AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023395.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023395.01.T01 MTR_8g092170 97.984 645 12 1 80 723 1 645 0.0 1311
MsG0480023395.01.T01 MTR_1g084610 73.362 473 122 2 243 715 113 581 0.0 761
MsG0480023395.01.T01 MTR_4g123030 67.969 512 159 2 208 714 147 658 0.0 758
MsG0480023395.01.T01 MTR_7g111890 60.653 582 210 7 146 723 43 609 0.0 732
MsG0480023395.01.T01 MTR_4g123030 71.285 397 112 1 208 602 147 543 0.0 617
MsG0480023395.01.T01 MTR_1g096140 56.933 476 199 2 225 699 73 543 0.0 585
MsG0480023395.01.T01 MTR_3g117710 55.852 487 209 2 213 699 81 561 0.0 583
MsG0480023395.01.T01 MTR_1g095970 58.515 458 184 2 243 699 89 541 0.0 578
MsG0480023395.01.T01 MTR_4g075540 56.511 407 171 2 243 649 51 451 2.23e-170 496
MsG0480023395.01.T01 MTR_3g015100 69.935 153 46 0 450 602 1 153 8.81e-77 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023395.01.T01 AT5G22510 69.538 650 157 8 82 723 1 617 0.0 905
MsG0480023395.01.T01 AT5G22510 69.538 650 157 8 82 723 1 617 0.0 905
MsG0480023395.01.T01 AT1G56560 74.348 460 116 1 241 700 132 589 0.0 767
MsG0480023395.01.T01 AT3G06500 67.433 522 160 3 204 716 134 654 0.0 761
MsG0480023395.01.T01 AT3G05820 68.031 513 159 3 204 714 112 621 0.0 754
MsG0480023395.01.T01 AT3G06500 71.638 409 115 1 308 716 48 455 0.0 651
MsG0480023395.01.T01 AT3G05820 71.072 401 111 3 204 602 112 509 0.0 615
MsG0480023395.01.T01 AT4G09510 59.737 457 179 1 243 699 95 546 0.0 603
MsG0480023395.01.T01 AT1G35580 60.573 454 174 1 243 696 87 535 0.0 601
MsG0480023395.01.T01 AT1G35580 60.573 454 174 1 243 696 87 535 0.0 601
MsG0480023395.01.T01 AT4G34860 58.710 465 186 2 243 707 109 567 0.0 594
MsG0480023395.01.T01 AT4G34860 58.710 465 186 2 243 707 109 567 0.0 594
MsG0480023395.01.T01 AT4G34860 58.710 465 186 2 243 707 109 567 0.0 594
MsG0480023395.01.T01 AT1G22650 59.251 454 180 1 243 696 72 520 0.0 586
MsG0480023395.01.T01 AT1G72000 57.082 466 195 1 234 699 28 488 0.0 574
MsG0480023395.01.T01 AT4G09510 60.647 371 141 1 243 613 95 460 2.20e-169 494
MsG0480023395.01.T01 AT1G35580 60.160 374 144 1 243 616 87 455 6.62e-168 491
MsG0480023395.01.T01 AT1G22650 58.760 371 148 1 243 613 72 437 1.16e-162 478

Find 187 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATATTAGAGAATATTAT+TGG 0.190575 4:-84654313 MsG0480023395.01.T01:CDS
TTCCTCCCGCGCTTTCCTTT+TGG 0.191105 4:+84653246 None:intergenic
TTATTTCCCATTATTTATTC+TGG 0.241480 4:-84653149 MsG0480023395.01.T01:three_prime_UTR
ATGGTAAATGATATACAAAT+TGG 0.271728 4:+84652925 None:intergenic
CTCTGCAACAGAAGAGGTTT+TGG 0.280737 4:-84656560 MsG0480023395.01.T01:CDS
TTTAAAACCACCATGTCTTT+AGG 0.281032 4:-84658172 MsG0480023395.01.T01:CDS
CGGGCATCCTTTGGAGATTC+AGG 0.282200 4:-84656195 MsG0480023395.01.T01:intron
ATCAGTATGTTTGCTTTACT+TGG 0.283665 4:+84653315 None:intergenic
AATTATTGTGGGAATCCTAT+TGG 0.285852 4:-84657638 MsG0480023395.01.T01:CDS
CAGAAACTGACACTGGTAAA+TGG 0.302109 4:+84657971 None:intergenic
TCATACAATTTGTTCGCAAC+TGG 0.302118 4:+84658071 None:intergenic
TTCAAAACATTGGTACTGTT+TGG 0.308716 4:+84657596 None:intergenic
CTCTGGGGATTTATCTGTTC+AGG 0.310355 4:-84656345 MsG0480023395.01.T01:CDS
CTGCTAACCAGAATAAATAA+TGG 0.311675 4:+84653142 None:intergenic
ATGGATCAGCTGATCTTATA+CGG 0.322618 4:-84654367 MsG0480023395.01.T01:CDS
AACAAAGGAGGCTACTTAAT+TGG 0.324104 4:-84654167 MsG0480023395.01.T01:CDS
TAGATGCAGTACGTGTTCTT+AGG 0.326966 4:+84653936 None:intergenic
AACCAGCTCACATGGATTTC+CGG 0.330359 4:-84654136 MsG0480023395.01.T01:CDS
CCAGATTTCTCCTTGGTTAG+TGG 0.330635 4:-84654201 MsG0480023395.01.T01:CDS
TGAGGCCAAATGGTCGGATT+TGG 0.332213 4:-84654033 MsG0480023395.01.T01:CDS
AAACAGCATGCTAAATATAT+AGG 0.338757 4:-84653106 MsG0480023395.01.T01:three_prime_UTR
GAAATCGATGGGGCCTTAAC+TGG 0.345413 4:+84657993 None:intergenic
TGGTAAATGATATACAAATT+GGG 0.351027 4:+84652926 None:intergenic
GATGTCTGGCTCGACATTCC+AGG 0.356134 4:-84660090 MsG0480023395.01.T01:CDS
AGGATAGCCACTTGAAATCT+TGG 0.356767 4:-84652875 MsG0480023395.01.T01:three_prime_UTR
CGTGTTGCTCCTGTTGATTC+CGG 0.364802 4:-84656508 MsG0480023395.01.T01:intron
GGGCATACACGGGCATCCTT+TGG 0.367981 4:-84656204 MsG0480023395.01.T01:CDS
TTGTCATCCAATGTTACAAA+TGG 0.378488 4:-84657743 MsG0480023395.01.T01:CDS
GGCCTCAATAAGATCCAATA+TGG 0.382722 4:+84654049 None:intergenic
ATCTTCGATTGCAATTCATT+TGG 0.388062 4:-84653195 MsG0480023395.01.T01:three_prime_UTR
CTGGCCATCACTTCTCTGGC+AGG 0.392960 4:-84653817 MsG0480023395.01.T01:intron
GGAACAATCACATGCCATAT+TGG 0.401885 4:-84654063 MsG0480023395.01.T01:CDS
GTGGCTATCCTTGAATTCTA+TGG 0.407699 4:+84652887 None:intergenic
GCCACTCAAGATTTGTTATC+CGG 0.408700 4:-84654000 MsG0480023395.01.T01:CDS
ACGAAAAGATCTCGATTCAT+TGG 0.409792 4:-84653408 MsG0480023395.01.T01:CDS
ATGGCCAGGAGCCTCCATTA+TGG 0.412090 4:+84653832 None:intergenic
TGCTAACCAGAATAAATAAT+GGG 0.415718 4:+84653143 None:intergenic
TTTCAGACATGGTCAATTGC+GGG 0.416114 4:-84653369 MsG0480023395.01.T01:CDS
CGAGCATATGGAAAATGCTC+TGG 0.418767 4:-84656362 MsG0480023395.01.T01:CDS
TTTGCAGCAATAGTTCCAAT+AGG 0.419547 4:+84657623 None:intergenic
TATCATACTCTCCCTTCAAT+AGG 0.421624 4:+84657525 None:intergenic
GCTCCTGGCCATCACTTCTC+TGG 0.423609 4:-84653821 MsG0480023395.01.T01:CDS
TGCCACCAAATCCGACCATT+TGG 0.424995 4:+84654028 None:intergenic
AACCAAGGAGAAATCTGGTC+TGG 0.425338 4:+84654206 None:intergenic
AGATGTTCAACTGTTGGAAC+AGG 0.430733 4:-84657777 MsG0480023395.01.T01:CDS
TGTAACCGCCATAGAATTCA+AGG 0.431530 4:-84652895 MsG0480023395.01.T01:three_prime_UTR
ATTAAGTAGCCTCCTTTGTT+CGG 0.435238 4:+84654170 None:intergenic
AGGCCTTGGTCTTACCATAA+TGG 0.446670 4:-84653846 MsG0480023395.01.T01:CDS
TGGAGTCGCTTTCCTATTGA+AGG 0.447362 4:-84657537 MsG0480023395.01.T01:CDS
GCATGCTAAATATATAGGTT+TGG 0.448339 4:-84653101 MsG0480023395.01.T01:three_prime_UTR
ATTTGTTATCCGGCTCTTGA+AGG 0.449396 4:-84653990 MsG0480023395.01.T01:CDS
TTATCCGGCTCTTGAAGGTC+AGG 0.451665 4:-84653985 MsG0480023395.01.T01:CDS
TAAGGTTCGGACAGTTCCTC+TGG 0.452150 4:-84656593 MsG0480023395.01.T01:CDS
GACTTTGGAGAGGCAGCCAT+TGG 0.458365 4:-84656532 MsG0480023395.01.T01:CDS
TTGAAGCTTTGTCTTGCTGA+TGG 0.459012 4:-84656287 MsG0480023395.01.T01:CDS
AATGTGAGCGGCATAACTTC+AGG 0.459764 4:-84657890 MsG0480023395.01.T01:CDS
TTGATTAATGCCAACCCAAA+AGG 0.460057 4:-84653261 MsG0480023395.01.T01:CDS
TTGCCATGTCCTCAAGTGAT+TGG 0.460748 4:-84659893 MsG0480023395.01.T01:CDS
GAGAGAGTTGATGTGCAAAC+AGG 0.461295 4:-84656323 MsG0480023395.01.T01:CDS
TTATACGGGCACTGAACAAT+CGG 0.461373 4:-84654352 MsG0480023395.01.T01:CDS
CATTTACATGTCTGCAACCA+TGG 0.467885 4:+84657926 None:intergenic
GAGTCTGTAGTTAATTATTG+TGG 0.473580 4:-84657650 MsG0480023395.01.T01:CDS
CTGCAACCATGGATGACTAT+AGG 0.473890 4:+84657937 None:intergenic
GGTAAATGATATACAAATTG+GGG 0.475207 4:+84652927 None:intergenic
GGCCAAATGGTCGGATTTGG+TGG 0.475817 4:-84654030 MsG0480023395.01.T01:CDS
TCTTCATACACTTCAGCTGC+AGG 0.476188 4:-84657486 MsG0480023395.01.T01:intron
CCACTAACCAAGGAGAAATC+TGG 0.479615 4:+84654201 None:intergenic
GCATGCTTCAAAGCCAGTTA+AGG 0.480695 4:-84658006 MsG0480023395.01.T01:CDS
TCAGTATGTTTGCTTTACTT+GGG 0.481398 4:+84653316 None:intergenic
ATGGCTGCCTCTCCAAAGTC+AGG 0.485283 4:+84656535 None:intergenic
GTTTGAAGATGTTCAACTGT+TGG 0.485786 4:-84657783 MsG0480023395.01.T01:CDS
CCATCAGTTACTAATAATGT+TGG 0.490435 4:+84656251 None:intergenic
AGTCTGTAGTTAATTATTGT+GGG 0.491436 4:-84657649 MsG0480023395.01.T01:CDS
TGTCATCCAATGTTACAAAT+GGG 0.492423 4:-84657742 MsG0480023395.01.T01:CDS
CAGGAGACGGTAATGGATCA+AGG 0.493037 4:-84657871 MsG0480023395.01.T01:CDS
TTTCTCCTTGGTTAGTGGAG+TGG 0.493135 4:-84654196 MsG0480023395.01.T01:CDS
AGAATGGAAGGTTGTGGCTA+TGG 0.493981 4:-84660012 MsG0480023395.01.T01:CDS
GGCAGTCCCATTTGTAACAT+TGG 0.495902 4:+84657736 None:intergenic
GTGGTCTGTTGTCAGTAGTA+TGG 0.495960 4:-84654093 MsG0480023395.01.T01:CDS
CGCGAAATGAAGAAGAAGAA+TGG 0.497227 4:-84660028 MsG0480023395.01.T01:CDS
AACTGGGAAGTGTTGACAAA+AGG 0.497494 4:+84658088 None:intergenic
CTGCCAGAGAAGTGATGGCC+AGG 0.502165 4:+84653818 None:intergenic
TGGATCTTATTGAGGCCAAA+TGG 0.504361 4:-84654043 MsG0480023395.01.T01:CDS
GAGCATATGGAAAATGCTCT+GGG 0.507897 4:-84656361 MsG0480023395.01.T01:CDS
CATCAGTTACTAATAATGTT+GGG 0.514916 4:+84656252 None:intergenic
TGCCATATTGGATCTTATTG+AGG 0.522196 4:-84654051 MsG0480023395.01.T01:CDS
ACCCAGACCAGATTTCTCCT+TGG 0.522729 4:-84654208 MsG0480023395.01.T01:CDS
CACTCCTGACCTTCAAGAGC+CGG 0.522930 4:+84653981 None:intergenic
CATACAATTTGTTCGCAACT+GGG 0.525650 4:+84658072 None:intergenic
TATTGGAACTATTGCTGCAA+AGG 0.528262 4:-84657621 MsG0480023395.01.T01:CDS
CCAACATTATTAGTAACTGA+TGG 0.529599 4:-84656251 MsG0480023395.01.T01:CDS
AAATATGATGTCAATACTTG+AGG 0.529817 4:-84653028 MsG0480023395.01.T01:three_prime_UTR
CTCTATTGAGGAAGAAGCGT+GGG 0.531182 4:-84657684 MsG0480023395.01.T01:CDS
GGCTCAGTATACGCGGATTG+AGG 0.533348 4:+84658109 None:intergenic
ACCAAGGAGAAATCTGGTCT+GGG 0.534821 4:+84654207 None:intergenic
GCAGGCATCAAACCTTGTCC+TGG 0.538634 4:+84656622 None:intergenic
CACTGGTAAATGGAAATCGA+TGG 0.539558 4:+84657981 None:intergenic
AACCGGAAATCCATGTGAGC+TGG 0.541172 4:+84654134 None:intergenic
ACCCAAAAGGAAAGCGCGGG+AGG 0.541698 4:-84653248 MsG0480023395.01.T01:CDS
CATCTCACGTGCACAACGTA+AGG 0.542973 4:+84654403 None:intergenic
TTCCAGGTGAAGGTGATGCT+TGG 0.545964 4:-84660074 MsG0480023395.01.T01:CDS
TAACTTACAACCAGCTCACA+TGG 0.546165 4:-84654144 MsG0480023395.01.T01:CDS
AAACATACTGATAACTGAAG+AGG 0.547667 4:-84653304 MsG0480023395.01.T01:CDS
AGATCAGCTGATCCATCCTC+AGG 0.548249 4:+84654374 None:intergenic
AATAGGAAAGCGACTCCAGA+TGG 0.548635 4:+84657542 None:intergenic
AATTAGCCTCAACTCTATTG+AGG 0.549466 4:-84657696 MsG0480023395.01.T01:CDS
GTCCGAACCTTAAAACTAGC+AGG 0.549954 4:+84656604 None:intergenic
CAGGAGTGGCAGATAATCAC+TGG 0.554473 4:-84653966 MsG0480023395.01.T01:CDS
GCAGACATGTAAATGCCAAA+AGG 0.561090 4:-84657918 MsG0480023395.01.T01:CDS
AACAGGAGCAACACGGCCAA+TGG 0.563132 4:+84656516 None:intergenic
ACTGGTAAATGGAAATCGAT+GGG 0.563971 4:+84657982 None:intergenic
GTTTCAGACATGGTCAATTG+CGG 0.565248 4:-84653370 MsG0480023395.01.T01:CDS
TGGCCAATCACTTGAGGACA+TGG 0.566735 4:+84659890 None:intergenic
ATAACTTCAGGAGACGGTAA+TGG 0.567558 4:-84657878 MsG0480023395.01.T01:CDS
GATCGAAGGATGGGCATACA+CGG 0.567712 4:-84656215 MsG0480023395.01.T01:CDS
AGAAAAGATCCTCAAGGCAT+AGG 0.570915 4:-84658048 MsG0480023395.01.T01:CDS
CTTGAGGATTAAGTAGCATA+CGG 0.571054 4:-84653012 MsG0480023395.01.T01:three_prime_UTR
ACAATGGATTGTCATAGTCC+AGG 0.574008 4:-84656640 MsG0480023395.01.T01:CDS
TTGGTCATAATTCAAAACAT+TGG 0.578110 4:+84657586 None:intergenic
ATCGAAGATTCATACAATGT+AGG 0.578892 4:+84653209 None:intergenic
CCACGTTGGCCAATCACTTG+AGG 0.579491 4:+84659884 None:intergenic
CCAACCCAAAAGGAAAGCGC+GGG 0.582506 4:-84653251 MsG0480023395.01.T01:CDS
GCCAACCCAAAAGGAAAGCG+CGG 0.585494 4:-84653252 MsG0480023395.01.T01:CDS
AGAAGAAGAATGGAAGGTTG+TGG 0.585966 4:-84660018 MsG0480023395.01.T01:CDS
AAACGTTAACTTTGTACAGG+TGG 0.586954 4:+84659857 None:intergenic
CTTACCATAATGGAGGCTCC+TGG 0.587241 4:-84653836 MsG0480023395.01.T01:CDS
CAAACCTGCCAGAGAAGTGA+TGG 0.587691 4:+84653813 None:intergenic
ACGGGCACTGAACAATCGGC+TGG 0.589732 4:-84654348 MsG0480023395.01.T01:CDS
TGGATCAGCTGATCTTATAC+GGG 0.592987 4:-84654366 MsG0480023395.01.T01:CDS
CAAGCAGCAGCTTTGACACA+AGG 0.593252 4:+84653343 None:intergenic
AACCAAGCATCACCTTCACC+TGG 0.594058 4:+84660072 None:intergenic
CTTCTTCCTCAATAGAGTTG+AGG 0.599582 4:+84657690 None:intergenic
TCTTATTGAGGCCAAATGGT+CGG 0.600264 4:-84654039 MsG0480023395.01.T01:CDS
TGGCTCGACATTCCAGGTGA+AGG 0.604140 4:-84660084 MsG0480023395.01.T01:CDS
TTGCATGATAGATCGAAGGA+TGG 0.604658 4:-84656225 MsG0480023395.01.T01:CDS
ATCGAAGGATGGGCATACAC+GGG 0.608184 4:-84656214 MsG0480023395.01.T01:CDS
AGCGGCATAACTTCAGGAGA+CGG 0.611888 4:-84657884 MsG0480023395.01.T01:CDS
ATAAGACCTATAGTCATCCA+TGG 0.612582 4:-84657943 MsG0480023395.01.T01:CDS
GGAGTCGCTTTCCTATTGAA+GGG 0.613769 4:-84657536 MsG0480023395.01.T01:CDS
AAATGAAGAAGAAGAATGGA+AGG 0.614855 4:-84660024 MsG0480023395.01.T01:CDS
CAAGCGTCCAAGATTTCAAG+TGG 0.616339 4:+84652868 None:intergenic
TCAGAGCTGGGAGAAAACAA+TGG 0.616598 4:-84656656 MsG0480023395.01.T01:intron
TAAAATCACGAATAAAGACT+TGG 0.617406 4:+84657567 None:intergenic
GAGATGCTTACTCCTGAGGA+TGG 0.617558 4:-84654386 MsG0480023395.01.T01:CDS
TGATGACTCTGCAACAGAAG+AGG 0.617863 4:-84656566 MsG0480023395.01.T01:CDS
GAGTGGATGCCGAACAAAGG+AGG 0.619198 4:-84654179 MsG0480023395.01.T01:CDS
AAGAAGCGTGGGATCTACTG+AGG 0.619813 4:-84657673 MsG0480023395.01.T01:CDS
CCTCAAGTGATTGGCCAACG+TGG 0.622788 4:-84659884 MsG0480023395.01.T01:CDS
TGCATGATAGATCGAAGGAT+GGG 0.624079 4:-84656224 MsG0480023395.01.T01:CDS
AACATGTGATCTCAGGGCTG+TGG 0.624246 4:-84656400 MsG0480023395.01.T01:intron
GTGGAGTGGATGCCGAACAA+AGG 0.624360 4:-84654182 MsG0480023395.01.T01:CDS
CGCGGATTGAGGAACAACAC+TGG 0.624803 4:+84658120 None:intergenic
ATGTGATCTCAGGGCTGTGG+TGG 0.627914 4:-84656397 MsG0480023395.01.T01:intron
GTTCGGACAGTTCCTCTGGA+AGG 0.631939 4:-84656589 MsG0480023395.01.T01:CDS
AGTCTCAGTTGTTTCAGACA+TGG 0.632889 4:-84653380 MsG0480023395.01.T01:CDS
GTAAACACCTGAATCTCCAA+AGG 0.633620 4:+84656188 None:intergenic
TTCTTCATTTCGCGACCCAG+AGG 0.635438 4:+84660037 None:intergenic
GACGTATATCAAGAGACAAG+TGG 0.638198 4:-84653446 MsG0480023395.01.T01:CDS
AGTACTCCTCTGTCTTGTAA+CGG 0.638711 4:+84654261 None:intergenic
TTTGGATCCTGACTTTGGAG+AGG 0.640365 4:-84656542 MsG0480023395.01.T01:CDS
GTTCTTGCATGATAGATCGA+AGG 0.640874 4:-84656229 MsG0480023395.01.T01:CDS
GCTATCCTTGAATTCTATGG+CGG 0.644572 4:+84652890 None:intergenic
GCCGGATAACAAATCTTGAG+TGG 0.648159 4:+84653999 None:intergenic
GACAAAAGGCTCAGTATACG+CGG 0.649075 4:+84658102 None:intergenic
CCTTGGTCTTACCATAATGG+AGG 0.649693 4:-84653843 MsG0480023395.01.T01:CDS
AGAAGCGTGGGATCTACTGA+GGG 0.653271 4:-84657672 MsG0480023395.01.T01:CDS
GGCATCCACTCCACTAACCA+AGG 0.654302 4:+84654191 None:intergenic
GTATGAAGAAAAGATCCTCA+AGG 0.656724 4:-84658054 MsG0480023395.01.T01:CDS
CGGCTCTTGAAGGTCAGGAG+TGG 0.658366 4:-84653980 MsG0480023395.01.T01:CDS
GATTGTCATAGTCCAGGACA+AGG 0.659837 4:-84656634 MsG0480023395.01.T01:CDS
CGGAATCAACAGGAGCAACA+CGG 0.660716 4:+84656509 None:intergenic
GGAAGCACCTAAAGACATGG+TGG 0.668159 4:+84658165 None:intergenic
TTTGGAAGCACCTAAAGACA+TGG 0.673157 4:+84658162 None:intergenic
GTAAATGATATACAAATTGG+GGG 0.673415 4:+84652928 None:intergenic
ATAGTCACAGAAACTGACAC+TGG 0.676501 4:+84657964 None:intergenic
TTGTGGCTATGGTGAGATCA+CGG 0.682170 4:-84660001 MsG0480023395.01.T01:intron
AATTTACCGTTACAAGACAG+AGG 0.684719 4:-84654267 MsG0480023395.01.T01:CDS
GTACAGGTGGCTCTCCACGT+TGG 0.684795 4:+84659870 None:intergenic
GGCATGTGATTGTTCCTCTG+TGG 0.685624 4:+84654070 None:intergenic
CAAAAGGCTGAAAATGTGAG+CGG 0.689069 4:-84657902 MsG0480023395.01.T01:CDS
ACTCTATTGAGGAAGAAGCG+TGG 0.689990 4:-84657685 MsG0480023395.01.T01:CDS
GCAGAGTCATCACCTTCCAG+AGG 0.695873 4:+84656577 None:intergenic
ACGTGAGATGCTTACTCCTG+AGG 0.707533 4:-84654390 MsG0480023395.01.T01:CDS
CCTCCATTATGGTAAGACCA+AGG 0.711037 4:+84653843 None:intergenic
TGTCAGTAGTATGGCCACAG+AGG 0.719456 4:-84654084 MsG0480023395.01.T01:CDS
CTGGTAAATGGAAATCGATG+GGG 0.725256 4:+84657983 None:intergenic
AGCATATGGAAAATGCTCTG+GGG 0.753456 4:-84656360 MsG0480023395.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATGAAAAAGATTTAAT+AGG + Chr4:84659281-84659300 None:intergenic 10.0%
!!! TGAAAGATTTTTTATAAAAA+GGG + Chr4:84655714-84655733 None:intergenic 10.0%
!!! TTGAAAGATTTTTTATAAAA+AGG + Chr4:84655715-84655734 None:intergenic 10.0%
!!! TTTGTTTTTTTAATTAATAC+CGG - Chr4:84654513-84654532 MsG0480023395.01.T01:intron 10.0%
!!! TTTTATTTAATTTTTTTTGC+AGG - Chr4:84659053-84659072 MsG0480023395.01.T01:intron 10.0%
!! AAAAAAAAAAAACCTAGAAT+TGG - Chr4:84654133-84654152 MsG0480023395.01.T01:CDS 15.0%
!! AAAACAAAATATAAAAAGCT+TGG + Chr4:84657592-84657611 None:intergenic 15.0%
!! AATAAACTAAATGCAATATA+AGG - Chr4:84657209-84657228 MsG0480023395.01.T01:intron 15.0%
!! ACAATTGTAATAAAAGAATA+TGG + Chr4:84653827-84653846 None:intergenic 15.0%
!! TGCAATCTAAAAATAAAATT+CGG + Chr4:84659161-84659180 None:intergenic 15.0%
!! TTCATATTAGAGAATATTAT+TGG - Chr4:84658606-84658625 MsG0480023395.01.T01:intron 15.0%
!!! AAACTGAAGTATTATTTATT+GGG + Chr4:84653547-84653566 None:intergenic 15.0%
!!! AGATAACTATTTTTTTTACT+AGG + Chr4:84653782-84653801 None:intergenic 15.0%
!!! TAAACTGAAGTATTATTTAT+TGG + Chr4:84653548-84653567 None:intergenic 15.0%
!!! TAAATAACTCTTTTCATTAA+AGG - Chr4:84656106-84656125 MsG0480023395.01.T01:intron 15.0%
!! AAACTTAACATAATACTTCT+TGG - Chr4:84656480-84656499 MsG0480023395.01.T01:intron 20.0%
!! AATTGTTGAAACTACAAAAA+AGG - Chr4:84657320-84657339 MsG0480023395.01.T01:intron 20.0%
!! AGTTTCTAATAAAACAGTTA+AGG + Chr4:84654412-84654431 None:intergenic 20.0%
!! ATGGTAAATGATATACAAAT+TGG + Chr4:84659997-84660016 None:intergenic 20.0%
!! ATTGACACATTTAAAAGTTA+AGG - Chr4:84653145-84653164 MsG0480023395.01.T01:three_prime_UTR 20.0%
!! GAGAAGAAAAAATAAGTTAA+GGG - Chr4:84653177-84653196 MsG0480023395.01.T01:three_prime_UTR 20.0%
!! GCAATCTAAAAATAAAATTC+GGG + Chr4:84659160-84659179 None:intergenic 20.0%
!! TGAGAAGAAAAAATAAGTTA+AGG - Chr4:84653176-84653195 MsG0480023395.01.T01:three_prime_UTR 20.0%
!! TGCATTTATTTAGATAGATT+GGG - Chr4:84656851-84656870 MsG0480023395.01.T01:intron 20.0%
!! TGGTAAATGATATACAAATT+GGG + Chr4:84659996-84660015 None:intergenic 20.0%
!! TGTTTAGAGATAAATGTAAT+TGG - Chr4:84653468-84653487 MsG0480023395.01.T01:CDS 20.0%
!! TTACAAGTTACAATTAAAGA+TGG - Chr4:84658407-84658426 MsG0480023395.01.T01:intron 20.0%
!! TTACCATTTGTATCTTAATT+AGG - Chr4:84654471-84654490 MsG0480023395.01.T01:intron 20.0%
!! TTATTTCCCATTATTTATTC+TGG - Chr4:84659770-84659789 MsG0480023395.01.T01:intron 20.0%
!! TTGACACATTTAAAAGTTAA+GGG - Chr4:84653146-84653165 MsG0480023395.01.T01:three_prime_UTR 20.0%
!! TTTATAACATATTCCAAATC+TGG - Chr4:84657233-84657252 MsG0480023395.01.T01:intron 20.0%
!!! AACTTTTAAATGTGTCAATT+TGG + Chr4:84653144-84653163 None:intergenic 20.0%
!!! AGAATTGATTTTATGATGTT+TGG + Chr4:84653339-84653358 None:intergenic 20.0%
!!! ATATCTTTTTTATGCATGAA+AGG - Chr4:84657043-84657062 MsG0480023395.01.T01:intron 20.0%
!!! ATTAGTTAATGTTTTCATCA+AGG + Chr4:84655873-84655892 None:intergenic 20.0%
!!! ATTTACTGCTAAAACAATTT+TGG + Chr4:84653221-84653240 None:intergenic 20.0%
!!! CGTTTTTTGAAAAAAGTTAA+CGG - Chr4:84653080-84653099 MsG0480023395.01.T01:three_prime_UTR 20.0%
!!! TATTAAAATATTGGTTGAGA+TGG + Chr4:84654615-84654634 None:intergenic 20.0%
!!! TGTTTTATTTTTCTGTTTCT+AGG - Chr4:84658478-84658497 MsG0480023395.01.T01:intron 20.0%
!!! TTGTTTTAGCAGTAAATTTA+AGG - Chr4:84653224-84653243 MsG0480023395.01.T01:CDS 20.0%
!!! TTTTCCTTGTTTTATAAACA+CGG - Chr4:84653856-84653875 MsG0480023395.01.T01:intron 20.0%
!!! TTTTGTCAACTTAATGAATA+AGG + Chr4:84653982-84654001 None:intergenic 20.0%
!!! TTTTTTTTACCATTAACTGT+TGG + Chr4:84657478-84657497 None:intergenic 20.0%
! AAAAAACGTTAACTTTGTAC+AGG + Chr4:84653068-84653087 None:intergenic 25.0%
! AAACAGCATGCTAAATATAT+AGG - Chr4:84659813-84659832 MsG0480023395.01.T01:intron 25.0%
! AAATATGATGTCAATACTTG+AGG - Chr4:84659891-84659910 MsG0480023395.01.T01:CDS 25.0%
! AAGGTGAAAATTGATTATAG+AGG + Chr4:84653366-84653385 None:intergenic 25.0%
! AAGGTTTATTACTAAAGGAA+GGG - Chr4:84656079-84656098 MsG0480023395.01.T01:intron 25.0%
! AGTCTGTAGTTAATTATTGT+GGG - Chr4:84655270-84655289 MsG0480023395.01.T01:intron 25.0%
! CATCAGTTACTAATAATGTT+GGG + Chr4:84656670-84656689 None:intergenic 25.0%
! CATTAGTAATCTTTCATTGT+TGG - Chr4:84656152-84656171 MsG0480023395.01.T01:intron 25.0%
! CCTCTTTCTTTATATTGAAA+CGG - Chr4:84657991-84658010 MsG0480023395.01.T01:CDS 25.0%
! CGTTTCAATATAAAGAAAGA+GGG + Chr4:84657993-84658012 None:intergenic 25.0%
! GAATTGTAATGACTAATGAA+TGG + Chr4:84655623-84655642 None:intergenic 25.0%
! GGATCAAATGTCAAAAATTA+GGG + Chr4:84652983-84653002 None:intergenic 25.0%
! GGTAAATGATATACAAATTG+GGG + Chr4:84659995-84660014 None:intergenic 25.0%
! GTAAATGATATACAAATTGG+GGG + Chr4:84659994-84660013 None:intergenic 25.0%
! GTAATCTAAATTTACTCTAC+AGG - Chr4:84654693-84654712 MsG0480023395.01.T01:intron 25.0%
! GTATTTATATAGCTTAACCA+AGG + Chr4:84657562-84657581 None:intergenic 25.0%
! GTGCATTTATTTAGATAGAT+TGG - Chr4:84656850-84656869 MsG0480023395.01.T01:intron 25.0%
! GTTTCAATATAAAGAAAGAG+GGG + Chr4:84657992-84658011 None:intergenic 25.0%
! TAAAATCACGAATAAAGACT+TGG + Chr4:84655355-84655374 None:intergenic 25.0%
! TAAATAAATCTAACAGCAGT+GGG + Chr4:84657948-84657967 None:intergenic 25.0%
! TACATGATGTAAATAAACAG+TGG + Chr4:84654451-84654470 None:intergenic 25.0%
! TACCACAAGAAAATACATAT+AGG + Chr4:84656195-84656214 None:intergenic 25.0%
! TCACCTAATTAAGATACAAA+TGG + Chr4:84654477-84654496 None:intergenic 25.0%
! TGAGAACTAGTTAACAAAAT+TGG + Chr4:84654663-84654682 None:intergenic 25.0%
! TGCTAACCAGAATAAATAAT+GGG + Chr4:84659779-84659798 None:intergenic 25.0%
! TTAAATAAATCTAACAGCAG+TGG + Chr4:84657949-84657968 None:intergenic 25.0%
! TTAATCCATTCAAATTCCTA+GGG + Chr4:84657093-84657112 None:intergenic 25.0%
! TTATTTAACATGTGATCTCA+GGG - Chr4:84656513-84656532 MsG0480023395.01.T01:CDS 25.0%
! TTGGTCATAATTCAAAACAT+TGG + Chr4:84655336-84655355 None:intergenic 25.0%
! TTTAATCCATTCAAATTCCT+AGG + Chr4:84657094-84657113 None:intergenic 25.0%
! TTTGAAAAAAGTTAACGGAA+AGG - Chr4:84653085-84653104 MsG0480023395.01.T01:three_prime_UTR 25.0%
!! AAACTACTAGTAGTATTTTG+TGG - Chr4:84654016-84654035 MsG0480023395.01.T01:CDS 25.0%
!! AACTCTTTTCATTAAAGGAA+GGG - Chr4:84656111-84656130 MsG0480023395.01.T01:intron 25.0%
!! CTTGCATCAACATAATTTTA+TGG + Chr4:84653926-84653945 None:intergenic 25.0%
!! TAACTCTTTTCATTAAAGGA+AGG - Chr4:84656110-84656129 MsG0480023395.01.T01:intron 25.0%
!! TGTTTGGTTTCAATTCTAAA+AGG + Chr4:84653385-84653404 None:intergenic 25.0%
!!! AGTAATAGTAATAGCTTGTT+TGG + Chr4:84653693-84653712 None:intergenic 25.0%
!!! ATTATTTTACTACGAGCATA+TGG - Chr4:84656545-84656564 MsG0480023395.01.T01:CDS 25.0%
!!! ATTTGAATGGATTAAAGATG+AGG - Chr4:84657098-84657117 MsG0480023395.01.T01:intron 25.0%
!!! CAATTCATTTGGTTCTTTTT+GGG - Chr4:84659735-84659754 MsG0480023395.01.T01:intron 25.0%
!!! CTAATGAAAAGTGTCATTTA+AGG + Chr4:84656138-84656157 None:intergenic 25.0%
!!! CTTATTTTTTCTTCTCACTT+CGG + Chr4:84653173-84653192 None:intergenic 25.0%
!!! CTTTTACTGTTTTGAAGTAA+AGG - Chr4:84657401-84657420 MsG0480023395.01.T01:intron 25.0%
!!! GTTATTAGCAGTGTTTTTTT+AGG + Chr4:84658279-84658298 None:intergenic 25.0%
!!! GTTTTAACTTCCTGTTAAAT+GGG - Chr4:84657607-84657626 MsG0480023395.01.T01:CDS 25.0%
!!! GTTTTGATTTACTACTTTTG+AGG - Chr4:84654059-84654078 MsG0480023395.01.T01:CDS 25.0%
!!! TGAAGGATTATTTTTACCTT+TGG - Chr4:84653491-84653510 MsG0480023395.01.T01:CDS 25.0%
!!! TGTTTTAACTTCCTGTTAAA+TGG - Chr4:84657606-84657625 MsG0480023395.01.T01:CDS 25.0%
!!! TTTCCTTGTTTTATAAACAC+GGG - Chr4:84653857-84653876 MsG0480023395.01.T01:intron 25.0%
!!! TTTTAACTTCCTGTTAAATG+GGG - Chr4:84657608-84657627 MsG0480023395.01.T01:CDS 25.0%
AAAAAGAACGAAATAGTAGG+AGG - Chr4:84653428-84653447 MsG0480023395.01.T01:CDS 30.0%
AAACATACTGATAACTGAAG+AGG - Chr4:84659615-84659634 MsG0480023395.01.T01:intron 30.0%
AAACATAGCTTTCACTTAGA+AGG + Chr4:84653602-84653621 None:intergenic 30.0%
AAATGAAGAAGAAGAATGGA+AGG - Chr4:84652895-84652914 MsG0480023395.01.T01:three_prime_UTR 30.0%
AACATATACAATTTCAGAGC+TGG - Chr4:84656250-84656269 MsG0480023395.01.T01:CDS 30.0%
AAGGTGAAATTACACAGATT+TGG + Chr4:84657447-84657466 None:intergenic 30.0%
AATTATTGTGGGAATCCTAT+TGG - Chr4:84655281-84655300 MsG0480023395.01.T01:intron 30.0%
AATTCAAACATGCAATGCTT+AGG + Chr4:84659342-84659361 None:intergenic 30.0%
ACAGATTATGATAAGAGCTA+AGG + Chr4:84659258-84659277 None:intergenic 30.0%
ACATATACAATTTCAGAGCT+GGG - Chr4:84656251-84656270 MsG0480023395.01.T01:CDS 30.0%
ACCAAACAAATGCATAATAG+TGG - Chr4:84653397-84653416 MsG0480023395.01.T01:CDS 30.0%
AGGACAAGGTTTATTACTAA+AGG - Chr4:84656074-84656093 MsG0480023395.01.T01:intron 30.0%
AGGTGAAATTACACAGATTT+GGG + Chr4:84657446-84657465 None:intergenic 30.0%
AGGTTTATTACTAAAGGAAG+GGG - Chr4:84656080-84656099 MsG0480023395.01.T01:intron 30.0%
AGTTTCCTAGTGAAAAAAAC+CGG + Chr4:84658805-84658824 None:intergenic 30.0%
ATCACTGTCAGCAATATAAA+AGG + Chr4:84653006-84653025 None:intergenic 30.0%
ATCAGTATGTTTGCTTTACT+TGG + Chr4:84659607-84659626 None:intergenic 30.0%
ATCGAAGATTCATACAATGT+AGG + Chr4:84659713-84659732 None:intergenic 30.0%
ATCTAAATTTACTCTACAGG+AGG - Chr4:84654696-84654715 MsG0480023395.01.T01:intron 30.0%
ATCTTCGATTGCAATTCATT+TGG - Chr4:84659724-84659743 MsG0480023395.01.T01:intron 30.0%
ATTCCGGTAAAATAACTGAT+AGG - Chr4:84656427-84656446 MsG0480023395.01.T01:intron 30.0%
CAAGGTTTATTACTAAAGGA+AGG - Chr4:84656078-84656097 MsG0480023395.01.T01:intron 30.0%
CCAAACAAATGCATAATAGT+GGG - Chr4:84653398-84653417 MsG0480023395.01.T01:CDS 30.0%
CCAACATTATTAGTAACTGA+TGG - Chr4:84656668-84656687 MsG0480023395.01.T01:intron 30.0%
CCATCAGTTACTAATAATGT+TGG + Chr4:84656671-84656690 None:intergenic 30.0%
CCGTTTCAATATAAAGAAAG+AGG + Chr4:84657994-84658013 None:intergenic 30.0%
CTAAAATCTACCATACTGAT+GGG + Chr4:84657260-84657279 None:intergenic 30.0%
CTAGTCACTACTAAGAATAA+AGG + Chr4:84656967-84656986 None:intergenic 30.0%
CTGCTAACCAGAATAAATAA+TGG + Chr4:84659780-84659799 None:intergenic 30.0%
CTTATTTAACATGTGATCTC+AGG - Chr4:84656512-84656531 MsG0480023395.01.T01:CDS 30.0%
CTTTATTCTTAGTAGTGACT+AGG - Chr4:84656965-84656984 MsG0480023395.01.T01:intron 30.0%
CTTTCATTGTCTTCTTATCT+TGG + Chr4:84654172-84654191 None:intergenic 30.0%
GAAATAGAGATGATTAAACG+AGG - Chr4:84653897-84653916 MsG0480023395.01.T01:intron 30.0%
GACAACAAAAAAACTCAAGA+GGG + Chr4:84655692-84655711 None:intergenic 30.0%
GAGATAAATGTAATTGGTGA+AGG - Chr4:84653474-84653493 MsG0480023395.01.T01:CDS 30.0%
GAGTCTGTAGTTAATTATTG+TGG - Chr4:84655269-84655288 MsG0480023395.01.T01:intron 30.0%
GCATGCTAAATATATAGGTT+TGG - Chr4:84659818-84659837 MsG0480023395.01.T01:intron 30.0%
GGGATCAAATGTCAAAAATT+AGG + Chr4:84652984-84653003 None:intergenic 30.0%
TAAAATCTACCATACTGATG+GGG + Chr4:84657259-84657278 None:intergenic 30.0%
TAACAGAAAAACATAAGCAG+AGG + Chr4:84659014-84659033 None:intergenic 30.0%
TAAGGTTAGACAAGAAACTT+TGG - Chr4:84656804-84656823 MsG0480023395.01.T01:intron 30.0%
TATATTGAAACGGCACATTT+AGG - Chr4:84658001-84658020 MsG0480023395.01.T01:CDS 30.0%
TATTAAAAACCTATGCCTTG+AGG + Chr4:84654883-84654902 None:intergenic 30.0%
TATTACTGATAGCATGTTCT+TGG - Chr4:84655472-84655491 MsG0480023395.01.T01:intron 30.0%
TCACTGTCAGCAATATAAAA+GGG + Chr4:84653005-84653024 None:intergenic 30.0%
TCAGTATGTTTGCTTTACTT+GGG + Chr4:84659606-84659625 None:intergenic 30.0%
TCTAAGTGAAAGCTATGTTT+CGG - Chr4:84653602-84653621 MsG0480023395.01.T01:intron 30.0%
TGATGTTGAAAAATCTAGTC+TGG - Chr4:84655079-84655098 MsG0480023395.01.T01:intron 30.0%
TGTCATCCAATGTTACAAAT+GGG - Chr4:84655177-84655196 MsG0480023395.01.T01:intron 30.0%
TTAACTGTTGGAACTTACAA+AGG + Chr4:84657466-84657485 None:intergenic 30.0%
TTAGTAATAAACCTTGTCCT+GGG + Chr4:84656074-84656093 None:intergenic 30.0%
TTCAAAACAGTAAAAGCCAT+GGG + Chr4:84657397-84657416 None:intergenic 30.0%
TTCAAAACATTGGTACTGTT+TGG + Chr4:84655326-84655345 None:intergenic 30.0%
TTGTAAGTTCCAACAGTTAA+TGG - Chr4:84657466-84657485 MsG0480023395.01.T01:intron 30.0%
TTGTAGTTTCAACAATTCAG+TGG + Chr4:84657317-84657336 None:intergenic 30.0%
TTGTCATCCAATGTTACAAA+TGG - Chr4:84655176-84655195 MsG0480023395.01.T01:intron 30.0%
TTTAGTAATAAACCTTGTCC+TGG + Chr4:84656075-84656094 None:intergenic 30.0%
TTTCATTGTTGGTACTTCTT+TGG - Chr4:84656163-84656182 MsG0480023395.01.T01:intron 30.0%
! AATTGTACCAAGATTTTTCG+TGG + Chr4:84655207-84655226 None:intergenic 30.0%
! AATTTTCCTATGCTAGATTG+AGG - Chr4:84656927-84656946 MsG0480023395.01.T01:intron 30.0%
! ACTCTTTTCATTAAAGGAAG+GGG - Chr4:84656112-84656131 MsG0480023395.01.T01:intron 30.0%
! ATTCGTGATTTTATTCCATC+TGG - Chr4:84655362-84655381 MsG0480023395.01.T01:intron 30.0%
! CTCTTTTCTTTTCCAATTCT+AGG + Chr4:84654148-84654167 None:intergenic 30.0%
! CTTTTCGTGTCATAATATTC+TGG + Chr4:84659499-84659518 None:intergenic 30.0%
! GACCTATATGTATTTTCTTG+TGG - Chr4:84656190-84656209 MsG0480023395.01.T01:intron 30.0%
! GCATCAACATAATTTTATGG+TGG + Chr4:84653923-84653942 None:intergenic 30.0%
! GGAATTAAGAAAGTTGATTG+TGG + Chr4:84655957-84655976 None:intergenic 30.0%
! GTTCCTTTTTCTTGTCAAAA+TGG + Chr4:84656906-84656925 None:intergenic 30.0%
! TCTAAAATCTACCATACTGA+TGG + Chr4:84657261-84657280 None:intergenic 30.0%
! TTTAAAACCACCATGTCTTT+AGG - Chr4:84654747-84654766 MsG0480023395.01.T01:intron 30.0%
!! GATCCTATCAGTTATTTTAC+CGG + Chr4:84656433-84656452 None:intergenic 30.0%
!!! ACGAATCATGTTTTAACCAA+AGG + Chr4:84653510-84653529 None:intergenic 30.0%
!!! CAAGTAAAGAGTGTTTTGAA+TGG + Chr4:84654373-84654392 None:intergenic 30.0%
!!! GACATGGTGGTTTTAAAATA+AGG + Chr4:84654744-84654763 None:intergenic 30.0%
!!! GCAATTCATTTGGTTCTTTT+TGG - Chr4:84659734-84659753 MsG0480023395.01.T01:intron 30.0%
!!! TTAATTTTTTTTGCAGGCCT+TGG - Chr4:84659059-84659078 MsG0480023395.01.T01:intron 30.0%
!!! TTGTTTCTGTTCTTGTTTTG+TGG + Chr4:84657839-84657858 None:intergenic 30.0%
!!! TTTTGGCTTAATATATCCAG+AGG + Chr4:84653204-84653223 None:intergenic 30.0%
!!! TTTTTTCACTAGGAAACTTG+TGG - Chr4:84658807-84658826 MsG0480023395.01.T01:intron 30.0%
AAAATAAGTTAAGGGACCTC+TGG - Chr4:84653185-84653204 MsG0480023395.01.T01:three_prime_UTR 35.0%
AAACGTTAACTTTGTACAGG+TGG + Chr4:84653065-84653084 None:intergenic 35.0%
AAATCCTTTCATAGCTTAGC+TGG - Chr4:84659308-84659327 MsG0480023395.01.T01:intron 35.0%
AACAAAGGAGGCTACTTAAT+TGG - Chr4:84658752-84658771 MsG0480023395.01.T01:intron 35.0%
AAGAATATGGTCGATAGCTA+AGG + Chr4:84653814-84653833 None:intergenic 35.0%
AATTCCCGTGATTTACTCAA+CGG - Chr4:84655971-84655990 MsG0480023395.01.T01:intron 35.0%
AATTTACCGTTACAAGACAG+AGG - Chr4:84658652-84658671 MsG0480023395.01.T01:intron 35.0%
ACATATTTCCATTGCCAAGA+AGG + Chr4:84658072-84658091 None:intergenic 35.0%
ACATTATCAAAAGCTTCCCA+TGG - Chr4:84657378-84657397 MsG0480023395.01.T01:intron 35.0%
ACGAAAAGATCTCGATTCAT+TGG - Chr4:84659511-84659530 MsG0480023395.01.T01:intron 35.0%
ACTGGTAAATGGAAATCGAT+GGG + Chr4:84654940-84654959 None:intergenic 35.0%
AGATAGAACCATTCAGGATT+TGG + Chr4:84658254-84658273 None:intergenic 35.0%
AGCTGCAAAAACACAGAATT+TGG + Chr4:84658177-84658196 None:intergenic 35.0%
ATAAGACCTATAGTCATCCA+TGG - Chr4:84654976-84654995 MsG0480023395.01.T01:intron 35.0%
ATATATCAGTGACAAAGCTG+TGG - Chr4:84658206-84658225 MsG0480023395.01.T01:CDS 35.0%
ATCACACTGTAAAATCGTGT+AGG - Chr4:84657632-84657651 MsG0480023395.01.T01:CDS 35.0%
ATGGATCAGCTGATCTTATA+CGG - Chr4:84658552-84658571 MsG0480023395.01.T01:intron 35.0%
ATGTGCCTCTGTCTAAATAT+AGG - Chr4:84655665-84655684 MsG0480023395.01.T01:intron 35.0%
ATTAAGTAGCCTCCTTTGTT+CGG + Chr4:84658752-84658771 None:intergenic 35.0%
CAAAAGAGCAGTAGATACAA+AGG - Chr4:84657778-84657797 MsG0480023395.01.T01:CDS 35.0%
CACATCTCTTGACATAGATT+TGG - Chr4:84657344-84657363 MsG0480023395.01.T01:intron 35.0%
CACTGTCAGCAATATAAAAG+GGG + Chr4:84653004-84653023 None:intergenic 35.0%
CCCACTATTATGCATTTGTT+TGG + Chr4:84653401-84653420 None:intergenic 35.0%
CTCTTGACATAGATTTGGAT+TGG - Chr4:84657349-84657368 MsG0480023395.01.T01:intron 35.0%
CTTCAAAACAGTAAAAGCCA+TGG + Chr4:84657398-84657417 None:intergenic 35.0%
CTTGAGGATTAAGTAGCATA+CGG - Chr4:84659907-84659926 MsG0480023395.01.T01:intron 35.0%
GAAAGGACCAACTAAGTAAA+CGG - Chr4:84653102-84653121 MsG0480023395.01.T01:three_prime_UTR 35.0%
GAAATAGATTGTATTGCCGT+TGG - Chr4:84657171-84657190 MsG0480023395.01.T01:intron 35.0%
GCACATAGAGTTAGATTAGT+GGG + Chr4:84655651-84655670 None:intergenic 35.0%
GCATGCTAATGAATAAAGAC+AGG + Chr4:84656762-84656781 None:intergenic 35.0%
GCTGCAAAAACACAGAATTT+GGG + Chr4:84658176-84658195 None:intergenic 35.0%
GGACAACAAAAAAACTCAAG+AGG + Chr4:84655693-84655712 None:intergenic 35.0%
GGCAAAAAGAACGAAATAGT+AGG - Chr4:84653425-84653444 MsG0480023395.01.T01:CDS 35.0%
GGTGAAATTACACAGATTTG+GGG + Chr4:84657445-84657464 None:intergenic 35.0%
GTATGAAGAAAAGATCCTCA+AGG - Chr4:84654865-84654884 MsG0480023395.01.T01:intron 35.0%
GTTTGAAGATGTTCAACTGT+TGG - Chr4:84655136-84655155 MsG0480023395.01.T01:intron 35.0%
TAGGTAAGATAGAACCATTC+AGG + Chr4:84658260-84658279 None:intergenic 35.0%
TATCATACTCTCCCTTCAAT+AGG + Chr4:84655397-84655416 None:intergenic 35.0%
TATGAATAGAATAGTGTCCC+AGG - Chr4:84656054-84656073 MsG0480023395.01.T01:intron 35.0%
TATTGGAACTATTGCTGCAA+AGG - Chr4:84655298-84655317 MsG0480023395.01.T01:intron 35.0%
TCAACGCTACTGATATTATC+AGG - Chr4:84655750-84655769 MsG0480023395.01.T01:intron 35.0%
TCTCCCGTGTTTATAAAACA+AGG + Chr4:84653863-84653882 None:intergenic 35.0%
TGCCATATTGGATCTTATTG+AGG - Chr4:84658868-84658887 MsG0480023395.01.T01:intron 35.0%
TTAGGTGACGTAGTATGTTA+TGG - Chr4:84654489-84654508 MsG0480023395.01.T01:intron 35.0%
TTATGCCCTAGGAATTTGAA+TGG - Chr4:84657085-84657104 MsG0480023395.01.T01:intron 35.0%
TTCAAATTCCTAGGGCATAA+AGG + Chr4:84657085-84657104 None:intergenic 35.0%
TTGATTAATGCCAACCCAAA+AGG - Chr4:84659658-84659677 MsG0480023395.01.T01:intron 35.0%
TTTGCAGCAATAGTTCCAAT+AGG + Chr4:84655299-84655318 None:intergenic 35.0%
! AACAAATGCATAATAGTGGG+AGG - Chr4:84653401-84653420 MsG0480023395.01.T01:CDS 35.0%
! AATTAGCCTCAACTCTATTG+AGG - Chr4:84655223-84655242 MsG0480023395.01.T01:intron 35.0%
! CATACAATTTGTTCGCAACT+GGG + Chr4:84654850-84654869 None:intergenic 35.0%
! GGGTGTGTTTGTGTTTATTT+TGG + Chr4:84657923-84657942 None:intergenic 35.0%
! GTTAACTAGTTCTCACTCAT+TGG - Chr4:84654668-84654687 MsG0480023395.01.T01:intron 35.0%
! GTTACAAATTTTCTGCCTCT+GGG - Chr4:84652867-84652886 MsG0480023395.01.T01:three_prime_UTR 35.0%
! TCATACAATTTGTTCGCAAC+TGG + Chr4:84654851-84654870 None:intergenic 35.0%
! TCTACAGGAGGCAAAATTTT+AGG - Chr4:84654708-84654727 MsG0480023395.01.T01:intron 35.0%
! TTACCACAAGTCTTATCCAA+CGG + Chr4:84657190-84657209 None:intergenic 35.0%
! TTGTAACTTGTAAGCATCTC+AGG + Chr4:84658400-84658419 None:intergenic 35.0%
!! AAAACACAGAATTTGGGTTG+CGG + Chr4:84658170-84658189 None:intergenic 35.0%
!! AGGCAAAATTTTAGGTGGTA+GGG - Chr4:84654716-84654735 MsG0480023395.01.T01:intron 35.0%
!! GAATGGATTAAAGATGAGGT+GGG - Chr4:84657102-84657121 MsG0480023395.01.T01:intron 35.0%
!! GACATAGATTTGGATTGGTA+TGG - Chr4:84657354-84657373 MsG0480023395.01.T01:intron 35.0%
!! GCACCATTTTGACAAGAAAA+AGG - Chr4:84656900-84656919 MsG0480023395.01.T01:intron 35.0%
!! GGTTTGTTACAATGACAGTT+TGG - Chr4:84659123-84659142 MsG0480023395.01.T01:intron 35.0%
!! GTTATTTTACCGGAATCAAC+AGG + Chr4:84656423-84656442 None:intergenic 35.0%
!! TGAATGGATTAAAGATGAGG+TGG - Chr4:84657101-84657120 MsG0480023395.01.T01:intron 35.0%
!!! ATTTACTACTTTTGAGGCTC+AGG - Chr4:84654065-84654084 MsG0480023395.01.T01:CDS 35.0%
!!! GATTTCCGGTTTTTTTCACT+AGG - Chr4:84658797-84658816 MsG0480023395.01.T01:intron 35.0%
!!! TTTGATGCCTGCTAGTTTTA+AGG - Chr4:84656308-84656327 MsG0480023395.01.T01:CDS 35.0%
AAGAACGAAATAGTAGGAGG+TGG - Chr4:84653431-84653450 MsG0480023395.01.T01:CDS 40.0%
AAGAAGAGAGAAGGAGCAAT+GGG - Chr4:84652946-84652965 MsG0480023395.01.T01:three_prime_UTR 40.0%
AAGAGCAAAACCAACGCAAA+AGG - Chr4:84657871-84657890 MsG0480023395.01.T01:CDS 40.0%
ACCAACTAAGTAAACGGAAG+AGG - Chr4:84653108-84653127 MsG0480023395.01.T01:three_prime_UTR 40.0%
ACTGGACAGAACCTGAAAAA+CGG + Chr4:84654784-84654803 None:intergenic 40.0%
ACTGTTGGAACAGGAAAAAG+AGG - Chr4:84655151-84655170 MsG0480023395.01.T01:intron 40.0%
AGAAAAGATCCTCAAGGCAT+AGG - Chr4:84654871-84654890 MsG0480023395.01.T01:intron 40.0%
AGAAGAAGAATGGAAGGTTG+TGG - Chr4:84652901-84652920 MsG0480023395.01.T01:three_prime_UTR 40.0%
AGATGTTCAACTGTTGGAAC+AGG - Chr4:84655142-84655161 MsG0480023395.01.T01:intron 40.0%
AGCATATGGAAAATGCTCTG+GGG - Chr4:84656559-84656578 MsG0480023395.01.T01:CDS 40.0%
AGGATAGCCACTTGAAATCT+TGG - Chr4:84660044-84660063 MsG0480023395.01.T01:CDS 40.0%
AGGGCATAAAGGTTAATGTG+AGG + Chr4:84657074-84657093 None:intergenic 40.0%
AGGGTCCTATATTTAGACAG+AGG + Chr4:84655673-84655692 None:intergenic 40.0%
AGTACTCCTCTGTCTTGTAA+CGG + Chr4:84658661-84658680 None:intergenic 40.0%
AGTGTGATTCCCCATTTAAC+AGG + Chr4:84657620-84657639 None:intergenic 40.0%
ATAACTTCAGGAGACGGTAA+TGG - Chr4:84655041-84655060 MsG0480023395.01.T01:intron 40.0%
ATACAAAGGAGAGCCTCAAA+AGG - Chr4:84657792-84657811 MsG0480023395.01.T01:CDS 40.0%
ATAGTCACAGAAACTGACAC+TGG + Chr4:84654958-84654977 None:intergenic 40.0%
ATATAAAGAAAGAGGGGACG+TGG + Chr4:84657986-84658005 None:intergenic 40.0%
ATCGTGTAGGTGTGAATGAT+TGG - Chr4:84657645-84657664 MsG0480023395.01.T01:CDS 40.0%
ATGGCGGTTACAGAAAAAGA+TGG + Chr4:84660016-84660035 None:intergenic 40.0%
ATTCCCGTGATTTACTCAAC+GGG - Chr4:84655972-84655991 MsG0480023395.01.T01:intron 40.0%
CAAAAGGCTGAAAATGTGAG+CGG - Chr4:84655017-84655036 MsG0480023395.01.T01:intron 40.0%
CACATTAACCTTTATGCCCT+AGG - Chr4:84657074-84657093 MsG0480023395.01.T01:intron 40.0%
CACTGGTAAATGGAAATCGA+TGG + Chr4:84654941-84654960 None:intergenic 40.0%
CAGAAACTGACACTGGTAAA+TGG + Chr4:84654951-84654970 None:intergenic 40.0%
CAGAGAATCCAAATCCTGAA+TGG - Chr4:84658243-84658262 MsG0480023395.01.T01:intron 40.0%
CATTTACATGTCTGCAACCA+TGG + Chr4:84654996-84655015 None:intergenic 40.0%
CCAGACATCAAAAACACAGT+GGG + Chr4:84652818-84652837 None:intergenic 40.0%
CGCGAAATGAAGAAGAAGAA+TGG - Chr4:84652891-84652910 MsG0480023395.01.T01:three_prime_UTR 40.0%
CTACATGACAGTATCGTGTT+CGG - Chr4:84654539-84654558 MsG0480023395.01.T01:intron 40.0%
CTGGTAAATGGAAATCGATG+GGG + Chr4:84654939-84654958 None:intergenic 40.0%
CTTCTTCCTCAATAGAGTTG+AGG + Chr4:84655232-84655251 None:intergenic 40.0%
GAAACCAGCTAAGCTATGAA+AGG + Chr4:84659315-84659334 None:intergenic 40.0%
GACGTATATCAAGAGACAAG+TGG - Chr4:84659473-84659492 MsG0480023395.01.T01:intron 40.0%
GAGCATATGGAAAATGCTCT+GGG - Chr4:84656558-84656577 MsG0480023395.01.T01:CDS 40.0%
GCAGACATGTAAATGCCAAA+AGG - Chr4:84655001-84655020 MsG0480023395.01.T01:intron 40.0%
GCTATCCTTGAATTCTATGG+CGG + Chr4:84660032-84660051 None:intergenic 40.0%
GGAACAATCACATGCCATAT+TGG - Chr4:84658856-84658875 MsG0480023395.01.T01:intron 40.0%
GGAATAGCAAGACATATACG+AGG + Chr4:84657529-84657548 None:intergenic 40.0%
GGCACATAGAGTTAGATTAG+TGG + Chr4:84655652-84655671 None:intergenic 40.0%
GGCCTCAATAAGATCCAATA+TGG + Chr4:84658873-84658892 None:intergenic 40.0%
GGTTGAGATGGTAACTAGAT+AGG + Chr4:84654603-84654622 None:intergenic 40.0%
GTAAACACCTGAATCTCCAA+AGG + Chr4:84656734-84656753 None:intergenic 40.0%
GTCCTCAAAATGATGAAGAG+AGG + Chr4:84658095-84658114 None:intergenic 40.0%
GTGGCTATCCTTGAATTCTA+TGG + Chr4:84660035-84660054 None:intergenic 40.0%
GTTCTTGCATGATAGATCGA+AGG - Chr4:84656690-84656709 MsG0480023395.01.T01:intron 40.0%
GTTTCAGACATGGTCAATTG+CGG - Chr4:84659549-84659568 MsG0480023395.01.T01:intron 40.0%
TAACTTACAACCAGCTCACA+TGG - Chr4:84658775-84658794 MsG0480023395.01.T01:intron 40.0%
TAGATGCAGTACGTGTTCTT+AGG + Chr4:84658986-84659005 None:intergenic 40.0%
TAGCAAGACATATACGAGGA+AGG + Chr4:84657525-84657544 None:intergenic 40.0%
TAGGTGTGAATGATTGGGTT+TGG - Chr4:84657651-84657670 MsG0480023395.01.T01:CDS 40.0%
TCCTCTTCCGTTTACTTAGT+TGG + Chr4:84653112-84653131 None:intergenic 40.0%
TCGTGTAGGTGTGAATGATT+GGG - Chr4:84657646-84657665 MsG0480023395.01.T01:CDS 40.0%
TCTTATTGAGGCCAAATGGT+CGG - Chr4:84658880-84658899 MsG0480023395.01.T01:intron 40.0%
TGCATGATAGATCGAAGGAT+GGG - Chr4:84656695-84656714 MsG0480023395.01.T01:intron 40.0%
TGGATCAGCTGATCTTATAC+GGG - Chr4:84658553-84658572 MsG0480023395.01.T01:intron 40.0%
TGGATCTTATTGAGGCCAAA+TGG - Chr4:84658876-84658895 MsG0480023395.01.T01:intron 40.0%
TGGTCGATAGCTAAGGAATA+AGG + Chr4:84653807-84653826 None:intergenic 40.0%
TGTAACCGCCATAGAATTCA+AGG - Chr4:84660024-84660043 MsG0480023395.01.T01:CDS 40.0%
TTGCATGATAGATCGAAGGA+TGG - Chr4:84656694-84656713 MsG0480023395.01.T01:intron 40.0%
TTTCAGACATGGTCAATTGC+GGG - Chr4:84659550-84659569 MsG0480023395.01.T01:intron 40.0%
! AAATGCATAATAGTGGGAGG+TGG - Chr4:84653404-84653423 MsG0480023395.01.T01:CDS 40.0%
! ACAGCTTTTGCAGCAATATG+TGG + Chr4:84659439-84659458 None:intergenic 40.0%
! ACAGGAGGCAAAATTTTAGG+TGG - Chr4:84654711-84654730 MsG0480023395.01.T01:intron 40.0%
! AGTCTCAGTTGTTTCAGACA+TGG - Chr4:84659539-84659558 MsG0480023395.01.T01:intron 40.0%
! CATTTTTCACGGTCATTGCT+TGG - Chr4:84653632-84653651 MsG0480023395.01.T01:intron 40.0%
! GGTTACAAATTTTCTGCCTC+TGG - Chr4:84652866-84652885 MsG0480023395.01.T01:three_prime_UTR 40.0%
! GTCCTCTCTTCATCATTTTG+AGG - Chr4:84658090-84658109 MsG0480023395.01.T01:CDS 40.0%
! TTGAAGCTTTGTCTTGCTGA+TGG - Chr4:84656632-84656651 MsG0480023395.01.T01:CDS 40.0%
!! AACTGGGAAGTGTTGACAAA+AGG + Chr4:84654834-84654853 None:intergenic 40.0%
!! ACAATGGATTGTCATAGTCC+AGG - Chr4:84656279-84656298 MsG0480023395.01.T01:CDS 40.0%
!! ATTTGTTATCCGGCTCTTGA+AGG - Chr4:84658929-84658948 MsG0480023395.01.T01:intron 40.0%
!! CTCAGATTCTCACTGCTTTT+CGG - Chr4:84654319-84654338 MsG0480023395.01.T01:CDS 40.0%
!! GAGGCAAAATTTTAGGTGGT+AGG - Chr4:84654715-84654734 MsG0480023395.01.T01:intron 40.0%
!! GCCACTCAAGATTTGTTATC+CGG - Chr4:84658919-84658938 MsG0480023395.01.T01:intron 40.0%
!! TAGCTTGTTTGGTTTGACGA+CGG + Chr4:84653682-84653701 None:intergenic 40.0%
!! TCGGAGCTTCTCATTTTTCA+CGG - Chr4:84653621-84653640 MsG0480023395.01.T01:intron 40.0%
!! TCTGTCTTGGAGTTGGTATT+AGG - Chr4:84656989-84657008 MsG0480023395.01.T01:intron 40.0%
!! TTATACGGGCACTGAACAAT+CGG - Chr4:84658567-84658586 MsG0480023395.01.T01:intron 40.0%
!! TTTGGAAGCACCTAAAGACA+TGG + Chr4:84654760-84654779 None:intergenic 40.0%
!!! CGTTGGTTTTGCTCTTTGAT+AGG + Chr4:84657867-84657886 None:intergenic 40.0%
!!! TGCCTGCTAGTTTTAAGGTT+CGG - Chr4:84656313-84656332 MsG0480023395.01.T01:CDS 40.0%
AAAAGGACTCTAGCCAACCA+AGG - Chr4:84657809-84657828 MsG0480023395.01.T01:CDS 45.0%
AAACCAACGCAAAAGGCAAC+AGG - Chr4:84657878-84657897 MsG0480023395.01.T01:CDS 45.0%
AACCAACGCAAAAGGCAACA+GGG - Chr4:84657879-84657898 MsG0480023395.01.T01:CDS 45.0%
AACCAAGGAGAAATCTGGTC+TGG + Chr4:84658716-84658735 None:intergenic 45.0%
AACCAGCTCACATGGATTTC+CGG - Chr4:84658783-84658802 MsG0480023395.01.T01:intron 45.0%
AACGAAATAGTAGGAGGTGG+CGG - Chr4:84653434-84653453 MsG0480023395.01.T01:CDS 45.0%
AATAGGAAAGCGACTCCAGA+TGG + Chr4:84655380-84655399 None:intergenic 45.0%
AATGTGAGCGGCATAACTTC+AGG - Chr4:84655029-84655048 MsG0480023395.01.T01:intron 45.0%
ACCAAGGAGAAATCTGGTCT+GGG + Chr4:84658715-84658734 None:intergenic 45.0%
ACTCTATTGAGGAAGAAGCG+TGG - Chr4:84655234-84655253 MsG0480023395.01.T01:intron 45.0%
AGAATGGAAGGTTGTGGCTA+TGG - Chr4:84652907-84652926 MsG0480023395.01.T01:three_prime_UTR 45.0%
AGCTTTCGTTGAGATGGTAG+TGG + Chr4:84658124-84658143 None:intergenic 45.0%
CAAGACATATACGAGGAAGG+TGG + Chr4:84657522-84657541 None:intergenic 45.0%
CAAGCGTCCAAGATTTCAAG+TGG + Chr4:84660054-84660073 None:intergenic 45.0%
CAGAACCTGAAAAACGGCTT+TGG + Chr4:84654778-84654797 None:intergenic 45.0%
CCACTAACCAAGGAGAAATC+TGG + Chr4:84658721-84658740 None:intergenic 45.0%
CCAGATTTCTCCTTGGTTAG+TGG - Chr4:84658718-84658737 MsG0480023395.01.T01:intron 45.0%
CCTCCATTATGGTAAGACCA+AGG + Chr4:84659079-84659098 None:intergenic 45.0%
CGAGCATATGGAAAATGCTC+TGG - Chr4:84656557-84656576 MsG0480023395.01.T01:CDS 45.0%
CGATACTGTCATGTAGTCAC+CGG + Chr4:84654535-84654554 None:intergenic 45.0%
CTATTCCTTCTCAACTGCCT+TGG - Chr4:84657542-84657561 MsG0480023395.01.T01:CDS 45.0%
CTGCAACCATGGATGACTAT+AGG + Chr4:84654985-84655004 None:intergenic 45.0%
CTTAACCAAGGCAGTTGAGA+AGG + Chr4:84657550-84657569 None:intergenic 45.0%
GAAGAAGAGAGAAGGAGCAA+TGG - Chr4:84652945-84652964 MsG0480023395.01.T01:three_prime_UTR 45.0%
GACAAAAGGCTCAGTATACG+CGG + Chr4:84654820-84654839 None:intergenic 45.0%
GATTGTCATAGTCCAGGACA+AGG - Chr4:84656285-84656304 MsG0480023395.01.T01:CDS 45.0%
GCATGCTTCAAAGCCAGTTA+AGG - Chr4:84654913-84654932 MsG0480023395.01.T01:intron 45.0%
GCCAGACATCAAAAACACAG+TGG + Chr4:84652819-84652838 None:intergenic 45.0%
GCCGGATAACAAATCTTGAG+TGG + Chr4:84658923-84658942 None:intergenic 45.0%
GCTGTTCCTCAATCTAGCAT+AGG + Chr4:84656936-84656955 None:intergenic 45.0%
GCTTTCGTTGAGATGGTAGT+GGG + Chr4:84658123-84658142 None:intergenic 45.0%
GGCAGTCCCATTTGTAACAT+TGG + Chr4:84655186-84655205 None:intergenic 45.0%
GTAAACGGAAGAGGACTTAC+AGG - Chr4:84653117-84653136 MsG0480023395.01.T01:three_prime_UTR 45.0%
GTCCGAACCTTAAAACTAGC+AGG + Chr4:84656318-84656337 None:intergenic 45.0%
GTGGTCTGTTGTCAGTAGTA+TGG - Chr4:84658826-84658845 MsG0480023395.01.T01:intron 45.0%
TAAATCTAACAGCAGTGGGC+TGG + Chr4:84657944-84657963 None:intergenic 45.0%
TAGAATAGTGTCCCAGGACA+AGG - Chr4:84656060-84656079 MsG0480023395.01.T01:intron 45.0%
TCAGAGCTGGGAGAAAACAA+TGG - Chr4:84656263-84656282 MsG0480023395.01.T01:CDS 45.0%
TCTTCATACACTTCAGCTGC+AGG - Chr4:84655433-84655452 MsG0480023395.01.T01:intron 45.0%
TGATGACTCTGCAACAGAAG+AGG - Chr4:84656353-84656372 MsG0480023395.01.T01:CDS 45.0%
TTCCCGTGATTTACTCAACG+GGG - Chr4:84655973-84655992 MsG0480023395.01.T01:intron 45.0%
TTGCCATGTCCTCAAGTGAT+TGG - Chr4:84653026-84653045 MsG0480023395.01.T01:three_prime_UTR 45.0%
TTGCCGTTGGATAAGACTTG+TGG - Chr4:84657184-84657203 MsG0480023395.01.T01:intron 45.0%
TTGTGGCTATGGTGAGATCA+CGG - Chr4:84652918-84652937 MsG0480023395.01.T01:three_prime_UTR 45.0%
TTTCTCCTTGGTTAGTGGAG+TGG - Chr4:84658723-84658742 MsG0480023395.01.T01:intron 45.0%
! AAATCTAACAGCAGTGGGCT+GGG + Chr4:84657943-84657962 None:intergenic 45.0%
! ACGAGGAAGGTGGAAAGTTT+TGG + Chr4:84657512-84657531 None:intergenic 45.0%
! CGCTCACATTTTCAGCCTTT+TGG + Chr4:84655019-84655038 None:intergenic 45.0%
! CTCTATTGAGGAAGAAGCGT+GGG - Chr4:84655235-84655254 MsG0480023395.01.T01:intron 45.0%
! CTCTGCAACAGAAGAGGTTT+TGG - Chr4:84656359-84656378 MsG0480023395.01.T01:CDS 45.0%
! CTCTGGGGATTTATCTGTTC+AGG - Chr4:84656574-84656593 MsG0480023395.01.T01:CDS 45.0%
! GGAGTCGCTTTCCTATTGAA+GGG - Chr4:84655383-84655402 MsG0480023395.01.T01:intron 45.0%
! TGGAGTCGCTTTCCTATTGA+AGG - Chr4:84655382-84655401 MsG0480023395.01.T01:intron 45.0%
! TTTGGATCCTGACTTTGGAG+AGG - Chr4:84656377-84656396 MsG0480023395.01.T01:CDS 45.0%
!! AGGCCTTGGTCTTACCATAA+TGG - Chr4:84659073-84659092 MsG0480023395.01.T01:intron 45.0%
!! CCCACTGTGTTTTTGATGTC+TGG - Chr4:84652815-84652834 MsG0480023395.01.T01:three_prime_UTR 45.0%
!! CCTTGGTCTTACCATAATGG+AGG - Chr4:84659076-84659095 MsG0480023395.01.T01:intron 45.0%
!! GAGAGAGTTGATGTGCAAAC+AGG - Chr4:84656596-84656615 MsG0480023395.01.T01:CDS 45.0%
!! TCACTGCTTTTCGGCTCAAA+AGG - Chr4:84654328-84654347 MsG0480023395.01.T01:CDS 45.0%
!! TTGGGGACTTTGAGACATCA+GGG + Chr4:84657428-84657447 None:intergenic 45.0%
!! TTTGGGGACTTTGAGACATC+AGG + Chr4:84657429-84657448 None:intergenic 45.0%
!!! AGCTTTTTCAGCCTCCTCAT+AGG + Chr4:84656001-84656020 None:intergenic 45.0%
!!! GAGGTTTTGGATCCTGACTT+TGG - Chr4:84656372-84656391 MsG0480023395.01.T01:CDS 45.0%
!!! GCTTTTTCAGCCTCCTCATA+GGG + Chr4:84656000-84656019 None:intergenic 45.0%
!!! TCTTGTTTTGTGGTGTGCCT+TGG + Chr4:84657829-84657848 None:intergenic 45.0%
!!! TGCTTCCAAAGCCGTTTTTC+AGG - Chr4:84654770-84654789 MsG0480023395.01.T01:intron 45.0%
!! AATTTCAATTATTAAAATAT+TGG + Chr4:84654624-84654643 None:intergenic 5.0%
AACATGTGATCTCAGGGCTG+TGG - Chr4:84656519-84656538 MsG0480023395.01.T01:CDS 50.0%
AACCAAGCATCACCTTCACC+TGG + Chr4:84652850-84652869 None:intergenic 50.0%
AACCGGAAATCCATGTGAGC+TGG + Chr4:84658788-84658807 None:intergenic 50.0%
AAGAAGGCGATGTAGGTAGG+TGG + Chr4:84658056-84658075 None:intergenic 50.0%
ACCCAGACCAGATTTCTCCT+TGG - Chr4:84658711-84658730 MsG0480023395.01.T01:intron 50.0%
ACCTACCTACATCGCCTTCT+TGG - Chr4:84658055-84658074 MsG0480023395.01.T01:CDS 50.0%
ACGGTGGAGAAGAAGAGAGA+AGG - Chr4:84652937-84652956 MsG0480023395.01.T01:three_prime_UTR 50.0%
ACGTGAGATGCTTACTCCTG+AGG - Chr4:84658529-84658548 MsG0480023395.01.T01:intron 50.0%
ACTAGGCTCTGTCTTGGAGT+TGG - Chr4:84656982-84657001 MsG0480023395.01.T01:intron 50.0%
AGATCAGCTGATCCATCCTC+AGG + Chr4:84658548-84658567 None:intergenic 50.0%
AGCGGCATAACTTCAGGAGA+CGG - Chr4:84655035-84655054 MsG0480023395.01.T01:intron 50.0%
ATCGAAGGATGGGCATACAC+GGG - Chr4:84656705-84656724 MsG0480023395.01.T01:intron 50.0%
CAAACCTGCCAGAGAAGTGA+TGG + Chr4:84659109-84659128 None:intergenic 50.0%
CAAATCTGGCCCCATCAGTA+TGG - Chr4:84657247-84657266 MsG0480023395.01.T01:intron 50.0%
CACTCGAGCTTTCGTTGAGA+TGG + Chr4:84658130-84658149 None:intergenic 50.0%
CACTGAGCACAAGATGCACT+CGG - Chr4:84657751-84657770 MsG0480023395.01.T01:CDS 50.0%
CAGGAGTGGCAGATAATCAC+TGG - Chr4:84658953-84658972 MsG0480023395.01.T01:intron 50.0%
CATACTGATGGGGCCAGATT+TGG + Chr4:84657249-84657268 None:intergenic 50.0%
CATCTCACGTGCACAACGTA+AGG + Chr4:84658519-84658538 None:intergenic 50.0%
CATTGCCAAGAAGGCGATGT+AGG + Chr4:84658063-84658082 None:intergenic 50.0%
CGATGTAGGTAGGTGGAGTT+GGG + Chr4:84658049-84658068 None:intergenic 50.0%
CGGAATCAACAGGAGCAACA+CGG + Chr4:84656413-84656432 None:intergenic 50.0%
CTACATCGCCTTCTTGGCAA+TGG - Chr4:84658061-84658080 MsG0480023395.01.T01:CDS 50.0%
CTGAGATGCACGTGACTGTA+GGG + Chr4:84657697-84657716 None:intergenic 50.0%
GAAATCGATGGGGCCTTAAC+TGG + Chr4:84654929-84654948 None:intergenic 50.0%
GACCCCGTTGAGTAAATCAC+GGG + Chr4:84655978-84655997 None:intergenic 50.0%
GAGATGCTTACTCCTGAGGA+TGG - Chr4:84658533-84658552 MsG0480023395.01.T01:intron 50.0%
GATCGAAGGATGGGCATACA+CGG - Chr4:84656704-84656723 MsG0480023395.01.T01:intron 50.0%
GATGTAGGTAGGTGGAGTTG+GGG + Chr4:84658048-84658067 None:intergenic 50.0%
GGACCCCGTTGAGTAAATCA+CGG + Chr4:84655979-84655998 None:intergenic 50.0%
GGCATGTGATTGTTCCTCTG+TGG + Chr4:84658852-84658871 None:intergenic 50.0%
GGGACTGCCACGAAAAATCT+TGG - Chr4:84655197-84655216 MsG0480023395.01.T01:intron 50.0%
GTAGTGACTAGGCTCTGTCT+TGG - Chr4:84656976-84656995 MsG0480023395.01.T01:intron 50.0%
TAAGGTTCGGACAGTTCCTC+TGG - Chr4:84656326-84656345 MsG0480023395.01.T01:CDS 50.0%
TGAGGCCAAATGGTCGGATT+TGG - Chr4:84658886-84658905 MsG0480023395.01.T01:intron 50.0%
TGCCACCAAATCCGACCATT+TGG + Chr4:84658894-84658913 None:intergenic 50.0%
TGCCACGTGACATTCTGTTC+TGG + Chr4:84654096-84654115 None:intergenic 50.0%
TGCCAGAACAGAATGTCACG+TGG - Chr4:84654091-84654110 MsG0480023395.01.T01:CDS 50.0%
TGGCCAATCACTTGAGGACA+TGG + Chr4:84653032-84653051 None:intergenic 50.0%
TGTCAGTAGTATGGCCACAG+AGG - Chr4:84658835-84658854 MsG0480023395.01.T01:intron 50.0%
TTATCCGGCTCTTGAAGGTC+AGG - Chr4:84658934-84658953 MsG0480023395.01.T01:intron 50.0%
TTCCAGGTGAAGGTGATGCT+TGG - Chr4:84652845-84652864 MsG0480023395.01.T01:three_prime_UTR 50.0%
TTCTTCATTTCGCGACCCAG+AGG + Chr4:84652885-84652904 None:intergenic 50.0%
! AAGAAGCGTGGGATCTACTG+AGG - Chr4:84655246-84655265 MsG0480023395.01.T01:intron 50.0%
! AGAAGCGTGGGATCTACTGA+GGG - Chr4:84655247-84655266 MsG0480023395.01.T01:intron 50.0%
! CAAGCAGCAGCTTTGACACA+AGG + Chr4:84659579-84659598 None:intergenic 50.0%
! CTTACCATAATGGAGGCTCC+TGG - Chr4:84659083-84659102 MsG0480023395.01.T01:intron 50.0%
! GTTTTGTGGTGTGCCTTGGT+TGG + Chr4:84657825-84657844 None:intergenic 50.0%
! TAAAGATGAGGTGGGAGTGC+TGG - Chr4:84657110-84657129 MsG0480023395.01.T01:intron 50.0%
! TCTGAGATGCACGTGACTGT+AGG + Chr4:84657698-84657717 None:intergenic 50.0%
! TTCCCTGTTGCCTTTTGCGT+TGG + Chr4:84657884-84657903 None:intergenic 50.0%
!! AGTAGGAGGTGGCGGAAATA+AGG - Chr4:84653442-84653461 MsG0480023395.01.T01:CDS 50.0%
!! CAGGAGACGGTAATGGATCA+AGG - Chr4:84655048-84655067 MsG0480023395.01.T01:intron 50.0%
!! CGTGTTGCTCCTGTTGATTC+CGG - Chr4:84656411-84656430 MsG0480023395.01.T01:intron 50.0%
!! CTTGTTTGGTTTGACGACGG+TGG + Chr4:84653679-84653698 None:intergenic 50.0%
!! GGAAGCACCTAAAGACATGG+TGG + Chr4:84654757-84654776 None:intergenic 50.0%
!! GGTTGGCTAGAGTCCTTTTG+AGG + Chr4:84657808-84657827 None:intergenic 50.0%
!! TTCGTTGAGATGGTAGTGGG+TGG + Chr4:84658120-84658139 None:intergenic 50.0%
AACAGGAGCAACACGGCCAA+TGG + Chr4:84656406-84656425 None:intergenic 55.0%
ATGGCCAGGAGCCTCCATTA+TGG + Chr4:84659090-84659109 None:intergenic 55.0%
ATGGCTGCCTCTCCAAAGTC+AGG + Chr4:84656387-84656406 None:intergenic 55.0%
ATGTGATCTCAGGGCTGTGG+TGG - Chr4:84656522-84656541 MsG0480023395.01.T01:CDS 55.0%
CACTCCTGACCTTCAAGAGC+CGG + Chr4:84658941-84658960 None:intergenic 55.0%
CCACGTTGGCCAATCACTTG+AGG + Chr4:84653038-84653057 None:intergenic 55.0%
GAGTGGATGCCGAACAAAGG+AGG - Chr4:84658740-84658759 MsG0480023395.01.T01:intron 55.0%
GCAGAGTCATCACCTTCCAG+AGG + Chr4:84656345-84656364 None:intergenic 55.0%
GCAGGCATCAAACCTTGTCC+TGG + Chr4:84656300-84656319 None:intergenic 55.0%
GCCAACCCAAAAGGAAAGCG+CGG - Chr4:84659667-84659686 MsG0480023395.01.T01:intron 55.0%
GCCAAGAAGGCGATGTAGGT+AGG + Chr4:84658059-84658078 None:intergenic 55.0%
GCGATGTAGGTAGGTGGAGT+TGG + Chr4:84658050-84658069 None:intergenic 55.0%
GGCATCCACTCCACTAACCA+AGG + Chr4:84658731-84658750 None:intergenic 55.0%
GGCCAAATGGTCGGATTTGG+TGG - Chr4:84658889-84658908 MsG0480023395.01.T01:intron 55.0%
GTGGAGTGGATGCCGAACAA+AGG - Chr4:84658737-84658756 MsG0480023395.01.T01:intron 55.0%
GTTCGGACAGTTCCTCTGGA+AGG - Chr4:84656330-84656349 MsG0480023395.01.T01:CDS 55.0%
TACTCAACGGGGTCCCTATG+AGG - Chr4:84655984-84656003 MsG0480023395.01.T01:intron 55.0%
TGGCTATGGTGAGATCACGG+TGG - Chr4:84652921-84652940 MsG0480023395.01.T01:three_prime_UTR 55.0%
TGGCTCGACATTCCAGGTGA+AGG - Chr4:84652835-84652854 MsG0480023395.01.T01:three_prime_UTR 55.0%
! CCAACCCAAAAGGAAAGCGC+GGG - Chr4:84659668-84659687 MsG0480023395.01.T01:intron 55.0%
! CCTCAAGTGATTGGCCAACG+TGG - Chr4:84653035-84653054 MsG0480023395.01.T01:three_prime_UTR 55.0%
! CGCGGATTGAGGAACAACAC+TGG + Chr4:84654802-84654821 None:intergenic 55.0%
! CGGGCATCCTTTGGAGATTC+AGG - Chr4:84656724-84656743 MsG0480023395.01.T01:intron 55.0%
! GACTTTGGAGAGGCAGCCAT+TGG - Chr4:84656387-84656406 MsG0480023395.01.T01:CDS 55.0%
! GATGTCTGGCTCGACATTCC+AGG - Chr4:84652829-84652848 MsG0480023395.01.T01:three_prime_UTR 55.0%
! GGCTCAGTATACGCGGATTG+AGG + Chr4:84654813-84654832 None:intergenic 55.0%
! TCCTCCCGCGCTTTCCTTTT+GGG + Chr4:84659675-84659694 None:intergenic 55.0%
! TTCCTCCCGCGCTTTCCTTT+TGG + Chr4:84659676-84659695 None:intergenic 55.0%
!! AATTTGGGTTGCGGCTGCAG+AGG + Chr4:84658161-84658180 None:intergenic 55.0%
!! GTTGAGATGGTAGTGGGTGG+AGG + Chr4:84658117-84658136 None:intergenic 55.0%
CGGCTCTTGAAGGTCAGGAG+TGG - Chr4:84658939-84658958 MsG0480023395.01.T01:intron 60.0%
CTGCCAGAGAAGTGATGGCC+AGG + Chr4:84659104-84659123 None:intergenic 60.0%
CTGGCCATCACTTCTCTGGC+AGG - Chr4:84659102-84659121 MsG0480023395.01.T01:intron 60.0%
GACGACGGTGGACGTGTCAA+AGG + Chr4:84653667-84653686 None:intergenic 60.0%
GAGGGGACGTGGCTGTTTGA+TGG + Chr4:84657975-84657994 None:intergenic 60.0%
GCTCCTGGCCATCACTTCTC+TGG - Chr4:84659098-84659117 MsG0480023395.01.T01:intron 60.0%
GGGCATACACGGGCATCCTT+TGG - Chr4:84656715-84656734 MsG0480023395.01.T01:intron 60.0%
GTACAGGTGGCTCTCCACGT+TGG + Chr4:84653052-84653071 None:intergenic 60.0%
TCAACGGGGTCCCTATGAGG+AGG - Chr4:84655987-84656006 MsG0480023395.01.T01:intron 60.0%
! ACCCAAAAGGAAAGCGCGGG+AGG - Chr4:84659671-84659690 MsG0480023395.01.T01:intron 60.0%
!! ACGGGCACTGAACAATCGGC+TGG - Chr4:84658571-84658590 MsG0480023395.01.T01:intron 60.0%
!! CCCGCGCTTTCCTTTTGGGT+TGG + Chr4:84659671-84659690 None:intergenic 60.0%
! TTGGGTTGCGGCTGCAGAGG+CGG + Chr4:84658158-84658177 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 84652800 84660141 84652800 ID=MsG0480023395.01;Name=MsG0480023395.01
Chr4 mRNA 84652800 84660141 84652800 ID=MsG0480023395.01.T01;Parent=MsG0480023395.01;Name=MsG0480023395.01.T01;_AED=0.47;_eAED=0.51;_QI=0|0.71|0.75|1|1|1|8|418|723
Chr4 exon 84652800 84653535 84652800 ID=MsG0480023395.01.T01:exon:6157;Parent=MsG0480023395.01.T01
Chr4 exon 84653818 84653866 84653818 ID=MsG0480023395.01.T01:exon:6156;Parent=MsG0480023395.01.T01
Chr4 exon 84653948 84654441 84653948 ID=MsG0480023395.01.T01:exon:6155;Parent=MsG0480023395.01.T01
Chr4 exon 84656196 84656407 84656196 ID=MsG0480023395.01.T01:exon:6154;Parent=MsG0480023395.01.T01
Chr4 exon 84656509 84656674 84656509 ID=MsG0480023395.01.T01:exon:6153;Parent=MsG0480023395.01.T01
Chr4 exon 84657487 84658226 84657487 ID=MsG0480023395.01.T01:exon:6152;Parent=MsG0480023395.01.T01
Chr4 exon 84659867 84659919 84659867 ID=MsG0480023395.01.T01:exon:6151;Parent=MsG0480023395.01.T01
Chr4 exon 84660002 84660141 84660002 ID=MsG0480023395.01.T01:exon:6150;Parent=MsG0480023395.01.T01
Chr4 CDS 84660002 84660141 84660002 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84659867 84659919 84659867 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84657487 84658226 84657487 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84656509 84656674 84656509 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84656196 84656407 84656196 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84653948 84654441 84653948 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84653818 84653866 84653818 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 CDS 84653218 84653535 84653218 ID=MsG0480023395.01.T01:cds;Parent=MsG0480023395.01.T01
Chr4 three_prime_UTR 84652800 84653217 84652800 ID=MsG0480023395.01.T01:three_prime_utr;Parent=MsG0480023395.01.T01
Gene Sequence

>MsG0480023395.01.T01

ATGACTGCTCGTGAACCCACTGTGTTTTTGATGTCTGGCTCGACATTCCAGGTGAAGGTGATGCTTGGTTACAAATTTTCTGCCTCTGGGTCGCGAAATGAAGAAGAAGAATGGAAGGTTGTGGCTATGGTGAGATCACGTGATTTGCCATGTCCTCAAGTGATTGGCCAACGTGGAGAGCCACCTGTACAAAGAGGCAAAATTTTAGGTGGTAGGGTTCCTTATTTTAAAACCACCATGTCTTTAGGTGCTTCCAAAGCCGTTTTTCAGGTTCTGTCCAGTGTTGTTCCTCAATCCGCGTATACTGAGCCTTTTGTCAACACTTCCCAGTTGCGAACAAATTGTATGAAGAAAAGATCCTCAAGGCATAGGTTTTTAATAGAGAGCTCTAGCATGCTTCAAAGCCAGTTAAGGCCCCATCGATTTCCATTTACCAGTGTCAGTTTCTGTGACTATAAGACCTATAGTCATCCATGGTTGCAGACATGTAAATGCCAAAAGGCTGAAAATGTGAGCGGCATAACTTCAGGAGACGGTAATGGATCAAGGTTTGCGAGTGATGTTGAAAAATCTAGTCTGGTAAGCAATGTGATGAGTGCAAAGTCTTCTTTAGAGTTTGAAGATGTTCAACTGTTGGAACAGGAAAAAGAGGTTTTGTCATCCAATGTTACAAATGGGACTGCCACGAAAAATCTTGGTACAATTAGCCTCAACTCTATTGAGGAAGAAGCGTGGGATCTACTGAGGGAGTCTGTAGTTAATTATTGTGGGAATCCTATTGGAACTATTGCTGCAAAGGATCCAAACAGTACCAATGTTTTGAATTATGACCAAGTCTTTATTCGTGATTTTATTCCATCTGGAGTCGCTTTCCTATTGAAGGGAGAGTATGATATTGTTCGTAATTTCATTCTTCATACACTTCAGCTGCAGAGCTGGGAGAAAACAATGGATTGTCATAGTCCAGGACAAGGTTTGATGCCTGCTAGTTTTAAGGTTCGGACAGTTCCTCTGGAAGGTGATGACTCTGCAACAGAAGAGGTTTTGGATCCTGACTTTGGAGAGGCAGCCATTGGCCGTGTTGCTCCTGTTGATTCCGGGCTGTGGTGGATTATTTTACTACGAGCATATGGAAAATGCTCTGGGGATTTATCTGTTCAGGAGAGAGTTGATGTGCAAACAGGAATTAAGATGATTTTGAAGCTTTGTCTTGCTGATGGTTTTGACATGTTCCCAACATTATTAGTAACTGATGGTTCTTGCATGATAGATCGAAGGATGGGCATACACGGGCATCCTTTGGAGATTCAGGCACTGTTTTATTCTGCCTTACGTTGTGCACGTGAGATGCTTACTCCTGAGGATGGATCAGCTGATCTTATACGGGCACTGAACAATCGGCTGGTCGCTCTCTCATTTCATATTAGAGAATATTATTGGATCGATATGAAAAGATTAAATGAAATTTACCGTTACAAGACAGAGGAGTACTCATATGATGCAGTTAATAAATTCAACATATACCCAGACCAGATTTCTCCTTGGTTAGTGGAGTGGATGCCGAACAAAGGAGGCTACTTAATTGGTAACTTACAACCAGCTCACATGGATTTCCGGTTTTTTTCACTAGGAAACTTGTGGTCTGTTGTCAGTAGTATGGCCACAGAGGAACAATCACATGCCATATTGGATCTTATTGAGGCCAAATGGTCGGATTTGGTGGCAGATATGCCACTCAAGATTTGTTATCCGGCTCTTGAAGGTCAGGAGTGGCAGATAATCACTGGCAGTGATCCTAAGAACACGCCTTGGTCTTACCATAATGGAGGCTCCTGGCCATCACTTCTCTGGCAGCTCACAGCTGCATGCATAAAGATGAACAGACCACATATTGCTGCAAAAGCTGTTGAAATTGTTGAGAGACGTATATCAAGAGACAAGTGGCCAGAATATTATGACACGAAAAGATCTCGATTCATTGGAAAACAGTCTCAGTTGTTTCAGACATGGTCAATTGCGGGATACCTTGTGTCAAAGCTGCTGCTTGCAGACCCAAGTAAAGCAAACATACTGATAACTGAAGAGGATTCTGATCTTGTGATTGCTTTGATTAATGCCAACCCAAAAGGAAAGCGCGGGAGGAAAAATTTGAAGCAGACCTACATTGTATGA

Protein sequence

>MsG0480023395.01.T01

MTAREPTVFLMSGSTFQVKVMLGYKFSASGSRNEEEEWKVVAMVRSRDLPCPQVIGQRGEPPVQRGKILGGRVPYFKTTMSLGASKAVFQVLSSVVPQSAYTEPFVNTSQLRTNCMKKRSSRHRFLIESSSMLQSQLRPHRFPFTSVSFCDYKTYSHPWLQTCKCQKAENVSGITSGDGNGSRFASDVEKSSLVSNVMSAKSSLEFEDVQLLEQEKEVLSSNVTNGTATKNLGTISLNSIEEEAWDLLRESVVNYCGNPIGTIAAKDPNSTNVLNYDQVFIRDFIPSGVAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLEGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKRLNEIYRYKTEEYSYDAVNKFNIYPDQISPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNLWSVVSSMATEEQSHAILDLIEAKWSDLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNGGSWPSLLWQLTAACIKMNRPHIAAKAVEIVERRISRDKWPEYYDTKRSRFIGKQSQLFQTWSIAGYLVSKLLLADPSKANILITEEDSDLVIALINANPKGKRGRKNLKQTYIV*