2:54224228-54224247 | None:intergenic | 25.0% |
| ! | AGAAAAAACTCAAATATGGT+TGG | - | Chr2:54224538-54224557 | MsG0280009554.01.T01:CDS | 25.0% |
| ! | ATGATATAAATGAATTGGAG+GGG | - | Chr2:54224578-54224597 | MsG0280009554.01.T01:CDS | 25.0% |
| ! | TCTTTCTGTCAGAAAATATT+AGG | - | Chr2:54224718-54224737 | MsG0280009554.01.T01:CDS | 25.0% |
| ! | TGATGAGTTATCATAACTTT+CGG | + | Chr2:54224110-54224129 | None:intergenic | 25.0% |
| AATCATCTAGAAGATAGAGA+AGG | - | Chr2:54224385-54224404 | MsG0280009554.01.T01:CDS | 30.0% | |
| ACAGCATTATTTGATACAGA+CGG | - | Chr2:54223802-54223821 | MsG0280009554.01.T01:CDS | 30.0% | |
| AGTGATCCTAATTATACAAC+TGG | - | Chr2:54223893-54223912 | MsG0280009554.01.T01:CDS | 30.0% | |
| ATGAAGTTTCTTTGTAGCTT+CGG | - | Chr2:54224136-54224155 | MsG0280009554.01.T01:CDS | 30.0% | |
| CATTAACAGCAATAACATAC+TGG | + | Chr2:54224501-54224520 | None:intergenic | 30.0% | |
| CGATATTTATCCATCATTGA+CGG | + | Chr2:54223989-54224008 | None:intergenic | 30.0% | |
| GGTGTATAAATCAGTACAAT+CGG | - | Chr2:54224611-54224630 | MsG0280009554.01.T01:CDS | 30.0% | |
| GTCGAGAAAAAACTCAAATA+TGG | - | Chr2:54224534-54224553 | MsG0280009554.01.T01:CDS | 30.0% | |
| GTGTATAAATCAGTACAATC+GGG | - | Chr2:54224612-54224631 | MsG0280009554.01.T01:CDS | 30.0% | |
| TCATATAAATTCCATCCATG+TGG | + | Chr2:54223739-54223758 | None:intergenic | 30.0% | |
| TGATATAAATGAATTGGAGG+GGG | - | Chr2:54224579-54224598 | MsG0280009554.01.T01:CDS | 30.0% | |
| TGTATAAATCAGTACAATCG+GGG | - | Chr2:54224613-54224632 | MsG0280009554.01.T01:CDS | 30.0% | |
| TGTATCAAATAATGCTGTAC+AGG | + | Chr2:54223800-54223819 | None:intergenic | 30.0% | |
| ! | CAGTATGTTATTGCTGTTAA+TGG | - | Chr2:54224499-54224518 | MsG0280009554.01.T01:CDS | 30.0% |
| ACTGGTTATATGGAACTGAA+AGG | - | Chr2:54223911-54223930 | MsG0280009554.01.T01:CDS | 35.0% | |
| CAGCATTATTTGATACAGAC+GGG | - | Chr2:54223803-54223822 | MsG0280009554.01.T01:CDS | 35.0% | |
| GAGTTTGATAGAAGCAACTA+CGG | - | Chr2:54224013-54224032 | MsG0280009554.01.T01:CDS | 35.0% | |
| TCACTGACATTCGAAAATAC+AGG | + | Chr2:54223878-54223897 | None:intergenic | 35.0% | |
| TCTTGAGTTTATGAGAGACA+GGG | - | Chr2:54223838-54223857 | MsG0280009554.01.T01:CDS | 35.0% | |
| ! | GTTTAACTTCCGATGTATTG+AGG | + | Chr2:54223778-54223797 | None:intergenic | 35.0% |
| ! | TGTTATTGCTGTTAATGGCA+TGG | - | Chr2:54224504-54224523 | MsG0280009554.01.T01:CDS | 35.0% |
| !! | ATTTTAGGAATCAGTCATGG+AGG | - | Chr2:54223935-54223954 | MsG0280009554.01.T01:CDS | 35.0% |
| !!! | ATGGAACTGAAAGGCATTTT+AGG | - | Chr2:54223920-54223939 | MsG0280009554.01.T01:CDS | 35.0% |
| AAGTTTCTTTGTAGCTTCGG+CGG | - | Chr2:54224139-54224158 | MsG0280009554.01.T01:CDS | 40.0% | |
| ACAATTAAGTACCAGCTTCC+CGG | - | Chr2:54224295-54224314 | MsG0280009554.01.T01:CDS | 40.0% | |
| ACCACATGACCTCAATACAT+CGG | - | Chr2:54223766-54223785 | MsG0280009554.01.T01:CDS | 40.0% | |
| ACGCATTCTCCGTATAAGAA+AGG | - | Chr2:54224216-54224235 | MsG0280009554.01.T01:CDS | 40.0% | |
| AGACAGTTTGTGCATGGATA+TGG | - | Chr2:54224079-54224098 | MsG0280009554.01.T01:CDS | 40.0% | |
| ATAATGCATGACCACATGGA+TGG | - | Chr2:54223725-54223744 | MsG0280009554.01.T01:CDS | 40.0% | |
| ATGAGAGACAGGGCAAATAT+TGG | - | Chr2:54223848-54223867 | MsG0280009554.01.T01:CDS | 40.0% | |
| CGAGGATATACAGAACATGA+TGG | - | Chr2:54224354-54224373 | MsG0280009554.01.T01:CDS | 40.0% | |
| CTCTTGAGTTTATGAGAGAC+AGG | - | Chr2:54223837-54223856 | MsG0280009554.01.T01:CDS | 40.0% | |
| GACAATAGACAGTTTGTGCA+TGG | - | Chr2:54224073-54224092 | MsG0280009554.01.T01:CDS | 40.0% | |
| GAGAAGGATCACAAAAGCTT+AGG | - | Chr2:54224401-54224420 | MsG0280009554.01.T01:CDS | 40.0% | |
| GATGGAAAGCTAAGGTATGT+TGG | - | Chr2:54224184-54224203 | MsG0280009554.01.T01:CDS | 40.0% | |
| GTCAATAATGCATGACCACA+TGG | - | Chr2:54223721-54223740 | MsG0280009554.01.T01:CDS | 40.0% | |
| GTCAGATGATACAGATACCA+AGG | + | Chr2:54224335-54224354 | None:intergenic | 40.0% | |
| TAGAAATGGCTGTGGAATTG+AGG | - | Chr2:54224638-54224657 | MsG0280009554.01.T01:CDS | 40.0% | |
| TGAGAGACAGGGCAAATATT+GGG | - | Chr2:54223849-54223868 | MsG0280009554.01.T01:CDS | 40.0% | |
| TTATACGGAGAATGCGTGTT+TGG | + | Chr2:54224213-54224232 | None:intergenic | 40.0% | |
| TTATTTGATACAGACGGGTG+AGG | - | Chr2:54223808-54223827 | MsG0280009554.01.T01:CDS | 40.0% | |
| ! | GTTCTCAATCAGTGATTTGC+AGG | - | Chr2:54224432-54224451 | MsG0280009554.01.T01:CDS | 40.0% |
| ! | TACCTTAGCTTTCCATCACT+TGG | + | Chr2:54224181-54224200 | None:intergenic | 40.0% |
| ! | TGCATTATTGACTGTGATCC+AGG | + | Chr2:54223713-54223732 | None:intergenic | 40.0% |
| ! | TTAGGCAACCCATTTAGTTC+CGG | - | Chr2:54224736-54224755 | MsG0280009554.01.T01:CDS | 40.0% |
| !! | AGCGTCGATGATCTATAATC+AGG | - | Chr2:54224267-54224286 | MsG0280009554.01.T01:CDS | 40.0% |
| !! | GGCATTTTAGGAATCAGTCA+TGG | - | Chr2:54223932-54223951 | MsG0280009554.01.T01:CDS | 40.0% |
| AATTAAGTACCAGCTTCCCG+GGG | - | Chr2:54224297-54224316 | MsG0280009554.01.T01:CDS | 45.0% | |
| AATTGGAGGGGGATCATTCT+TGG | - | Chr2:54224590-54224609 | MsG0280009554.01.T01:CDS | 45.0% | |
| ATCACACCACCGGAACTAAA+TGG | + | Chr2:54224748-54224767 | None:intergenic | 45.0% | |
| CAATTAAGTACCAGCTTCCC+GGG | - | Chr2:54224296-54224315 | MsG0280009554.01.T01:CDS | 45.0% | |
| CATGTCTATGCCGTCAATGA+TGG | - | Chr2:54223976-54223995 | MsG0280009554.01.T01:CDS | 45.0% | |
| CCAGGCTGGTATTCATTTCT+AGG | + | Chr2:54223695-54223714 | None:intergenic | 45.0% | |
| CCTAGAAATGAATACCAGCC+TGG | - | Chr2:54223692-54223711 | MsG0280009554.01.T01:CDS | 45.0% | |
| GAGTCTCAAGTCATTGAAGC+TGG | - | Chr2:54224660-54224679 | MsG0280009554.01.T01:CDS | 45.0% | |
| GATTTGCAGGATGCTCAGTT+TGG | - | Chr2:54224445-54224464 | MsG0280009554.01.T01:CDS | 45.0% | |
| GGAAAGCTAAGGTATGTTGG+AGG | - | Chr2:54224187-54224206 | MsG0280009554.01.T01:CDS | 45.0% | |
| GGTATCTGTATCATCTGACG+AGG | - | Chr2:54224336-54224355 | MsG0280009554.01.T01:CDS | 45.0% | |
| GTACAATCGGGGAGTAGAAA+TGG | - | Chr2:54224624-54224643 | MsG0280009554.01.T01:CDS | 45.0% | |
| TCACACCACCGGAACTAAAT+GGG | + | Chr2:54224747-54224766 | None:intergenic | 45.0% | |
| TCCGATGTATTGAGGTCATG+TGG | + | Chr2:54223770-54223789 | None:intergenic | 45.0% | |
| TGCTGTTAATGGCATGGACT+TGG | - | Chr2:54224510-54224529 | MsG0280009554.01.T01:CDS | 45.0% | |
| ! | AGTCATGGAGGATCTGAAAC+TGG | - | Chr2:54223947-54223966 | MsG0280009554.01.T01:CDS | 45.0% |
| ! | ATTTAGTTCCGGTGGTGTGA+TGG | - | Chr2:54224747-54224766 | MsG0280009554.01.T01:CDS | 45.0% |
| ! | TTATTGACTGTGATCCAGGC+TGG | + | Chr2:54223709-54223728 | None:intergenic | 45.0% |
| ATATTGCCACGGCCAAGTGA+TGG | - | Chr2:54224166-54224185 | MsG0280009554.01.T01:CDS | 50.0% | |
| CAGTTTGGTCTCACCTCCAT+GGG | - | Chr2:54224460-54224479 | MsG0280009554.01.T01:CDS | 50.0% | |
| GACTTCAGAATCATCGCCCA+TGG | + | Chr2:54224479-54224498 | None:intergenic | 50.0% | |
| TCAGTTTGGTCTCACCTCCA+TGG | - | Chr2:54224459-54224478 | MsG0280009554.01.T01:CDS | 50.0% | |
| TCCAAGAACTTCGCTGCATC+AGG | - | Chr2:54224051-54224070 | MsG0280009554.01.T01:CDS | 50.0% | |
| TCCTGATGCAGCGAAGTTCT+TGG | + | Chr2:54224055-54224074 | None:intergenic | 50.0% | |
| TCGGCGGTAGAATATTGCCA+CGG | - | Chr2:54224155-54224174 | MsG0280009554.01.T01:CDS | 50.0% | |
| TTCAGAATCATCGCCCATGG+AGG | + | Chr2:54224476-54224495 | None:intergenic | 50.0% | |
| ! | AAGGCATCAAGATCTTCCCC+GGG | + | Chr2:54224316-54224335 | None:intergenic | 50.0% |
| ! | CAAGGCATCAAGATCTTCCC+CGG | + | Chr2:54224317-54224336 | None:intergenic | 50.0% |
| ! | GGCCAAGTGATGGAAAGCTA+AGG | - | Chr2:54224176-54224195 | MsG0280009554.01.T01:CDS | 50.0% |
| AGCTTTCCATCACTTGGCCG+TGG | + | Chr2:54224175-54224194 | None:intergenic | 55.0% | |
| CGGGGAAGATCTTGATGCCT+TGG | - | Chr2:54224315-54224334 | MsG0280009554.01.T01:CDS | 55.0% | |
| CTCAACTGCCATCACACCAC+CGG | + | Chr2:54224758-54224777 | None:intergenic | 55.0% | |
| TCGGGGAGTAGAAATGGCTG+TGG | - | Chr2:54224630-54224649 | MsG0280009554.01.T01:CDS | 55.0% | |
| ! | GGCAACCCATTTAGTTCCGG+TGG | - | Chr2:54224739-54224758 | MsG0280009554.01.T01:CDS | 55.0% |
| CAAGATCTTCCCCGGGAAGC+TGG | + | Chr2:54224309-54224328 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 54223686 | 54224780 | 54223686 | ID=MsG0280009554.01;Name=MsG0280009554.01 |
| Chr2 | mRNA | 54223686 | 54224780 | 54223686 | ID=MsG0280009554.01.T01;Parent=MsG0280009554.01;Name=MsG0280009554.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|364 |
| Chr2 | exon | 54223686 | 54224780 | 54223686 | ID=MsG0280009554.01.T01:exon:20718;Parent=MsG0280009554.01.T01 |
| Chr2 | CDS | 54223686 | 54224780 | 54223686 | ID=MsG0280009554.01.T01:cds;Parent=MsG0280009554.01.T01 |
| Gene Sequence |
| Protein sequence |
