Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014624.01.T01 | KEH34114.1 | 81.723 | 383 | 35 | 4 | 1 | 367 | 1 | 364 | 0 | 613 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014624.01.T01 | Q39134 | 56.231 | 329 | 117 | 3 | 10 | 320 | 16 | 335 | 4.90E-125 | 377 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014624.01.T01 | A0A072UWA1 | 81.723 | 383 | 35 | 4 | 1 | 367 | 1 | 364 | 0.0 | 613 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048068.01 | MsG0380014624.01 | 0.803755 | 2.996825e-49 | 1.518290e-46 |
MsG0080048801.01 | MsG0380014624.01 | 0.843330 | 1.497495e-58 | 2.335271e-55 |
MsG0080048845.01 | MsG0380014624.01 | 0.866475 | 2.775326e-65 | 9.365813e-62 |
MsG0080048912.01 | MsG0380014624.01 | 0.804357 | 2.245391e-49 | 1.155352e-46 |
MsG0080049130.01 | MsG0380014624.01 | 0.851395 | 9.126545e-61 | 1.844835e-57 |
MsG0180000638.01 | MsG0380014624.01 | 0.824342 | 8.503478e-54 | 7.510801e-51 |
MsG0180000646.01 | MsG0380014624.01 | 0.836505 | 8.998060e-57 | 1.136187e-53 |
MsG0180000647.01 | MsG0380014624.01 | 0.824811 | 6.593942e-54 | 5.904103e-51 |
MsG0180000843.01 | MsG0380014624.01 | 0.813342 | 2.686721e-51 | 1.749983e-48 |
MsG0180000989.01 | MsG0380014624.01 | 0.831391 | 1.713864e-55 | 1.857298e-52 |
MsG0180001064.01 | MsG0380014624.01 | 0.819037 | 1.432838e-52 | 1.090499e-49 |
MsG0180001085.01 | MsG0380014624.01 | 0.801415 | 9.101629e-49 | 4.344031e-46 |
MsG0180001100.01 | MsG0380014624.01 | 0.823184 | 1.588178e-53 | 1.357686e-50 |
MsG0180001105.01 | MsG0380014624.01 | 0.813981 | 1.943910e-51 | 1.288211e-48 |
MsG0180001371.01 | MsG0380014624.01 | 0.845314 | 4.388376e-59 | 7.284235e-56 |
MsG0180001685.01 | MsG0380014624.01 | 0.822684 | 2.076206e-53 | 1.750057e-50 |
MsG0180001880.01 | MsG0380014624.01 | 0.840368 | 9.071594e-58 | 1.289399e-54 |
MsG0180003198.01 | MsG0380014624.01 | 0.849555 | 2.998916e-60 | 5.706233e-57 |
MsG0180003316.01 | MsG0380014624.01 | 0.853803 | 1.876155e-61 | 4.103353e-58 |
MsG0180003633.01 | MsG0380014624.01 | 0.817767 | 2.780327e-52 | 2.043179e-49 |
MsG0180004103.01 | MsG0380014624.01 | 0.840737 | 7.258987e-58 | 1.043648e-54 |
MsG0180004542.01 | MsG0380014624.01 | 0.802279 | 6.049144e-49 | 2.951237e-46 |
MsG0180004934.01 | MsG0380014624.01 | 0.848239 | 6.956054e-60 | 1.268313e-56 |
MsG0180004987.01 | MsG0380014624.01 | 0.846773 | 1.759180e-59 | 3.061039e-56 |
MsG0180005039.01 | MsG0380014624.01 | 0.805234 | 1.472714e-49 | 7.750757e-47 |
MsG0180005064.01 | MsG0380014624.01 | 0.812559 | 3.989444e-51 | 2.544662e-48 |
MsG0180005087.01 | MsG0380014624.01 | 0.815607 | 8.478841e-52 | 5.873221e-49 |
MsG0180005568.01 | MsG0380014624.01 | 0.803052 | 4.189593e-49 | 2.084540e-46 |
MsG0180005803.01 | MsG0380014624.01 | 0.822629 | 2.138225e-53 | 1.799668e-50 |
MsG0180005807.01 | MsG0380014624.01 | 0.816904 | 4.347507e-52 | 3.120116e-49 |
MsG0180005821.01 | MsG0380014624.01 | 0.842021 | 3.333833e-58 | 4.988689e-55 |
MsG0180005969.01 | MsG0380014624.01 | 0.834739 | 2.518013e-56 | 3.014862e-53 |
MsG0280010904.01 | MsG0380014624.01 | 0.879023 | 1.747183e-69 | 9.326184e-66 |
MsG0280010905.01 | MsG0380014624.01 | 0.810253 | 1.263790e-50 | 7.580865e-48 |
MsG0280010974.01 | MsG0380014624.01 | 0.833227 | 6.020549e-56 | 6.889779e-53 |
MsG0280010975.01 | MsG0380014624.01 | 0.849370 | 3.377348e-60 | 6.388943e-57 |
MsG0280011270.01 | MsG0380014624.01 | 0.866859 | 2.095293e-65 | 7.167847e-62 |
MsG0280011411.01 | MsG0380014624.01 | 0.849137 | 3.921303e-60 | 7.363302e-57 |
MsG0380011495.01 | MsG0380014624.01 | 0.856073 | 4.116993e-62 | 9.707593e-59 |
MsG0380013472.01 | MsG0380014624.01 | 0.818497 | 1.900507e-52 | 1.424961e-49 |
MsG0380013491.01 | MsG0380014624.01 | 0.804394 | 2.206184e-49 | 1.136201e-46 |
MsG0380013499.01 | MsG0380014624.01 | 0.810787 | 9.689073e-51 | 5.895255e-48 |
MsG0380014053.01 | MsG0380014624.01 | 0.800338 | 1.510699e-48 | 7.016463e-46 |
MsG0380014624.01 | MsG0380014625.01 | 0.823930 | 1.062630e-53 | 9.277888e-51 |
MsG0380014624.01 | MsG0380015501.01 | 0.835391 | 1.724027e-56 | 2.105375e-53 |
MsG0380014624.01 | MsG0380015545.01 | 0.826062 | 3.333019e-54 | 3.092450e-51 |
MsG0380014624.01 | MsG0380015547.01 | 0.805220 | 1.482957e-49 | 7.801620e-47 |
MsG0380014624.01 | MsG0380015603.01 | 0.819195 | 1.319645e-52 | 1.008621e-49 |
MsG0380014624.01 | MsG0380015896.01 | 0.814598 | 1.420027e-51 | 9.569671e-49 |
MsG0380014624.01 | MsG0380015897.01 | 0.807498 | 4.908631e-50 | 2.738377e-47 |
MsG0380014624.01 | MsG0380015898.01 | 0.829703 | 4.438490e-55 | 4.578371e-52 |
MsG0380014624.01 | MsG0380015921.01 | 0.821649 | 3.608672e-53 | 2.953315e-50 |
MsG0380014624.01 | MsG0380016058.01 | 0.803459 | 3.451258e-49 | 1.735275e-46 |
MsG0380014624.01 | MsG0380016192.01 | 0.821928 | 3.111230e-53 | 2.566454e-50 |
MsG0380014624.01 | MsG0380016284.01 | 0.828214 | 1.018187e-54 | 1.005477e-51 |
MsG0380014624.01 | MsG0380016686.01 | 0.818568 | 1.831508e-52 | 1.375832e-49 |
MsG0380014624.01 | MsG0380016751.01 | 0.834618 | 2.700117e-56 | 3.221613e-53 |
MsG0380014624.01 | MsG0380016762.01 | 0.874651 | 5.715976e-68 | 2.593386e-64 |
MsG0380014624.01 | MsG0380017661.01 | 0.803414 | 3.526325e-49 | 1.770953e-46 |
MsG0380014624.01 | MsG0380017728.01 | 0.822405 | 2.410680e-53 | 2.015984e-50 |
MsG0380014624.01 | MsG0380018069.01 | 0.822767 | 1.986343e-53 | 1.678317e-50 |
MsG0380014624.01 | MsG0480018232.01 | 0.817424 | 3.321469e-52 | 2.418048e-49 |
MsG0380014624.01 | MsG0480018324.01 | 0.848370 | 6.399611e-60 | 1.171862e-56 |
MsG0380014624.01 | MsG0480018848.01 | 0.814955 | 1.183779e-51 | 8.054354e-49 |
MsG0380014624.01 | MsG0480019592.01 | 0.804257 | 2.355837e-49 | 1.208994e-46 |
MsG0380014624.01 | MsG0480019971.01 | 0.807540 | 4.809737e-50 | 2.685998e-47 |
MsG0380014624.01 | MsG0480020350.01 | 0.815767 | 7.809783e-52 | 5.433660e-49 |
MsG0380014624.01 | MsG0480020783.01 | 0.848279 | 6.780458e-60 | 1.237996e-56 |
MsG0380014624.01 | MsG0480021168.01 | 0.811714 | 6.098535e-51 | 3.802471e-48 |
MsG0380014624.01 | MsG0480021207.01 | 0.832429 | 9.500188e-56 | 1.061550e-52 |
MsG0380014624.01 | MsG0480021294.01 | 0.815271 | 1.007198e-51 | 6.912281e-49 |
MsG0380014624.01 | MsG0480022260.01 | 0.831306 | 1.799055e-55 | 1.944589e-52 |
MsG0380014624.01 | MsG0480022537.01 | 0.834340 | 3.171089e-56 | 3.752384e-53 |
MsG0380014624.01 | MsG0480022617.01 | 0.826531 | 2.577475e-54 | 2.423550e-51 |
MsG0380014624.01 | MsG0480022624.01 | 0.829521 | 4.913511e-55 | 5.040973e-52 |
MsG0380014624.01 | MsG0480023166.01 | 0.802135 | 6.475592e-49 | 3.147669e-46 |
MsG0380014624.01 | MsG0480023216.01 | 0.812462 | 4.189325e-51 | 2.665461e-48 |
MsG0380014624.01 | MsG0480023367.01 | 0.824894 | 6.302585e-54 | 5.656801e-51 |
MsG0380014624.01 | MsG0480023395.01 | 0.800202 | 1.609590e-48 | 7.449790e-46 |
MsG0380014624.01 | MsG0480023505.01 | 0.806957 | 6.391693e-50 | 3.515823e-47 |
MsG0380014624.01 | MsG0480023565.01 | 0.857044 | 2.133686e-62 | 5.196581e-59 |
MsG0380014624.01 | MsG0480023578.01 | 0.823379 | 1.429943e-53 | 1.229042e-50 |
MsG0380014624.01 | MsG0480023845.01 | 0.805667 | 1.194934e-49 | 6.359269e-47 |
MsG0380014624.01 | MsG0480023989.01 | 0.804700 | 1.904529e-49 | 9.886474e-47 |
MsG0380014624.01 | MsG0480023990.01 | 0.831451 | 1.657382e-55 | 1.799299e-52 |
MsG0380014624.01 | MsG0580024192.01 | 0.833879 | 4.138804e-56 | 4.830091e-53 |
MsG0380014624.01 | MsG0580024537.01 | 0.814056 | 1.870741e-51 | 1.242307e-48 |
MsG0380014624.01 | MsG0580024679.01 | 0.824953 | 6.102480e-54 | 5.486384e-51 |
MsG0380014624.01 | MsG0580024681.01 | 0.817660 | 2.938654e-52 | 2.153158e-49 |
MsG0380014624.01 | MsG0580024717.01 | 0.811589 | 6.491290e-51 | 4.034059e-48 |
MsG0380014624.01 | MsG0580024873.01 | 0.815001 | 1.156102e-51 | 7.876318e-49 |
MsG0380014624.01 | MsG0580025845.01 | 0.804000 | 2.664288e-49 | 1.358397e-46 |
MsG0380014624.01 | MsG0580027082.01 | 0.826697 | 2.352670e-54 | 2.222711e-51 |
MsG0380014624.01 | MsG0580027236.01 | 0.817809 | 2.720459e-52 | 2.001494e-49 |
MsG0380014624.01 | MsG0580028024.01 | 0.830980 | 2.163071e-55 | 2.315713e-52 |
MsG0380014624.01 | MsG0580028073.01 | 0.806391 | 8.416240e-50 | 4.562495e-47 |
MsG0380014624.01 | MsG0580028101.01 | 0.832602 | 8.609108e-56 | 9.669503e-53 |
MsG0380014624.01 | MsG0580028353.01 | 0.813345 | 2.683300e-51 | 1.747894e-48 |
MsG0380014624.01 | MsG0580028723.01 | 0.856629 | 2.827017e-62 | 6.789646e-59 |
MsG0380014624.01 | MsG0580028853.01 | 0.840246 | 9.758215e-58 | 1.381813e-54 |
MsG0380014624.01 | MsG0580028925.01 | 0.847423 | 1.167367e-59 | 2.073936e-56 |
MsG0380014624.01 | MsG0580029414.01 | 0.802796 | 4.733352e-49 | 2.339964e-46 |
MsG0380014624.01 | MsG0580029605.01 | 0.804342 | 2.261879e-49 | 1.163354e-46 |
MsG0380014624.01 | MsG0580029753.01 | 0.807258 | 5.518700e-50 | 3.059508e-47 |
MsG0380014624.01 | MsG0580029912.01 | 0.807224 | 5.610205e-50 | 3.107515e-47 |
MsG0380014624.01 | MsG0680030464.01 | 0.821515 | 3.875992e-53 | 3.159972e-50 |
MsG0380014624.01 | MsG0680031056.01 | 0.811375 | 7.225277e-51 | 4.465069e-48 |
MsG0380014624.01 | MsG0680031715.01 | 0.801634 | 8.208237e-49 | 3.939351e-46 |
MsG0380014624.01 | MsG0680032006.01 | 0.827344 | 1.648165e-54 | 1.586971e-51 |
MsG0380014624.01 | MsG0680032520.01 | 0.828819 | 7.272531e-55 | 7.308821e-52 |
MsG0380014624.01 | MsG0680032559.01 | 0.849639 | 2.841819e-60 | 5.422627e-57 |
MsG0380014624.01 | MsG0680035307.01 | 0.833484 | 5.195162e-56 | 5.990949e-53 |
MsG0380014624.01 | MsG0680035308.01 | 0.879309 | 1.384766e-69 | 7.471681e-66 |
MsG0380014624.01 | MsG0680035731.01 | 0.832043 | 1.184150e-55 | 1.308234e-52 |
MsG0380014624.01 | MsG0780037399.01 | 0.809881 | 1.519334e-50 | 9.025812e-48 |
MsG0380014624.01 | MsG0780037946.01 | 0.847701 | 9.787518e-60 | 1.754497e-56 |
MsG0380014624.01 | MsG0780038571.01 | 0.812559 | 3.988720e-51 | 2.544231e-48 |
MsG0380014624.01 | MsG0780039233.01 | 0.831583 | 1.537587e-55 | 1.675878e-52 |
MsG0380014624.01 | MsG0780039975.01 | 0.848498 | 5.900228e-60 | 1.084998e-56 |
MsG0380014624.01 | MsG0780040094.01 | 0.812831 | 3.478417e-51 | 2.234430e-48 |
MsG0380014624.01 | MsG0780041092.01 | 0.844699 | 6.431312e-59 | 1.046823e-55 |
MsG0380014624.01 | MsG0780041138.01 | 0.801304 | 9.589939e-49 | 4.564402e-46 |
MsG0380014624.01 | MsG0780041272.01 | 0.802692 | 4.972217e-49 | 2.451466e-46 |
MsG0380014624.01 | MsG0780041302.01 | 0.840271 | 9.612129e-58 | 1.362065e-54 |
MsG0380014624.01 | MsG0880041931.01 | 0.813746 | 2.189275e-51 | 1.441647e-48 |
MsG0380014624.01 | MsG0880042343.01 | 0.816800 | 4.588413e-52 | 3.283505e-49 |
MsG0380014624.01 | MsG0880042555.01 | 0.803586 | 3.247749e-49 | 1.638368e-46 |
MsG0380014624.01 | MsG0880042894.01 | 0.825296 | 5.065463e-54 | 4.598499e-51 |
MsG0380014624.01 | MsG0880042931.01 | 0.845388 | 4.190244e-59 | 6.971750e-56 |
MsG0380014624.01 | MsG0880043009.01 | 0.831021 | 2.113394e-55 | 2.265189e-52 |
MsG0380014624.01 | MsG0880043250.01 | 0.848817 | 4.811671e-60 | 8.939867e-57 |
MsG0380014624.01 | MsG0880043278.01 | 0.807330 | 5.329498e-50 | 2.960127e-47 |
MsG0380014624.01 | MsG0880044105.01 | 0.809428 | 1.901736e-50 | 1.116284e-47 |
MsG0380014624.01 | MsG0880044884.01 | 0.867629 | 1.188436e-65 | 4.177515e-62 |
MsG0380014624.01 | MsG0880045044.01 | 0.801562 | 8.490251e-49 | 4.067303e-46 |
MsG0380014624.01 | MsG0880045668.01 | 0.813756 | 2.178382e-51 | 1.434887e-48 |
MsG0380014624.01 | MsG0880046048.01 | 0.817375 | 3.407127e-52 | 2.477045e-49 |
MsG0380014624.01 | MsG0880046723.01 | 0.840870 | 6.699303e-58 | 9.671650e-55 |
MsG0380014624.01 | MsG0880047111.01 | 0.834414 | 3.038821e-56 | 3.603805e-53 |
MsG0380014624.01 | MsG0880047156.01 | 0.855421 | 6.382598e-62 | 1.472817e-58 |
MsG0380014624.01 | MsG0880047157.01 | 0.817510 | 3.177156e-52 | 2.318414e-49 |
MsG0380014624.01 | MsG0880047160.01 | 0.818444 | 1.954352e-52 | 1.463292e-49 |
MsG0380014624.01 | MsG0880047451.01 | 0.800215 | 1.600121e-48 | 7.408508e-46 |
MsG0380014624.01 | MsG0880047519.01 | 0.824753 | 6.804640e-54 | 6.082848e-51 |
MsG0380014624.01 | MsG0880047605.01 | 0.811712 | 6.102384e-51 | 3.804710e-48 |
MsG0280006465.01 | MsG0380014624.01 | 0.808137 | 3.589905e-50 | 2.036467e-47 |
MsG0280006848.01 | MsG0380014624.01 | 0.821655 | 3.597461e-53 | 2.944622e-50 |
MsG0280006896.01 | MsG0380014624.01 | 0.839169 | 1.860984e-57 | 2.548651e-54 |
MsG0280006991.01 | MsG0380014624.01 | 0.803620 | 3.195194e-49 | 1.613197e-46 |
MsG0280007075.01 | MsG0380014624.01 | 0.824608 | 7.361640e-54 | 6.553525e-51 |
MsG0280008103.01 | MsG0380014624.01 | 0.814935 | 1.195463e-51 | 8.129435e-49 |
MsG0280008922.01 | MsG0380014624.01 | 0.805939 | 1.047692e-49 | 5.614819e-47 |
MsG0280010198.01 | MsG0380014624.01 | 0.843088 | 1.737141e-58 | 2.687718e-55 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014624.01.T01 | MTR_3g461440 | 81.723 | 383 | 35 | 4 | 1 | 367 | 1 | 364 | 0.0 | 613 |
MsG0380014624.01.T01 | MTR_3g461470 | 88.393 | 336 | 14 | 2 | 1 | 320 | 1 | 327 | 0.0 | 601 |
MsG0380014624.01.T01 | MTR_3g061390 | 79.762 | 336 | 43 | 2 | 1 | 320 | 1 | 327 | 0.0 | 549 |
MsG0380014624.01.T01 | MTR_3g461430 | 76.968 | 343 | 47 | 4 | 1 | 320 | 1 | 334 | 0.0 | 526 |
MsG0380014624.01.T01 | MTR_5g096840 | 60.434 | 369 | 108 | 6 | 23 | 373 | 29 | 377 | 7.74e-144 | 422 |
MsG0380014624.01.T01 | MTR_3g461440 | 78.862 | 246 | 33 | 3 | 122 | 367 | 1 | 227 | 4.66e-130 | 382 |
MsG0380014624.01.T01 | MTR_3g088465 | 53.916 | 332 | 127 | 3 | 6 | 320 | 17 | 339 | 3.07e-123 | 367 |
MsG0380014624.01.T01 | MTR_8g094290 | 54.630 | 324 | 120 | 3 | 15 | 320 | 23 | 337 | 1.01e-121 | 366 |
MsG0380014624.01.T01 | MTR_3g088475 | 53.916 | 332 | 127 | 3 | 6 | 320 | 17 | 339 | 1.44e-121 | 365 |
MsG0380014624.01.T01 | MTR_3g088455 | 53.474 | 331 | 129 | 2 | 6 | 320 | 17 | 338 | 3.13e-121 | 365 |
MsG0380014624.01.T01 | MTR_1g029750 | 55.015 | 329 | 121 | 3 | 10 | 320 | 22 | 341 | 3.44e-121 | 365 |
MsG0380014624.01.T01 | MTR_3g110660 | 52.047 | 342 | 131 | 4 | 4 | 320 | 8 | 341 | 6.91e-121 | 360 |
MsG0380014624.01.T01 | MTR_3g110660 | 52.047 | 342 | 131 | 4 | 4 | 320 | 8 | 341 | 2.40e-119 | 360 |
MsG0380014624.01.T01 | MTR_1g007380 | 51.543 | 324 | 130 | 3 | 16 | 320 | 16 | 331 | 1.99e-116 | 352 |
MsG0380014624.01.T01 | MTR_4g073520 | 52.410 | 332 | 125 | 3 | 13 | 320 | 49 | 371 | 1.33e-114 | 349 |
MsG0380014624.01.T01 | MTR_4g073520 | 52.410 | 332 | 125 | 3 | 13 | 320 | 49 | 371 | 2.35e-114 | 348 |
MsG0380014624.01.T01 | MTR_3g461480 | 48.329 | 389 | 158 | 8 | 2 | 372 | 9 | 372 | 5.50e-114 | 345 |
MsG0380014624.01.T01 | MTR_1g105980 | 49.263 | 339 | 138 | 5 | 7 | 320 | 1 | 330 | 2.88e-108 | 331 |
MsG0380014624.01.T01 | MTR_3g096840 | 50.296 | 338 | 139 | 4 | 1 | 320 | 19 | 345 | 3.19e-107 | 329 |
MsG0380014624.01.T01 | MTR_3g096800 | 46.175 | 366 | 157 | 4 | 16 | 363 | 26 | 369 | 4.46e-107 | 328 |
MsG0380014624.01.T01 | MTR_1g105995 | 50.779 | 321 | 137 | 3 | 16 | 320 | 14 | 329 | 1.39e-106 | 327 |
MsG0380014624.01.T01 | MTR_3g096830 | 51.524 | 328 | 130 | 4 | 11 | 320 | 14 | 330 | 1.77e-106 | 326 |
MsG0380014624.01.T01 | MTR_1g105990 | 48.837 | 344 | 140 | 6 | 1 | 320 | 1 | 332 | 2.21e-105 | 323 |
MsG0380014624.01.T01 | MTR_5g096850 | 51.746 | 315 | 126 | 3 | 23 | 320 | 25 | 330 | 3.17e-100 | 310 |
MsG0380014624.01.T01 | MTR_1g106000 | 46.809 | 329 | 135 | 5 | 22 | 320 | 14 | 332 | 1.15e-96 | 301 |
MsG0380014624.01.T01 | MTR_1g007270 | 45.938 | 320 | 148 | 3 | 17 | 320 | 27 | 337 | 2.26e-94 | 295 |
MsG0380014624.01.T01 | MTR_3g110420 | 45.312 | 320 | 153 | 3 | 17 | 320 | 18 | 331 | 2.99e-94 | 290 |
MsG0380014624.01.T01 | MTR_3g110420 | 43.620 | 337 | 167 | 4 | 1 | 320 | 1 | 331 | 2.00e-92 | 290 |
MsG0380014624.01.T01 | MTR_1g007180 | 43.034 | 323 | 154 | 4 | 17 | 320 | 6 | 317 | 6.96e-88 | 278 |
MsG0380014624.01.T01 | MTR_2g031750 | 43.827 | 324 | 152 | 6 | 16 | 320 | 5 | 317 | 5.96e-87 | 276 |
MsG0380014624.01.T01 | MTR_1g007240 | 42.188 | 320 | 161 | 5 | 17 | 320 | 6 | 317 | 1.94e-84 | 269 |
MsG0380014624.01.T01 | MTR_3g110430 | 44.410 | 322 | 151 | 4 | 17 | 320 | 55 | 366 | 4.50e-82 | 265 |
MsG0380014624.01.T01 | MTR_5g017200 | 47.490 | 259 | 98 | 5 | 17 | 257 | 26 | 264 | 1.96e-71 | 229 |
MsG0380014624.01.T01 | MTR_2g031750 | 41.016 | 256 | 121 | 6 | 84 | 320 | 6 | 250 | 2.30e-59 | 201 |
MsG0380014624.01.T01 | MTR_1g007180 | 41.714 | 175 | 86 | 4 | 150 | 320 | 71 | 233 | 4.15e-40 | 149 |
MsG0380014624.01.T01 | MTR_1g007190 | 44.872 | 156 | 79 | 4 | 34 | 184 | 21 | 174 | 1.05e-31 | 121 |
MsG0380014624.01.T01 | MTR_7g038910 | 28.000 | 325 | 201 | 7 | 11 | 320 | 16 | 322 | 1.02e-27 | 114 |
MsG0380014624.01.T01 | MTR_6g022790 | 28.205 | 312 | 193 | 6 | 22 | 320 | 41 | 334 | 1.49e-27 | 115 |
MsG0380014624.01.T01 | MTR_7g038910 | 28.000 | 325 | 201 | 7 | 11 | 320 | 16 | 322 | 2.17e-27 | 114 |
MsG0380014624.01.T01 | MTR_3g085820 | 27.389 | 314 | 193 | 7 | 22 | 320 | 32 | 325 | 2.51e-27 | 114 |
MsG0380014624.01.T01 | MTR_4g103890 | 29.073 | 313 | 185 | 8 | 24 | 320 | 11 | 302 | 3.63e-27 | 114 |
MsG0380014624.01.T01 | MTR_7g038910 | 28.000 | 325 | 201 | 7 | 11 | 320 | 16 | 322 | 1.24e-26 | 112 |
MsG0380014624.01.T01 | MTR_0531s0020 | 29.139 | 302 | 179 | 7 | 34 | 320 | 60 | 341 | 9.25e-26 | 108 |
MsG0380014624.01.T01 | MTR_6g023075 | 28.477 | 302 | 181 | 7 | 34 | 320 | 25 | 306 | 2.98e-25 | 108 |
MsG0380014624.01.T01 | MTR_3g005740 | 27.619 | 315 | 195 | 5 | 22 | 320 | 51 | 348 | 3.90e-25 | 108 |
MsG0380014624.01.T01 | MTR_6g023065 | 27.815 | 302 | 183 | 7 | 34 | 320 | 61 | 342 | 5.23e-25 | 108 |
MsG0380014624.01.T01 | MTR_5g054730 | 29.560 | 318 | 192 | 8 | 16 | 320 | 20 | 318 | 5.91e-25 | 107 |
MsG0380014624.01.T01 | MTR_2g101920 | 26.606 | 327 | 206 | 7 | 10 | 320 | 32 | 340 | 1.47e-24 | 107 |
MsG0380014624.01.T01 | MTR_1g093020 | 29.052 | 327 | 194 | 8 | 10 | 320 | 12 | 316 | 3.26e-24 | 105 |
MsG0380014624.01.T01 | MTR_6g022780 | 26.269 | 335 | 203 | 8 | 1 | 320 | 1 | 306 | 7.80e-24 | 104 |
MsG0380014624.01.T01 | MTR_1g093020 | 29.052 | 327 | 194 | 8 | 10 | 320 | 12 | 316 | 1.03e-23 | 103 |
MsG0380014624.01.T01 | MTR_1g093030 | 28.302 | 318 | 191 | 7 | 19 | 320 | 20 | 316 | 1.65e-22 | 100 |
MsG0380014624.01.T01 | MTR_2g096830 | 27.302 | 315 | 194 | 7 | 21 | 320 | 12 | 306 | 2.81e-22 | 98.6 |
MsG0380014624.01.T01 | MTR_8g080120 | 27.564 | 312 | 195 | 5 | 22 | 320 | 22 | 315 | 8.84e-22 | 98.2 |
MsG0380014624.01.T01 | MTR_1g492640 | 24.752 | 303 | 189 | 10 | 34 | 317 | 70 | 352 | 1.91e-14 | 75.5 |
MsG0380014624.01.T01 | MTR_1g492640 | 24.752 | 303 | 189 | 10 | 34 | 317 | 70 | 352 | 2.43e-14 | 75.9 |
MsG0380014624.01.T01 | MTR_1g492640 | 24.752 | 303 | 189 | 10 | 34 | 317 | 52 | 334 | 2.73e-14 | 74.7 |
MsG0380014624.01.T01 | MTR_1g070470 | 25.424 | 354 | 214 | 14 | 14 | 351 | 13 | 332 | 2.83e-14 | 75.5 |
MsG0380014624.01.T01 | MTR_4g055610 | 26.421 | 299 | 185 | 12 | 34 | 315 | 51 | 331 | 3.82e-14 | 75.1 |
MsG0380014624.01.T01 | MTR_4g075750 | 23.986 | 296 | 185 | 7 | 24 | 295 | 71 | 350 | 2.55e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014624.01.T01 | AT1G77380 | 56.231 | 329 | 117 | 3 | 10 | 320 | 16 | 335 | 5.00e-126 | 377 |
MsG0380014624.01.T01 | AT5G09220 | 56.347 | 323 | 114 | 3 | 16 | 320 | 38 | 351 | 7.76e-123 | 369 |
MsG0380014624.01.T01 | AT5G63850 | 55.728 | 323 | 116 | 3 | 16 | 320 | 11 | 324 | 1.16e-120 | 363 |
MsG0380014624.01.T01 | AT5G23810 | 58.951 | 324 | 105 | 4 | 19 | 323 | 21 | 335 | 2.16e-119 | 356 |
MsG0380014624.01.T01 | AT1G44100 | 53.754 | 333 | 121 | 3 | 12 | 320 | 16 | 339 | 4.86e-118 | 357 |
MsG0380014624.01.T01 | AT5G23810 | 58.879 | 321 | 104 | 4 | 19 | 320 | 21 | 332 | 1.09e-116 | 353 |
MsG0380014624.01.T01 | AT1G10010 | 50.294 | 340 | 143 | 4 | 1 | 320 | 2 | 335 | 1.13e-115 | 350 |
MsG0380014624.01.T01 | AT1G10010 | 50.294 | 340 | 143 | 4 | 1 | 320 | 1 | 334 | 1.23e-115 | 350 |
MsG0380014624.01.T01 | AT1G58360 | 50.938 | 320 | 135 | 3 | 17 | 320 | 30 | 343 | 4.66e-111 | 339 |
MsG0380014624.01.T01 | AT5G49630 | 49.850 | 333 | 139 | 4 | 8 | 320 | 17 | 341 | 2.61e-109 | 334 |
MsG0380014624.01.T01 | AT5G23810 | 52.245 | 245 | 89 | 4 | 19 | 244 | 21 | 256 | 6.61e-76 | 241 |
MsG0380014624.01.T01 | AT5G23810 | 52.062 | 194 | 74 | 3 | 19 | 193 | 21 | 214 | 1.87e-57 | 191 |
MsG0380014624.01.T01 | AT5G23810 | 52.062 | 194 | 74 | 3 | 19 | 193 | 21 | 214 | 1.87e-57 | 191 |
MsG0380014624.01.T01 | AT1G71680 | 29.487 | 312 | 190 | 6 | 22 | 320 | 33 | 327 | 2.57e-25 | 107 |
MsG0380014624.01.T01 | AT1G71680 | 29.487 | 312 | 190 | 5 | 22 | 320 | 33 | 327 | 4.43e-24 | 105 |
MsG0380014624.01.T01 | AT5G40780 | 26.282 | 312 | 199 | 6 | 22 | 320 | 32 | 325 | 8.33e-24 | 104 |
MsG0380014624.01.T01 | AT1G61270 | 28.213 | 319 | 186 | 10 | 22 | 320 | 32 | 327 | 8.46e-23 | 101 |
MsG0380014624.01.T01 | AT1G24400 | 26.000 | 300 | 191 | 6 | 34 | 320 | 39 | 320 | 9.72e-23 | 101 |
MsG0380014624.01.T01 | AT5G40780 | 26.441 | 295 | 186 | 6 | 39 | 320 | 1 | 277 | 2.34e-21 | 96.7 |
MsG0380014624.01.T01 | AT5G40780 | 26.441 | 295 | 186 | 6 | 39 | 320 | 1 | 277 | 2.34e-21 | 96.7 |
MsG0380014624.01.T01 | AT3G01760 | 25.397 | 315 | 201 | 7 | 22 | 320 | 30 | 326 | 8.93e-21 | 95.5 |
MsG0380014624.01.T01 | AT1G25530 | 27.301 | 326 | 206 | 6 | 8 | 320 | 12 | 319 | 1.03e-20 | 95.1 |
MsG0380014624.01.T01 | AT1G67640 | 25.478 | 314 | 199 | 7 | 22 | 320 | 27 | 320 | 3.01e-20 | 94.0 |
MsG0380014624.01.T01 | AT1G48640 | 25.321 | 312 | 202 | 6 | 22 | 320 | 39 | 332 | 2.10e-19 | 91.3 |
Find 131 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTACCCAAATAAAATTTA+AGG | 0.135840 | 3:-57448048 | None:intergenic |
TGCAGAAAATGGAAGAATTA+TGG | 0.189183 | 3:+57445616 | MsG0380014624.01.T01:CDS |
GTGTATCTTCTTCCTGTTAC+TGG | 0.215238 | 3:+57447953 | MsG0380014624.01.T01:CDS |
TTGAATTTGAATCATATTCT+TGG | 0.237090 | 3:+57444245 | MsG0380014624.01.T01:five_prime_UTR |
AGAAATCCTGATTCTGTAAC+TGG | 0.252687 | 3:+57444609 | MsG0380014624.01.T01:CDS |
CATATCATCACAGCAGTTAT+TGG | 0.260349 | 3:+57444465 | MsG0380014624.01.T01:CDS |
TGCTTTGGATATGCAGCTTT+TGG | 0.275745 | 3:+57445944 | MsG0380014624.01.T01:CDS |
AATCGCTTTCTTGCAGAAAA+TGG | 0.285740 | 3:+57445605 | MsG0380014624.01.T01:CDS |
CTTGGAACTTTGCGCTTTCA+AGG | 0.292915 | 3:+57447725 | MsG0380014624.01.T01:CDS |
TTCTATAACAATCAGATAAA+AGG | 0.296542 | 3:-57444590 | None:intergenic |
GGAAATCTCTTGACAGGGTT+TGG | 0.296932 | 3:+57445980 | MsG0380014624.01.T01:CDS |
AAATTGGTTCAGGTAATAAA+AGG | 0.299928 | 3:+57444772 | MsG0380014624.01.T01:intron |
TCATTTGGTTGGAGGATATC+AGG | 0.300513 | 3:+57446054 | MsG0380014624.01.T01:CDS |
AGAGAATCAAACAATGAAAA+AGG | 0.309261 | 3:+57445871 | MsG0380014624.01.T01:CDS |
TACCTATGTTGTGGTTGCTT+TGG | 0.310192 | 3:+57445929 | MsG0380014624.01.T01:CDS |
TCCAGAATTGAAAACCATAT+TGG | 0.313766 | 3:+57448234 | MsG0380014624.01.T01:CDS |
TCCTTTACATACTCATTCAT+TGG | 0.319715 | 3:+57445439 | MsG0380014624.01.T01:CDS |
TCAAGAAGGATAATTGAATA+TGG | 0.335571 | 3:-57445725 | None:intergenic |
GCCCCTTGGTTGGCCACATT+GGG | 0.336864 | 3:+57447995 | MsG0380014624.01.T01:CDS |
ATCTTGAAACTCATCCAATA+TGG | 0.336869 | 3:-57448248 | None:intergenic |
AGTTGAGACAGCAGAAAATC+AGG | 0.337199 | 3:-57443743 | None:intergenic |
CTTCAAATTACAAAAGCTTC+TGG | 0.337199 | 3:+57444292 | MsG0380014624.01.T01:CDS |
CTAAAGTTGCTGACAAAATC+TGG | 0.337495 | 3:+57445663 | MsG0380014624.01.T01:CDS |
CAAAATCTGGTTAATCTTCC+AGG | 0.338409 | 3:+57445676 | MsG0380014624.01.T01:CDS |
AACCCTGTCAAGAGATTTCC+TGG | 0.353548 | 3:-57445977 | None:intergenic |
GCAGAAAATGGAAGAATTAT+GGG | 0.355246 | 3:+57445617 | MsG0380014624.01.T01:CDS |
AGAATTATGGGAAGTATAAC+AGG | 0.360907 | 3:+57445629 | MsG0380014624.01.T01:CDS |
CGCTCTTGGTGCCCCTTGGT+TGG | 0.361021 | 3:+57447985 | MsG0380014624.01.T01:CDS |
AATTATCCTTCTTGAGATAC+AGG | 0.364268 | 3:+57445733 | MsG0380014624.01.T01:CDS |
AGCGCAAAGTTCCAAGGCCT+TGG | 0.364335 | 3:-57447718 | None:intergenic |
CAGTGGACAATGGTAAAATT+TGG | 0.369003 | 3:-57448177 | None:intergenic |
ATTACCCAAATAAAATTTAA+GGG | 0.369921 | 3:-57448047 | None:intergenic |
CTCAATATCACCACATTAAG+AGG | 0.370962 | 3:+57448116 | MsG0380014624.01.T01:CDS |
ATCACAGCAGTTATTGGTTC+TGG | 0.378445 | 3:+57444471 | MsG0380014624.01.T01:CDS |
GCGAAATCTGCACCAGTAAC+AGG | 0.383889 | 3:-57447965 | None:intergenic |
TGTTTGTATTATCATTCATT+TGG | 0.384293 | 3:+57446039 | MsG0380014624.01.T01:CDS |
TCTCAACTCTCAAGGAAATC+TGG | 0.386517 | 3:+57443758 | MsG0380014624.01.T01:five_prime_UTR |
GCATGGAGTACTGCTCAATT+AGG | 0.392253 | 3:+57444507 | MsG0380014624.01.T01:CDS |
TGCCCCTTGGTTGGCCACAT+TGG | 0.395586 | 3:+57447994 | MsG0380014624.01.T01:CDS |
AATATATATATGGTGCTGTT+TGG | 0.398778 | 3:+57445340 | MsG0380014624.01.T01:CDS |
ACTGGTGCAGATTTCGCTCT+TGG | 0.402641 | 3:+57447971 | MsG0380014624.01.T01:CDS |
CTCAAGGGTTCCCAAGGCCT+TGG | 0.411683 | 3:+57447707 | MsG0380014624.01.T01:intron |
GGATCTCCATAACTTGGCTT+GGG | 0.421014 | 3:+57445393 | MsG0380014624.01.T01:CDS |
TGTATTATCATTCATTTGGT+TGG | 0.421033 | 3:+57446043 | MsG0380014624.01.T01:CDS |
CTGAAACCCAAGCCAAGTTA+TGG | 0.421752 | 3:-57445399 | None:intergenic |
CGCTTTCAAGGGTCTGTCCA+AGG | 0.436363 | 3:+57447737 | MsG0380014624.01.T01:CDS |
CGGATCTCCATAACTTGGCT+TGG | 0.438990 | 3:+57445392 | MsG0380014624.01.T01:CDS |
ATTGTTTGATTCTCTGGTGG+AGG | 0.441973 | 3:-57445863 | None:intergenic |
AACTAATGTCACCAAGTGCC+TGG | 0.445133 | 3:-57445694 | None:intergenic |
AGAATATGATTCAAATTCAA+TGG | 0.447370 | 3:-57444242 | None:intergenic |
ATTGTCCACTGCACCTGCAC+TGG | 0.451126 | 3:+57448189 | MsG0380014624.01.T01:CDS |
ATTTCGCTCTTGGTGCCCCT+TGG | 0.451734 | 3:+57447981 | MsG0380014624.01.T01:CDS |
ATATGAGGCTAATATATATA+TGG | 0.460365 | 3:+57445330 | MsG0380014624.01.T01:CDS |
CTCGATGGCGGTAACCTGAC+GGG | 0.464089 | 3:-57448282 | None:intergenic |
GCACAACAAAGCAAGAAAAC+TGG | 0.471757 | 3:-57444543 | None:intergenic |
GATGCTGTTAGAGTTAATCT+TGG | 0.473459 | 3:+57444654 | MsG0380014624.01.T01:CDS |
TTCATTGTTTGATTCTCTGG+TGG | 0.473763 | 3:-57445866 | None:intergenic |
ACACCAGGAAATCTCTTGAC+AGG | 0.477743 | 3:+57445974 | MsG0380014624.01.T01:CDS |
CAATGCTCCTTGTAGATATG+AGG | 0.477969 | 3:+57445315 | MsG0380014624.01.T01:CDS |
ATTATCATTCATTTGGTTGG+AGG | 0.478152 | 3:+57446046 | MsG0380014624.01.T01:CDS |
ACTGCTCAATTAGGATGGAT+TGG | 0.481783 | 3:+57444516 | MsG0380014624.01.T01:CDS |
TGAGCTTGTTGTGGCATACC+AGG | 0.483034 | 3:-57448097 | None:intergenic |
CATACCGGATCTCCATAACT+TGG | 0.488256 | 3:+57445387 | MsG0380014624.01.T01:CDS |
AAGTTCTCTGCAGGTTGGAT+TGG | 0.493905 | 3:-57447839 | None:intergenic |
CAGGTTGGATTGGTAATTTG+AGG | 0.494404 | 3:-57447829 | None:intergenic |
TTTAAAGTGTTGGTGGGGAA+TGG | 0.494814 | 3:+57447860 | MsG0380014624.01.T01:CDS |
TTCTGCTGTCTCAACTCTCA+AGG | 0.498417 | 3:+57443750 | MsG0380014624.01.T01:five_prime_UTR |
GTCCCAATGTGGCCAACCAA+GGG | 0.501397 | 3:-57447997 | None:intergenic |
TGGTTAATCTTCCAGGCACT+TGG | 0.501530 | 3:+57445683 | MsG0380014624.01.T01:CDS |
GCGCAAAGTTCCAAGGCCTT+GGG | 0.504430 | 3:-57447717 | None:intergenic |
GACAGCAGAAAATCAGGAAA+AGG | 0.505196 | 3:-57443737 | None:intergenic |
AACACTTTAAAGTTCTCTGC+AGG | 0.511480 | 3:-57447848 | None:intergenic |
TTGAGGAAGTGTGCGATTCG+AGG | 0.513020 | 3:-57447812 | None:intergenic |
GATTGTAATGTCGTTCATAC+CGG | 0.514727 | 3:+57445372 | MsG0380014624.01.T01:CDS |
TTGGAACTTTGCGCTTTCAA+GGG | 0.516228 | 3:+57447726 | MsG0380014624.01.T01:CDS |
TCCAATGAATGAGTATGTAA+AGG | 0.518895 | 3:-57445440 | None:intergenic |
TGCAGAGAACTTTAAAGTGT+TGG | 0.520018 | 3:+57447850 | MsG0380014624.01.T01:CDS |
CTTTAAAGTTCTCTGCAGGT+TGG | 0.523227 | 3:-57447844 | None:intergenic |
GCAGATAAGAACATTTGCAT+TGG | 0.525579 | 3:+57443700 | MsG0380014624.01.T01:five_prime_UTR |
AGAGAACTTTAAAGTGTTGG+TGG | 0.527242 | 3:+57447853 | MsG0380014624.01.T01:CDS |
ATGAATGATAATACAAACAT+TGG | 0.532293 | 3:-57446035 | None:intergenic |
CAAGCCAAGTTATGGAGATC+CGG | 0.534080 | 3:-57445391 | None:intergenic |
GCAATGTCAATAAGCCAGTA+AGG | 0.536074 | 3:-57446013 | None:intergenic |
GAAAAGAAACTACTCTTACA+TGG | 0.536174 | 3:+57444632 | MsG0380014624.01.T01:CDS |
AAGGATAATTGAATATGGAT+AGG | 0.542619 | 3:-57445720 | None:intergenic |
TCATTCATTGGACTAGGACT+TGG | 0.543159 | 3:+57445451 | MsG0380014624.01.T01:CDS |
GAGAACTTTAAAGTGTTGGT+GGG | 0.543400 | 3:+57447854 | MsG0380014624.01.T01:CDS |
AATAAAAGGACTTATGTGGC+TGG | 0.543815 | 3:+57444786 | MsG0380014624.01.T01:CDS |
ACTCTCACCGGTGACAAACC+TGG | 0.543887 | 3:+57448079 | MsG0380014624.01.T01:CDS |
ACATTCTTCTACCTATGTTG+TGG | 0.547579 | 3:+57445920 | MsG0380014624.01.T01:CDS |
TCTGGTGCTTATGATGATGA+TGG | 0.551479 | 3:+57444310 | MsG0380014624.01.T01:CDS |
CATTTCATCAATAGCATGAG+TGG | 0.554154 | 3:-57448146 | None:intergenic |
CTTGTATTAGCGGAACGGAA+TGG | 0.564902 | 3:-57448314 | None:intergenic |
GGTCCCAATGTGGCCAACCA+AGG | 0.566718 | 3:-57447998 | None:intergenic |
AATAAGTTCATTACTCTCAC+CGG | 0.567652 | 3:+57448067 | MsG0380014624.01.T01:CDS |
TCGAGGTTGAAGGAAGTTGT+CGG | 0.569746 | 3:-57447795 | None:intergenic |
TGGCATACCAGGTTTGTCAC+CGG | 0.570492 | 3:-57448086 | None:intergenic |
CCTCGATGGCGGTAACCTGA+CGG | 0.570897 | 3:-57448283 | None:intergenic |
ACATACTCATTCATTGGACT+AGG | 0.574709 | 3:+57445445 | MsG0380014624.01.T01:CDS |
GAAGATACACAGGTAACTGA+AGG | 0.578113 | 3:-57447940 | None:intergenic |
GGAGTACTGCTCAATTAGGA+TGG | 0.581347 | 3:+57444511 | MsG0380014624.01.T01:CDS |
AGGTAATAAAAGGACTTATG+TGG | 0.583654 | 3:+57444782 | MsG0380014624.01.T01:intron |
AATGCACTCAAGGGTTCCCA+AGG | 0.585525 | 3:+57447701 | MsG0380014624.01.T01:intron |
CTTGAAAGCGCAAAGTTCCA+AGG | 0.586192 | 3:-57447724 | None:intergenic |
TCAAATTGTTATCACAAGGA+AGG | 0.587729 | 3:+57445289 | MsG0380014624.01.T01:CDS |
CACCAGGAAATCTCTTGACA+GGG | 0.588202 | 3:+57445975 | MsG0380014624.01.T01:CDS |
GAAATCCTGATTCTGTAACT+GGG | 0.591659 | 3:+57444610 | MsG0380014624.01.T01:CDS |
GCTCAATTAGGATGGATTGG+AGG | 0.591982 | 3:+57444519 | MsG0380014624.01.T01:CDS |
AAGGTACCTGTATCTCAAGA+AGG | 0.593264 | 3:-57445739 | None:intergenic |
AGTGTGCGATTCGAGGTTGA+AGG | 0.596974 | 3:-57447805 | None:intergenic |
AGTGCAGGTGCAGTGGACAA+TGG | 0.598082 | 3:-57448187 | None:intergenic |
AGAACTTTAAAGTGTTGGTG+GGG | 0.598228 | 3:+57447855 | MsG0380014624.01.T01:CDS |
AATGGTCATAGTCTCACAGC+AGG | 0.602002 | 3:+57447878 | MsG0380014624.01.T01:CDS |
TGTAATGAAGATTGCAACCA+TGG | 0.609614 | 3:-57445897 | None:intergenic |
AGATTTGTAGAGTAACACCT+TGG | 0.616299 | 3:-57447754 | None:intergenic |
ATCCAAAGCAACCACAACAT+AGG | 0.618276 | 3:-57445931 | None:intergenic |
TGGTGATATTGAGCTTGTTG+TGG | 0.627788 | 3:-57448106 | None:intergenic |
GAGATCAAATTGTTATCACA+AGG | 0.628087 | 3:+57445285 | MsG0380014624.01.T01:CDS |
ACTTCCTTGTATTAGCGGAA+CGG | 0.636463 | 3:-57448319 | None:intergenic |
ATATTAGCCTCATATCTACA+AGG | 0.637550 | 3:-57445322 | None:intergenic |
GAATGGTCTTGAAACCTCGA+TGG | 0.647239 | 3:-57448297 | None:intergenic |
TCGATGGCGGTAACCTGACG+GGG | 0.660622 | 3:-57448281 | None:intergenic |
CTACAAATCTTGCTTGACAG+TGG | 0.661046 | 3:+57447767 | MsG0380014624.01.T01:CDS |
GCACTAAAATCTGCAATGTG+CGG | 0.661764 | 3:-57448019 | None:intergenic |
TGGAATTTAACCTCTTAATG+TGG | 0.671125 | 3:-57448126 | None:intergenic |
TCCCAATGTGGCCAACCAAG+GGG | 0.672007 | 3:-57447996 | None:intergenic |
GTAACAGGAAGAAGATACAC+AGG | 0.672718 | 3:-57447950 | None:intergenic |
TGGTCTTGAAACCTCGATGG+CGG | 0.674783 | 3:-57448294 | None:intergenic |
AAGATACACAGGTAACTGAA+GGG | 0.677059 | 3:-57447939 | None:intergenic |
CCGTCAGGTTACCGCCATCG+AGG | 0.691884 | 3:+57448283 | MsG0380014624.01.T01:CDS |
TGCAATGTGCGGTCCCAATG+TGG | 0.693068 | 3:-57448008 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+AGG | - | Chr3:57444098-57444079 | None:intergenic | 0.0% |
!! | AATAAAGTAAATCATTATTA+AGG | - | Chr3:57447096-57447115 | None:intergenic | 10.0% |
!! | ATAATATTTATCAATATGTT+AGG | - | Chr3:57443878-57443897 | None:intergenic | 10.0% |
!! | CACTAAAATTATTAAATAAA+TGG | + | Chr3:57446444-57446463 | MsG0380014624.01.T01:intron | 10.0% |
!! | TAATAATGATTTACTTTATT+TGG | + | Chr3:57447096-57447115 | MsG0380014624.01.T01:intron | 10.0% |
!!! | AATAATGATTTACTTTATTT+GGG | + | Chr3:57447097-57447116 | MsG0380014624.01.T01:intron | 10.0% |
!!! | ATTATTGTTTTTAATCTATA+TGG | + | Chr3:57446631-57446650 | MsG0380014624.01.T01:intron | 10.0% |
!! | ATTACCCAAATAAAATTTAA+GGG | - | Chr3:57448050-57448069 | None:intergenic | 15.0% |
!! | TATTACCCAAATAAAATTTA+AGG | - | Chr3:57448051-57448070 | None:intergenic | 15.0% |
!! | TGTATATGAAAAAAATGAAT+TGG | - | Chr3:57444390-57444409 | None:intergenic | 15.0% |
!!! | AATTACTAGTGAATTTTAAT+TGG | - | Chr3:57446099-57446118 | None:intergenic | 15.0% |
!!! | ATAATGATTTACTTTATTTG+GGG | + | Chr3:57447098-57447117 | MsG0380014624.01.T01:intron | 15.0% |
!!! | ATAGGTATTTAAGATATTTA+AGG | + | Chr3:57447171-57447190 | MsG0380014624.01.T01:intron | 15.0% |
!!! | ATATTTATTGTACGAATTTT+AGG | + | Chr3:57445111-57445130 | MsG0380014624.01.T01:intron | 15.0% |
!!! | ATTCATTTTTTTCATATACA+TGG | + | Chr3:57444390-57444409 | MsG0380014624.01.T01:intron | 15.0% |
!!! | ATTTCTGAAAAATAAAGTTT+GGG | - | Chr3:57447352-57447371 | None:intergenic | 15.0% |
!!! | TAGGTATTTAAGATATTTAA+GGG | + | Chr3:57447172-57447191 | MsG0380014624.01.T01:intron | 15.0% |
!!! | TATTTCTGAAAAATAAAGTT+TGG | - | Chr3:57447353-57447372 | None:intergenic | 15.0% |
!!! | TTAACCCTTAAATTTTATTT+GGG | + | Chr3:57448043-57448062 | MsG0380014624.01.T01:CDS | 15.0% |
!!! | TTTAACCCTTAAATTTTATT+TGG | + | Chr3:57448042-57448061 | MsG0380014624.01.T01:CDS | 15.0% |
!!! | TTTAATAATTTTAGTGAAGT+CGG | - | Chr3:57446440-57446459 | None:intergenic | 15.0% |
!! | AAAAGATTTATCTCAAAAGA+AGG | - | Chr3:57446777-57446796 | None:intergenic | 20.0% |
!! | AGAATATGATTCAAATTCAA+TGG | - | Chr3:57444245-57444264 | None:intergenic | 20.0% |
!! | ATAAACAACAAAGATAAACT+AGG | - | Chr3:57444179-57444198 | None:intergenic | 20.0% |
!! | ATAAATATGTATCATTAGCT+TGG | - | Chr3:57445099-57445118 | None:intergenic | 20.0% |
!! | ATATCAAACTTCAAATTTGT+TGG | - | Chr3:57447270-57447289 | None:intergenic | 20.0% |
!! | ATATGAGGCTAATATATATA+TGG | + | Chr3:57445330-57445349 | MsG0380014624.01.T01:CDS | 20.0% |
!! | ATATTTATCAATATGTTAGG+TGG | - | Chr3:57443875-57443894 | None:intergenic | 20.0% |
!! | ATCATATTCTTGGATAAAAA+TGG | + | Chr3:57444255-57444274 | MsG0380014624.01.T01:exon | 20.0% |
!! | ATGAATGATAATACAAACAT+TGG | - | Chr3:57446038-57446057 | None:intergenic | 20.0% |
!! | ATTTGAATATGAAAAGTCTA+AGG | - | Chr3:57445761-57445780 | None:intergenic | 20.0% |
!! | TAACAGTTATAACTTCAAAT+TGG | + | Chr3:57444756-57444775 | MsG0380014624.01.T01:intron | 20.0% |
!! | TGTTTGTATTATCATTCATT+TGG | + | Chr3:57446039-57446058 | MsG0380014624.01.T01:CDS | 20.0% |
!! | TTAAGTTATGATGAATCAAA+AGG | - | Chr3:57446144-57446163 | None:intergenic | 20.0% |
!! | TTATTGTACTAATGAATACA+GGG | + | Chr3:57445255-57445274 | MsG0380014624.01.T01:intron | 20.0% |
!! | TTCTATAACAATCAGATAAA+AGG | - | Chr3:57444593-57444612 | None:intergenic | 20.0% |
!! | TTGAATTTGAATCATATTCT+TGG | + | Chr3:57444245-57444264 | MsG0380014624.01.T01:five_prime_UTR | 20.0% |
!! | TTTATTGTACTAATGAATAC+AGG | + | Chr3:57445254-57445273 | MsG0380014624.01.T01:intron | 20.0% |
!!! | AATTTGAAGTTTGATATTGA+TGG | + | Chr3:57447273-57447292 | MsG0380014624.01.T01:intron | 20.0% |
!!! | ATTTGAAGTTATAACTGTTA+TGG | - | Chr3:57444756-57444775 | None:intergenic | 20.0% |
!!! | TAGTGAATTTTAATTGGTAA+GGG | - | Chr3:57446093-57446112 | None:intergenic | 20.0% |
!!! | TATGGACATTTAATAACTTT+TGG | - | Chr3:57443834-57443853 | None:intergenic | 20.0% |
!!! | TATTTAAGATATTTAAGGGA+TGG | + | Chr3:57447176-57447195 | MsG0380014624.01.T01:intron | 20.0% |
! | AAGGATAATTGAATATGGAT+AGG | - | Chr3:57445723-57445742 | None:intergenic | 25.0% |
! | AATTGTTGTGACAATTATTG+TGG | - | Chr3:57445533-57445552 | None:intergenic | 25.0% |
! | AGAGAATCAAACAATGAAAA+AGG | + | Chr3:57445871-57445890 | MsG0380014624.01.T01:CDS | 25.0% |
! | ATCATAAGTGAGAAAATTAG+TGG | + | Chr3:57447047-57447066 | MsG0380014624.01.T01:intron | 25.0% |
! | ATTCTTGGATAAAAATGGAT+GGG | + | Chr3:57444260-57444279 | MsG0380014624.01.T01:exon | 25.0% |
! | ATTGTTGTGACAATTATTGT+GGG | - | Chr3:57445532-57445551 | None:intergenic | 25.0% |
! | CAAATAACAAAACATAGCAT+AGG | - | Chr3:57446571-57446590 | None:intergenic | 25.0% |
! | TATTCTTGGATAAAAATGGA+TGG | + | Chr3:57444259-57444278 | MsG0380014624.01.T01:exon | 25.0% |
! | TATTGAATTATGTTGAGAAC+AGG | + | Chr3:57445826-57445845 | MsG0380014624.01.T01:intron | 25.0% |
! | TCAAGAAGGATAATTGAATA+TGG | - | Chr3:57445728-57445747 | None:intergenic | 25.0% |
! | TGTATTATCATTCATTTGGT+TGG | + | Chr3:57446043-57446062 | MsG0380014624.01.T01:CDS | 25.0% |
! | TTAATAAAAAGAACAGCACA+TGG | - | Chr3:57443965-57443984 | None:intergenic | 25.0% |
! | TTCATGTAATGTAATAGTAG+TGG | + | Chr3:57447132-57447151 | MsG0380014624.01.T01:intron | 25.0% |
!! | AAATTGGTTCAGGTAATAAA+AGG | + | Chr3:57444772-57444791 | MsG0380014624.01.T01:intron | 25.0% |
!! | ACTTCATTGAAACTTTTGAA+AGG | + | Chr3:57446260-57446279 | MsG0380014624.01.T01:intron | 25.0% |
!! | GACTTATTTCCTTTTCTTTT+AGG | + | Chr3:57444913-57444932 | MsG0380014624.01.T01:intron | 25.0% |
!! | TTATAACTTCAAATTGGTTC+AGG | + | Chr3:57444762-57444781 | MsG0380014624.01.T01:intron | 25.0% |
!! | TTCAATTTTTGACCTTGTAT+GGG | + | Chr3:57444814-57444833 | MsG0380014624.01.T01:intron | 25.0% |
!! | TTTTTCATTGTTTGATTCTC+TGG | - | Chr3:57445872-57445891 | None:intergenic | 25.0% |
!!! | AATATATATATGGTGCTGTT+TGG | + | Chr3:57445340-57445359 | MsG0380014624.01.T01:CDS | 25.0% |
!!! | AATTTTAGGTAGTTTGTTTG+GGG | + | Chr3:57445125-57445144 | MsG0380014624.01.T01:intron | 25.0% |
!!! | CTAGTGAATTTTAATTGGTA+AGG | - | Chr3:57446094-57446113 | None:intergenic | 25.0% |
!!! | CTTCATTGAAACTTTTGAAA+GGG | + | Chr3:57446261-57446280 | MsG0380014624.01.T01:intron | 25.0% |
!!! | CTTTTGAGATAAATCTTTTC+AGG | + | Chr3:57446778-57446797 | MsG0380014624.01.T01:intron | 25.0% |
!!! | GAATTTTAGGTAGTTTGTTT+GGG | + | Chr3:57445124-57445143 | MsG0380014624.01.T01:intron | 25.0% |
!!! | GCTATTTCTATATAGAACAA+AGG | + | Chr3:57444978-57444997 | MsG0380014624.01.T01:intron | 25.0% |
!!! | TATTGAATATTTGTTTCTGC+AGG | + | Chr3:57444420-57444439 | MsG0380014624.01.T01:intron | 25.0% |
AAACTCAACGTCTATATTTC+AGG | - | Chr3:57445585-57445604 | None:intergenic | 30.0% | |
AAATAAAATTGCTAGTCCAG+TGG | - | Chr3:57446835-57446854 | None:intergenic | 30.0% | |
AACTCAACGTCTATATTTCA+GGG | - | Chr3:57445584-57445603 | None:intergenic | 30.0% | |
AACTTATCATTAACCTCAAG+TGG | + | Chr3:57447547-57447566 | MsG0380014624.01.T01:intron | 30.0% | |
AATAAGTTCATTACTCTCAC+CGG | + | Chr3:57448067-57448086 | MsG0380014624.01.T01:CDS | 30.0% | |
AATTATCCTTCTTGAGATAC+AGG | + | Chr3:57445733-57445752 | MsG0380014624.01.T01:CDS | 30.0% | |
AGGTAATAAAAGGACTTATG+TGG | + | Chr3:57444782-57444801 | MsG0380014624.01.T01:intron | 30.0% | |
AGGTTAATGATAAGTTACCA+TGG | - | Chr3:57447543-57447562 | None:intergenic | 30.0% | |
AGTAAGTAGATGACGAAATA+TGG | - | Chr3:57443852-57443871 | None:intergenic | 30.0% | |
AGTGAGAAAATTAGTGGAAA+AGG | + | Chr3:57447053-57447072 | MsG0380014624.01.T01:intron | 30.0% | |
ATCTCAAAAGAAGGTAATAG+AGG | - | Chr3:57446768-57446787 | None:intergenic | 30.0% | |
ATCTTGAAACTCATCCAATA+TGG | - | Chr3:57448251-57448270 | None:intergenic | 30.0% | |
ATGCTAAAAACATGTCTGTT+TGG | - | Chr3:57443908-57443927 | None:intergenic | 30.0% | |
ATTATCATTCATTTGGTTGG+AGG | + | Chr3:57446046-57446065 | MsG0380014624.01.T01:CDS | 30.0% | |
CAAAAGTTTCAATGAAGTGT+CGG | - | Chr3:57446258-57446277 | None:intergenic | 30.0% | |
CAAATAGAGCCTAAAAGAAA+AGG | - | Chr3:57444925-57444944 | None:intergenic | 30.0% | |
CATACAAGGTCAAAAATTGA+AGG | - | Chr3:57444815-57444834 | None:intergenic | 30.0% | |
CTATCAGCTGTACTATATAT+TGG | - | Chr3:57446684-57446703 | None:intergenic | 30.0% | |
CTTCAAATTACAAAAGCTTC+TGG | + | Chr3:57444292-57444311 | MsG0380014624.01.T01:CDS | 30.0% | |
GAAAAGAAACTACTCTTACA+TGG | + | Chr3:57444632-57444651 | MsG0380014624.01.T01:CDS | 30.0% | |
GAGATCAAATTGTTATCACA+AGG | + | Chr3:57445285-57445304 | MsG0380014624.01.T01:CDS | 30.0% | |
GCAGAAAATGGAAGAATTAT+GGG | + | Chr3:57445617-57445636 | MsG0380014624.01.T01:CDS | 30.0% | |
GTACAAAGTACATTTCAACT+GGG | - | Chr3:57446923-57446942 | None:intergenic | 30.0% | |
GTCACAACAATTGCAAAAAA+TGG | + | Chr3:57445541-57445560 | MsG0380014624.01.T01:intron | 30.0% | |
GTTTCATGAATTTGACATGA+GGG | - | Chr3:57446181-57446200 | None:intergenic | 30.0% | |
TAACAAAACATAGCATAGGT+TGG | - | Chr3:57446567-57446586 | None:intergenic | 30.0% | |
TACTTTGTACAGAAGAAAGT+TGG | + | Chr3:57446933-57446952 | MsG0380014624.01.T01:intron | 30.0% | |
TATAAAGGTTACCGATATAC+CGG | - | Chr3:57445156-57445175 | None:intergenic | 30.0% | |
TATAAGGAACTGTATACGTT+TGG | - | Chr3:57444063-57444082 | None:intergenic | 30.0% | |
TATATAGTACAGCTGATAGA+TGG | + | Chr3:57446685-57446704 | MsG0380014624.01.T01:intron | 30.0% | |
TATTGGGAGCTATAAATTTC+TGG | + | Chr3:57446880-57446899 | MsG0380014624.01.T01:intron | 30.0% | |
TCAAATTGTTATCACAAGGA+AGG | + | Chr3:57445289-57445308 | MsG0380014624.01.T01:CDS | 30.0% | |
TCCAATGAATGAGTATGTAA+AGG | - | Chr3:57445443-57445462 | None:intergenic | 30.0% | |
TCCAGAATTGAAAACCATAT+TGG | + | Chr3:57448234-57448253 | MsG0380014624.01.T01:CDS | 30.0% | |
TCCTTTACATACTCATTCAT+TGG | + | Chr3:57445439-57445458 | MsG0380014624.01.T01:CDS | 30.0% | |
TCGCGGAAAAAAAACTATAA+AGG | - | Chr3:57445171-57445190 | None:intergenic | 30.0% | |
TGCAGAAAATGGAAGAATTA+TGG | + | Chr3:57445616-57445635 | MsG0380014624.01.T01:CDS | 30.0% | |
TGGAATTTAACCTCTTAATG+TGG | - | Chr3:57448129-57448148 | None:intergenic | 30.0% | |
TGTACAAAGTACATTTCAAC+TGG | - | Chr3:57446924-57446943 | None:intergenic | 30.0% | |
TGTATACGTTTGGTATGTAT+GGG | - | Chr3:57444053-57444072 | None:intergenic | 30.0% | |
TGTTTCATGAATTTGACATG+AGG | - | Chr3:57446182-57446201 | None:intergenic | 30.0% | |
TTTAATTGGTAAGGGACTAA+GGG | - | Chr3:57446085-57446104 | None:intergenic | 30.0% | |
! | AACAGCTTATAACTTGTATG+AGG | - | Chr3:57445026-57445045 | None:intergenic | 30.0% |
! | AGAATTATGGGAAGTATAAC+AGG | + | Chr3:57445629-57445648 | MsG0380014624.01.T01:CDS | 30.0% |
! | ATATTAGCCTCATATCTACA+AGG | - | Chr3:57445325-57445344 | None:intergenic | 30.0% |
! | CTTCAATTTTTGACCTTGTA+TGG | + | Chr3:57444813-57444832 | MsG0380014624.01.T01:intron | 30.0% |
! | CTTTTCTTTTAGGCTCTATT+TGG | + | Chr3:57444923-57444942 | MsG0380014624.01.T01:intron | 30.0% |
! | GTAAGATTGTTTGATAGTTC+AGG | - | Chr3:57443943-57443962 | None:intergenic | 30.0% |
! | TCCAATATGGTTTTCAATTC+TGG | - | Chr3:57448238-57448257 | None:intergenic | 30.0% |
! | TGAAGTTTTCTGCATATGAT+AGG | - | Chr3:57444215-57444234 | None:intergenic | 30.0% |
! | TTTCTTTTCCTTTATCACGA+AGG | - | Chr3:57447509-57447528 | None:intergenic | 30.0% |
!! | CTAGAAAATGGATTGTTCTA+AGG | + | Chr3:57446964-57446983 | MsG0380014624.01.T01:intron | 30.0% |
!! | TTTTAATTGGTAAGGGACTA+AGG | - | Chr3:57446086-57446105 | None:intergenic | 30.0% |
!!! | CGAATTTTAGGTAGTTTGTT+TGG | + | Chr3:57445123-57445142 | MsG0380014624.01.T01:intron | 30.0% |
AACAATGAAAAAGGCTTCCA+TGG | + | Chr3:57445880-57445899 | MsG0380014624.01.T01:CDS | 35.0% | |
AACTTCAGAAGAGACATAGT+TGG | + | Chr3:57446490-57446509 | MsG0380014624.01.T01:intron | 35.0% | |
AAGATACACAGGTAACTGAA+GGG | - | Chr3:57447942-57447961 | None:intergenic | 35.0% | |
AAGTCGTCCATATTCAAGAA+GGG | - | Chr3:57444898-57444917 | None:intergenic | 35.0% | |
AATAAAAGGACTTATGTGGC+TGG | + | Chr3:57444786-57444805 | MsG0380014624.01.T01:CDS | 35.0% | |
AATCGCTTTCTTGCAGAAAA+TGG | + | Chr3:57445605-57445624 | MsG0380014624.01.T01:CDS | 35.0% | |
ACATACTCATTCATTGGACT+AGG | + | Chr3:57445445-57445464 | MsG0380014624.01.T01:CDS | 35.0% | |
ACATTCTTCTACCTATGTTG+TGG | + | Chr3:57445920-57445939 | MsG0380014624.01.T01:CDS | 35.0% | |
ACTGGGAAATATATAGCCAA+TGG | - | Chr3:57446906-57446925 | None:intergenic | 35.0% | |
AGAAATCCTGATTCTGTAAC+TGG | + | Chr3:57444609-57444628 | MsG0380014624.01.T01:CDS | 35.0% | |
AGATTTGTAGAGTAACACCT+TGG | - | Chr3:57447757-57447776 | None:intergenic | 35.0% | |
AGCAATGTCATTCAAAGTAG+AGG | + | Chr3:57447424-57447443 | MsG0380014624.01.T01:intron | 35.0% | |
ATAGAGGAAGTTTCACTTTG+TGG | - | Chr3:57446752-57446771 | None:intergenic | 35.0% | |
ATATCAACCAAAATGCTGTG+AGG | + | Chr3:57447598-57447617 | MsG0380014624.01.T01:intron | 35.0% | |
ATATTCAAGAAGGGTTGAAC+AGG | - | Chr3:57444889-57444908 | None:intergenic | 35.0% | |
CAAAATCTGGTTAATCTTCC+AGG | + | Chr3:57445676-57445695 | MsG0380014624.01.T01:CDS | 35.0% | |
CAGTGGACAATGGTAAAATT+TGG | - | Chr3:57448180-57448199 | None:intergenic | 35.0% | |
CATATCATCACAGCAGTTAT+TGG | + | Chr3:57444465-57444484 | MsG0380014624.01.T01:CDS | 35.0% | |
CATTTCATCAATAGCATGAG+TGG | - | Chr3:57448149-57448168 | None:intergenic | 35.0% | |
CTAAAGTTGCTGACAAAATC+TGG | + | Chr3:57445663-57445682 | MsG0380014624.01.T01:CDS | 35.0% | |
CTCAATATCACCACATTAAG+AGG | + | Chr3:57448116-57448135 | MsG0380014624.01.T01:CDS | 35.0% | |
CTGTATACGTTTGGTATGTA+TGG | - | Chr3:57444054-57444073 | None:intergenic | 35.0% | |
GAAATCCTGATTCTGTAACT+GGG | + | Chr3:57444610-57444629 | MsG0380014624.01.T01:CDS | 35.0% | |
GAGTTATTCCTTCGTGATAA+AGG | + | Chr3:57447498-57447517 | MsG0380014624.01.T01:intron | 35.0% | |
GATGCTGTTAGAGTTAATCT+TGG | + | Chr3:57444654-57444673 | MsG0380014624.01.T01:CDS | 35.0% | |
GATTGTAATGTCGTTCATAC+CGG | + | Chr3:57445372-57445391 | MsG0380014624.01.T01:CDS | 35.0% | |
GCAGATAAGAACATTTGCAT+TGG | + | Chr3:57443700-57443719 | MsG0380014624.01.T01:five_prime_UTR | 35.0% | |
GTTAGCATTAGTGTAGTGTA+TGG | + | Chr3:57446371-57446390 | MsG0380014624.01.T01:intron | 35.0% | |
TAAGTCGTCCATATTCAAGA+AGG | - | Chr3:57444899-57444918 | None:intergenic | 35.0% | |
TATGCATATGGCTATGTGAT+TGG | - | Chr3:57444013-57444032 | None:intergenic | 35.0% | |
TCAAAAAAATACCCCAACAG+TGG | + | Chr3:57446711-57446730 | MsG0380014624.01.T01:intron | 35.0% | |
TGTAATGAAGATTGCAACCA+TGG | - | Chr3:57445900-57445919 | None:intergenic | 35.0% | |
TGTTCAACCCTTCTTGAATA+TGG | + | Chr3:57444888-57444907 | MsG0380014624.01.T01:intron | 35.0% | |
TTATCATTAACCTCAAGTGG+TGG | + | Chr3:57447550-57447569 | MsG0380014624.01.T01:intron | 35.0% | |
TTCATTGTTTGATTCTCTGG+TGG | - | Chr3:57445869-57445888 | None:intergenic | 35.0% | |
TTGGAACTCACTTCTTTGAA+GGG | - | Chr3:57447251-57447270 | None:intergenic | 35.0% | |
TTGTGACAATTATTGTGGGA+CGG | - | Chr3:57445528-57445547 | None:intergenic | 35.0% | |
! | AGGTTACATTAGCGATTTTC+AGG | + | Chr3:57447898-57447917 | MsG0380014624.01.T01:CDS | 35.0% |
! | CTTTATTTGGGGTTGTACAT+TGG | + | Chr3:57447109-57447128 | MsG0380014624.01.T01:intron | 35.0% |
! | GGTTTTCAGAGTTGTTAGAT+AGG | + | Chr3:57447153-57447172 | MsG0380014624.01.T01:intron | 35.0% |
! | TGGTTTTCAATTCTGGACAA+TGG | - | Chr3:57448231-57448250 | None:intergenic | 35.0% |
! | TTGGATTTTATGAGCCTTAC+TGG | + | Chr3:57445999-57446018 | MsG0380014624.01.T01:CDS | 35.0% |
!! | AACACTTTAAAGTTCTCTGC+AGG | - | Chr3:57447851-57447870 | None:intergenic | 35.0% |
!! | AACCAAGTTCTAGGAGTATT+GGG | + | Chr3:57446864-57446883 | MsG0380014624.01.T01:intron | 35.0% |
!! | AGAACTTTAAAGTGTTGGTG+GGG | + | Chr3:57447855-57447874 | MsG0380014624.01.T01:CDS | 35.0% |
!! | AGAGAACTTTAAAGTGTTGG+TGG | + | Chr3:57447853-57447872 | MsG0380014624.01.T01:CDS | 35.0% |
!! | AGCTATAAATTTCTGGCCAT+TGG | + | Chr3:57446887-57446906 | MsG0380014624.01.T01:intron | 35.0% |
!! | AGGAAATGTAAAAAGTGCTG+TGG | + | Chr3:57444440-57444459 | MsG0380014624.01.T01:intron | 35.0% |
!! | GAGAACTTTAAAGTGTTGGT+GGG | + | Chr3:57447854-57447873 | MsG0380014624.01.T01:CDS | 35.0% |
!! | GGATTTGTTGGATCATTTGA+AGG | + | Chr3:57447023-57447042 | MsG0380014624.01.T01:intron | 35.0% |
!! | TGCAGAGAACTTTAAAGTGT+TGG | + | Chr3:57447850-57447869 | MsG0380014624.01.T01:CDS | 35.0% |
!!! | TAGTTTGTTTGGGGTTTTTC+CGG | + | Chr3:57445134-57445153 | MsG0380014624.01.T01:intron | 35.0% |
ACTGCTCAATTAGGATGGAT+TGG | + | Chr3:57444516-57444535 | MsG0380014624.01.T01:CDS | 40.0% | |
AGCATTAGTGTAGTGTATGG+AGG | + | Chr3:57446374-57446393 | MsG0380014624.01.T01:intron | 40.0% | |
AGCTATGTGATTTCAACCAC+TGG | + | Chr3:57446816-57446835 | MsG0380014624.01.T01:intron | 40.0% | |
AGTTGAGACAGCAGAAAATC+AGG | - | Chr3:57443746-57443765 | None:intergenic | 40.0% | |
ATCCAAAGCAACCACAACAT+AGG | - | Chr3:57445934-57445953 | None:intergenic | 40.0% | |
ATTGTTTGATTCTCTGGTGG+AGG | - | Chr3:57445866-57445885 | None:intergenic | 40.0% | |
CAATGCTCCTTGTAGATATG+AGG | + | Chr3:57445315-57445334 | MsG0380014624.01.T01:CDS | 40.0% | |
CCTAGAACTTGGTTGAAGTA+AGG | - | Chr3:57446858-57446877 | None:intergenic | 40.0% | |
CCTTACTTCAACCAAGTTCT+AGG | + | Chr3:57446855-57446874 | MsG0380014624.01.T01:intron | 40.0% | |
CTACAAATCTTGCTTGACAG+TGG | + | Chr3:57447767-57447786 | MsG0380014624.01.T01:CDS | 40.0% | |
CTGACACAAGTCTATGCATA+TGG | - | Chr3:57444025-57444044 | None:intergenic | 40.0% | |
GAAGATACACAGGTAACTGA+AGG | - | Chr3:57447943-57447962 | None:intergenic | 40.0% | |
GACAGCAGAAAATCAGGAAA+AGG | - | Chr3:57443740-57443759 | None:intergenic | 40.0% | |
GATGGACATGCAAAAAGAAC+TGG | + | Chr3:57444328-57444347 | MsG0380014624.01.T01:CDS | 40.0% | |
GCAATGTCAATAAGCCAGTA+AGG | - | Chr3:57446016-57446035 | None:intergenic | 40.0% | |
GCACAACAAAGCAAGAAAAC+TGG | - | Chr3:57444546-57444565 | None:intergenic | 40.0% | |
GCACTAAAATCTGCAATGTG+CGG | - | Chr3:57448022-57448041 | None:intergenic | 40.0% | |
GTAACAGGAAGAAGATACAC+AGG | - | Chr3:57447953-57447972 | None:intergenic | 40.0% | |
GTGTATCTTCTTCCTGTTAC+TGG | + | Chr3:57447953-57447972 | MsG0380014624.01.T01:CDS | 40.0% | |
GTTGGAACTCACTTCTTTGA+AGG | - | Chr3:57447252-57447271 | None:intergenic | 40.0% | |
TAAACTAGGCTGCATCTACT+AGG | - | Chr3:57444165-57444184 | None:intergenic | 40.0% | |
TACAGAAGAAAGTTGGAGCT+TGG | + | Chr3:57446940-57446959 | MsG0380014624.01.T01:intron | 40.0% | |
TACCTATGTTGTGGTTGCTT+TGG | + | Chr3:57445929-57445948 | MsG0380014624.01.T01:CDS | 40.0% | |
TCATTTGGTTGGAGGATATC+AGG | + | Chr3:57446054-57446073 | MsG0380014624.01.T01:CDS | 40.0% | |
TCTCAACTCTCAAGGAAATC+TGG | + | Chr3:57443758-57443777 | MsG0380014624.01.T01:five_prime_UTR | 40.0% | |
TGATAAGTTACCATGGCGTT+TGG | - | Chr3:57447536-57447555 | None:intergenic | 40.0% | |
TTGGAACTTTGCGCTTTCAA+GGG | + | Chr3:57447726-57447745 | MsG0380014624.01.T01:CDS | 40.0% | |
! | AAGGTACCTGTATCTCAAGA+AGG | - | Chr3:57445742-57445761 | None:intergenic | 40.0% |
! | CTTTTCCCAGTTACAGAATC+AGG | - | Chr3:57444618-57444637 | None:intergenic | 40.0% |
! | TCATTCATTGGACTAGGACT+TGG | + | Chr3:57445451-57445470 | MsG0380014624.01.T01:CDS | 40.0% |
! | TCTGGTGCTTATGATGATGA+TGG | + | Chr3:57444310-57444329 | MsG0380014624.01.T01:CDS | 40.0% |
! | TGATGTTGTCACTTCAGTGT+CGG | - | Chr3:57446297-57446316 | None:intergenic | 40.0% |
! | TTGGAGCTTGGACTAGAAAA+TGG | + | Chr3:57446952-57446971 | MsG0380014624.01.T01:intron | 40.0% |
! | TTGGGGTTTTTCCGGTATAT+CGG | + | Chr3:57445142-57445161 | MsG0380014624.01.T01:intron | 40.0% |
!! | ACAGGAGAAGTACTTCAAAC+TGG | - | Chr3:57444871-57444890 | None:intergenic | 40.0% |
!! | ATCACAGCAGTTATTGGTTC+TGG | + | Chr3:57444471-57444490 | MsG0380014624.01.T01:CDS | 40.0% |
!! | CAACCAAGTTCTAGGAGTAT+TGG | + | Chr3:57446863-57446882 | MsG0380014624.01.T01:intron | 40.0% |
!! | CACAACTTGAGAGTGCTAAA+AGG | - | Chr3:57447627-57447646 | None:intergenic | 40.0% |
!! | CAGGTTGGATTGGTAATTTG+AGG | - | Chr3:57447832-57447851 | None:intergenic | 40.0% |
!! | CTTTAAAGTTCTCTGCAGGT+TGG | - | Chr3:57447847-57447866 | None:intergenic | 40.0% |
!! | CTTTTAGCACTCTCAAGTTG+TGG | + | Chr3:57447625-57447644 | MsG0380014624.01.T01:intron | 40.0% |
!! | TGCTTTGGATATGCAGCTTT+TGG | + | Chr3:57445944-57445963 | MsG0380014624.01.T01:CDS | 40.0% |
!! | TGGTGATATTGAGCTTGTTG+TGG | - | Chr3:57448109-57448128 | None:intergenic | 40.0% |
!! | TTTAAAGTGTTGGTGGGGAA+TGG | + | Chr3:57447860-57447879 | MsG0380014624.01.T01:CDS | 40.0% |
!!! | TGGTTCTGGTGTTTTGTCAT+TGG | + | Chr3:57444485-57444504 | MsG0380014624.01.T01:CDS | 40.0% |
AACCCTGTCAAGAGATTTCC+TGG | - | Chr3:57445980-57445999 | None:intergenic | 45.0% | |
AACTAATGTCACCAAGTGCC+TGG | - | Chr3:57445697-57445716 | None:intergenic | 45.0% | |
AAGAAAACGACCAAACGCCA+TGG | + | Chr3:57447523-57447542 | MsG0380014624.01.T01:intron | 45.0% | |
AATGGTCATAGTCTCACAGC+AGG | + | Chr3:57447878-57447897 | MsG0380014624.01.T01:CDS | 45.0% | |
ACACCAGGAAATCTCTTGAC+AGG | + | Chr3:57445974-57445993 | MsG0380014624.01.T01:CDS | 45.0% | |
AGAGGTCGTGTTGGAGAATT+TGG | + | Chr3:57447661-57447680 | MsG0380014624.01.T01:intron | 45.0% | |
ATCGTTCACAAAGCCACTGT+TGG | - | Chr3:57446727-57446746 | None:intergenic | 45.0% | |
CAAATCCAACCACAGTGACA+AGG | - | Chr3:57447010-57447029 | None:intergenic | 45.0% | |
CAAGCCAAGTTATGGAGATC+CGG | - | Chr3:57445394-57445413 | None:intergenic | 45.0% | |
CACCAGGAAATCTCTTGACA+GGG | + | Chr3:57445975-57445994 | MsG0380014624.01.T01:CDS | 45.0% | |
CATACCGGATCTCCATAACT+TGG | + | Chr3:57445387-57445406 | MsG0380014624.01.T01:CDS | 45.0% | |
CTCCCAATACTCCTAGAACT+TGG | - | Chr3:57446869-57446888 | None:intergenic | 45.0% | |
CTGAAACCCAAGCCAAGTTA+TGG | - | Chr3:57445402-57445421 | None:intergenic | 45.0% | |
CTTGGAACTTTGCGCTTTCA+AGG | + | Chr3:57447725-57447744 | MsG0380014624.01.T01:CDS | 45.0% | |
GACAATTATTGTGGGACGGA+TGG | - | Chr3:57445524-57445543 | None:intergenic | 45.0% | |
GGAAATCTCTTGACAGGGTT+TGG | + | Chr3:57445980-57445999 | MsG0380014624.01.T01:CDS | 45.0% | |
GGATCTCCATAACTTGGCTT+GGG | + | Chr3:57445393-57445412 | MsG0380014624.01.T01:CDS | 45.0% | |
GTCACTGTGGTTGGATTTGT+TGG | + | Chr3:57447011-57447030 | MsG0380014624.01.T01:intron | 45.0% | |
TACATACGAAGAGGTCGTGT+TGG | + | Chr3:57447652-57447671 | MsG0380014624.01.T01:intron | 45.0% | |
TCAACCAAAATGCTGTGAGG+CGG | + | Chr3:57447601-57447620 | MsG0380014624.01.T01:intron | 45.0% | |
TCGAGGTTGAAGGAAGTTGT+CGG | - | Chr3:57447798-57447817 | None:intergenic | 45.0% | |
TCGTTCACAAAGCCACTGTT+GGG | - | Chr3:57446726-57446745 | None:intergenic | 45.0% | |
TGGTTAATCTTCCAGGCACT+TGG | + | Chr3:57445683-57445702 | MsG0380014624.01.T01:CDS | 45.0% | |
TGTGGCTGATACATACGAAG+AGG | + | Chr3:57447643-57447662 | MsG0380014624.01.T01:intron | 45.0% | |
TTCTGCTGTCTCAACTCTCA+AGG | + | Chr3:57443750-57443769 | MsG0380014624.01.T01:five_prime_UTR | 45.0% | |
! | AAGTTCTCTGCAGGTTGGAT+TGG | - | Chr3:57447842-57447861 | None:intergenic | 45.0% |
! | CAAGAAGCACAACAAACTCG+CGG | - | Chr3:57445188-57445207 | None:intergenic | 45.0% |
! | CTGGTGTTTTGTCATTGGCA+TGG | + | Chr3:57444490-57444509 | MsG0380014624.01.T01:CDS | 45.0% |
! | CTTGAAAGCGCAAAGTTCCA+AGG | - | Chr3:57447727-57447746 | None:intergenic | 45.0% |
! | GAATGGTCTTGAAACCTCGA+TGG | - | Chr3:57448300-57448319 | None:intergenic | 45.0% |
!! | GCATGGAGTACTGCTCAATT+AGG | + | Chr3:57444507-57444526 | MsG0380014624.01.T01:CDS | 45.0% |
!! | GCTCAATTAGGATGGATTGG+AGG | + | Chr3:57444519-57444538 | MsG0380014624.01.T01:CDS | 45.0% |
!! | GGAGAAGTACTTCAAACTGG+TGG | - | Chr3:57444868-57444887 | None:intergenic | 45.0% |
!! | GGAGTACTGCTCAATTAGGA+TGG | + | Chr3:57444511-57444530 | MsG0380014624.01.T01:CDS | 45.0% |
!! | ACTAAAATTATTAAATAAAT+GGG | + | Chr3:57446445-57446464 | MsG0380014624.01.T01:intron | 5.0% |
AATGCACTCAAGGGTTCCCA+AGG | + | Chr3:57447701-57447720 | MsG0380014624.01.T01:intron | 50.0% | |
ACTGGTGCAGATTTCGCTCT+TGG | + | Chr3:57447971-57447990 | MsG0380014624.01.T01:CDS | 50.0% | |
AGTGTGCGATTCGAGGTTGA+AGG | - | Chr3:57447808-57447827 | None:intergenic | 50.0% | |
CGGATCTCCATAACTTGGCT+TGG | + | Chr3:57445392-57445411 | MsG0380014624.01.T01:CDS | 50.0% | |
CGTTCACAAAGCCACTGTTG+GGG | - | Chr3:57446725-57446744 | None:intergenic | 50.0% | |
GCGAAATCTGCACCAGTAAC+AGG | - | Chr3:57447968-57447987 | None:intergenic | 50.0% | |
GGCAACACTAGTCCCATACA+AGG | - | Chr3:57444829-57444848 | None:intergenic | 50.0% | |
GTACTTCAAACTGGTGGCTG+TGG | - | Chr3:57444862-57444881 | None:intergenic | 50.0% | |
TCTCATCTCACCACCACTTG+AGG | - | Chr3:57447563-57447582 | None:intergenic | 50.0% | |
TGCTTCCTTGTCACTGTGGT+TGG | + | Chr3:57447002-57447021 | MsG0380014624.01.T01:intron | 50.0% | |
TGCTTGCTTCCTTGTCACTG+TGG | + | Chr3:57446998-57447017 | MsG0380014624.01.T01:intron | 50.0% | |
TGGCATACCAGGTTTGTCAC+CGG | - | Chr3:57448089-57448108 | None:intergenic | 50.0% | |
! | AAGTGGTGGTGAGATGAGAG+TGG | + | Chr3:57447564-57447583 | MsG0380014624.01.T01:intron | 50.0% |
! | GTAGCTGAGTTTTCCAGTGC+AGG | - | Chr3:57448205-57448224 | None:intergenic | 50.0% |
! | TGGTCTTGAAACCTCGATGG+CGG | - | Chr3:57448297-57448316 | None:intergenic | 50.0% |
! | TTGAGGAAGTGTGCGATTCG+AGG | - | Chr3:57447815-57447834 | None:intergenic | 50.0% |
!! | GCTTTTGGAGATGCTACACC+AGG | + | Chr3:57445959-57445978 | MsG0380014624.01.T01:CDS | 50.0% |
!! | TGAGCTTGTTGTGGCATACC+AGG | - | Chr3:57448100-57448119 | None:intergenic | 50.0% |
ACTCTCACCGGTGACAAACC+TGG | + | Chr3:57448079-57448098 | MsG0380014624.01.T01:CDS | 55.0% | |
AGCGCAAAGTTCCAAGGCCT+TGG | - | Chr3:57447721-57447740 | None:intergenic | 55.0% | |
AGTGCAGGTGCAGTGGACAA+TGG | - | Chr3:57448190-57448209 | None:intergenic | 55.0% | |
ATTGTCCACTGCACCTGCAC+TGG | + | Chr3:57448189-57448208 | MsG0380014624.01.T01:CDS | 55.0% | |
CGCTTTCAAGGGTCTGTCCA+AGG | + | Chr3:57447737-57447756 | MsG0380014624.01.T01:CDS | 55.0% | |
GCGCAAAGTTCCAAGGCCTT+GGG | - | Chr3:57447720-57447739 | None:intergenic | 55.0% | |
GGTGGCTGTGGTGAGTACAT+AGG | - | Chr3:57444850-57444869 | None:intergenic | 55.0% | |
GTCCCAATGTGGCCAACCAA+GGG | - | Chr3:57448000-57448019 | None:intergenic | 55.0% | |
TCCCAATGTGGCCAACCAAG+GGG | - | Chr3:57447999-57448018 | None:intergenic | 55.0% | |
TGCAATGTGCGGTCCCAATG+TGG | - | Chr3:57448011-57448030 | None:intergenic | 55.0% | |
! | AAGGCCGCCTCACAGCATTT+TGG | - | Chr3:57447608-57447627 | None:intergenic | 55.0% |
! | GATGTTTTCGCTACCCCGTC+AGG | + | Chr3:57448268-57448287 | MsG0380014624.01.T01:CDS | 55.0% |
! | GTTTTCCAGTGCAGGTGCAG+TGG | - | Chr3:57448197-57448216 | None:intergenic | 55.0% |
!! | ATTTCGCTCTTGGTGCCCCT+TGG | + | Chr3:57447981-57448000 | MsG0380014624.01.T01:CDS | 55.0% |
CTCAAGGGTTCCCAAGGCCT+TGG | + | Chr3:57447707-57447726 | MsG0380014624.01.T01:intron | 60.0% | |
GGTCCCAATGTGGCCAACCA+AGG | - | Chr3:57448001-57448020 | None:intergenic | 60.0% | |
! | CCTCGATGGCGGTAACCTGA+CGG | - | Chr3:57448286-57448305 | None:intergenic | 60.0% |
! | CTCGATGGCGGTAACCTGAC+GGG | - | Chr3:57448285-57448304 | None:intergenic | 60.0% |
! | GCCCCTTGGTTGGCCACATT+GGG | + | Chr3:57447995-57448014 | MsG0380014624.01.T01:CDS | 60.0% |
! | TCGATGGCGGTAACCTGACG+GGG | - | Chr3:57448284-57448303 | None:intergenic | 60.0% |
! | TGCCCCTTGGTTGGCCACAT+TGG | + | Chr3:57447994-57448013 | MsG0380014624.01.T01:CDS | 60.0% |
CCGTCAGGTTACCGCCATCG+AGG | + | Chr3:57448283-57448302 | MsG0380014624.01.T01:CDS | 65.0% | |
!! | CGCTCTTGGTGCCCCTTGGT+TGG | + | Chr3:57447985-57448004 | MsG0380014624.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 57443700 | 57448330 | 57443700 | ID=MsG0380014624.01;Name=MsG0380014624.01 |
Chr3 | mRNA | 57443700 | 57448330 | 57443700 | ID=MsG0380014624.01.T01;Parent=MsG0380014624.01;Name=MsG0380014624.01.T01;_AED=0.32;_eAED=0.35;_QI=128|0.57|0.62|1|0.85|0.75|8|0|525 |
Chr3 | exon | 57443700 | 57443779 | 57443700 | ID=MsG0380014624.01.T01:exon:1636;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57444226 | 57444349 | 57444226 | ID=MsG0380014624.01.T01:exon:1637;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57444442 | 57444675 | 57444442 | ID=MsG0380014624.01.T01:exon:1638;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57444784 | 57444829 | 57444784 | ID=MsG0380014624.01.T01:exon:1639;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57445276 | 57445490 | 57445276 | ID=MsG0380014624.01.T01:exon:1640;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57445594 | 57445754 | 57445594 | ID=MsG0380014624.01.T01:exon:1641;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57445848 | 57446075 | 57445848 | ID=MsG0380014624.01.T01:exon:1642;Parent=MsG0380014624.01.T01 |
Chr3 | exon | 57447713 | 57448330 | 57447713 | ID=MsG0380014624.01.T01:exon:1643;Parent=MsG0380014624.01.T01 |
Chr3 | five_prime_UTR | 57443700 | 57443779 | 57443700 | ID=MsG0380014624.01.T01:five_prime_utr;Parent=MsG0380014624.01.T01 |
Chr3 | five_prime_UTR | 57444226 | 57444273 | 57444226 | ID=MsG0380014624.01.T01:five_prime_utr;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57444274 | 57444349 | 57444274 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57444442 | 57444675 | 57444442 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57444784 | 57444829 | 57444784 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57445276 | 57445490 | 57445276 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57445594 | 57445754 | 57445594 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57445848 | 57446075 | 57445848 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Chr3 | CDS | 57447713 | 57448330 | 57447713 | ID=MsG0380014624.01.T01:cds;Parent=MsG0380014624.01.T01 |
Gene Sequence |
Protein sequence |