AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047727.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047727.01.T01 MTR_4g133870 86.480 392 13 1 1 392 1 352 0.0 666
MsG0880047727.01.T01 MTR_5g095650 51.163 387 145 3 1 387 1 343 1.22e-118 348
MsG0880047727.01.T01 MTR_7g110600 32.132 333 182 4 55 383 81 373 5.10e-56 189
MsG0880047727.01.T01 MTR_4g094582 31.861 317 168 6 76 387 140 413 9.58e-53 181
MsG0880047727.01.T01 MTR_5g091565 33.125 320 168 4 72 387 102 379 3.44e-50 173
MsG0880047727.01.T01 MTR_3g098440 90.000 40 4 0 305 344 9 48 6.43e-19 80.9
MsG0880047727.01.T01 MTR_4g133820 84.615 39 6 0 122 160 71 109 3.64e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047727.01.T01 AT5G55630 49.254 335 130 2 53 387 58 352 1.12e-103 311
MsG0880047727.01.T01 AT5G55630 49.254 335 130 2 53 387 58 352 1.12e-103 311
MsG0880047727.01.T01 AT4G01840 31.595 326 173 4 72 387 118 403 7.55e-49 171
MsG0880047727.01.T01 AT4G18160 32.500 320 171 4 72 387 151 429 1.72e-48 170
MsG0880047727.01.T01 AT5G46370 31.562 320 166 6 78 387 153 429 8.89e-48 169
MsG0880047727.01.T01 AT1G02510 35.484 217 140 0 53 269 17 233 5.61e-39 141
MsG0880047727.01.T01 AT5G46360 30.583 206 102 2 183 387 89 254 1.19e-22 96.7
MsG0880047727.01.T01 AT5G46360 29.670 182 87 2 183 363 89 230 7.47e-18 83.2

Find 91 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCCGTCCCCGACGGGTTT+GGG 0.284761 8:-90059361 None:intergenic
ATCCCCGTCCCCGACGGGTT+TGG 0.293110 8:-90059362 None:intergenic
GTTATACATTGTGGGGATAA+AGG 0.297615 8:-90058030 None:intergenic
TGTTCCACGGTCACTACTTT+AGG 0.301171 8:+90058543 MsG0880047727.01.T01:CDS
TCAATGCGGGGACGGGGATG+GGG 0.305424 8:+90059330 MsG0880047727.01.T01:CDS
GAAATTTGAACAACCTTATC+AGG 0.305862 8:+90056623 MsG0880047727.01.T01:five_prime_UTR
ATGTGCAAGGCTGAAAATTT+TGG 0.309852 8:+90058369 MsG0880047727.01.T01:CDS
TGTATACAAGTTGAAGGAAA+TGG 0.323817 8:+90059924 MsG0880047727.01.T01:CDS
TTATACATTGTGGGGATAAA+GGG 0.332006 8:-90058029 None:intergenic
ATGCGGGGACGGGGATGGGG+CGG 0.335890 8:+90059333 MsG0880047727.01.T01:CDS
CGGTCACTACTTTAGGTTAT+GGG 0.344172 8:+90058550 MsG0880047727.01.T01:CDS
TCACTGCTGAAATATCTTCT+TGG 0.344460 8:-90059957 None:intergenic
TTGTCACAACACAGAAATAA+AGG 0.357592 8:-90058188 None:intergenic
TTCAATGCGGGGACGGGGAT+GGG 0.357708 8:+90059329 MsG0880047727.01.T01:CDS
TGTCGTGGTGGACTAGGAAT+AGG 0.358743 8:-90056425 None:intergenic
GCGGGGACGGGGATGGGGCG+GGG 0.367690 8:+90059335 MsG0880047727.01.T01:CDS
TACCCAAACCCGTCGGGGAC+GGG 0.384163 8:+90059359 MsG0880047727.01.T01:CDS
ACTAGTAAAATCTGAGTCAT+TGG 0.385151 8:+90056400 MsG0880047727.01.T01:five_prime_UTR
AGATTACATTGTTGAGAAAC+AGG 0.387285 8:+90058326 MsG0880047727.01.T01:CDS
ACGGTCACTACTTTAGGTTA+TGG 0.387375 8:+90058549 MsG0880047727.01.T01:CDS
AAATTATTCAATGCGGGGAC+GGG 0.410784 8:+90059323 MsG0880047727.01.T01:CDS
TTCAATTTCTCATCCCCGTT+GGG 0.414248 8:+90059389 MsG0880047727.01.T01:CDS
GTATACAAGTTGAAGGAAAT+GGG 0.421596 8:+90059925 MsG0880047727.01.T01:CDS
CGGGGATACCCAAACCCGTC+GGG 0.422315 8:+90059353 MsG0880047727.01.T01:CDS
ACCCAAACCCGTCGGGGACG+GGG 0.422722 8:+90059360 MsG0880047727.01.T01:CDS
CTTGAGGCAGCAGATCTTGA+TGG 0.425392 8:+90058741 MsG0880047727.01.T01:CDS
TGCGGGGACGGGGATGGGGC+GGG 0.431545 8:+90059334 MsG0880047727.01.T01:CDS
GTTTATCAGTTATACATTGT+GGG 0.433811 8:-90058038 None:intergenic
GTCTTCACTGGCATGGCTCT+CGG 0.434853 8:+90058279 MsG0880047727.01.T01:CDS
ACAATGACTACTGTTGGATA+TGG 0.435922 8:+90058207 MsG0880047727.01.T01:CDS
GTTTGTTGTATACAAGTTGA+AGG 0.439684 8:+90059918 MsG0880047727.01.T01:CDS
GCATGCATTTATGTCTTCAC+TGG 0.440926 8:+90058267 MsG0880047727.01.T01:CDS
ATTGTGGGGATAAAGGGGTT+TGG 0.445503 8:-90058023 None:intergenic
GTTGAAGTTCTAAGATGCTT+AGG 0.446526 8:-90057808 None:intergenic
ATTCAATGCGGGGACGGGGA+TGG 0.453527 8:+90059328 MsG0880047727.01.T01:CDS
AGCATTAGTAAATAAGTTGA+TGG 0.453687 8:+90057849 MsG0880047727.01.T01:exon
ATACCCTACCCATACCCAAC+GGG 0.454653 8:-90059403 None:intergenic
GAAGAAGAAGTTGTCGATTG+AGG 0.454673 8:-90056551 None:intergenic
TCTAACAAGTTACCAAATTG+AGG 0.463818 8:+90058137 MsG0880047727.01.T01:CDS
TGTTTATCAGTTATACATTG+TGG 0.465559 8:-90058039 None:intergenic
ACGATTGGATATACCTGATA+AGG 0.467074 8:-90056636 None:intergenic
ATACCCAAACCCGTCGGGGA+CGG 0.480283 8:+90059358 MsG0880047727.01.T01:CDS
TGTCACAACACAGAAATAAA+GGG 0.481987 8:-90058187 None:intergenic
AATTCATGATGTGTATAGTA+AGG 0.483946 8:-90060076 None:intergenic
GAATGTCCATTTGGAAGCAT+CGG 0.489194 8:+90056489 MsG0880047727.01.T01:five_prime_UTR
ATTGAGCAGCACCATTTGCT+TGG 0.490697 8:+90058623 MsG0880047727.01.T01:CDS
AGCTATTGCTTTCAGAGTCA+AGG 0.495133 8:+90057890 MsG0880047727.01.T01:CDS
ATCTCATCCCCGTCCCCGAC+GGG 0.500934 8:-90059367 None:intergenic
AAACTAGACTGTGATCAATC+AGG 0.508619 8:+90059994 MsG0880047727.01.T01:CDS
CATTTATGTCTTCACTGGCA+TGG 0.510032 8:+90058272 MsG0880047727.01.T01:CDS
AATTATTCAATGCGGGGACG+GGG 0.510709 8:+90059324 MsG0880047727.01.T01:CDS
ATGTCTCCGATGCTTCCAAA+TGG 0.517766 8:-90056495 None:intergenic
AGAAGATATTTCAGCAGTGA+TGG 0.521751 8:+90059960 MsG0880047727.01.T01:CDS
AAGAGCTTCTCGACTGCTGC+CGG 0.529816 8:+90058576 MsG0880047727.01.T01:CDS
CTAACAAGTTACCAAATTGA+GGG 0.530492 8:+90058138 MsG0880047727.01.T01:CDS
AAGAAGCAGAATTCAAGTTC+AGG 0.531566 8:+90058061 MsG0880047727.01.T01:CDS
AAAATTATTCAATGCGGGGA+CGG 0.532670 8:+90059322 MsG0880047727.01.T01:CDS
AAAAGACTGAGCCAAGCAAA+TGG 0.534462 8:-90058634 None:intergenic
AATCTCATCCCCGTCCCCGA+CGG 0.535690 8:-90059368 None:intergenic
GCGGTCTTCTTCTCTGAAGA+AGG 0.536019 8:-90057942 None:intergenic
TTTATCAGTTATACATTGTG+GGG 0.538243 8:-90058037 None:intergenic
ACTCTATTGTGTTTGTTCCA+CGG 0.539533 8:+90058530 MsG0880047727.01.T01:CDS
ATTCAATTTCTCATCCCCGT+TGG 0.544566 8:+90059388 MsG0880047727.01.T01:CDS
TAAGGCAGATGATGTTAAGA+TGG 0.546031 8:-90060058 None:intergenic
TTGATGGAGACAAAGTTGTC+AGG 0.546814 8:+90058757 MsG0880047727.01.T01:CDS
GTGGGGATAAAGGGGTTTGG+AGG 0.551813 8:-90058020 None:intergenic
GCTATTGCTTTCAGAGTCAA+GGG 0.570375 8:+90057891 MsG0880047727.01.T01:CDS
TCTTGCTGAGTCCATGTGCA+AGG 0.575638 8:+90058356 MsG0880047727.01.T01:CDS
ACTTGTTAGATAGAAACATA+AGG 0.578014 8:-90058124 None:intergenic
ATTATCACTAAGTGATCTTG+AGG 0.579141 8:+90058725 MsG0880047727.01.T01:CDS
GCGGGGATACCCAAACCCGT+CGG 0.585875 8:+90059352 MsG0880047727.01.T01:CDS
TATACATTGTGGGGATAAAG+GGG 0.588776 8:-90058028 None:intergenic
TGAAGACATAAATGCATGCA+AGG 0.589047 8:-90058263 None:intergenic
TTGTGTTTAGCAGCATACCT+AGG 0.589326 8:+90058093 MsG0880047727.01.T01:CDS
GTTGTGACAATGACTACTGT+TGG 0.595895 8:+90058201 MsG0880047727.01.T01:CDS
GGTCACTACTTTAGGTTATG+GGG 0.598779 8:+90058551 MsG0880047727.01.T01:CDS
TGAAGATAGACAAAGATCAC+TGG 0.601013 8:+90058680 MsG0880047727.01.T01:CDS
GCATTAGTAAATAAGTTGAT+GGG 0.601074 8:+90057850 MsG0880047727.01.T01:exon
AACATAAGGTACCTGTGCCT+AGG 0.617422 8:-90058110 None:intergenic
AGAAGAAGACCGCGGCGTGG+CGG 0.622978 8:+90057952 MsG0880047727.01.T01:CDS
GGGGATACCCAAACCCGTCG+GGG 0.624230 8:+90059354 MsG0880047727.01.T01:CDS
GCTTCTCGACTGCTGCCGGT+AGG 0.626037 8:+90058580 MsG0880047727.01.T01:CDS
TTAGCAGCATACCTAGGCAC+AGG 0.645513 8:+90058099 MsG0880047727.01.T01:CDS
TTCACTGGCATGGCTCTCGG+TGG 0.647484 8:+90058282 MsG0880047727.01.T01:CDS
TCTGAAGTTCCGCCACGCCG+CGG 0.651177 8:-90057961 None:intergenic
AATCTGCAGCAAGAACAGAA+TGG 0.667031 8:+90057994 MsG0880047727.01.T01:CDS
CAGAGAAGAAGACCGCGGCG+TGG 0.691942 8:+90057949 MsG0880047727.01.T01:CDS
GCTGCTCAATATCCAAAACA+CGG 0.699934 8:-90058610 None:intergenic
ATAACCTAAAGTAGTGACCG+TGG 0.717695 8:-90058547 None:intergenic
TACCCTACCCATACCCAACG+GGG 0.726638 8:-90059402 None:intergenic
TTCTTCAGAGAAGAAGACCG+CGG 0.758085 8:+90057944 MsG0880047727.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAATAAAATAAAA+TGG + Chr8:90059544-90059563 MsG0880047727.01.T01:intron 0.0%
!!! ATTTTTTAATTATTTTTTTT+TGG + Chr8:90059655-90059674 MsG0880047727.01.T01:intron 0.0%
!! ATAAAATGGAAATTAAAATA+AGG + Chr8:90059558-90059577 MsG0880047727.01.T01:intron 10.0%
!! ATTAAAAAAATTATTCAATG+CGG + Chr8:90059316-90059335 MsG0880047727.01.T01:CDS 10.0%
!!! ATAAAGTAATATTTTACATT+TGG - Chr8:90059127-90059146 None:intergenic 10.0%
!!! TAAAGTAATATTTTACATTT+GGG - Chr8:90059126-90059145 None:intergenic 10.0%
!! AAATATAGAGTAATAGTTAT+AGG - Chr8:90056749-90056768 None:intergenic 15.0%
!! AACATTACAAAAAAAAACTA+AGG + Chr8:90057537-90057556 MsG0880047727.01.T01:intron 15.0%
!! AACATTGAATTGAAATTTAA+TGG + Chr8:90056803-90056822 MsG0880047727.01.T01:intron 15.0%
!! ACATAAGCATTTATATAATA+AGG + Chr8:90057757-90057776 MsG0880047727.01.T01:intron 15.0%
!! ACATTACAAAAAAAAACTAA+GGG + Chr8:90057538-90057557 MsG0880047727.01.T01:intron 15.0%
!! CATAAGCATTTATATAATAA+GGG + Chr8:90057758-90057777 MsG0880047727.01.T01:intron 15.0%
!! TTAAAAAAATTATTCAATGC+GGG + Chr8:90059317-90059336 MsG0880047727.01.T01:CDS 15.0%
!!! AAGTTTATACTTTTAATGAA+TGG + Chr8:90060177-90060196 MsG0880047727.01.T01:three_prime_UTR 15.0%
!!! AATCAATCTTAAACATTTTA+AGG + Chr8:90056460-90056479 MsG0880047727.01.T01:five_prime_UTR 15.0%
!!! TAGTTTTTTTTTGTAATGTT+CGG - Chr8:90057537-90057556 None:intergenic 15.0%
!! AAAATTGTTGATCAATATTG+AGG - Chr8:90059882-90059901 None:intergenic 20.0%
!! ATGGTAATTGTAATTGTTAA+TGG + Chr8:90056822-90056841 MsG0880047727.01.T01:intron 20.0%
!! TAAAAAAATTATTCAATGCG+GGG + Chr8:90059318-90059337 MsG0880047727.01.T01:CDS 20.0%
!! TTATGAGTGAATTTGTAAAT+TGG - Chr8:90058899-90058918 None:intergenic 20.0%
!! TTTATTTATATCATTTGCAC+CGG + Chr8:90059765-90059784 MsG0880047727.01.T01:intron 20.0%
!!! ATATCGATTGAAATCTTAAA+AGG - Chr8:90056686-90056705 None:intergenic 20.0%
!!! ATTTATTTGAGTTTAGTTAC+CGG + Chr8:90057329-90057348 MsG0880047727.01.T01:intron 20.0%
! AAAAGATTTAACATCTTGAG+AGG - Chr8:90057130-90057149 None:intergenic 25.0%
! AAACTACCTTTGATACTTAA+AGG + Chr8:90059192-90059211 MsG0880047727.01.T01:intron 25.0%
! AATTCATGATGTGTATAGTA+AGG - Chr8:90060079-90060098 None:intergenic 25.0%
! GTTTATCAGTTATACATTGT+GGG - Chr8:90058041-90058060 None:intergenic 25.0%
! TGTTTATCAGTTATACATTG+TGG - Chr8:90058042-90058061 None:intergenic 25.0%
! TTATTTATATCATTTGCACC+GGG + Chr8:90059766-90059785 MsG0880047727.01.T01:intron 25.0%
! TTTATCAGTTATACATTGTG+GGG - Chr8:90058040-90058059 None:intergenic 25.0%
!! ACTATTTTCATAAGTCATTG+TGG - Chr8:90057679-90057698 None:intergenic 25.0%
!! ACTTGTTAGATAGAAACATA+AGG - Chr8:90058127-90058146 None:intergenic 25.0%
!! AGCATTAGTAAATAAGTTGA+TGG + Chr8:90057849-90057868 MsG0880047727.01.T01:exon 25.0%
!! ATCACTTAGTGATAATTTTC+GGG - Chr8:90058721-90058740 None:intergenic 25.0%
!! GATCACTTAGTGATAATTTT+CGG - Chr8:90058722-90058741 None:intergenic 25.0%
!! GTAATATTTTACATTTGGGA+CGG - Chr8:90059122-90059141 None:intergenic 25.0%
!! TATTGAGAATCTAGATTTTG+TGG + Chr8:90058503-90058522 MsG0880047727.01.T01:CDS 25.0%
!!! GCATTAGTAAATAAGTTGAT+GGG + Chr8:90057850-90057869 MsG0880047727.01.T01:exon 25.0%
!!! GTATTACAATGTTGCTTTTA+GGG + Chr8:90059270-90059289 MsG0880047727.01.T01:intron 25.0%
!!! TAATATTTTACATTTGGGAC+GGG - Chr8:90059121-90059140 None:intergenic 25.0%
!!! TGTATTACAATGTTGCTTTT+AGG + Chr8:90059269-90059288 MsG0880047727.01.T01:intron 25.0%
AAAAAAACTAAGGGTTTGTC+TGG + Chr8:90057547-90057566 MsG0880047727.01.T01:intron 30.0%
AAGTAGTGTAAGAAAACGAT+TGG - Chr8:90056654-90056673 None:intergenic 30.0%
AATCATGAGCACAAAAAAAG+TGG - Chr8:90058460-90058479 None:intergenic 30.0%
AATCTCTGATTATTGCGAAT+TGG - Chr8:90058847-90058866 None:intergenic 30.0%
ACTAGTAAAATCTGAGTCAT+TGG + Chr8:90056400-90056419 MsG0880047727.01.T01:five_prime_UTR 30.0%
AGATTACATTGTTGAGAAAC+AGG + Chr8:90058326-90058345 MsG0880047727.01.T01:CDS 30.0%
ATTATCACTAAGTGATCTTG+AGG + Chr8:90058725-90058744 MsG0880047727.01.T01:CDS 30.0%
CAGAAATCATCCAGAAAAAT+AGG - Chr8:90056526-90056545 None:intergenic 30.0%
CCATTGAGTAAAATACATGT+GGG + Chr8:90057003-90057022 MsG0880047727.01.T01:intron 30.0%
CTAACAAGTTACCAAATTGA+GGG + Chr8:90058138-90058157 MsG0880047727.01.T01:CDS 30.0%
CTTATTGGATGAAATACATG+TGG - Chr8:90057069-90057088 None:intergenic 30.0%
CTTATTTACTTGAACACTTG+TGG + Chr8:90057585-90057604 MsG0880047727.01.T01:intron 30.0%
GAAATTTGAACAACCTTATC+AGG + Chr8:90056623-90056642 MsG0880047727.01.T01:five_prime_UTR 30.0%
GAGATTGAGTGTTAAAAAGT+GGG - Chr8:90056983-90057002 None:intergenic 30.0%
GCTTAGTGTAGCTAAATTAT+TGG - Chr8:90059851-90059870 None:intergenic 30.0%
GTAGATCCTTTAAGTATCAA+AGG - Chr8:90059201-90059220 None:intergenic 30.0%
TCTAACAAGTTACCAAATTG+AGG + Chr8:90058137-90058156 MsG0880047727.01.T01:CDS 30.0%
TGTCACAACACAGAAATAAA+GGG - Chr8:90058190-90058209 None:intergenic 30.0%
TTATACATTGTGGGGATAAA+GGG - Chr8:90058032-90058051 None:intergenic 30.0%
TTGTCACAACACAGAAATAA+AGG - Chr8:90058191-90058210 None:intergenic 30.0%
! AATTAGTCTGTTTATCCAAC+AGG + Chr8:90057784-90057803 MsG0880047727.01.T01:intron 30.0%
! ATTAGTCTGTTTATCCAACA+GGG + Chr8:90057785-90057804 MsG0880047727.01.T01:intron 30.0%
! CCACATGTATTTTACTCAAT+GGG - Chr8:90057005-90057024 None:intergenic 30.0%
! CTTTTCAGTGTCAATTCTTA+CGG + Chr8:90057145-90057164 MsG0880047727.01.T01:intron 30.0%
! GTATACAAGTTGAAGGAAAT+GGG + Chr8:90059925-90059944 MsG0880047727.01.T01:CDS 30.0%
! TCTTAGAACTTCAACTTTTC+AGG + Chr8:90057816-90057835 MsG0880047727.01.T01:five_prime_UTR 30.0%
! TGTATACAAGTTGAAGGAAA+TGG + Chr8:90059924-90059943 MsG0880047727.01.T01:CDS 30.0%
! TTTTCAGTGTCAATTCTTAC+GGG + Chr8:90057146-90057165 MsG0880047727.01.T01:intron 30.0%
! TTTTCCCCGATTTCAAAATA+CGG + Chr8:90059043-90059062 MsG0880047727.01.T01:intron 30.0%
!! AGTTTTGCTATAGTGCTATT+TGG - Chr8:90058243-90058262 None:intergenic 30.0%
!! GACATTATTGCCTATTTTTC+TGG + Chr8:90056513-90056532 MsG0880047727.01.T01:five_prime_UTR 30.0%
!! GTTTGTTGTATACAAGTTGA+AGG + Chr8:90059918-90059937 MsG0880047727.01.T01:CDS 30.0%
!! TCTTTTGATGACAACAACAA+TGG - Chr8:90057450-90057469 None:intergenic 30.0%
!! TGAAAATTTTGGTCTACAAG+AGG + Chr8:90058380-90058399 MsG0880047727.01.T01:CDS 30.0%
!!! AGGTTTTTAGAATGTCCATT+TGG + Chr8:90056480-90056499 MsG0880047727.01.T01:five_prime_UTR 30.0%
!!! ATTATCACACTTTTTTGTCG+TGG - Chr8:90056443-90056462 None:intergenic 30.0%
!!! TTGTTTTTATGCCCTCAATT+TGG - Chr8:90058152-90058171 None:intergenic 30.0%
AAAATTATTCAATGCGGGGA+CGG + Chr8:90059322-90059341 MsG0880047727.01.T01:CDS 35.0%
AAACTACTTATGACATGCCT+GGG + Chr8:90057389-90057408 MsG0880047727.01.T01:intron 35.0%
AAACTAGACTGTGATCAATC+AGG + Chr8:90059994-90060013 MsG0880047727.01.T01:CDS 35.0%
AATAAGAGAGTGAATGGTGT+AGG + Chr8:90057083-90057102 MsG0880047727.01.T01:intron 35.0%
ACAAAGATCACTGGCAAAAA+TGG + Chr8:90058689-90058708 MsG0880047727.01.T01:CDS 35.0%
ACAATGACTACTGTTGGATA+TGG + Chr8:90058207-90058226 MsG0880047727.01.T01:CDS 35.0%
ACGATTGGATATACCTGATA+AGG - Chr8:90056639-90056658 None:intergenic 35.0%
ACTCCTTTGATATGTATCGA+CGG + Chr8:90059680-90059699 MsG0880047727.01.T01:intron 35.0%
ACTCTATTGTGTTTGTTCCA+CGG + Chr8:90058530-90058549 MsG0880047727.01.T01:CDS 35.0%
AGAAGATATTTCAGCAGTGA+TGG + Chr8:90059960-90059979 MsG0880047727.01.T01:CDS 35.0%
ATAAGAGAGTGAATGGTGTA+GGG + Chr8:90057084-90057103 MsG0880047727.01.T01:intron 35.0%
ATCAACTAAAAACAACTCCC+AGG - Chr8:90057409-90057428 None:intergenic 35.0%
CACTCATAAGTTATGAAGCA+CGG + Chr8:90058910-90058929 MsG0880047727.01.T01:intron 35.0%
CCCATTGAGTAAAATACATG+TGG + Chr8:90057002-90057021 MsG0880047727.01.T01:intron 35.0%
CGATTTCAAAATACGGGTAT+GGG + Chr8:90059050-90059069 MsG0880047727.01.T01:intron 35.0%
CTTCTTCTTCTTCTTCTTCA+TGG + Chr8:90056585-90056604 MsG0880047727.01.T01:five_prime_UTR 35.0%
GGAGATTGAGTGTTAAAAAG+TGG - Chr8:90056984-90057003 None:intergenic 35.0%
GTGTTAAAAAGTGGGTCTTA+TGG - Chr8:90056975-90056994 None:intergenic 35.0%
GTTATACATTGTGGGGATAA+AGG - Chr8:90058033-90058052 None:intergenic 35.0%
TAAACAATCACACGTATCTG+AGG + Chr8:90059588-90059607 MsG0880047727.01.T01:intron 35.0%
TAAGGCAGATGATGTTAAGA+TGG - Chr8:90060061-90060080 None:intergenic 35.0%
TACACCATTCACTCTCTTAT+TGG - Chr8:90057084-90057103 None:intergenic 35.0%
TATACATTGTGGGGATAAAG+GGG - Chr8:90058031-90058050 None:intergenic 35.0%
TATCAGATACACGTATCGTT+AGG - Chr8:90059502-90059521 None:intergenic 35.0%
TCACTGCTGAAATATCTTCT+TGG - Chr8:90059960-90059979 None:intergenic 35.0%
TCATCCAATAAGAGAGTGAA+TGG + Chr8:90057077-90057096 MsG0880047727.01.T01:intron 35.0%
TCGGGTAAGTATATGAGAAT+CGG + Chr8:90059425-90059444 MsG0880047727.01.T01:intron 35.0%
TGAAGACATAAATGCATGCA+AGG - Chr8:90058266-90058285 None:intergenic 35.0%
TGAAGATAGACAAAGATCAC+TGG + Chr8:90058680-90058699 MsG0880047727.01.T01:CDS 35.0%
TGTTAAAGTGAGCGTATTGT+TGG + Chr8:90059242-90059261 MsG0880047727.01.T01:intron 35.0%
TTTCAGTGTCAATTCTTACG+GGG + Chr8:90057147-90057166 MsG0880047727.01.T01:intron 35.0%
TTTCCCCGATTTCAAAATAC+GGG + Chr8:90059044-90059063 MsG0880047727.01.T01:intron 35.0%
! AAAATTTTCAGCCTTGCACA+TGG - Chr8:90058370-90058389 None:intergenic 35.0%
! AAGAAGCAGAATTCAAGTTC+AGG + Chr8:90058061-90058080 MsG0880047727.01.T01:CDS 35.0%
! AATTGGTTCCCAAGACTAAT+CGG + Chr8:90057226-90057245 MsG0880047727.01.T01:intron 35.0%
! ATGTGCAAGGCTGAAAATTT+TGG + Chr8:90058369-90058388 MsG0880047727.01.T01:CDS 35.0%
! CCCACATGTATTTTACTCAA+TGG - Chr8:90057006-90057025 None:intergenic 35.0%
!! GTTGAAGTTCTAAGATGCTT+AGG - Chr8:90057811-90057830 None:intergenic 35.0%
!!! ATACCCGTATTTTGAAATCG+GGG - Chr8:90059050-90059069 None:intergenic 35.0%
!!! CATACCCGTATTTTGAAATC+GGG - Chr8:90059051-90059070 None:intergenic 35.0%
!!! CCATACCCGTATTTTGAAAT+CGG - Chr8:90059052-90059071 None:intergenic 35.0%
!!! TTTTTTCATGAAGAGCTTCG+TGG + Chr8:90056881-90056900 MsG0880047727.01.T01:intron 35.0%
!!! TTTTTTGTGCTCATGATTGC+AGG + Chr8:90058462-90058481 MsG0880047727.01.T01:CDS 35.0%
AAAACCCGTCAAATTGGGTT+TGG - Chr8:90058989-90059008 None:intergenic 40.0%
AAAAGACTGAGCCAAGCAAA+TGG - Chr8:90058637-90058656 None:intergenic 40.0%
AAACACGGCAAAAATCCTAC+CGG - Chr8:90058598-90058617 None:intergenic 40.0%
AAATTATTCAATGCGGGGAC+GGG + Chr8:90059323-90059342 MsG0880047727.01.T01:CDS 40.0%
AACTAAGGGTTTGTCTGGAT+TGG + Chr8:90057552-90057571 MsG0880047727.01.T01:intron 40.0%
AAGACTAATCGGTCCTTACT+GGG + Chr8:90057237-90057256 MsG0880047727.01.T01:intron 40.0%
AATCTGCAGCAAGAACAGAA+TGG + Chr8:90057994-90058013 MsG0880047727.01.T01:CDS 40.0%
ACTTGAACACTTGTGGTCAT+GGG + Chr8:90057592-90057611 MsG0880047727.01.T01:intron 40.0%
AGCTATTGCTTTCAGAGTCA+AGG + Chr8:90057890-90057909 MsG0880047727.01.T01:CDS 40.0%
AGGCTGTTTGAGAGAGTTTA+TGG + Chr8:90057366-90057385 MsG0880047727.01.T01:intron 40.0%
ATAACCTAAAGTAGTGACCG+TGG - Chr8:90058550-90058569 None:intergenic 40.0%
ATACCCAAACCCAGTCAAAA+CGG - Chr8:90059014-90059033 None:intergenic 40.0%
ATTCAATTTCTCATCCCCGT+TGG + Chr8:90059388-90059407 MsG0880047727.01.T01:CDS 40.0%
CATTTATGTCTTCACTGGCA+TGG + Chr8:90058272-90058291 MsG0880047727.01.T01:CDS 40.0%
CCGATTTCAAAATACGGGTA+TGG + Chr8:90059049-90059068 MsG0880047727.01.T01:intron 40.0%
CGGGTAAGTATATGAGAATC+GGG + Chr8:90059426-90059445 MsG0880047727.01.T01:intron 40.0%
GAAACTACTTATGACATGCC+TGG + Chr8:90057388-90057407 MsG0880047727.01.T01:intron 40.0%
GCATGCATTTATGTCTTCAC+TGG + Chr8:90058267-90058286 MsG0880047727.01.T01:CDS 40.0%
GCTATTGCTTTCAGAGTCAA+GGG + Chr8:90057891-90057910 MsG0880047727.01.T01:CDS 40.0%
GCTGCTCAATATCCAAAACA+CGG - Chr8:90058613-90058632 None:intergenic 40.0%
GTATATGAGAATCGGGTATG+TGG + Chr8:90059433-90059452 MsG0880047727.01.T01:intron 40.0%
GTTGTGACAATGACTACTGT+TGG + Chr8:90058201-90058220 MsG0880047727.01.T01:CDS 40.0%
TACTTGAACACTTGTGGTCA+TGG + Chr8:90057591-90057610 MsG0880047727.01.T01:intron 40.0%
TATGATCTTACTGCATCTCC+CGG - Chr8:90059787-90059806 None:intergenic 40.0%
TCAACGCAATACTAGTGATG+AGG - Chr8:90059819-90059838 None:intergenic 40.0%
TCACTCTTTCTTACCCAGTA+AGG - Chr8:90057253-90057272 None:intergenic 40.0%
TTCAAAATACGGGTATGGGA+CGG + Chr8:90059054-90059073 MsG0880047727.01.T01:intron 40.0%
TTCAATTTCTCATCCCCGTT+GGG + Chr8:90059389-90059408 MsG0880047727.01.T01:CDS 40.0%
TTGATGGAGACAAAGTTGTC+AGG + Chr8:90058757-90058776 MsG0880047727.01.T01:CDS 40.0%
TTGTGTTTAGCAGCATACCT+AGG + Chr8:90058093-90058112 MsG0880047727.01.T01:CDS 40.0%
! ACGGTCACTACTTTAGGTTA+TGG + Chr8:90058549-90058568 MsG0880047727.01.T01:CDS 40.0%
! CGGTCACTACTTTAGGTTAT+GGG + Chr8:90058550-90058569 MsG0880047727.01.T01:CDS 40.0%
! GAAGAAGAAGTTGTCGATTG+AGG - Chr8:90056554-90056573 None:intergenic 40.0%
! GAATGTCCATTTGGAAGCAT+CGG + Chr8:90056489-90056508 MsG0880047727.01.T01:five_prime_UTR 40.0%
! GGTCACTACTTTAGGTTATG+GGG + Chr8:90058551-90058570 MsG0880047727.01.T01:CDS 40.0%
! GTAGGATTTTTGCCGTGTTT+TGG + Chr8:90058598-90058617 MsG0880047727.01.T01:CDS 40.0%
! TTTACATTTGGGACGGGTTT+GGG - Chr8:90059115-90059134 None:intergenic 40.0%
!! AGTAAGGACCGATTAGTCTT+GGG - Chr8:90057237-90057256 None:intergenic 40.0%
!! TTTTACATTTGGGACGGGTT+TGG - Chr8:90059116-90059135 None:intergenic 40.0%
!! TTTTGACTGGGTTTGGGTAT+GGG + Chr8:90059014-90059033 MsG0880047727.01.T01:intron 40.0%
!!! ATCACACTTTTTTGTCGTGG+TGG - Chr8:90056440-90056459 None:intergenic 40.0%
AATTATTCAATGCGGGGACG+GGG + Chr8:90059324-90059343 MsG0880047727.01.T01:CDS 45.0%
ACAACAAACTCTGCAGCACT+GGG - Chr8:90059907-90059926 None:intergenic 45.0%
ACATGTGGGTCCCATTGTTA+CGG + Chr8:90057017-90057036 MsG0880047727.01.T01:intron 45.0%
ACGCCGTCGATACATATCAA+AGG - Chr8:90059686-90059705 None:intergenic 45.0%
ACTGGGTAAGAAAGAGTGAG+TGG + Chr8:90057254-90057273 MsG0880047727.01.T01:intron 45.0%
AGCAGACACTTCACAATTGC+AGG + Chr8:90058811-90058830 MsG0880047727.01.T01:intron 45.0%
ATGAGAATCGGGTATGTGGA+TGG + Chr8:90059437-90059456 MsG0880047727.01.T01:intron 45.0%
ATGTCTCCGATGCTTCCAAA+TGG - Chr8:90056498-90056517 None:intergenic 45.0%
ATTGAGCAGCACCATTTGCT+TGG + Chr8:90058623-90058642 MsG0880047727.01.T01:CDS 45.0%
ATTGTGGGGATAAAGGGGTT+TGG - Chr8:90058026-90058045 None:intergenic 45.0%
CAAGACTAATCGGTCCTTAC+TGG + Chr8:90057236-90057255 MsG0880047727.01.T01:intron 45.0%
CCGAACCAAACCCAATTTGA+CGG + Chr8:90058981-90059000 MsG0880047727.01.T01:intron 45.0%
CGAACCAAACCCAATTTGAC+GGG + Chr8:90058982-90059001 MsG0880047727.01.T01:intron 45.0%
GATACACGTATCGTTAGGCA+TGG - Chr8:90059497-90059516 None:intergenic 45.0%
GCAGACACTTCACAATTGCA+GGG + Chr8:90058812-90058831 MsG0880047727.01.T01:intron 45.0%
GTATCGTTAGGCATGGCAAT+GGG - Chr8:90059490-90059509 None:intergenic 45.0%
GTGGTTCAGACTTCAGAACA+TGG + Chr8:90056900-90056919 MsG0880047727.01.T01:intron 45.0%
TACAACAAACTCTGCAGCAC+TGG - Chr8:90059908-90059927 None:intergenic 45.0%
TACCCAAACCCAGTCAAAAC+GGG - Chr8:90059013-90059032 None:intergenic 45.0%
TACCGGTAAAACCACTTGTG+AGG + Chr8:90057346-90057365 MsG0880047727.01.T01:intron 45.0%
TATCGTTAGGCATGGCAATG+GGG - Chr8:90059489-90059508 None:intergenic 45.0%
TCAAAATACGGGTATGGGAC+GGG + Chr8:90059055-90059074 MsG0880047727.01.T01:intron 45.0%
TGAGAATCGGGTATGTGGAT+GGG + Chr8:90059438-90059457 MsG0880047727.01.T01:intron 45.0%
TGTTCCACGGTCACTACTTT+AGG + Chr8:90058543-90058562 MsG0880047727.01.T01:CDS 45.0%
TTAAATGTGCCCCTTGCAAG+CGG + Chr8:90057196-90057215 MsG0880047727.01.T01:intron 45.0%
TTCTTCAGAGAAGAAGACCG+CGG + Chr8:90057944-90057963 MsG0880047727.01.T01:CDS 45.0%
! AACATAAGGTACCTGTGCCT+AGG - Chr8:90058113-90058132 None:intergenic 45.0%
! CCGTCAAATTGGGTTTGGTT+CGG - Chr8:90058984-90059003 None:intergenic 45.0%
! CGTCAAATTGGGTTTGGTTC+GGG - Chr8:90058983-90059002 None:intergenic 45.0%
!! AAATTGGGTTTGGTTCGGGT+GGG - Chr8:90058979-90058998 None:intergenic 45.0%
!! AGCCTCACAAGTGGTTTTAC+CGG - Chr8:90057351-90057370 None:intergenic 45.0%
!! CAGTAAGGACCGATTAGTCT+TGG - Chr8:90057238-90057257 None:intergenic 45.0%
!!! CTTTTTTGTCGTGGTGGACT+AGG - Chr8:90056434-90056453 None:intergenic 45.0%
!!! GTTTTGACTGGGTTTGGGTA+TGG + Chr8:90059013-90059032 MsG0880047727.01.T01:intron 45.0%
ACCCAAACCCAGTCAAAACG+GGG - Chr8:90059012-90059031 None:intergenic 50.0%
ACGGGGAAAACCCGTCAAAT+TGG - Chr8:90058995-90059014 None:intergenic 50.0%
ACTGGGTTTGGGTATGGGTA+TGG + Chr8:90059019-90059038 MsG0880047727.01.T01:intron 50.0%
ATACCCTACCCATACCCAAC+GGG - Chr8:90059406-90059425 None:intergenic 50.0%
CATGTGGGTCCCATTGTTAC+GGG + Chr8:90057018-90057037 MsG0880047727.01.T01:intron 50.0%
CGGGGAAAACCCGTCAAATT+GGG - Chr8:90058994-90059013 None:intergenic 50.0%
CGTATCGTTAGGCATGGCAA+TGG - Chr8:90059491-90059510 None:intergenic 50.0%
CTAAGATGCTTAGGCCCTGT+TGG - Chr8:90057802-90057821 None:intergenic 50.0%
CTCTCAAACAGCCTCACAAG+TGG - Chr8:90057360-90057379 None:intergenic 50.0%
CTGGGTTTGGGTATGGGTAT+GGG + Chr8:90059020-90059039 MsG0880047727.01.T01:intron 50.0%
CTTGAGGCAGCAGATCTTGA+TGG + Chr8:90058741-90058760 MsG0880047727.01.T01:CDS 50.0%
GAGAATCGGGTATGTGGATG+GGG + Chr8:90059439-90059458 MsG0880047727.01.T01:intron 50.0%
GATACCCTACCCATACCCAA+CGG - Chr8:90059407-90059426 None:intergenic 50.0%
GGCAACAAAACCCATACCCA+CGG + Chr8:90058950-90058969 MsG0880047727.01.T01:intron 50.0%
GTTGGGTATGGGTAGGGTAT+CGG + Chr8:90059406-90059425 MsG0880047727.01.T01:intron 50.0%
TCTTGCTGAGTCCATGTGCA+AGG + Chr8:90058356-90058375 MsG0880047727.01.T01:CDS 50.0%
TTAGCAGCATACCTAGGCAC+AGG + Chr8:90058099-90058118 MsG0880047727.01.T01:CDS 50.0%
TTCTCATCCCCGTTGGGTAT+GGG + Chr8:90059395-90059414 MsG0880047727.01.T01:intron 50.0%
TTTCTCATCCCCGTTGGGTA+TGG + Chr8:90059394-90059413 MsG0880047727.01.T01:intron 50.0%
! ATTTGGGACGGGTTTGGGTA+TGG - Chr8:90059110-90059129 None:intergenic 50.0%
! GCGGTCTTCTTCTCTGAAGA+AGG - Chr8:90057945-90057964 None:intergenic 50.0%
! TTGGGTATGGGTAGGGTATC+GGG + Chr8:90059407-90059426 MsG0880047727.01.T01:intron 50.0%
! TTTGGGACGGGTTTGGGTAT+GGG - Chr8:90059109-90059128 None:intergenic 50.0%
!! CAAATTGGGTTTGGTTCGGG+TGG - Chr8:90058980-90058999 None:intergenic 50.0%
!! TGTCGTGGTGGACTAGGAAT+AGG - Chr8:90056428-90056447 None:intergenic 50.0%
!!! GGGTTTTCCCCGTTTTGACT+GGG + Chr8:90059002-90059021 MsG0880047727.01.T01:intron 50.0%
!!! TCCCCGTTTTGACTGGGTTT+GGG + Chr8:90059008-90059027 MsG0880047727.01.T01:intron 50.0%
!!! TTCCCCGTTTTGACTGGGTT+TGG + Chr8:90059007-90059026 MsG0880047727.01.T01:intron 50.0%
AAGAGCTTCTCGACTGCTGC+CGG + Chr8:90058576-90058595 MsG0880047727.01.T01:CDS 55.0%
AATTCCACCGTCCGCTTGCA+AGG - Chr8:90057210-90057229 None:intergenic 55.0%
ACGGACACGATACGTAGGCA+TGG + Chr8:90058929-90058948 MsG0880047727.01.T01:intron 55.0%
ACGGGTTTGGGTATGGGTTC+GGG - Chr8:90059103-90059122 None:intergenic 55.0%
AGTAGCCCCACGTAAAGTGG+TGG + Chr8:90057041-90057060 MsG0880047727.01.T01:intron 55.0%
AGTGTCCCTAGCACTCATCG+CGG - Chr8:90056950-90056969 None:intergenic 55.0%
ATCCCCGTTGGGTATGGGTA+GGG + Chr8:90059400-90059419 MsG0880047727.01.T01:intron 55.0%
ATCGGGTATGTGGATGGGGA+AGG + Chr8:90059443-90059462 MsG0880047727.01.T01:intron 55.0%
ATTCCACCGTCCGCTTGCAA+GGG - Chr8:90057209-90057228 None:intergenic 55.0%
CTTCACCGCGATGAGTGCTA+GGG + Chr8:90056942-90056961 MsG0880047727.01.T01:intron 55.0%
GAAGCACGGACACGATACGT+AGG + Chr8:90058924-90058943 MsG0880047727.01.T01:intron 55.0%
GGGGCTACTCCCGTAACAAT+GGG - Chr8:90057030-90057049 None:intergenic 55.0%
GTAGCCCCACGTAAAGTGGT+GGG + Chr8:90057042-90057061 MsG0880047727.01.T01:intron 55.0%
GTCTTCACTGGCATGGCTCT+CGG + Chr8:90058279-90058298 MsG0880047727.01.T01:CDS 55.0%
GTGGGGATAAAGGGGTTTGG+AGG - Chr8:90058023-90058042 None:intergenic 55.0%
TACCCTACCCATACCCAACG+GGG - Chr8:90059405-90059424 None:intergenic 55.0%
TACGGGTATGGGACGGGTAA+CGG + Chr8:90059061-90059080 MsG0880047727.01.T01:intron 55.0%
TAGCCCCACGTAAAGTGGTG+GGG + Chr8:90057043-90057062 MsG0880047727.01.T01:intron 55.0%
TCTTCACCGCGATGAGTGCT+AGG + Chr8:90056941-90056960 MsG0880047727.01.T01:intron 55.0%
TGGGGCTACTCCCGTAACAA+TGG - Chr8:90057031-90057050 None:intergenic 55.0%
TTGCAAGCGGACGGTGGAAT+TGG + Chr8:90057209-90057228 MsG0880047727.01.T01:intron 55.0%
TTTGGGTATGGGTTCGGGGT+GGG - Chr8:90059098-90059117 None:intergenic 55.0%
! GACGGGTTTGGGTATGGGTT+CGG - Chr8:90059104-90059123 None:intergenic 55.0%
!! CGGGTTTTCCCCGTTTTGAC+TGG + Chr8:90059001-90059020 MsG0880047727.01.T01:intron 55.0%
!! GGGACGGGTAACGGGTATAT+AGG + Chr8:90059070-90059089 MsG0880047727.01.T01:intron 55.0%
AATCTCATCCCCGTCCCCGA+CGG - Chr8:90059371-90059390 None:intergenic 60.0%
ACGGGTATGGGACGGGTAAC+GGG + Chr8:90059062-90059081 MsG0880047727.01.T01:intron 60.0%
ATACCCAAACCCGTCGGGGA+CGG + Chr8:90059358-90059377 MsG0880047727.01.T01:CDS 60.0%
ATGTGCCCCTTGCAAGCGGA+CGG + Chr8:90057200-90057219 MsG0880047727.01.T01:intron 60.0%
ATTCAATGCGGGGACGGGGA+TGG + Chr8:90059328-90059347 MsG0880047727.01.T01:CDS 60.0%
CATCCCCGTTGGGTATGGGT+AGG + Chr8:90059399-90059418 MsG0880047727.01.T01:intron 60.0%
CGGGTTTGGGTATGGGTTCG+GGG - Chr8:90059102-90059121 None:intergenic 60.0%
CGTTAGGCATGGCAATGGGG+CGG - Chr8:90059486-90059505 None:intergenic 60.0%
GGGAGTAGCCCCACGTAAAG+TGG + Chr8:90057038-90057057 MsG0880047727.01.T01:intron 60.0%
GGGTGGGTAACCGTGGGTAT+GGG - Chr8:90058963-90058982 None:intergenic 60.0%
GTGGCCCCACCACTTTACGT+GGG - Chr8:90057050-90057069 None:intergenic 60.0%
GTTAGGCATGGCAATGGGGC+GGG - Chr8:90059485-90059504 None:intergenic 60.0%
GTTTGGGTATGGGTTCGGGG+TGG - Chr8:90059099-90059118 None:intergenic 60.0%
TGGCCCCACCACTTTACGTG+GGG - Chr8:90057049-90057068 None:intergenic 60.0%
TGTGGCCCCACCACTTTACG+TGG - Chr8:90057051-90057070 None:intergenic 60.0%
TTAGGCATGGCAATGGGGCG+GGG - Chr8:90059484-90059503 None:intergenic 60.0%
TTCAATGCGGGGACGGGGAT+GGG + Chr8:90059329-90059348 MsG0880047727.01.T01:CDS 60.0%
TTCACTGGCATGGCTCTCGG+TGG + Chr8:90058282-90058301 MsG0880047727.01.T01:CDS 60.0%
TTCCACCGTCCGCTTGCAAG+GGG - Chr8:90057208-90057227 None:intergenic 60.0%
! CACACGTATCTGAGGCGTGC+TGG + Chr8:90059596-90059615 MsG0880047727.01.T01:intron 60.0%
! GAGACGTGTCGACGGCGTAT+CGG + Chr8:90059618-90059637 MsG0880047727.01.T01:intron 60.0%
! TGGTTCGGGTGGGTAACCGT+GGG - Chr8:90058969-90058988 None:intergenic 60.0%
!! TTGGTTCGGGTGGGTAACCG+TGG - Chr8:90058970-90058989 None:intergenic 60.0%
AGAAGAAGACCGCGGCGTGG+CGG + Chr8:90057952-90057971 MsG0880047727.01.T01:CDS 65.0%
ATCTCATCCCCGTCCCCGAC+GGG - Chr8:90059370-90059389 None:intergenic 65.0%
CAGAGAAGAAGACCGCGGCG+TGG + Chr8:90057949-90057968 MsG0880047727.01.T01:CDS 65.0%
CGGGGATACCCAAACCCGTC+GGG + Chr8:90059353-90059372 MsG0880047727.01.T01:CDS 65.0%
CGGGTGGGTAACCGTGGGTA+TGG - Chr8:90058964-90058983 None:intergenic 65.0%
GCGGGGATACCCAAACCCGT+CGG + Chr8:90059352-90059371 MsG0880047727.01.T01:CDS 65.0%
GCGTGCTGGAGACGTGTCGA+CGG + Chr8:90059610-90059629 MsG0880047727.01.T01:intron 65.0%
GCTTCTCGACTGCTGCCGGT+AGG + Chr8:90058580-90058599 MsG0880047727.01.T01:CDS 65.0%
GGGGATACCCAAACCCGTCG+GGG + Chr8:90059354-90059373 MsG0880047727.01.T01:CDS 65.0%
TACCCAAACCCGTCGGGGAC+GGG + Chr8:90059359-90059378 MsG0880047727.01.T01:CDS 65.0%
TCAATGCGGGGACGGGGATG+GGG + Chr8:90059330-90059349 MsG0880047727.01.T01:CDS 65.0%
! TCTGAAGTTCCGCCACGCCG+CGG - Chr8:90057964-90057983 None:intergenic 65.0%
ACCCAAACCCGTCGGGGACG+GGG + Chr8:90059360-90059379 MsG0880047727.01.T01:CDS 70.0%
CAATGGGGCGGGGTGGGGAT+GGG - Chr8:90059474-90059493 None:intergenic 70.0%
CATGGCAATGGGGCGGGGTG+GGG - Chr8:90059479-90059498 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG - Chr8:90059480-90059499 None:intergenic 70.0%
TGCCCCTTGCAAGCGGACGG+TGG + Chr8:90057203-90057222 MsG0880047727.01.T01:intron 70.0%
! ATCCCCGTCCCCGACGGGTT+TGG - Chr8:90059365-90059384 None:intergenic 70.0%
! TCCCCGTCCCCGACGGGTTT+GGG - Chr8:90059364-90059383 None:intergenic 70.0%
ATGCGGGGACGGGGATGGGG+CGG + Chr8:90059333-90059352 MsG0880047727.01.T01:CDS 75.0%
GCAATGGGGCGGGGTGGGGA+TGG - Chr8:90059475-90059494 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG - Chr8:90059481-90059500 None:intergenic 75.0%
! TGCGGGGACGGGGATGGGGC+GGG + Chr8:90059334-90059353 MsG0880047727.01.T01:CDS 80.0%
! GCGGGGACGGGGATGGGGCG+GGG + Chr8:90059335-90059354 MsG0880047727.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr8 gene 90056382 90060231 90056382 ID=MsG0880047727.01;Name=MsG0880047727.01
Chr8 mRNA 90056382 90060231 90056382 ID=MsG0880047727.01.T01;Parent=MsG0880047727.01;Name=MsG0880047727.01.T01;_AED=0.35;_eAED=0.40;_QI=325|0.33|0.75|1|0.66|0.5|4|175|392
Chr8 exon 90056382 90056644 90056382 ID=MsG0880047727.01.T01:exon:2591;Parent=MsG0880047727.01.T01
Chr8 exon 90057806 90058778 90057806 ID=MsG0880047727.01.T01:exon:2592;Parent=MsG0880047727.01.T01
Chr8 exon 90059291 90059410 90059291 ID=MsG0880047727.01.T01:exon:2593;Parent=MsG0880047727.01.T01
Chr8 exon 90059909 90060231 90059909 ID=MsG0880047727.01.T01:exon:2594;Parent=MsG0880047727.01.T01
Chr8 five_prime_UTR 90056382 90056644 90056382 ID=MsG0880047727.01.T01:five_prime_utr;Parent=MsG0880047727.01.T01
Chr8 five_prime_UTR 90057806 90057867 90057806 ID=MsG0880047727.01.T01:five_prime_utr;Parent=MsG0880047727.01.T01
Chr8 CDS 90057868 90058778 90057868 ID=MsG0880047727.01.T01:cds;Parent=MsG0880047727.01.T01
Chr8 CDS 90059291 90059410 90059291 ID=MsG0880047727.01.T01:cds;Parent=MsG0880047727.01.T01
Chr8 CDS 90059909 90060056 90059909 ID=MsG0880047727.01.T01:cds;Parent=MsG0880047727.01.T01
Chr8 three_prime_UTR 90060057 90060231 90060057 ID=MsG0880047727.01.T01:three_prime_utr;Parent=MsG0880047727.01.T01
Gene Sequence

>MsG0880047727.01.T01

ATGGGCAGTGATGAAGCTCAACAGCTATTGCTTTCAGAGTCAAGGGAACATTCTCATCTCAATGAGAAGAGTGACCTTCTTCAGAGAAGAAGACCGCGGCGTGGCGGAACTTCAGAGACAGATATCAATCTGCAGCAAGAACAGAATGGTGTCCTCCAAACCCCTTTATCCCCACAATGTATAACTGATAAACAAGAAGCAGAATTCAAGTTCAGGCTAGTGTTCTTGTGTTTAGCAGCATACCTAGGCACAGGTACCTTATGTTTCTATCTAACAAGTTACCAAATTGAGGGCATAAAAACAAATAATTTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACTACTGTTGGATATGGAGATCTTGTTCCAAATAGCACTATAGCAAAACTCCTTGCATGCATTTATGTCTTCACTGGCATGGCTCTCGGTGGCTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAGAAACAGGAAATATTTCTTGCTGAGTCCATGTGCAAGGCTGAAAATTTTGGTCTACAAGAGGTTGCTAAAGAGCTTGAAACTAAGAAAAGCAAATACAAGTTTGTGCTTGCAGTAGCCACTTTTTTTGTGCTCATGATTGCAGGAACTGTTTTTCTGTATTTTATTGAGAATCTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACGGTCACTACTTTAGGTTATGGGGATAAGAGCTTCTCGACTGCTGCCGGTAGGATTTTTGCCGTGTTTTGGATATTGAGCAGCACCATTTGCTTGGCTCAGTCTTTTGCTTATCTTGCTGAACTCTATACTGAAGATAGACAAAGATCACTGGCAAAAATGGTTCTCACCCGAAAATTATCACTAAGTGATCTTGAGGCAGCAGATCTTGATGGAGACAAAGTTGTCAGGGATGCAAAAAAACTTCTATTTTTTATTAAAAAAATTATTCAATGCGGGGACGGGGATGGGGCGGGGATACCCAAACCCGTCGGGGACGGGGATGAGATTCAATTTCTCATCCCCGTTGGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATATTTCAGCAGTGATGGAGAGTTTTAGAAAACTAGACTGTGATCAATCAGGAACTCTGACTGAAGCTGATATCAGAAATTTTGAATTCTGA

Protein sequence

>MsG0880047727.01.T01

MGSDEAQQLLLSESREHSHLNEKSDLLQRRRPRRGGTSETDINLQQEQNGVLQTPLSPQCITDKQEAEFKFRLVFLCLAAYLGTGTLCFYLTSYQIEGIKTNNFLDALYFCVVTMTTVGYGDLVPNSTIAKLLACIYVFTGMALGGLILSKAADYIVEKQEIFLAESMCKAENFGLQEVAKELETKKSKYKFVLAVATFFVLMIAGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKVVRDAKKLLFFIKKIIQCGDGDGAGIPKPVGDGDEIQFLIPVGAAEFVVYKLKEMGKINQEDISAVMESFRKLDCDQSGTLTEADIRNFEF*