Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015349.01.T01 | XP_013460699.1 | 97.444 | 313 | 4 | 3 | 1 | 309 | 1 | 313 | 0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015349.01.T01 | Q9M2S3 | 53.55 | 338 | 100 | 11 | 1 | 309 | 1 | 310 | 1.17E-79 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015349.01.T01 | A0A072V017 | 97.444 | 313 | 4 | 3 | 1 | 309 | 1 | 313 | 0.0 | 598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048273.01 | MsG0380015349.01 | -0.812092 | 5.045863e-51 | 3.178329e-48 |
| MsG0080048274.01 | MsG0380015349.01 | -0.832397 | 9.679310e-56 | 1.080551e-52 |
| MsG0080048969.01 | MsG0380015349.01 | -0.806500 | 7.982779e-50 | 4.339655e-47 |
| MsG0180000017.01 | MsG0380015349.01 | -0.818317 | 2.087791e-52 | 1.557562e-49 |
| MsG0180000489.01 | MsG0380015349.01 | -0.829180 | 5.946161e-55 | 6.040230e-52 |
| MsG0180000490.01 | MsG0380015349.01 | -0.860139 | 2.543648e-63 | 6.882539e-60 |
| MsG0180000491.01 | MsG0380015349.01 | -0.855492 | 6.086154e-62 | 1.407631e-58 |
| MsG0180000549.01 | MsG0380015349.01 | -0.816202 | 6.243402e-52 | 4.395697e-49 |
| MsG0180000843.01 | MsG0380015349.01 | -0.810093 | 1.368214e-50 | 8.172876e-48 |
| MsG0180001907.01 | MsG0380015349.01 | -0.802413 | 5.676343e-49 | 2.778911e-46 |
| MsG0180002891.01 | MsG0380015349.01 | -0.826178 | 3.127846e-54 | 2.911778e-51 |
| MsG0180002982.01 | MsG0380015349.01 | -0.800827 | 1.200612e-48 | 5.645678e-46 |
| MsG0180003503.01 | MsG0380015349.01 | -0.830774 | 2.429558e-55 | 2.585186e-52 |
| MsG0180004059.01 | MsG0380015349.01 | 0.807528 | 4.838017e-50 | 2.700992e-47 |
| MsG0180004662.01 | MsG0380015349.01 | -0.802772 | 4.788209e-49 | 2.365597e-46 |
| MsG0180004782.01 | MsG0380015349.01 | -0.800973 | 1.120889e-48 | 5.290779e-46 |
| MsG0180004787.01 | MsG0380015349.01 | -0.800201 | 1.610540e-48 | 7.453896e-46 |
| MsG0180004830.01 | MsG0380015349.01 | 0.832899 | 7.264790e-56 | 8.232253e-53 |
| MsG0180005283.01 | MsG0380015349.01 | -0.820192 | 7.808622e-53 | 6.136963e-50 |
| MsG0180005416.01 | MsG0380015349.01 | -0.832967 | 6.986399e-56 | 7.933297e-53 |
| MsG0180005561.01 | MsG0380015349.01 | -0.853110 | 2.968168e-61 | 6.342185e-58 |
| MsG0180005833.01 | MsG0380015349.01 | -0.802227 | 6.199015e-49 | 3.020276e-46 |
| MsG0180005898.01 | MsG0380015349.01 | -0.809767 | 1.608305e-50 | 9.526060e-48 |
| MsG0180005991.01 | MsG0380015349.01 | -0.816477 | 5.420004e-52 | 3.844499e-49 |
| MsG0180006010.01 | MsG0380015349.01 | 0.804803 | 1.812880e-49 | 9.436167e-47 |
| MsG0180006239.01 | MsG0380015349.01 | -0.826522 | 2.589980e-54 | 2.434645e-51 |
| MsG0280006402.01 | MsG0380015349.01 | -0.812248 | 4.665174e-51 | 2.951151e-48 |
| MsG0280010584.01 | MsG0380015349.01 | -0.841821 | 3.765781e-58 | 5.599638e-55 |
| MsG0280010888.01 | MsG0380015349.01 | 0.803560 | 3.288795e-49 | 1.657988e-46 |
| MsG0280011017.01 | MsG0380015349.01 | 0.813820 | 2.109649e-51 | 1.392006e-48 |
| MsG0280011020.01 | MsG0380015349.01 | -0.804501 | 2.095816e-49 | 1.082314e-46 |
| MsG0280011110.01 | MsG0380015349.01 | 0.826564 | 2.531548e-54 | 2.382583e-51 |
| MsG0280011222.01 | MsG0380015349.01 | -0.802338 | 5.881282e-49 | 2.873757e-46 |
| MsG0280011309.01 | MsG0380015349.01 | -0.812973 | 3.237455e-51 | 2.087604e-48 |
| MsG0280011372.01 | MsG0380015349.01 | -0.809512 | 1.824047e-50 | 1.073048e-47 |
| MsG0380011662.01 | MsG0380015349.01 | -0.842539 | 2.431257e-58 | 3.698164e-55 |
| MsG0380012251.01 | MsG0380015349.01 | -0.834705 | 2.568091e-56 | 3.071608e-53 |
| MsG0380012782.01 | MsG0380015349.01 | -0.822365 | 2.463198e-53 | 2.057568e-50 |
| MsG0380013177.01 | MsG0380015349.01 | -0.808644 | 2.798238e-50 | 1.608530e-47 |
| MsG0380014144.01 | MsG0380015349.01 | -0.836018 | 1.196205e-56 | 1.488447e-53 |
| MsG0380014936.01 | MsG0380015349.01 | -0.819392 | 1.190046e-52 | 9.145440e-50 |
| MsG0380015349.01 | MsG0380015393.01 | 0.807476 | 4.962537e-50 | 2.766781e-47 |
| MsG0380015349.01 | MsG0380015501.01 | -0.802256 | 6.114495e-49 | 2.981366e-46 |
| MsG0380015349.01 | MsG0380016151.01 | -0.848831 | 4.770836e-60 | 8.867802e-57 |
| MsG0380015349.01 | MsG0380016463.01 | 0.847301 | 1.261105e-59 | 2.231443e-56 |
| MsG0380015349.01 | MsG0380016997.01 | -0.812020 | 5.231002e-51 | 3.288486e-48 |
| MsG0380015349.01 | MsG0380017353.01 | -0.819347 | 1.218039e-52 | 9.348382e-50 |
| MsG0380015349.01 | MsG0380017780.01 | 0.845102 | 5.007437e-59 | 8.255112e-56 |
| MsG0380015349.01 | MsG0480018100.01 | -0.800115 | 1.676449e-48 | 7.742133e-46 |
| MsG0380015349.01 | MsG0480018323.01 | -0.808998 | 2.350734e-50 | 1.364013e-47 |
| MsG0380015349.01 | MsG0480019485.01 | -0.817216 | 3.699123e-52 | 2.677578e-49 |
| MsG0380015349.01 | MsG0480019974.01 | -0.821119 | 4.782045e-53 | 3.856223e-50 |
| MsG0380015349.01 | MsG0480020473.01 | -0.808506 | 2.995488e-50 | 1.715792e-47 |
| MsG0380015349.01 | MsG0480020928.01 | 0.845505 | 3.895070e-59 | 6.504852e-56 |
| MsG0380015349.01 | MsG0480021999.01 | -0.850892 | 1.265836e-60 | 2.516626e-57 |
| MsG0380015349.01 | MsG0480022002.01 | -0.820058 | 8.383639e-53 | 6.564475e-50 |
| MsG0380015349.01 | MsG0480022617.01 | -0.810867 | 9.308575e-51 | 5.675961e-48 |
| MsG0380015349.01 | MsG0480022664.01 | -0.855444 | 6.282870e-62 | 1.450897e-58 |
| MsG0380015349.01 | MsG0480023104.01 | -0.808153 | 3.561732e-50 | 2.021386e-47 |
| MsG0380015349.01 | MsG0480023148.01 | -0.824294 | 8.724097e-54 | 7.695108e-51 |
| MsG0380015349.01 | MsG0480023211.01 | -0.807190 | 5.704988e-50 | 3.157168e-47 |
| MsG0380015349.01 | MsG0480023466.01 | -0.809482 | 1.851646e-50 | 1.088405e-47 |
| MsG0380015349.01 | MsG0480023498.01 | -0.829027 | 6.474544e-55 | 6.546443e-52 |
| MsG0380015349.01 | MsG0480023616.01 | -0.837389 | 5.350291e-57 | 6.938769e-54 |
| MsG0380015349.01 | MsG0480023740.01 | -0.828208 | 1.021752e-54 | 1.008829e-51 |
| MsG0380015349.01 | MsG0480023821.01 | -0.826724 | 2.318577e-54 | 2.192098e-51 |
| MsG0380015349.01 | MsG0580024201.01 | -0.835787 | 1.369237e-56 | 1.691965e-53 |
| MsG0380015349.01 | MsG0580024360.01 | -0.810382 | 1.184916e-50 | 7.131662e-48 |
| MsG0380015349.01 | MsG0580024386.01 | -0.815743 | 7.904765e-52 | 5.496155e-49 |
| MsG0380015349.01 | MsG0580024538.01 | -0.824468 | 7.940439e-54 | 7.039023e-51 |
| MsG0380015349.01 | MsG0580024763.01 | -0.821245 | 4.473629e-53 | 3.619970e-50 |
| MsG0380015349.01 | MsG0580024764.01 | -0.811356 | 7.295684e-51 | 4.505978e-48 |
| MsG0380015349.01 | MsG0580024766.01 | -0.814224 | 1.718034e-51 | 1.146079e-48 |
| MsG0380015349.01 | MsG0580025301.01 | -0.838942 | 2.130924e-57 | 2.898179e-54 |
| MsG0380015349.01 | MsG0580025317.01 | -0.805852 | 1.092701e-49 | 5.843172e-47 |
| MsG0380015349.01 | MsG0580025447.01 | -0.803086 | 4.122034e-49 | 2.052683e-46 |
| MsG0380015349.01 | MsG0580026050.01 | -0.806733 | 7.125669e-50 | 3.897017e-47 |
| MsG0380015349.01 | MsG0580026291.01 | -0.811356 | 7.293834e-51 | 4.504864e-48 |
| MsG0380015349.01 | MsG0580027348.01 | -0.824256 | 8.906098e-54 | 7.847324e-51 |
| MsG0380015349.01 | MsG0580027732.01 | -0.806388 | 8.429988e-50 | 4.569565e-47 |
| MsG0380015349.01 | MsG0580028092.01 | -0.835623 | 1.506396e-56 | 1.852228e-53 |
| MsG0380015349.01 | MsG0580028093.01 | -0.857014 | 2.178199e-62 | 5.299243e-59 |
| MsG0380015349.01 | MsG0580028177.01 | -0.849527 | 3.053734e-60 | 5.805258e-57 |
| MsG0380015349.01 | MsG0580028397.01 | -0.812828 | 3.483694e-51 | 2.237656e-48 |
| MsG0380015349.01 | MsG0580028495.01 | -0.822739 | 2.015938e-53 | 1.701981e-50 |
| MsG0380015349.01 | MsG0580028587.01 | 0.805649 | 1.205380e-49 | 6.411819e-47 |
| MsG0380015349.01 | MsG0580028925.01 | -0.802246 | 6.143763e-49 | 2.994928e-46 |
| MsG0380015349.01 | MsG0580029394.01 | -0.801433 | 9.025176e-49 | 4.309550e-46 |
| MsG0380015349.01 | MsG0580029433.01 | -0.820793 | 5.685428e-53 | 4.543094e-50 |
| MsG0380015349.01 | MsG0580030063.01 | -0.834264 | 3.313691e-56 | 3.912151e-53 |
| MsG0380015349.01 | MsG0680031996.01 | -0.811956 | 5.401825e-51 | 3.389990e-48 |
| MsG0380015349.01 | MsG0680031997.01 | -0.821987 | 3.014065e-53 | 2.490425e-50 |
| MsG0380015349.01 | MsG0680032000.01 | -0.848847 | 4.721112e-60 | 8.780107e-57 |
| MsG0380015349.01 | MsG0680032002.01 | -0.847018 | 1.508137e-59 | 2.644473e-56 |
| MsG0380015349.01 | MsG0680032003.01 | -0.840281 | 9.554195e-58 | 1.354310e-54 |
| MsG0380015349.01 | MsG0680035664.01 | -0.830237 | 3.289232e-55 | 3.445544e-52 |
| MsG0380015349.01 | MsG0680035665.01 | -0.803181 | 3.940670e-49 | 1.967240e-46 |
| MsG0380015349.01 | MsG0780036060.01 | 0.818452 | 1.946074e-52 | 1.457421e-49 |
| MsG0380015349.01 | MsG0780036583.01 | -0.800995 | 1.109337e-48 | 5.239347e-46 |
| MsG0380015349.01 | MsG0780036584.01 | -0.819213 | 1.307231e-52 | 9.996613e-50 |
| MsG0380015349.01 | MsG0780036846.01 | -0.800625 | 1.319963e-48 | 6.175353e-46 |
| MsG0380015349.01 | MsG0780037453.01 | -0.810857 | 9.358213e-51 | 5.704631e-48 |
| MsG0380015349.01 | MsG0780038914.01 | 0.804851 | 1.771598e-49 | 9.232792e-47 |
| MsG0380015349.01 | MsG0780039795.01 | -0.862520 | 4.781124e-64 | 1.404271e-60 |
| MsG0380015349.01 | MsG0780039805.01 | -0.846251 | 2.443163e-59 | 4.179480e-56 |
| MsG0380015349.01 | MsG0780039986.01 | -0.851010 | 1.172233e-60 | 2.339763e-57 |
| MsG0380015349.01 | MsG0780040154.01 | -0.817536 | 3.134460e-52 | 2.288791e-49 |
| MsG0380015349.01 | MsG0780040155.01 | -0.852853 | 3.513512e-61 | 7.443152e-58 |
| MsG0380015349.01 | MsG0780040175.01 | -0.836356 | 9.816729e-57 | 1.234171e-53 |
| MsG0380015349.01 | MsG0780040319.01 | -0.833420 | 5.388304e-56 | 6.202155e-53 |
| MsG0380015349.01 | MsG0780040701.01 | -0.801244 | 9.868124e-49 | 4.689747e-46 |
| MsG0380015349.01 | MsG0780041002.01 | -0.824087 | 9.761912e-54 | 8.560401e-51 |
| MsG0380015349.01 | MsG0780041385.01 | -0.801277 | 9.716007e-49 | 4.621228e-46 |
| MsG0380015349.01 | MsG0780041403.01 | 0.802627 | 5.129346e-49 | 2.524707e-46 |
| MsG0380015349.01 | MsG0780041668.01 | -0.813199 | 2.889018e-51 | 1.874291e-48 |
| MsG0380015349.01 | MsG0780041778.01 | -0.808283 | 3.342010e-50 | 1.903182e-47 |
| MsG0380015349.01 | MsG0780041828.01 | -0.813953 | 1.971451e-51 | 1.305510e-48 |
| MsG0380015349.01 | MsG0880041850.01 | -0.805215 | 1.486422e-49 | 7.819012e-47 |
| MsG0380015349.01 | MsG0880042030.01 | -0.806979 | 6.324399e-50 | 3.480751e-47 |
| MsG0380015349.01 | MsG0880042256.01 | -0.826424 | 2.734217e-54 | 2.563231e-51 |
| MsG0380015349.01 | MsG0880042690.01 | -0.809046 | 2.295921e-50 | 1.333960e-47 |
| MsG0380015349.01 | MsG0880043235.01 | -0.835414 | 1.701174e-56 | 2.078893e-53 |
| MsG0380015349.01 | MsG0880043515.01 | -0.801916 | 7.182709e-49 | 3.471983e-46 |
| MsG0380015349.01 | MsG0880044105.01 | -0.830056 | 3.639589e-55 | 3.792287e-52 |
| MsG0380015349.01 | MsG0880044318.01 | -0.812420 | 4.277515e-51 | 2.718570e-48 |
| MsG0380015349.01 | MsG0880044636.01 | -0.817299 | 3.543719e-52 | 2.570858e-49 |
| MsG0380015349.01 | MsG0880044834.01 | -0.818268 | 2.141941e-52 | 1.595736e-49 |
| MsG0380015349.01 | MsG0880045031.01 | -0.816516 | 5.311048e-52 | 3.771307e-49 |
| MsG0380015349.01 | MsG0880045377.01 | -0.818490 | 1.907391e-52 | 1.429836e-49 |
| MsG0380015349.01 | MsG0880045378.01 | -0.830055 | 3.642918e-55 | 3.795610e-52 |
| MsG0380015349.01 | MsG0880045423.01 | -0.829246 | 5.731812e-55 | 5.833927e-52 |
| MsG0380015349.01 | MsG0880046048.01 | -0.820088 | 8.252404e-53 | 6.467266e-50 |
| MsG0380015349.01 | MsG0880046324.01 | -0.803608 | 3.214086e-49 | 1.622264e-46 |
| MsG0380015349.01 | MsG0880046408.01 | -0.802777 | 4.774716e-49 | 2.359318e-46 |
| MsG0380015349.01 | MsG0880046969.01 | -0.824132 | 9.525637e-54 | 8.364071e-51 |
| MsG0380015349.01 | MsG0880047111.01 | -0.832434 | 9.472923e-56 | 1.058674e-52 |
| MsG0380015349.01 | MsG0880047112.01 | -0.866714 | 2.329403e-65 | 7.929103e-62 |
| MsG0380015349.01 | MsG0880047312.01 | 0.800739 | 1.251256e-48 | 5.870877e-46 |
| MsG0380015349.01 | MsG0880047537.01 | 0.810976 | 8.819238e-51 | 5.393553e-48 |
| MsG0380015349.01 | MsG0880047540.01 | -0.835271 | 1.849628e-56 | 2.250701e-53 |
| MsG0280006587.01 | MsG0380015349.01 | -0.801786 | 7.640659e-49 | 3.681119e-46 |
| MsG0280006706.01 | MsG0380015349.01 | -0.809467 | 1.865262e-50 | 1.095996e-47 |
| MsG0280006787.01 | MsG0380015349.01 | -0.826691 | 2.360684e-54 | 2.229880e-51 |
| MsG0280007016.01 | MsG0380015349.01 | -0.808506 | 2.995488e-50 | 1.715792e-47 |
| MsG0280007201.01 | MsG0380015349.01 | 0.806669 | 7.353680e-50 | 4.014762e-47 |
| MsG0280007511.01 | MsG0380015349.01 | -0.837371 | 5.408285e-57 | 7.010130e-54 |
| MsG0280007561.01 | MsG0380015349.01 | -0.801877 | 7.316583e-49 | 3.533411e-46 |
| MsG0280008309.01 | MsG0380015349.01 | -0.810939 | 8.981989e-51 | 5.487607e-48 |
| MsG0280009103.01 | MsG0380015349.01 | -0.833876 | 4.144473e-56 | 4.836433e-53 |
| MsG0280009434.01 | MsG0380015349.01 | -0.804476 | 2.121519e-49 | 1.094891e-46 |
| MsG0280009435.01 | MsG0380015349.01 | -0.818364 | 2.037546e-52 | 1.522154e-49 |
| MsG0280009436.01 | MsG0380015349.01 | -0.811674 | 6.222490e-51 | 3.875481e-48 |
| MsG0280010523.01 | MsG0380015349.01 | -0.802036 | 6.787238e-49 | 3.290846e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015349.01.T01 | MTR_3g068035 | 97.444 | 313 | 4 | 3 | 1 | 309 | 1 | 313 | 0.0 | 598 |
| MsG0380015349.01.T01 | MTR_1g044155 | 64.681 | 235 | 80 | 1 | 75 | 306 | 124 | 358 | 4.35e-79 | 244 |
| MsG0380015349.01.T01 | MTR_1g079810 | 51.685 | 267 | 114 | 4 | 1 | 258 | 1 | 261 | 1.43e-69 | 218 |
| MsG0380015349.01.T01 | MTR_5g091630 | 52.232 | 224 | 84 | 2 | 77 | 300 | 47 | 247 | 2.30e-69 | 216 |
| MsG0380015349.01.T01 | MTR_1g073860 | 76.974 | 152 | 35 | 0 | 75 | 226 | 92 | 243 | 1.96e-68 | 216 |
| MsG0380015349.01.T01 | MTR_8g036060 | 62.562 | 203 | 68 | 1 | 28 | 230 | 45 | 239 | 3.78e-67 | 212 |
| MsG0380015349.01.T01 | MTR_5g080580 | 47.401 | 327 | 147 | 6 | 1 | 303 | 1 | 326 | 8.99e-66 | 209 |
| MsG0380015349.01.T01 | MTR_5g011520 | 61.780 | 191 | 61 | 1 | 53 | 231 | 64 | 254 | 4.39e-65 | 207 |
| MsG0380015349.01.T01 | MTR_7g080980 | 67.516 | 157 | 45 | 1 | 86 | 242 | 66 | 216 | 1.40e-61 | 197 |
| MsG0380015349.01.T01 | MTR_4g098450 | 66.480 | 179 | 58 | 1 | 54 | 230 | 51 | 229 | 2.34e-60 | 194 |
| MsG0380015349.01.T01 | MTR_3g100470 | 44.030 | 268 | 112 | 10 | 58 | 309 | 45 | 290 | 1.21e-57 | 187 |
| MsG0380015349.01.T01 | MTR_5g066020 | 49.171 | 181 | 82 | 4 | 86 | 256 | 60 | 240 | 7.82e-45 | 153 |
| MsG0380015349.01.T01 | MTR_5g089600 | 37.423 | 163 | 91 | 2 | 73 | 224 | 73 | 235 | 1.03e-29 | 113 |
| MsG0380015349.01.T01 | MTR_6g061670 | 43.966 | 116 | 62 | 1 | 104 | 216 | 130 | 245 | 6.97e-24 | 99.8 |
| MsG0380015349.01.T01 | MTR_6g061670 | 43.966 | 116 | 62 | 1 | 104 | 216 | 125 | 240 | 7.67e-24 | 99.4 |
| MsG0380015349.01.T01 | MTR_5g010330 | 36.416 | 173 | 103 | 4 | 77 | 243 | 104 | 275 | 9.83e-24 | 99.4 |
| MsG0380015349.01.T01 | MTR_5g089700 | 36.646 | 161 | 92 | 3 | 69 | 220 | 67 | 226 | 3.18e-23 | 95.9 |
| MsG0380015349.01.T01 | MTR_1g073870 | 46.053 | 152 | 35 | 4 | 75 | 226 | 50 | 154 | 4.28e-23 | 95.5 |
| MsG0380015349.01.T01 | MTR_4g057487 | 33.929 | 168 | 99 | 4 | 69 | 226 | 11 | 176 | 5.54e-23 | 95.5 |
| MsG0380015349.01.T01 | MTR_1g061530 | 42.982 | 114 | 61 | 2 | 107 | 216 | 144 | 257 | 1.20e-22 | 97.1 |
| MsG0380015349.01.T01 | MTR_1g079780 | 42.857 | 112 | 63 | 1 | 107 | 217 | 112 | 223 | 2.38e-22 | 95.5 |
| MsG0380015349.01.T01 | MTR_1g032910 | 32.530 | 166 | 96 | 5 | 73 | 224 | 97 | 260 | 2.02e-21 | 92.4 |
| MsG0380015349.01.T01 | MTR_1g053685 | 32.515 | 163 | 101 | 2 | 73 | 226 | 81 | 243 | 2.15e-21 | 92.0 |
| MsG0380015349.01.T01 | MTR_4g057525 | 33.333 | 162 | 98 | 3 | 73 | 224 | 32 | 193 | 3.08e-21 | 90.9 |
| MsG0380015349.01.T01 | MTR_5g089090 | 34.177 | 158 | 88 | 2 | 77 | 223 | 28 | 180 | 4.20e-21 | 89.7 |
| MsG0380015349.01.T01 | MTR_7g077120 | 38.514 | 148 | 85 | 2 | 75 | 216 | 125 | 272 | 8.10e-20 | 88.6 |
| MsG0380015349.01.T01 | MTR_8g098390 | 36.496 | 137 | 83 | 3 | 96 | 229 | 158 | 293 | 1.05e-18 | 85.5 |
| MsG0380015349.01.T01 | MTR_1g076710 | 43.966 | 116 | 61 | 2 | 104 | 216 | 134 | 248 | 1.20e-18 | 85.5 |
| MsG0380015349.01.T01 | MTR_8g036160 | 36.943 | 157 | 83 | 3 | 107 | 259 | 145 | 289 | 1.24e-18 | 85.5 |
| MsG0380015349.01.T01 | MTR_7g116320 | 42.982 | 114 | 63 | 2 | 104 | 216 | 143 | 255 | 3.08e-18 | 84.3 |
| MsG0380015349.01.T01 | MTR_4g098460 | 36.486 | 148 | 77 | 4 | 77 | 216 | 57 | 195 | 1.00e-17 | 82.0 |
| MsG0380015349.01.T01 | MTR_7g116320 | 42.063 | 126 | 67 | 3 | 104 | 224 | 143 | 267 | 1.28e-17 | 81.6 |
| MsG0380015349.01.T01 | MTR_8g031100 | 41.096 | 146 | 80 | 3 | 77 | 216 | 125 | 270 | 2.37e-17 | 81.6 |
| MsG0380015349.01.T01 | MTR_7g074935 | 43.363 | 113 | 61 | 1 | 107 | 216 | 130 | 242 | 2.38e-17 | 81.6 |
| MsG0380015349.01.T01 | MTR_5g011680 | 35.115 | 131 | 71 | 3 | 107 | 230 | 145 | 268 | 9.78e-17 | 79.3 |
| MsG0380015349.01.T01 | MTR_4g098460 | 36.667 | 150 | 79 | 4 | 77 | 216 | 57 | 200 | 2.38e-16 | 78.2 |
| MsG0380015349.01.T01 | MTR_4g055813 | 37.903 | 124 | 75 | 2 | 107 | 228 | 22 | 145 | 4.51e-16 | 77.4 |
| MsG0380015349.01.T01 | MTR_8g078930 | 35.714 | 126 | 71 | 3 | 108 | 224 | 5 | 129 | 4.85e-16 | 74.7 |
| MsG0380015349.01.T01 | MTR_4g069110 | 36.634 | 101 | 64 | 0 | 71 | 171 | 28 | 128 | 7.12e-16 | 74.3 |
| MsG0380015349.01.T01 | MTR_5g011620 | 31.210 | 157 | 92 | 4 | 108 | 262 | 119 | 261 | 2.40e-15 | 77.0 |
| MsG0380015349.01.T01 | MTR_4g055803 | 39.655 | 116 | 64 | 2 | 107 | 216 | 128 | 243 | 2.66e-15 | 76.3 |
| MsG0380015349.01.T01 | MTR_4g055833 | 41.176 | 119 | 58 | 3 | 107 | 216 | 125 | 240 | 3.72e-15 | 75.5 |
| MsG0380015349.01.T01 | MTR_4g101990 | 42.982 | 114 | 61 | 1 | 107 | 216 | 147 | 260 | 1.31e-14 | 73.6 |
| MsG0380015349.01.T01 | MTR_6g060670 | 40.541 | 111 | 64 | 2 | 107 | 217 | 180 | 288 | 1.79e-14 | 73.2 |
| MsG0380015349.01.T01 | MTR_5g011610 | 33.333 | 117 | 75 | 2 | 108 | 223 | 62 | 176 | 1.88e-14 | 73.2 |
| MsG0380015349.01.T01 | MTR_5g011610 | 36.559 | 93 | 59 | 0 | 103 | 195 | 211 | 303 | 1.02e-12 | 68.2 |
| MsG0380015349.01.T01 | MTR_1g071850 | 33.113 | 151 | 73 | 3 | 85 | 235 | 38 | 160 | 2.50e-13 | 67.8 |
| MsG0380015349.01.T01 | MTR_1g038960 | 33.333 | 144 | 88 | 4 | 78 | 217 | 125 | 264 | 1.38e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015349.01.T01 | AT3G55560 | 53.550 | 338 | 100 | 11 | 1 | 309 | 1 | 310 | 1.19e-80 | 247 |
| MsG0380015349.01.T01 | AT4G14465 | 62.613 | 222 | 66 | 3 | 77 | 297 | 67 | 272 | 8.56e-76 | 234 |
| MsG0380015349.01.T01 | AT1G76500 | 60.541 | 185 | 63 | 2 | 53 | 228 | 49 | 232 | 2.98e-69 | 218 |
| MsG0380015349.01.T01 | AT2G42940 | 49.778 | 225 | 86 | 3 | 76 | 300 | 52 | 249 | 1.29e-64 | 204 |
| MsG0380015349.01.T01 | AT2G45430 | 56.170 | 235 | 87 | 6 | 77 | 303 | 89 | 315 | 9.08e-64 | 204 |
| MsG0380015349.01.T01 | AT3G04570 | 53.061 | 245 | 88 | 5 | 1 | 226 | 1 | 237 | 1.31e-63 | 204 |
| MsG0380015349.01.T01 | AT3G60870 | 52.423 | 227 | 86 | 4 | 77 | 303 | 59 | 263 | 3.12e-63 | 201 |
| MsG0380015349.01.T01 | AT2G35270 | 65.584 | 154 | 53 | 0 | 77 | 230 | 78 | 231 | 1.17e-62 | 200 |
| MsG0380015349.01.T01 | AT4G22810 | 70.064 | 157 | 44 | 1 | 77 | 230 | 105 | 261 | 8.10e-59 | 191 |
| MsG0380015349.01.T01 | AT4G12050 | 69.677 | 155 | 46 | 1 | 77 | 230 | 118 | 272 | 2.24e-58 | 191 |
| MsG0380015349.01.T01 | AT4G35390 | 71.333 | 150 | 41 | 1 | 77 | 224 | 63 | 212 | 4.19e-56 | 184 |
| MsG0380015349.01.T01 | AT5G49700 | 51.010 | 198 | 74 | 3 | 77 | 251 | 56 | 253 | 6.47e-56 | 182 |
| MsG0380015349.01.T01 | AT4G17800 | 66.207 | 145 | 49 | 0 | 86 | 230 | 91 | 235 | 2.59e-55 | 181 |
| MsG0380015349.01.T01 | AT1G20900 | 58.730 | 189 | 69 | 1 | 47 | 226 | 56 | 244 | 2.90e-53 | 177 |
| MsG0380015349.01.T01 | AT1G14490 | 50.877 | 171 | 75 | 3 | 67 | 230 | 14 | 182 | 1.19e-42 | 147 |
| MsG0380015349.01.T01 | AT1G14490 | 52.500 | 160 | 67 | 3 | 78 | 230 | 6 | 163 | 2.92e-42 | 145 |
| MsG0380015349.01.T01 | AT2G33620 | 43.243 | 148 | 80 | 3 | 72 | 216 | 132 | 278 | 8.27e-25 | 102 |
| MsG0380015349.01.T01 | AT2G33620 | 43.243 | 148 | 80 | 3 | 72 | 216 | 132 | 278 | 8.27e-25 | 102 |
| MsG0380015349.01.T01 | AT2G33620 | 43.243 | 148 | 80 | 3 | 72 | 216 | 132 | 278 | 8.27e-25 | 102 |
| MsG0380015349.01.T01 | AT2G33620 | 43.243 | 148 | 80 | 3 | 72 | 216 | 132 | 278 | 8.27e-25 | 102 |
| MsG0380015349.01.T01 | AT4G12080 | 44.538 | 119 | 59 | 2 | 107 | 220 | 173 | 289 | 1.14e-24 | 102 |
| MsG0380015349.01.T01 | AT4G25320 | 45.133 | 113 | 59 | 1 | 107 | 216 | 169 | 281 | 1.61e-23 | 100 |
| MsG0380015349.01.T01 | AT4G17950 | 42.759 | 145 | 76 | 3 | 77 | 216 | 196 | 338 | 2.14e-23 | 100 |
| MsG0380015349.01.T01 | AT5G51590 | 44.348 | 115 | 57 | 2 | 107 | 216 | 181 | 293 | 3.46e-23 | 99.4 |
| MsG0380015349.01.T01 | AT2G45850 | 41.096 | 146 | 80 | 3 | 77 | 216 | 132 | 277 | 6.09e-23 | 97.4 |
| MsG0380015349.01.T01 | AT2G45850 | 41.096 | 146 | 80 | 3 | 77 | 216 | 132 | 277 | 6.09e-23 | 97.4 |
| MsG0380015349.01.T01 | AT5G62260 | 38.710 | 124 | 73 | 1 | 104 | 224 | 160 | 283 | 6.74e-23 | 96.3 |
| MsG0380015349.01.T01 | AT1G63470 | 37.415 | 147 | 85 | 3 | 77 | 217 | 147 | 292 | 1.79e-22 | 96.7 |
| MsG0380015349.01.T01 | AT3G04590 | 42.727 | 110 | 63 | 0 | 107 | 216 | 174 | 283 | 3.10e-22 | 95.1 |
| MsG0380015349.01.T01 | AT3G04590 | 42.727 | 110 | 63 | 0 | 107 | 216 | 174 | 283 | 3.77e-22 | 96.3 |
| MsG0380015349.01.T01 | AT5G62260 | 39.655 | 116 | 67 | 1 | 104 | 216 | 160 | 275 | 8.15e-22 | 95.1 |
| MsG0380015349.01.T01 | AT5G62260 | 39.655 | 116 | 67 | 1 | 104 | 216 | 160 | 275 | 8.15e-22 | 95.1 |
| MsG0380015349.01.T01 | AT2G45850 | 40.136 | 147 | 82 | 3 | 77 | 217 | 132 | 278 | 3.58e-21 | 91.7 |
| MsG0380015349.01.T01 | AT4G00200 | 43.103 | 116 | 63 | 1 | 107 | 219 | 126 | 241 | 9.28e-18 | 82.8 |
| MsG0380015349.01.T01 | AT4G00200 | 43.103 | 116 | 63 | 1 | 107 | 219 | 126 | 241 | 9.28e-18 | 82.8 |
| MsG0380015349.01.T01 | AT4G22770 | 43.333 | 120 | 65 | 1 | 107 | 223 | 153 | 272 | 1.52e-17 | 82.0 |
| MsG0380015349.01.T01 | AT4G22770 | 43.333 | 120 | 65 | 1 | 107 | 223 | 153 | 272 | 1.52e-17 | 82.0 |
| MsG0380015349.01.T01 | AT5G46640 | 40.972 | 144 | 80 | 2 | 77 | 217 | 155 | 296 | 1.61e-16 | 79.7 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 125 | 274 | 1.93e-16 | 79.3 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 125 | 274 | 1.93e-16 | 79.3 |
| MsG0380015349.01.T01 | AT3G61310 | 36.986 | 146 | 86 | 2 | 77 | 216 | 134 | 279 | 2.00e-16 | 79.3 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 119 | 268 | 2.42e-16 | 79.0 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 119 | 268 | 2.42e-16 | 79.0 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 119 | 268 | 2.42e-16 | 79.0 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 119 | 268 | 2.42e-16 | 79.0 |
| MsG0380015349.01.T01 | AT1G63480 | 32.051 | 156 | 94 | 4 | 67 | 216 | 119 | 268 | 2.42e-16 | 79.0 |
Find 101 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGAGATACTTTCGCTTTC+GGG | 0.112808 | 3:-68883819 | MsG0380015349.01.T01:CDS |
| GCAGGTCCTTTGGTTGCTTC+TGG | 0.205503 | 3:-68883705 | MsG0380015349.01.T01:CDS |
| GTACCATTATGCAACAAATT+TGG | 0.220914 | 3:+68883456 | None:intergenic |
| CAGGAGCAGCCGGCTGTCTA+AGG | 0.232707 | 3:+68883868 | None:intergenic |
| GTTGTTGGTGGTTCTGTTGC+AGG | 0.265821 | 3:-68883723 | MsG0380015349.01.T01:CDS |
| CCTTCTCCGGCTGGAGCTAC+TGG | 0.276244 | 3:-68883780 | MsG0380015349.01.T01:CDS |
| TTCTTCTCAAGGTTTGGAAT+TGG | 0.278560 | 3:-68883532 | MsG0380015349.01.T01:CDS |
| GGTTATAACAATGGGTGGTT+TGG | 0.288461 | 3:+68884034 | None:intergenic |
| TTGCTGTTGCTGCTGTTTGT+TGG | 0.296688 | 3:+68884170 | None:intergenic |
| GAAGGAGGAGGACGAGGAGG+TGG | 0.303163 | 3:+68883402 | None:intergenic |
| GTTATAACAATGGGTGGTTT+GGG | 0.305692 | 3:+68884035 | None:intergenic |
| AAATGCCTCATGATGTGTTT+TGG | 0.306421 | 3:-68883431 | MsG0380015349.01.T01:CDS |
| CCTCCAAATTTGTTGCATAA+TGG | 0.306945 | 3:-68883459 | MsG0380015349.01.T01:CDS |
| TCTTCTCAAGGTTTGGAATT+GGG | 0.309314 | 3:-68883531 | MsG0380015349.01.T01:CDS |
| GGTTGCTTCTGGACCTGTTA+TGG | 0.315696 | 3:-68883694 | MsG0380015349.01.T01:CDS |
| TGTTTATTTAGCTGGTGGTC+AGG | 0.322450 | 3:-68883751 | MsG0380015349.01.T01:CDS |
| GGTGGTCAGGGGCAGGTTGT+TGG | 0.325929 | 3:-68883738 | MsG0380015349.01.T01:CDS |
| GGTGGTGTTATTACTCTTCA+TGG | 0.329783 | 3:-68883846 | MsG0380015349.01.T01:CDS |
| TAGCTCTTCTTCTCAAGGTT+TGG | 0.337613 | 3:-68883538 | MsG0380015349.01.T01:CDS |
| ATTCGAGATACTTTCGCTTT+CGG | 0.341376 | 3:-68883820 | MsG0380015349.01.T01:CDS |
| CTACCTCCGCCTTCTCCGGC+TGG | 0.357947 | 3:-68883789 | MsG0380015349.01.T01:CDS |
| ACATGGCTTCTTAGCGCGTT+GGG | 0.359556 | 3:+68884002 | None:intergenic |
| GAAAAGAGAGCAAGAGTTGA+TGG | 0.369566 | 3:-68884219 | MsG0380015349.01.T01:CDS |
| GGATTAACTGTTTATTTAGC+TGG | 0.378249 | 3:-68883759 | MsG0380015349.01.T01:CDS |
| GTAGCAGCAATAACCATAAC+AGG | 0.415453 | 3:+68883681 | None:intergenic |
| GTGGGCTGGAAATGTGGCTA+TGG | 0.419505 | 3:-68884288 | MsG0380015349.01.T01:CDS |
| GGAGGAGGACGAGGAGGTGG+AGG | 0.420358 | 3:+68883405 | None:intergenic |
| TTTAGCTGGTGGTCAGGGGC+AGG | 0.423340 | 3:-68883745 | MsG0380015349.01.T01:CDS |
| CTTAGACAGCCGGCTGCTCC+TGG | 0.434867 | 3:-68883867 | MsG0380015349.01.T01:CDS |
| TGGTTCTGTTGCAGGTCCTT+TGG | 0.443762 | 3:-68883715 | MsG0380015349.01.T01:CDS |
| GGTCAGGGGCAGGTTGTTGG+TGG | 0.444022 | 3:-68883735 | MsG0380015349.01.T01:CDS |
| CCACTGCTACCTGGCTCAGA+TGG | 0.446968 | 3:+68884101 | None:intergenic |
| CTCCGACCACCACTGCTACC+TGG | 0.451310 | 3:+68884092 | None:intergenic |
| CGCGCTAAGAAGCCATGTCT+TGG | 0.453833 | 3:-68883997 | MsG0380015349.01.T01:CDS |
| ATGGCAAATCGTTGGTGGGC+TGG | 0.456372 | 3:-68884302 | MsG0380015349.01.T01:CDS |
| GACATGGCTTCTTAGCGCGT+TGG | 0.461821 | 3:+68884001 | None:intergenic |
| AGCTAACTCTTTCAGAAAGA+AGG | 0.464345 | 3:+68883384 | None:intergenic |
| GTTACTAGCTCTTCTTCTCA+AGG | 0.469725 | 3:-68883543 | MsG0380015349.01.T01:CDS |
| GTTTATTTAGCTGGTGGTCA+GGG | 0.471442 | 3:-68883750 | MsG0380015349.01.T01:CDS |
| CACTGCTACCTGGCTCAGAT+GGG | 0.484019 | 3:+68884102 | None:intergenic |
| GTGACGGCGGTTAGCAAAGT+TGG | 0.484913 | 3:+68883938 | None:intergenic |
| CAGAAAGAAGGAGGAGGACG+AGG | 0.494395 | 3:+68883396 | None:intergenic |
| GCATCATCAACAATTACAAC+AGG | 0.495081 | 3:-68883505 | MsG0380015349.01.T01:CDS |
| ACCACCTTGTTCATCTTCCA+AGG | 0.497250 | 3:+68883629 | None:intergenic |
| TTTGGAGGCAAATTATACAT+AGG | 0.498673 | 3:+68883474 | None:intergenic |
| GAAATGCAAGTTCAACAATC+TGG | 0.502411 | 3:-68883594 | MsG0380015349.01.T01:CDS |
| TTCAGATGTTCAAGTGATGA+TGG | 0.505534 | 3:+68884239 | None:intergenic |
| GATTCTTTGGTTATAACAAT+GGG | 0.518538 | 3:+68884026 | None:intergenic |
| GGATTCTTTGGTTATAACAA+TGG | 0.520979 | 3:+68884025 | None:intergenic |
| TACTTATGAGAGGTTGCCCT+TGG | 0.521945 | 3:-68883646 | MsG0380015349.01.T01:CDS |
| TGGGCTGGAAATGTGGCTAT+GGG | 0.522347 | 3:-68884287 | MsG0380015349.01.T01:CDS |
| CCGCCGTCACCGTGGTGTGT+CGG | 0.526432 | 3:-68883925 | MsG0380015349.01.T01:CDS |
| GTAGCTCCAGCCGGAGAAGG+CGG | 0.528688 | 3:+68883783 | None:intergenic |
| CCAGTAGCTCCAGCCGGAGA+AGG | 0.532784 | 3:+68883780 | None:intergenic |
| CACTGCTGATTTCCAAGACA+TGG | 0.534335 | 3:+68883985 | None:intergenic |
| GAACAAAACCCATCTGAGCC+AGG | 0.536402 | 3:-68884110 | MsG0380015349.01.T01:CDS |
| AGGCCACGTGGGAGACCACC+AGG | 0.537133 | 3:-68884071 | MsG0380015349.01.T01:CDS |
| GCTCCAGCCGGAGAAGGCGG+AGG | 0.543492 | 3:+68883786 | None:intergenic |
| TTAACTGTTTATTTAGCTGG+TGG | 0.548179 | 3:-68883756 | MsG0380015349.01.T01:CDS |
| AAACCGACACACCACGGTGA+CGG | 0.553487 | 3:+68883922 | None:intergenic |
| CCATTATGCAACAAATTTGG+AGG | 0.558327 | 3:+68883459 | None:intergenic |
| TAATGTAACCCTTAGACAGC+CGG | 0.563997 | 3:-68883877 | MsG0380015349.01.T01:CDS |
| AGATTATGGCAAATCGTTGG+TGG | 0.564432 | 3:-68884307 | None:intergenic |
| ATAACACCACCAGGAGCAGC+CGG | 0.567921 | 3:+68883858 | None:intergenic |
| TTTATTTAGCTGGTGGTCAG+GGG | 0.570136 | 3:-68883749 | MsG0380015349.01.T01:CDS |
| AGGAGCAGCCGGCTGTCTAA+GGG | 0.570747 | 3:+68883869 | None:intergenic |
| CATGGCTTCTTAGCGCGTTG+GGG | 0.572748 | 3:+68884003 | None:intergenic |
| TCAAGTGATGATGGTGATGA+AGG | 0.576683 | 3:+68884248 | None:intergenic |
| AGAAGATTATGGCAAATCGT+TGG | 0.586611 | 3:-68884310 | None:intergenic |
| TTGCTAATGCTACTTATGAG+AGG | 0.586891 | 3:-68883656 | MsG0380015349.01.T01:CDS |
| TCTTTGGTTATAACAATGGG+TGG | 0.587176 | 3:+68884029 | None:intergenic |
| CTCTTTCAGAAAGAAGGAGG+AGG | 0.588398 | 3:+68883390 | None:intergenic |
| AGCCAGGTAGCAGTGGTGGT+CGG | 0.589179 | 3:-68884094 | MsG0380015349.01.T01:CDS |
| AGTGGTGGTCGGAGGCCACG+TGG | 0.591936 | 3:-68884083 | MsG0380015349.01.T01:CDS |
| GCAAGTTCAACAATCTGGTG+TGG | 0.593311 | 3:-68883589 | MsG0380015349.01.T01:CDS |
| ATGGCTTCTTAGCGCGTTGG+GGG | 0.597936 | 3:+68884004 | None:intergenic |
| GATTATGGCAAATCGTTGGT+GGG | 0.599720 | 3:-68884306 | None:intergenic |
| TCTGAGCCAGGTAGCAGTGG+TGG | 0.601683 | 3:-68884098 | MsG0380015349.01.T01:CDS |
| CCATCTGAGCCAGGTAGCAG+TGG | 0.602057 | 3:-68884101 | MsG0380015349.01.T01:CDS |
| AGACAGCCGGCTGCTCCTGG+TGG | 0.608408 | 3:-68883864 | MsG0380015349.01.T01:CDS |
| AAAGAAGGAGGAGGACGAGG+AGG | 0.613275 | 3:+68883399 | None:intergenic |
| CCGACACACCACGGTGACGG+CGG | 0.613394 | 3:+68883925 | None:intergenic |
| CAGGTAGCAGTGGTGGTCGG+AGG | 0.616953 | 3:-68884091 | MsG0380015349.01.T01:CDS |
| GTTAATCCAGTAGCTCCAGC+CGG | 0.618525 | 3:+68883774 | None:intergenic |
| ACAAGGTGGTGGTGATCAAG+AGG | 0.619032 | 3:-68883616 | MsG0380015349.01.T01:CDS |
| CCACCTTGTTCATCTTCCAA+GGG | 0.619149 | 3:+68883630 | None:intergenic |
| GTGGTGGTCGGAGGCCACGT+GGG | 0.622577 | 3:-68884082 | MsG0380015349.01.T01:CDS |
| TCGTTGGTGGGCTGGAAATG+TGG | 0.623949 | 3:-68884294 | MsG0380015349.01.T01:CDS |
| CAGCAGTGGTAGTGATGTGG+CGG | 0.628263 | 3:-68883970 | MsG0380015349.01.T01:CDS |
| CACTCAAAACCGACACACCA+CGG | 0.631096 | 3:+68883916 | None:intergenic |
| TAACTCTTTCAGAAAGAAGG+AGG | 0.635542 | 3:+68883387 | None:intergenic |
| TTTGCTAACCGCCGTCACCG+TGG | 0.638394 | 3:-68883933 | MsG0380015349.01.T01:CDS |
| GGACCCCAAAACACATCATG+AGG | 0.638475 | 3:+68883426 | None:intergenic |
| TTGGAAGATGAACAAGGTGG+TGG | 0.639490 | 3:-68883627 | MsG0380015349.01.T01:CDS |
| GATCCTGGTGGTCTCCCACG+TGG | 0.640272 | 3:+68884068 | None:intergenic |
| TTGCCCTTGGAAGATGAACA+AGG | 0.667444 | 3:-68883633 | MsG0380015349.01.T01:CDS |
| TGAAGAGTAATAACACCACC+AGG | 0.674054 | 3:+68883849 | None:intergenic |
| CATGTCTTGGAAATCAGCAG+TGG | 0.685401 | 3:-68883984 | MsG0380015349.01.T01:CDS |
| ACAGGTCCAGAAGCAACCAA+AGG | 0.692630 | 3:+68883699 | None:intergenic |
| AATCAGCAGTGGTAGTGATG+TGG | 0.709338 | 3:-68883973 | MsG0380015349.01.T01:CDS |
| CCCTTGGAAGATGAACAAGG+TGG | 0.848232 | 3:-68883630 | MsG0380015349.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GATTCTTTGGTTATAACAAT+GGG | + | Chr3:68883674-68883693 | None:intergenic | 25.0% |
| GGATTAACTGTTTATTTAGC+TGG | - | Chr3:68883938-68883957 | MsG0380015349.01.T01:CDS | 30.0% | |
| GGATTCTTTGGTTATAACAA+TGG | + | Chr3:68883675-68883694 | None:intergenic | 30.0% | |
| GTACCATTATGCAACAAATT+TGG | + | Chr3:68884244-68884263 | None:intergenic | 30.0% | |
| TTAACTGTTTATTTAGCTGG+TGG | - | Chr3:68883941-68883960 | MsG0380015349.01.T01:CDS | 30.0% | |
| TTTGGAGGCAAATTATACAT+AGG | + | Chr3:68884226-68884245 | None:intergenic | 30.0% | |
| ATTCGAGATACTTTCGCTTT+CGG | - | Chr3:68883877-68883896 | MsG0380015349.01.T01:CDS | 35.0% | |
| CCATTATGCAACAAATTTGG+AGG | + | Chr3:68884241-68884260 | None:intergenic | 35.0% | |
| GAAATGCAAGTTCAACAATC+TGG | - | Chr3:68884103-68884122 | MsG0380015349.01.T01:CDS | 35.0% | |
| GCATCATCAACAATTACAAC+AGG | - | Chr3:68884192-68884211 | MsG0380015349.01.T01:CDS | 35.0% | |
| GTTATAACAATGGGTGGTTT+GGG | + | Chr3:68883665-68883684 | None:intergenic | 35.0% | |
| TCTTTGGTTATAACAATGGG+TGG | + | Chr3:68883671-68883690 | None:intergenic | 35.0% | |
| TTCAGATGTTCAAGTGATGA+TGG | + | Chr3:68883461-68883480 | None:intergenic | 35.0% | |
| ! | AAATGCCTCATGATGTGTTT+TGG | - | Chr3:68884266-68884285 | MsG0380015349.01.T01:CDS | 35.0% |
| ! | AATGCCTCATGATGTGTTTT+GGG | - | Chr3:68884267-68884286 | MsG0380015349.01.T01:CDS | 35.0% |
| ! | TCTTCTCAAGGTTTGGAATT+GGG | - | Chr3:68884166-68884185 | MsG0380015349.01.T01:CDS | 35.0% |
| ! | TTCTTCTCAAGGTTTGGAAT+TGG | - | Chr3:68884165-68884184 | MsG0380015349.01.T01:CDS | 35.0% |
| ! | TTGCTAATGCTACTTATGAG+AGG | - | Chr3:68884041-68884060 | MsG0380015349.01.T01:CDS | 35.0% |
| !! | CCTCCAAATTTGTTGCATAA+TGG | - | Chr3:68884238-68884257 | MsG0380015349.01.T01:CDS | 35.0% |
| CAACAACAACAACAACGAAG+AGG | - | Chr3:68883547-68883566 | MsG0380015349.01.T01:CDS | 40.0% | |
| GAAAAGAGAGCAAGAGTTGA+TGG | - | Chr3:68883478-68883497 | MsG0380015349.01.T01:CDS | 40.0% | |
| GGTTATAACAATGGGTGGTT+TGG | + | Chr3:68883666-68883685 | None:intergenic | 40.0% | |
| GTAGCAGCAATAACCATAAC+AGG | + | Chr3:68884019-68884038 | None:intergenic | 40.0% | |
| GTTTATTTAGCTGGTGGTCA+GGG | - | Chr3:68883947-68883966 | MsG0380015349.01.T01:CDS | 40.0% | |
| TAATGTAACCCTTAGACAGC+CGG | - | Chr3:68883820-68883839 | MsG0380015349.01.T01:CDS | 40.0% | |
| TAGCTCTTCTTCTCAAGGTT+TGG | - | Chr3:68884159-68884178 | MsG0380015349.01.T01:CDS | 40.0% | |
| TGAAGAGTAATAACACCACC+AGG | + | Chr3:68883851-68883870 | None:intergenic | 40.0% | |
| TGTTTATTTAGCTGGTGGTC+AGG | - | Chr3:68883946-68883965 | MsG0380015349.01.T01:CDS | 40.0% | |
| TTCGAGATACTTTCGCTTTC+GGG | - | Chr3:68883878-68883897 | MsG0380015349.01.T01:CDS | 40.0% | |
| TTTATTTAGCTGGTGGTCAG+GGG | - | Chr3:68883948-68883967 | MsG0380015349.01.T01:CDS | 40.0% | |
| ! | ATGCCTCATGATGTGTTTTG+GGG | - | Chr3:68884268-68884287 | MsG0380015349.01.T01:CDS | 40.0% |
| ! | GTTACTAGCTCTTCTTCTCA+AGG | - | Chr3:68884154-68884173 | MsG0380015349.01.T01:CDS | 40.0% |
| !! | GGTGGTGTTATTACTCTTCA+TGG | - | Chr3:68883851-68883870 | MsG0380015349.01.T01:CDS | 40.0% |
| !! | TCAAGTGATGATGGTGATGA+AGG | + | Chr3:68883452-68883471 | None:intergenic | 40.0% |
| !!! | TTGGGTTTGTTTTTGGATCC+TGG | + | Chr3:68883647-68883666 | None:intergenic | 40.0% |
| ACCACCTTGTTCATCTTCCA+AGG | + | Chr3:68884071-68884090 | None:intergenic | 45.0% | |
| CATGTCTTGGAAATCAGCAG+TGG | - | Chr3:68883713-68883732 | MsG0380015349.01.T01:CDS | 45.0% | |
| CCACCTTGTTCATCTTCCAA+GGG | + | Chr3:68884070-68884089 | None:intergenic | 45.0% | |
| GCAAGTTCAACAATCTGGTG+TGG | - | Chr3:68884108-68884127 | MsG0380015349.01.T01:CDS | 45.0% | |
| TACTTATGAGAGGTTGCCCT+TGG | - | Chr3:68884051-68884070 | MsG0380015349.01.T01:CDS | 45.0% | |
| TTGCCCTTGGAAGATGAACA+AGG | - | Chr3:68884064-68884083 | MsG0380015349.01.T01:CDS | 45.0% | |
| TTGGAAGATGAACAAGGTGG+TGG | - | Chr3:68884070-68884089 | MsG0380015349.01.T01:CDS | 45.0% | |
| ! | AATCAGCAGTGGTAGTGATG+TGG | - | Chr3:68883724-68883743 | MsG0380015349.01.T01:CDS | 45.0% |
| ! | TTGCTGTTGCTGCTGTTTGT+TGG | + | Chr3:68883530-68883549 | None:intergenic | 45.0% |
| !! | CACTGCTGATTTCCAAGACA+TGG | + | Chr3:68883715-68883734 | None:intergenic | 45.0% |
| !! | GGGTGGTTTGGGTTTGTTTT+TGG | + | Chr3:68883654-68883673 | None:intergenic | 45.0% |
| !!! | GGTTTGTTTTTGGATCCTGG+TGG | + | Chr3:68883644-68883663 | None:intergenic | 45.0% |
| ACAGGTCCAGAAGCAACCAA+AGG | + | Chr3:68884001-68884020 | None:intergenic | 50.0% | |
| ACATGGCTTCTTAGCGCGTT+GGG | + | Chr3:68883698-68883717 | None:intergenic | 50.0% | |
| CACTCAAAACCGACACACCA+CGG | + | Chr3:68883784-68883803 | None:intergenic | 50.0% | |
| CCCTTGGAAGATGAACAAGG+TGG | - | Chr3:68884067-68884086 | MsG0380015349.01.T01:CDS | 50.0% | |
| GAACAAAACCCATCTGAGCC+AGG | - | Chr3:68883587-68883606 | MsG0380015349.01.T01:CDS | 50.0% | |
| GGACCCCAAAACACATCATG+AGG | + | Chr3:68884274-68884293 | None:intergenic | 50.0% | |
| GGTTGCTTCTGGACCTGTTA+TGG | - | Chr3:68884003-68884022 | MsG0380015349.01.T01:CDS | 50.0% | |
| GTTAATCCAGTAGCTCCAGC+CGG | + | Chr3:68883926-68883945 | None:intergenic | 50.0% | |
| ! | ACAAGGTGGTGGTGATCAAG+AGG | - | Chr3:68884081-68884100 | MsG0380015349.01.T01:CDS | 50.0% |
| ! | TGGGCTGGAAATGTGGCTAT+GGG | - | Chr3:68883410-68883429 | MsG0380015349.01.T01:CDS | 50.0% |
| ! | TGGTTCTGTTGCAGGTCCTT+TGG | - | Chr3:68883982-68884001 | MsG0380015349.01.T01:CDS | 50.0% |
| ! | TTTTCTACCTCCGCCTTCTC+CGG | - | Chr3:68883904-68883923 | MsG0380015349.01.T01:CDS | 50.0% |
| !! | GTTGTTGGTGGTTCTGTTGC+AGG | - | Chr3:68883974-68883993 | MsG0380015349.01.T01:CDS | 50.0% |
| !!! | GTGGTGTGTCGGTTTTGAGT+GGG | - | Chr3:68883783-68883802 | MsG0380015349.01.T01:CDS | 50.0% |
| AAACCGACACACCACGGTGA+CGG | + | Chr3:68883778-68883797 | None:intergenic | 55.0% | |
| AAAGAAGGAGGAGGACGAGG+AGG | + | Chr3:68884301-68884320 | None:intergenic | 55.0% | |
| ATAACACCACCAGGAGCAGC+CGG | + | Chr3:68883842-68883861 | None:intergenic | 55.0% | |
| ATGGCTTCTTAGCGCGTTGG+GGG | + | Chr3:68883696-68883715 | None:intergenic | 55.0% | |
| CACTGCTACCTGGCTCAGAT+GGG | + | Chr3:68883598-68883617 | None:intergenic | 55.0% | |
| CAGAAAGAAGGAGGAGGACG+AGG | + | Chr3:68884304-68884323 | None:intergenic | 55.0% | |
| CATGGCTTCTTAGCGCGTTG+GGG | + | Chr3:68883697-68883716 | None:intergenic | 55.0% | |
| CGCGCTAAGAAGCCATGTCT+TGG | - | Chr3:68883700-68883719 | MsG0380015349.01.T01:CDS | 55.0% | |
| GACATGGCTTCTTAGCGCGT+TGG | + | Chr3:68883699-68883718 | None:intergenic | 55.0% | |
| GCAGGTCCTTTGGTTGCTTC+TGG | - | Chr3:68883992-68884011 | MsG0380015349.01.T01:CDS | 55.0% | |
| GTGACGGCGGTTAGCAAAGT+TGG | + | Chr3:68883762-68883781 | None:intergenic | 55.0% | |
| TAGCGCGTTGGGGGATTCTT+TGG | + | Chr3:68883687-68883706 | None:intergenic | 55.0% | |
| ! | ATGGCAAATCGTTGGTGGGC+TGG | - | Chr3:68883395-68883414 | MsG0380015349.01.T01:CDS | 55.0% |
| ! | CAGCAGTGGTAGTGATGTGG+CGG | - | Chr3:68883727-68883746 | MsG0380015349.01.T01:CDS | 55.0% |
| !! | GTGGGCTGGAAATGTGGCTA+TGG | - | Chr3:68883409-68883428 | MsG0380015349.01.T01:CDS | 55.0% |
| !! | TCGTTGGTGGGCTGGAAATG+TGG | - | Chr3:68883403-68883422 | MsG0380015349.01.T01:CDS | 55.0% |
| !!! | CGTGGTGTGTCGGTTTTGAG+TGG | - | Chr3:68883782-68883801 | MsG0380015349.01.T01:CDS | 55.0% |
| !!! | GTGTCGGTTTTGAGTGGGAG+CGG | - | Chr3:68883788-68883807 | MsG0380015349.01.T01:CDS | 55.0% |
| AGCCAGGTAGCAGTGGTGGT+CGG | - | Chr3:68883603-68883622 | MsG0380015349.01.T01:CDS | 60.0% | |
| AGGAGCAGCCGGCTGTCTAA+GGG | + | Chr3:68883831-68883850 | None:intergenic | 60.0% | |
| CCACTGCTACCTGGCTCAGA+TGG | + | Chr3:68883599-68883618 | None:intergenic | 60.0% | |
| CCATCTGAGCCAGGTAGCAG+TGG | - | Chr3:68883596-68883615 | MsG0380015349.01.T01:CDS | 60.0% | |
| TCTGAGCCAGGTAGCAGTGG+TGG | - | Chr3:68883599-68883618 | MsG0380015349.01.T01:CDS | 60.0% | |
| TTTAGCTGGTGGTCAGGGGC+AGG | - | Chr3:68883952-68883971 | MsG0380015349.01.T01:CDS | 60.0% | |
| TTTGCTAACCGCCGTCACCG+TGG | - | Chr3:68883764-68883783 | MsG0380015349.01.T01:CDS | 60.0% | |
| CAGGAGCAGCCGGCTGTCTA+AGG | + | Chr3:68883832-68883851 | None:intergenic | 65.0% | |
| CAGGTAGCAGTGGTGGTCGG+AGG | - | Chr3:68883606-68883625 | MsG0380015349.01.T01:CDS | 65.0% | |
| CCAGTAGCTCCAGCCGGAGA+AGG | + | Chr3:68883920-68883939 | None:intergenic | 65.0% | |
| CCTTCTCCGGCTGGAGCTAC+TGG | - | Chr3:68883917-68883936 | MsG0380015349.01.T01:CDS | 65.0% | |
| CTCCGACCACCACTGCTACC+TGG | + | Chr3:68883608-68883627 | None:intergenic | 65.0% | |
| CTTAGACAGCCGGCTGCTCC+TGG | - | Chr3:68883830-68883849 | MsG0380015349.01.T01:CDS | 65.0% | |
| GAAGGAGGAGGACGAGGAGG+TGG | + | Chr3:68884298-68884317 | None:intergenic | 65.0% | |
| GATCCTGGTGGTCTCCCACG+TGG | + | Chr3:68883632-68883651 | None:intergenic | 65.0% | |
| GGTCAGGGGCAGGTTGTTGG+TGG | - | Chr3:68883962-68883981 | MsG0380015349.01.T01:CDS | 65.0% | |
| GGTGGTCAGGGGCAGGTTGT+TGG | - | Chr3:68883959-68883978 | MsG0380015349.01.T01:CDS | 65.0% | |
| GTAGCTCCAGCCGGAGAAGG+CGG | + | Chr3:68883917-68883936 | None:intergenic | 65.0% | |
| AGACAGCCGGCTGCTCCTGG+TGG | - | Chr3:68883833-68883852 | MsG0380015349.01.T01:CDS | 70.0% | |
| AGGCCACGTGGGAGACCACC+AGG | - | Chr3:68883626-68883645 | MsG0380015349.01.T01:CDS | 70.0% | |
| AGTGGTGGTCGGAGGCCACG+TGG | - | Chr3:68883614-68883633 | MsG0380015349.01.T01:CDS | 70.0% | |
| CCGCCGTCACCGTGGTGTGT+CGG | - | Chr3:68883772-68883791 | MsG0380015349.01.T01:CDS | 70.0% | |
| CTACCTCCGCCTTCTCCGGC+TGG | - | Chr3:68883908-68883927 | MsG0380015349.01.T01:CDS | 70.0% | |
| GGAGGAGGACGAGGAGGTGG+AGG | + | Chr3:68884295-68884314 | None:intergenic | 70.0% | |
| GTGGTGGTCGGAGGCCACGT+GGG | - | Chr3:68883615-68883634 | MsG0380015349.01.T01:CDS | 70.0% | |
| ! | CCGACACACCACGGTGACGG+CGG | + | Chr3:68883775-68883794 | None:intergenic | 70.0% |
| GCTCCAGCCGGAGAAGGCGG+AGG | + | Chr3:68883914-68883933 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 68883395 | 68884324 | 68883395 | ID=MsG0380015349.01;Name=MsG0380015349.01 |
| Chr3 | mRNA | 68883395 | 68884324 | 68883395 | ID=MsG0380015349.01.T01;Parent=MsG0380015349.01;Name=MsG0380015349.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|309 |
| Chr3 | exon | 68883395 | 68884324 | 68883395 | ID=MsG0380015349.01.T01:exon:281;Parent=MsG0380015349.01.T01 |
| Chr3 | CDS | 68883395 | 68884324 | 68883395 | ID=MsG0380015349.01.T01:cds;Parent=MsG0380015349.01.T01 |
| Gene Sequence |
| Protein sequence |
