AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042876.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042876.01.T01 MTR_8g023990 94.847 524 11 8 58 572 1 517 0.0 985
MsG0880042876.01.T01 MTR_7g117455 89.815 108 11 0 225 332 116 223 1.71e-63 215
MsG0880042876.01.T01 MTR_1g058350 70.796 113 29 2 222 332 71 181 2.11e-47 169
MsG0880042876.01.T01 MTR_5g053920 42.324 241 90 7 135 339 86 313 6.79e-47 169
MsG0880042876.01.T01 MTR_7g105370 73.333 105 25 2 231 335 65 166 3.02e-45 162
MsG0880042876.01.T01 MTR_1g093600 61.111 126 34 2 220 332 185 308 3.36e-42 156
MsG0880042876.01.T01 MTR_1g116920 50.435 115 44 3 200 314 145 246 1.35e-27 113
MsG0880042876.01.T01 MTR_4g028130 36.134 119 68 4 226 342 314 426 7.00e-15 78.6
MsG0880042876.01.T01 MTR_4g028130 26.891 238 152 6 107 342 209 426 8.15e-15 78.2
MsG0880042876.01.T01 MTR_4g028130 37.273 110 61 4 226 333 314 417 1.97e-14 77.0
MsG0880042876.01.T01 MTR_7g073240 35.338 133 76 5 203 332 98 223 4.06e-14 74.3
MsG0880042876.01.T01 MTR_2g011940 38.182 110 60 4 226 333 343 446 4.14e-14 76.3
MsG0880042876.01.T01 MTR_2g011940 38.182 110 60 4 226 333 352 455 5.05e-14 75.5
MsG0880042876.01.T01 MTR_2g011940 38.182 110 60 4 226 333 352 455 6.26e-14 75.1
MsG0880042876.01.T01 MTR_3g467380 38.462 91 51 3 226 314 338 425 2.09e-12 70.5
MsG0880042876.01.T01 MTR_4g088210 40.206 97 56 2 225 319 146 242 5.34e-12 69.3
MsG0880042876.01.T01 MTR_4g088210 40.206 97 56 2 225 319 146 242 5.57e-12 68.9
MsG0880042876.01.T01 MTR_2g014770 36.937 111 68 2 211 319 142 252 1.01e-11 68.2
MsG0880042876.01.T01 MTR_2g014770 41.237 97 55 2 225 319 156 252 1.11e-11 68.2
MsG0880042876.01.T01 MTR_2g094570 37.624 101 61 2 222 320 103 203 2.41e-11 67.0
MsG0880042876.01.T01 MTR_2g094570 37.624 101 61 2 222 320 103 203 2.41e-11 67.0
MsG0880042876.01.T01 MTR_2g094570 37.624 101 61 2 222 320 159 259 2.76e-11 67.0
MsG0880042876.01.T01 MTR_3g073420 31.579 133 80 3 199 330 95 217 7.59e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042876.01.T01 AT2G46870 46.006 313 96 10 207 510 7 255 3.16e-72 234
MsG0880042876.01.T01 AT1G01030 48.136 295 91 11 222 505 51 294 8.57e-67 221
MsG0880042876.01.T01 AT3G61970 43.910 312 85 12 207 510 1 230 5.46e-64 212
MsG0880042876.01.T01 AT1G01030 83.186 113 18 1 222 333 51 163 8.05e-61 205
MsG0880042876.01.T01 AT4G01500 36.467 351 147 9 219 549 28 322 1.32e-51 180
MsG0880042876.01.T01 AT3G11580 66.116 121 28 2 222 331 24 142 2.48e-48 168
MsG0880042876.01.T01 AT3G11580 66.116 121 28 2 222 331 24 142 2.48e-48 168
MsG0880042876.01.T01 AT3G11580 66.116 121 28 2 222 331 24 142 2.48e-48 168
MsG0880042876.01.T01 AT3G11580 66.116 121 28 2 222 331 24 142 5.78e-48 168
MsG0880042876.01.T01 AT1G68840 44.091 220 90 6 135 332 85 293 7.07e-48 171
MsG0880042876.01.T01 AT1G68840 44.091 220 90 6 135 332 85 293 7.07e-48 171
MsG0880042876.01.T01 AT5G06250 59.559 136 43 2 223 348 42 175 4.19e-47 166
MsG0880042876.01.T01 AT3G11580 64.516 124 31 2 219 331 21 142 5.03e-47 169
MsG0880042876.01.T01 AT5G06250 59.559 136 43 2 223 348 42 175 6.81e-47 166
MsG0880042876.01.T01 AT5G06250 59.559 136 43 2 223 348 42 175 7.88e-47 166
MsG0880042876.01.T01 AT1G13260 44.395 223 87 6 135 332 82 292 8.08e-47 167
MsG0880042876.01.T01 AT5G06250 59.559 136 43 2 223 348 42 175 1.17e-46 165
MsG0880042876.01.T01 AT5G06250 59.559 136 43 2 223 348 42 175 1.35e-46 165
MsG0880042876.01.T01 AT2G36080 68.696 115 31 2 220 331 31 143 3.65e-45 157
MsG0880042876.01.T01 AT2G36080 68.696 115 31 2 220 331 31 143 3.65e-45 157
MsG0880042876.01.T01 AT2G36080 69.912 113 29 2 222 331 33 143 4.92e-45 160
MsG0880042876.01.T01 AT2G36080 68.696 115 31 2 220 331 31 143 5.14e-45 159
MsG0880042876.01.T01 AT1G25560 63.025 119 34 2 223 333 191 307 1.78e-43 159
MsG0880042876.01.T01 AT3G25730 40.265 226 89 7 135 332 82 289 1.80e-42 155
MsG0880042876.01.T01 AT1G50680 33.466 251 119 10 106 312 7 253 2.05e-25 107
MsG0880042876.01.T01 AT1G51120 34.146 205 102 6 138 312 70 271 4.74e-25 107
MsG0880042876.01.T01 AT4G32010 37.273 110 61 4 226 333 285 388 1.47e-14 77.4
MsG0880042876.01.T01 AT4G32010 37.273 110 61 4 226 333 281 384 1.51e-14 77.4
MsG0880042876.01.T01 AT2G30470 39.560 91 50 3 226 314 294 381 9.52e-14 74.7
MsG0880042876.01.T01 AT1G35240 39.669 121 64 5 227 345 126 239 1.21e-12 71.2
MsG0880042876.01.T01 AT1G35520 38.843 121 65 5 227 345 126 239 6.33e-12 68.9
MsG0880042876.01.T01 AT1G34310 38.017 121 66 5 227 345 126 239 1.35e-11 67.8
MsG0880042876.01.T01 AT2G33860 40.217 92 54 1 225 315 157 248 1.90e-11 67.4
MsG0880042876.01.T01 AT1G35540 32.099 162 101 5 186 345 85 239 2.14e-11 67.0
MsG0880042876.01.T01 AT1G34410 37.190 121 67 5 227 345 126 239 6.91e-11 65.5
MsG0880042876.01.T01 AT2G28350 29.927 137 87 4 180 314 74 203 7.22e-11 65.5
MsG0880042876.01.T01 AT2G28350 30.147 136 83 4 185 314 74 203 7.76e-11 65.5

Find 93 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGGTAAATCTCAAATTA+TGG 0.195674 8:+15268272 None:intergenic
GGAGATTTAGATACTCTTAT+TGG 0.204888 8:-15269396 MsG0880042876.01.T01:CDS
TTATCAAGTCAAATTCTTCT+TGG 0.232204 8:+15270079 None:intergenic
ATGTTTCCATTTCATCAATA+TGG 0.246411 8:-15269022 MsG0880042876.01.T01:CDS
TTTAAAGCAAATAGATTTCA+TGG 0.253920 8:-15269686 MsG0880042876.01.T01:CDS
TGAATTTCATTTCCCTCTTT+AGG 0.255928 8:+15268255 None:intergenic
AACAACAATATTCTATTAGA+TGG 0.265622 8:-15269159 MsG0880042876.01.T01:CDS
CAAGAGGAGAAAATGGAAAA+TGG 0.285227 8:-15268301 MsG0880042876.01.T01:three_prime_UTR
GCAGCATCTAAAGGAGGATT+AGG 0.296328 8:-15269760 MsG0880042876.01.T01:CDS
ATAGAATATTGTTGTTGATT+AGG 0.302183 8:+15269166 None:intergenic
AATTCATCTGATTGTGTAAA+GGG 0.302465 8:+15269056 None:intergenic
TTTGAGTCAAGAGGAGAAAA+TGG 0.308260 8:-15268308 MsG0880042876.01.T01:three_prime_UTR
TCATGCTAACCAGTGTCTTC+AGG 0.309379 8:+15274497 None:intergenic
GGCATAGGTTGTTTATAGAT+TGG 0.332546 8:-15269261 MsG0880042876.01.T01:CDS
CTACTAATGGTGCTGCAAAA+AGG 0.355470 8:-15268763 MsG0880042876.01.T01:CDS
GCTGCTGAATTGTGAGATTC+TGG 0.358440 8:+15269778 None:intergenic
TTATTCACAAGAAGAATTAG+AGG 0.367007 8:-15270025 MsG0880042876.01.T01:CDS
CCACCACCATATTGATGAAA+TGG 0.378629 8:+15269016 None:intergenic
AAAGAGGGAAATGAAATTCA+TGG 0.380683 8:-15268252 MsG0880042876.01.T01:three_prime_UTR
CTTCAGAATGGTTGGAGTCA+TGG 0.387400 8:-15273653 MsG0880042876.01.T01:CDS
TCTTGTTGTTCTTGTTGAAC+AGG 0.389155 8:+15269607 None:intergenic
TGATATGAGTTTAATTAGCT+TGG 0.390554 8:-15268333 MsG0880042876.01.T01:three_prime_UTR
TGCTGATGTTGTAACCTTTG+TGG 0.393602 8:+15269094 None:intergenic
GAAGATAGAGAGAAATTAGA+AGG 0.403502 8:+15269907 None:intergenic
CAACAAGAAGGAGGAGGAGG+AGG 0.405771 8:-15268881 MsG0880042876.01.T01:CDS
TTCAGAATGGTTGGAGTCAT+GGG 0.411112 8:-15273652 MsG0880042876.01.T01:intron
ATTTGACTTGATAATTATCA+TGG 0.414547 8:-15270070 MsG0880042876.01.T01:CDS
CAAAGCTATGTTATGACAAA+AGG 0.424983 8:-15269364 MsG0880042876.01.T01:CDS
GCGGCGTCGGCGAATTGTTT+AGG 0.427168 8:-15269282 MsG0880042876.01.T01:CDS
GATATGAGTTTAATTAGCTT+GGG 0.428053 8:-15268332 MsG0880042876.01.T01:three_prime_UTR
CTTTAAATTTGTGAAATTTG+AGG 0.440342 8:+15269702 None:intergenic
TGTTGTAACCTTTGTGGTGT+TGG 0.444187 8:+15269100 None:intergenic
TTCAACAAGTGATGATAACT+TGG 0.444286 8:-15268699 MsG0880042876.01.T01:CDS
GCTACTACTAGTACTACTAA+TGG 0.446131 8:-15268776 MsG0880042876.01.T01:CDS
AATTTGAGATTTACCTAAAG+AGG 0.460740 8:-15268268 MsG0880042876.01.T01:three_prime_UTR
TGTTGGGAAACTAAACCGTT+TGG 0.462142 8:-15269518 MsG0880042876.01.T01:CDS
TGATGATGATAATGAGAAAC+AGG 0.463873 8:+15268821 None:intergenic
TGTTGATTAGGAAGAAAGAA+AGG 0.468194 8:+15269178 None:intergenic
AAATTCATCTGATTGTGTAA+AGG 0.468921 8:+15269055 None:intergenic
TCATTTGATGTTGAATCAAG+TGG 0.470685 8:+15269463 None:intergenic
ACCATCACTTCAACATTTGA+AGG 0.471635 8:-15268657 MsG0880042876.01.T01:CDS
ATAGGTTGTTTATAGATTGG+AGG 0.472973 8:-15269258 MsG0880042876.01.T01:CDS
AACCTTTGTGGTGTTGGATA+AGG 0.473019 8:+15269106 None:intergenic
CTGTAACACCAAGTGATGTT+GGG 0.478186 8:-15269534 MsG0880042876.01.T01:CDS
GAGAGAGTGATCAAATCAAA+AGG 0.480431 8:+15268117 None:intergenic
ACAACAATATTCTATTAGAT+GGG 0.482618 8:-15269158 MsG0880042876.01.T01:CDS
GCTGTAACACCAAGTGATGT+TGG 0.482714 8:-15269535 MsG0880042876.01.T01:CDS
CATTACTAGTTAAATTTCCA+TGG 0.483330 8:+15268798 None:intergenic
TTTATACATAGATTTGACTA+AGG 0.483770 8:+15268209 None:intergenic
TTGCATCTTGATGCTGGTGA+TGG 0.484665 8:+15269728 None:intergenic
CAGCATCTAAAGGAGGATTA+GGG 0.488321 8:-15269759 MsG0880042876.01.T01:CDS
CAGCAACAAGAAGGAGGAGG+AGG 0.488402 8:-15268884 MsG0880042876.01.T01:CDS
AAGATAGAAATGGAAAATTG+TGG 0.489600 8:-15269417 MsG0880042876.01.T01:CDS
AGGTTGTTGCATCTTGATGC+TGG 0.491253 8:+15269722 None:intergenic
CATGCTAACCAGTGTCTTCA+GGG 0.491494 8:+15274498 None:intergenic
TCGGCGAATTGTTTAGGCAT+AGG 0.495937 8:-15269276 MsG0880042876.01.T01:CDS
TTTCTCATCAACAAAATCAA+TGG 0.499739 8:-15269831 MsG0880042876.01.T01:CDS
CACAATTCAGCAGCATCTAA+AGG 0.501419 8:-15269769 MsG0880042876.01.T01:CDS
CTTCCTTGAGGCATTGATGA+TGG 0.504465 8:+15268920 None:intergenic
CCATTTCATCAATATGGTGG+TGG 0.507266 8:-15269016 MsG0880042876.01.T01:CDS
AACATCAACAAGATTTGAAG+AGG 0.528740 8:-15268603 MsG0880042876.01.T01:CDS
ATTTGAGATTTACCTAAAGA+GGG 0.530220 8:-15268267 MsG0880042876.01.T01:three_prime_UTR
CATCAACAAAATCAATGGCT+AGG 0.531892 8:-15269826 MsG0880042876.01.T01:CDS
AAGGTTGTTTGGTGTGAACA+TGG 0.542303 8:-15268738 MsG0880042876.01.T01:CDS
GCTATGTTATGACAAAAGGT+TGG 0.544721 8:-15269360 MsG0880042876.01.T01:CDS
TTTAGTTTCCCAACATCACT+TGG 0.546847 8:+15269526 None:intergenic
GATAGAGAGAAATTAGAAGG+TGG 0.548815 8:+15269910 None:intergenic
GATTCAACATCAAATGAGAA+AGG 0.548994 8:-15269457 MsG0880042876.01.T01:CDS
TTATGATGATGAGTTGTTGA+AGG 0.549913 8:+15269877 None:intergenic
AGTGATGGTACTATTGAAGA+AGG 0.553751 8:+15268671 None:intergenic
ACCTTCAAATGTTGAAGTGA+TGG 0.554721 8:+15268656 None:intergenic
GAAAGTGTTTCTTCATGATG+AGG 0.555132 8:+15268632 None:intergenic
TTTCCATTTCATCAATATGG+TGG 0.556128 8:-15269019 MsG0880042876.01.T01:CDS
TTTGGTGTGAACATGGAGTG+TGG 0.563933 8:-15268731 MsG0880042876.01.T01:CDS
TGTTGTTCTTGTTGAACAGG+AGG 0.569506 8:+15269610 None:intergenic
GTGAAAAGTGTTGCTGATGA+AGG 0.570944 8:+15269202 None:intergenic
GTTTCATTTCAACGCGGCGT+CGG 0.571504 8:-15269295 MsG0880042876.01.T01:CDS
AATCATTACCCTGAAGACAC+TGG 0.580410 8:-15274506 MsG0880042876.01.T01:intron
TGAGGCATTGATGATGGTGC+TGG 0.585946 8:+15268926 None:intergenic
AGTACAAGACAGCAACAAGA+AGG 0.600583 8:-15268893 MsG0880042876.01.T01:CDS
CAATATTCTATTAGATGGGG+AGG 0.609587 8:-15269154 MsG0880042876.01.T01:CDS
AGACAGCAACAAGAAGGAGG+AGG 0.619946 8:-15268887 MsG0880042876.01.T01:CDS
AGCTTGGGATTTGAGTCAAG+AGG 0.621367 8:-15268317 MsG0880042876.01.T01:three_prime_UTR
GATTTCATGGAATTGTCACT+AGG 0.623329 8:-15269673 MsG0880042876.01.T01:CDS
TTCCTTATCCAACACCACAA+AGG 0.633231 8:-15269108 MsG0880042876.01.T01:CDS
ACAAGACAGCAACAAGAAGG+AGG 0.633565 8:-15268890 MsG0880042876.01.T01:CDS
CAACAATATTCTATTAGATG+GGG 0.645043 8:-15269157 MsG0880042876.01.T01:CDS
GCACCATCATCAATGCCTCA+AGG 0.646120 8:-15268923 MsG0880042876.01.T01:CDS
TCTCATTATCATCATCACCA+TGG 0.646213 8:-15268815 MsG0880042876.01.T01:CDS
CTTGTACTCAAGCTTCCTTG+AGG 0.650771 8:+15268908 None:intergenic
GGTGTGAACATGGAGTGTGG+TGG 0.666596 8:-15268728 MsG0880042876.01.T01:CDS
AATTCAGCAGCATCTAAAGG+AGG 0.671535 8:-15269766 MsG0880042876.01.T01:CDS
GACATTGTTTCATTTCAACG+CGG 0.724243 8:-15269301 MsG0880042876.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTTTTATATA+TGG - Chr8:15271455-15271474 MsG0880042876.01.T01:intron 0.0%
!! AAAAAAAATCTAATATTCAT+AGG + Chr8:15269412-15269431 None:intergenic 10.0%
!! TAAAATTTATATAAACAGTT+TGG + Chr8:15269194-15269213 None:intergenic 10.0%
!! TTATTCAATAAATCTAAAAA+AGG - Chr8:15269611-15269630 MsG0880042876.01.T01:CDS 10.0%
!!! AAACTGTTTATATAAATTTT+AGG - Chr8:15269193-15269212 MsG0880042876.01.T01:CDS 10.0%
!!! AACTGTTTATATAAATTTTA+GGG - Chr8:15269194-15269213 MsG0880042876.01.T01:CDS 10.0%
!!! AATAAGTAAGTTTTTATAAA+AGG - Chr8:15269723-15269742 MsG0880042876.01.T01:CDS 10.0%
!!! ATAAGTAAGTTTTTATAAAA+GGG - Chr8:15269724-15269743 MsG0880042876.01.T01:CDS 10.0%
!!! GCTTAATTATAATTTTTTTT+AGG - Chr8:15268713-15268732 MsG0880042876.01.T01:CDS 10.0%
!!! TATAATTTACCTTTTATAAT+TGG + Chr8:15269479-15269498 None:intergenic 10.0%
!! AAAAAAAATTGTATATGATG+AGG + Chr8:15272515-15272534 None:intergenic 15.0%
!! AAAAAAATTGTATATGATGA+GGG + Chr8:15272514-15272533 None:intergenic 15.0%
!! AATTTAATGGAAAATACTAA+GGG - Chr8:15270539-15270558 MsG0880042876.01.T01:intron 15.0%
!! ATTCTGCTAATTTAAATTAA+GGG - Chr8:15271662-15271681 MsG0880042876.01.T01:intron 15.0%
!! ATTTGACAAAATTAATAAAG+TGG + Chr8:15272455-15272474 None:intergenic 15.0%
!! CATTAAATTAATACAACAAA+AGG + Chr8:15270528-15270547 None:intergenic 15.0%
!! GAAAAGTTGAAATATTTATA+TGG + Chr8:15269237-15269256 None:intergenic 15.0%
!! TAATTTAATGGAAAATACTA+AGG - Chr8:15270538-15270557 MsG0880042876.01.T01:intron 15.0%
!! TATTCTGCTAATTTAAATTA+AGG - Chr8:15271661-15271680 MsG0880042876.01.T01:intron 15.0%
!! TGGGTTATTAAAAAAAATAT+GGG + Chr8:15272407-15272426 None:intergenic 15.0%
!! TTGAAGGAAAAAAATATATT+GGG + Chr8:15272426-15272445 None:intergenic 15.0%
!! TTGGGTTATTAAAAAAAATA+TGG + Chr8:15272408-15272427 None:intergenic 15.0%
!! TTTGAAGGAAAAAAATATAT+TGG + Chr8:15272427-15272446 None:intergenic 15.0%
!!! CTTTTGTTGTATTAATTTAA+TGG - Chr8:15270526-15270545 MsG0880042876.01.T01:intron 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG - Chr8:15269537-15269556 MsG0880042876.01.T01:CDS 15.0%
!!! TAATATTATTCAACTTTTGT+TGG + Chr8:15269995-15270014 None:intergenic 15.0%
!! AAAAAATTGTATATGATGAG+GGG + Chr8:15272513-15272532 None:intergenic 20.0%
!! AAAAGAATTACCAAGAAAAA+TGG + Chr8:15272350-15272369 None:intergenic 20.0%
!! AAACTCATTGAAATATTTGA+AGG + Chr8:15269355-15269374 None:intergenic 20.0%
!! AAATACTAACATTGTTCTTT+AGG + Chr8:15270668-15270687 None:intergenic 20.0%
!! AACAACAATATTCTATTAGA+TGG - Chr8:15273518-15273537 MsG0880042876.01.T01:intron 20.0%
!! AACTCATTGAAATATTTGAA+GGG + Chr8:15269354-15269373 None:intergenic 20.0%
!! AAGTCATTTATCAATAAAAG+AGG + Chr8:15268346-15268365 None:intergenic 20.0%
!! AATGTAAACTTAAGTCATAT+AGG + Chr8:15271267-15271286 None:intergenic 20.0%
!! ACAACAATATTCTATTAGAT+GGG - Chr8:15273519-15273538 MsG0880042876.01.T01:intron 20.0%
!! ACAAGTTAATGAATCAAATA+TGG - Chr8:15269774-15269793 MsG0880042876.01.T01:CDS 20.0%
!! AGTAACATTTAATTATGAGA+AGG - Chr8:15270201-15270220 MsG0880042876.01.T01:intron 20.0%
!! ATATGTTGTTGAAAAAAGAA+GGG + Chr8:15271992-15272011 None:intergenic 20.0%
!! ATTTAATGGAAAATACTAAG+GGG - Chr8:15270540-15270559 MsG0880042876.01.T01:intron 20.0%
!! ATTTATATAAACAGTTTGGT+CGG + Chr8:15269190-15269209 None:intergenic 20.0%
!! CAAATAACTCCAATTATAAA+AGG - Chr8:15269467-15269486 MsG0880042876.01.T01:CDS 20.0%
!! CTAAAATAGAATGTATCTAA+TGG - Chr8:15270718-15270737 MsG0880042876.01.T01:intron 20.0%
!! CTTTAAATTTGTGAAATTTG+AGG + Chr8:15272978-15272997 None:intergenic 20.0%
!! GGGTTATTAAAAAAAATATG+GGG + Chr8:15272406-15272425 None:intergenic 20.0%
!! TAATATTACCATAGATTTGA+GGG - Chr8:15270127-15270146 MsG0880042876.01.T01:intron 20.0%
!! TAATGAATCAAATATGGAAA+TGG - Chr8:15269780-15269799 MsG0880042876.01.T01:CDS 20.0%
!! TATATGTTGTTGAAAAAAGA+AGG + Chr8:15271993-15272012 None:intergenic 20.0%
!! TTTAGGTAAATCTCAAATTA+TGG + Chr8:15274408-15274427 None:intergenic 20.0%
!! TTTATACATAGATTTGACTA+AGG + Chr8:15274471-15274490 None:intergenic 20.0%
!!! AAAAGTCAATGGAAAATTTT+AGG + Chr8:15269270-15269289 None:intergenic 20.0%
!!! AAAATGTTATTTTGTGTCAT+GGG + Chr8:15270821-15270840 None:intergenic 20.0%
!!! AAAGTCAATGGAAAATTTTA+GGG + Chr8:15269269-15269288 None:intergenic 20.0%
!!! AATAAAGTGGAAAATTTTGA+AGG + Chr8:15272442-15272461 None:intergenic 20.0%
!!! AATGTTTAGGTTATTTCTAA+TGG + Chr8:15268278-15268297 None:intergenic 20.0%
!!! ATAGAATATTGTTGTTGATT+AGG + Chr8:15273514-15273533 None:intergenic 20.0%
!!! ATTTGACTTGATAATTATCA+TGG - Chr8:15272607-15272626 MsG0880042876.01.T01:intron 20.0%
!!! ATTTTAGTACTATTTAGAAG+TGG - Chr8:15274321-15274340 MsG0880042876.01.T01:intron 20.0%
!!! GAAAATATAGCTTTAAACAA+AGG + Chr8:15268206-15268225 None:intergenic 20.0%
!!! GATTTTAATTTGACTAAGTT+TGG + Chr8:15269060-15269079 None:intergenic 20.0%
!!! GTTTTTTCTCTTTAACAAAA+CGG + Chr8:15273345-15273364 None:intergenic 20.0%
!!! TAAAGTTCAAAAGTATTACT+TGG + Chr8:15271000-15271019 None:intergenic 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG + Chr8:15269527-15269546 None:intergenic 20.0%
!!! TTATTCGACTTTTTATGTTT+TGG + Chr8:15269093-15269112 None:intergenic 20.0%
!!! TTTAAAGCAAATAGATTTCA+TGG - Chr8:15272991-15273010 MsG0880042876.01.T01:intron 20.0%
!!! TTTTGAGTTTTTTTGACTTT+TGG + Chr8:15270397-15270416 None:intergenic 20.0%
! AAAAAAAATTTAGCCTGCAA+AGG + Chr8:15268401-15268420 None:intergenic 25.0%
! AAAAAGAAATCTACTTAGGT+TGG + Chr8:15268670-15268689 None:intergenic 25.0%
! AAAGGAAAACAAAGAAAAAG+AGG + Chr8:15272284-15272303 None:intergenic 25.0%
! AAATTCATCTGATTGTGTAA+AGG + Chr8:15273625-15273644 None:intergenic 25.0%
! AAATTCTCGAGGAAATTATT+TGG - Chr8:15268463-15268482 MsG0880042876.01.T01:three_prime_UTR 25.0%
! AAGAAAAATGGTATATGATG+AGG + Chr8:15272338-15272357 None:intergenic 25.0%
! AAGATAGAAATGGAAAATTG+TGG - Chr8:15273260-15273279 MsG0880042876.01.T01:intron 25.0%
! AATTCATCTACTTTGTACTA+AGG + Chr8:15270058-15270077 None:intergenic 25.0%
! AATTCATCTGATTGTGTAAA+GGG + Chr8:15273624-15273643 None:intergenic 25.0%
! ACTACATTGTAGATATTTCT+TGG - Chr8:15268438-15268457 MsG0880042876.01.T01:three_prime_UTR 25.0%
! AGTTGTTTAATCAATGTTTG+TGG + Chr8:15269701-15269720 None:intergenic 25.0%
! ATAGATAGATAGAGATAGAA+AGG + Chr8:15271916-15271935 None:intergenic 25.0%
! ATCGAGAAAAAATGATACAA+AGG + Chr8:15271487-15271506 None:intergenic 25.0%
! ATGAATAATGTGCTTATTTG+GGG + Chr8:15271866-15271885 None:intergenic 25.0%
! ATGTTTCCATTTCATCAATA+TGG - Chr8:15273655-15273674 MsG0880042876.01.T01:CDS 25.0%
! ATTGATTATATTCCAAGTTG+TGG + Chr8:15272172-15272191 None:intergenic 25.0%
! CAAATAAGCACATTATTCAT+GGG - Chr8:15271866-15271885 MsG0880042876.01.T01:intron 25.0%
! CAAATATGGAAATGGTTTAT+TGG - Chr8:15269788-15269807 MsG0880042876.01.T01:CDS 25.0%
! CAACAATATTCTATTAGATG+GGG - Chr8:15273520-15273539 MsG0880042876.01.T01:intron 25.0%
! CATGAATAATGTGCTTATTT+GGG + Chr8:15271867-15271886 None:intergenic 25.0%
! CATTACTAGTTAAATTTCCA+TGG + Chr8:15273882-15273901 None:intergenic 25.0%
! CCTAAAAAAGAAATCTACTT+AGG + Chr8:15268674-15268693 None:intergenic 25.0%
! CTCATATAAAAAACTGAACT+TGG + Chr8:15273724-15273743 None:intergenic 25.0%
! GTAATATTACCATAGATTTG+AGG - Chr8:15270126-15270145 MsG0880042876.01.T01:intron 25.0%
! GTTGTTTAATCAATGTTTGT+GGG + Chr8:15269700-15269719 None:intergenic 25.0%
! TAAAGACAAAAACAAAACCA+TGG + Chr8:15272210-15272229 None:intergenic 25.0%
! TACTCTATTTATTGTCATTG+CGG - Chr8:15268873-15268892 MsG0880042876.01.T01:CDS 25.0%
! TAGATAGATAGAGATAGAAA+GGG + Chr8:15271915-15271934 None:intergenic 25.0%
! TCGAGAAAAAATGATACAAA+GGG + Chr8:15271486-15271505 None:intergenic 25.0%
! TGATATGAGTTTAATTAGCT+TGG - Chr8:15274344-15274363 MsG0880042876.01.T01:intron 25.0%
! TTACTTGGAGTTAAAAAGAA+AGG + Chr8:15270985-15271004 None:intergenic 25.0%
! TTATCAAGTCAAATTCTTCT+TGG + Chr8:15272601-15272620 None:intergenic 25.0%
! TTATTCACAAGAAGAATTAG+AGG - Chr8:15272652-15272671 MsG0880042876.01.T01:intron 25.0%
! TTGTTTAATCAATGTTTGTG+GGG + Chr8:15269699-15269718 None:intergenic 25.0%
! TTTATAATATATACTCCCTC+CGG + Chr8:15269658-15269677 None:intergenic 25.0%
! TTTATATAAACAGTTTGGTC+GGG + Chr8:15269189-15269208 None:intergenic 25.0%
! TTTCTCATCAACAAAATCAA+TGG - Chr8:15272846-15272865 MsG0880042876.01.T01:intron 25.0%
!! AATTTGAGATTTACCTAAAG+AGG - Chr8:15274409-15274428 MsG0880042876.01.T01:intron 25.0%
!! ACTTTTGAACTTTAGATCAT+AGG - Chr8:15271006-15271025 MsG0880042876.01.T01:intron 25.0%
!! ATGATGAGGAAGATATTTTA+TGG + Chr8:15272324-15272343 None:intergenic 25.0%
!! ATTTGAGATTTACCTAAAGA+GGG - Chr8:15274410-15274429 MsG0880042876.01.T01:intron 25.0%
!! CTCGATTTTATCTAAATAAG+CGG - Chr8:15271501-15271520 MsG0880042876.01.T01:intron 25.0%
!! GATATGAGTTTAATTAGCTT+GGG - Chr8:15274345-15274364 MsG0880042876.01.T01:intron 25.0%
!! TAACCTTTGAGAATAAAACT+GGG - Chr8:15271946-15271965 MsG0880042876.01.T01:intron 25.0%
!! TATTTTATGGGAGAATTATG+AGG + Chr8:15272311-15272330 None:intergenic 25.0%
!! TGATGAGGAAGATATTTTAT+GGG + Chr8:15272323-15272342 None:intergenic 25.0%
!! TTCATTTTCATCATTGTTGT+TGG + Chr8:15274164-15274183 None:intergenic 25.0%
!!! AAATGTTATTTTGTGTCATG+GGG + Chr8:15270820-15270839 None:intergenic 25.0%
!!! ATATTACCTCTGTCTTTTTT+TGG + Chr8:15270113-15270132 None:intergenic 25.0%
!!! ATGGTTTTGTTTTTGTCTTT+AGG - Chr8:15272209-15272228 MsG0880042876.01.T01:intron 25.0%
!!! ATTCAACTTTTGTTGGTAAT+TGG + Chr8:15269988-15270007 None:intergenic 25.0%
!!! CCTAAGTAGATTTCTTTTTT+AGG - Chr8:15268671-15268690 MsG0880042876.01.T01:CDS 25.0%
!!! CTGAATTTTGAAGATAGAAA+TGG - Chr8:15273250-15273269 MsG0880042876.01.T01:intron 25.0%
!!! GAAAATGTTATTTTGTGTCA+TGG + Chr8:15270822-15270841 None:intergenic 25.0%
!!! GAAGGTATTGAATGTAATAA+TGG - Chr8:15270219-15270238 MsG0880042876.01.T01:intron 25.0%
!!! TATTACCTCTGTCTTTTTTT+GGG + Chr8:15270112-15270131 None:intergenic 25.0%
!!! TCATCATATACCATTTTTCT+TGG - Chr8:15272337-15272356 MsG0880042876.01.T01:intron 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG - Chr8:15269636-15269655 MsG0880042876.01.T01:CDS 25.0%
!!! TGGTTTTGTTTTTGTCTTTA+GGG - Chr8:15272210-15272229 MsG0880042876.01.T01:intron 25.0%
!!! TTTAGGTTATTTCTAATGGT+TGG + Chr8:15268274-15268293 None:intergenic 25.0%
AAAGAGAAAAAACTTGATGC+TGG - Chr8:15273352-15273371 MsG0880042876.01.T01:intron 30.0%
AAAGAGGGAAATGAAATTCA+TGG - Chr8:15274425-15274444 MsG0880042876.01.T01:intron 30.0%
AACATCAACAAGATTTGAAG+AGG - Chr8:15274074-15274093 MsG0880042876.01.T01:intron 30.0%
AATTGAGGATTAAAGATGGT+AGG + Chr8:15268248-15268267 None:intergenic 30.0%
AATTTAGCCCAATTCAACTA+AGG + Chr8:15268747-15268766 None:intergenic 30.0%
ACCATCTTTAATCCTCAATT+TGG - Chr8:15268248-15268267 MsG0880042876.01.T01:three_prime_UTR 30.0%
ACTCTATTTATTGTCATTGC+GGG - Chr8:15268874-15268893 MsG0880042876.01.T01:CDS 30.0%
AGAAGGGAAAATAATGTTTG+TGG + Chr8:15271976-15271995 None:intergenic 30.0%
AGCAACTCTAAATGGAATAT+AGG - Chr8:15268304-15268323 MsG0880042876.01.T01:three_prime_UTR 30.0%
ATACATTATGAGCAAACTCA+TGG + Chr8:15271188-15271207 None:intergenic 30.0%
ATAGGTTGTTTATAGATTGG+AGG - Chr8:15273419-15273438 MsG0880042876.01.T01:intron 30.0%
ATCCATCGAAATTGATATCA+AGG - Chr8:15268582-15268601 MsG0880042876.01.T01:CDS 30.0%
ATCCTTGATATCAATTTCGA+TGG + Chr8:15268587-15268606 None:intergenic 30.0%
CAAAGCTATGTTATGACAAA+AGG - Chr8:15273313-15273332 MsG0880042876.01.T01:intron 30.0%
CATGAATCTATCTCTTCAAA+TGG + Chr8:15271127-15271146 None:intergenic 30.0%
CATTGAGTAGTTAATGTATC+TGG - Chr8:15269562-15269581 MsG0880042876.01.T01:CDS 30.0%
CCAAATAAGCACATTATTCA+TGG - Chr8:15271865-15271884 MsG0880042876.01.T01:intron 30.0%
CCATGAATAATGTGCTTATT+TGG + Chr8:15271868-15271887 None:intergenic 30.0%
CTACTCAATGAACCTAAAAA+AGG + Chr8:15269552-15269571 None:intergenic 30.0%
CTTCTCTTAGTCAAATATGA+AGG - Chr8:15272240-15272259 MsG0880042876.01.T01:intron 30.0%
GAAGATAGAGAGAAATTAGA+AGG + Chr8:15272773-15272792 None:intergenic 30.0%
GAAGTGTATATTACATGAAG+AGG + Chr8:15271105-15271124 None:intergenic 30.0%
GATTCAACATCAAATGAGAA+AGG - Chr8:15273220-15273239 MsG0880042876.01.T01:intron 30.0%
GGAGATTTAGATACTCTTAT+TGG - Chr8:15273281-15273300 MsG0880042876.01.T01:intron 30.0%
GTAATTTCATGAAAATCGCT+TGG - Chr8:15269141-15269160 MsG0880042876.01.T01:CDS 30.0%
GTTTACCTAAAAACAACACA+AGG + Chr8:15272140-15272159 None:intergenic 30.0%
TCATTTGATGTTGAATCAAG+TGG + Chr8:15273217-15273236 None:intergenic 30.0%
TGAATAATGTGCTTATTTGG+GGG + Chr8:15271865-15271884 None:intergenic 30.0%
TGAATTTCATTTCCCTCTTT+AGG + Chr8:15274425-15274444 None:intergenic 30.0%
TTCAACAAGTGATGATAACT+TGG - Chr8:15273978-15273997 MsG0880042876.01.T01:intron 30.0%
TTCATCTCCTTAGTTGAATT+GGG - Chr8:15268737-15268756 MsG0880042876.01.T01:CDS 30.0%
TTCGTATGCTTCTTACATTT+GGG - Chr8:15268936-15268955 MsG0880042876.01.T01:CDS 30.0%
TTGACAGACACTGTTATAAA+AGG - Chr8:15269943-15269962 MsG0880042876.01.T01:CDS 30.0%
TTGTATTAGAGAGAGATAGA+TGG - Chr8:15270245-15270264 MsG0880042876.01.T01:intron 30.0%
TTTCATCTCCTTAGTTGAAT+TGG - Chr8:15268736-15268755 MsG0880042876.01.T01:CDS 30.0%
TTTCCATTTCATCAATATGG+TGG - Chr8:15273658-15273677 MsG0880042876.01.T01:CDS 30.0%
! ATGTGTACGAAAAACTTTTG+CGG + Chr8:15269297-15269316 None:intergenic 30.0%
! CTAACCTTTGAGAATAAAAC+TGG - Chr8:15271945-15271964 MsG0880042876.01.T01:intron 30.0%
! CTTTTGTCATAACATAGCTT+TGG + Chr8:15273315-15273334 None:intergenic 30.0%
! GAAGAAGCTTCAATGATTTT+TGG - Chr8:15274108-15274127 MsG0880042876.01.T01:intron 30.0%
! TATTCCATTTAGAGTTGCTA+AGG + Chr8:15268303-15268322 None:intergenic 30.0%
! TCTATTTTCCCTCAAATCTA+TGG + Chr8:15270138-15270157 None:intergenic 30.0%
! TGAATTGGGCTAAATTGTTT+TGG - Chr8:15268751-15268770 MsG0880042876.01.T01:CDS 30.0%
! TGATGATGATAATGAGAAAC+AGG + Chr8:15273859-15273878 None:intergenic 30.0%
! TGTTGATTAGGAAGAAAGAA+AGG + Chr8:15273502-15273521 None:intergenic 30.0%
! TTATGATGATGAGTTGTTGA+AGG + Chr8:15272803-15272822 None:intergenic 30.0%
!! ACTTTGACTTTTCTTCAGAA+TGG - Chr8:15269012-15269031 MsG0880042876.01.T01:CDS 30.0%
!! TACTTTTCAGCATGTTGTTT+TGG + Chr8:15273190-15273209 None:intergenic 30.0%
!! TGTTCTTTTTCATGTGTACT+AGG + Chr8:15273109-15273128 None:intergenic 30.0%
!!! AAACCCAGTTTTATTCTCAA+AGG + Chr8:15271952-15271971 None:intergenic 30.0%
!!! ATTACCTCTGTCTTTTTTTG+GGG + Chr8:15270111-15270130 None:intergenic 30.0%
!!! GTTGTTTTGGTATAACCAAA+CGG + Chr8:15273177-15273196 None:intergenic 30.0%
AAAATACTAAGGGGTCCTAA+AGG - Chr8:15270549-15270568 MsG0880042876.01.T01:intron 35.0%
AAAGAGGTTCATGTAAGAGT+CGG + Chr8:15272268-15272287 None:intergenic 35.0%
AAATTGTATATGATGAGGGG+AGG + Chr8:15272510-15272529 None:intergenic 35.0%
AACCAACAATAACCACAACT+TGG - Chr8:15272157-15272176 MsG0880042876.01.T01:intron 35.0%
AATGAGCTTCCAAAGCATAA+AGG + Chr8:15268802-15268821 None:intergenic 35.0%
ACCATCACTTCAACATTTGA+AGG - Chr8:15274020-15274039 MsG0880042876.01.T01:intron 35.0%
ACCTTCAAATGTTGAAGTGA+TGG + Chr8:15274024-15274043 None:intergenic 35.0%
AGACAAAAACAAAACCATGG+TGG + Chr8:15272207-15272226 None:intergenic 35.0%
AGAGAACATGAAGTAGAAGA+TGG + Chr8:15270467-15270486 None:intergenic 35.0%
AGAGAGAGAGAGAGATAAAA+AGG + Chr8:15272083-15272102 None:intergenic 35.0%
AGGGTTACTATACATTTACG+TGG + Chr8:15271896-15271915 None:intergenic 35.0%
AGTGATGGTACTATTGAAGA+AGG + Chr8:15274009-15274028 None:intergenic 35.0%
AGTTGCTAAGGACAATGTTT+AGG + Chr8:15268291-15268310 None:intergenic 35.0%
ATCAATCTATCTATCCACCA+TGG - Chr8:15272190-15272209 MsG0880042876.01.T01:intron 35.0%
ATGTAGTCACTTACTCTAGA+AGG + Chr8:15268425-15268444 None:intergenic 35.0%
ATTTCTTGGAGAAATTCTCG+AGG - Chr8:15268452-15268471 MsG0880042876.01.T01:three_prime_UTR 35.0%
CAAGAGGAGAAAATGGAAAA+TGG - Chr8:15274376-15274395 MsG0880042876.01.T01:intron 35.0%
CAATATTCTATTAGATGGGG+AGG - Chr8:15273523-15273542 MsG0880042876.01.T01:intron 35.0%
CAGCTAATTACCTTTCCTTA+CGG - Chr8:15270330-15270349 MsG0880042876.01.T01:intron 35.0%
CATCAACAAAATCAATGGCT+AGG - Chr8:15272851-15272870 MsG0880042876.01.T01:intron 35.0%
CCTCCTTATCAACTAGAAAT+GGG - Chr8:15271413-15271432 MsG0880042876.01.T01:intron 35.0%
GAACAAAGATTCTCATACGT+AGG + Chr8:15268837-15268856 None:intergenic 35.0%
GACATTGTTTCATTTCAACG+CGG - Chr8:15273376-15273395 MsG0880042876.01.T01:intron 35.0%
GATAGAGAGAAATTAGAAGG+TGG + Chr8:15272770-15272789 None:intergenic 35.0%
GATTTCATGGAATTGTCACT+AGG - Chr8:15273004-15273023 MsG0880042876.01.T01:intron 35.0%
GCAAAAAGGTTAAGGTTGTT+TGG - Chr8:15273928-15273947 MsG0880042876.01.T01:intron 35.0%
GCCAAATTGAGGATTAAAGA+TGG + Chr8:15268252-15268271 None:intergenic 35.0%
GCTACTACTAGTACTACTAA+TGG - Chr8:15273901-15273920 MsG0880042876.01.T01:intron 35.0%
GCTATGTTATGACAAAAGGT+TGG - Chr8:15273317-15273336 MsG0880042876.01.T01:intron 35.0%
GGCATAGGTTGTTTATAGAT+TGG - Chr8:15273416-15273435 MsG0880042876.01.T01:intron 35.0%
GGGTTACTATACATTTACGT+GGG + Chr8:15271895-15271914 None:intergenic 35.0%
GGTTACTATACATTTACGTG+GGG + Chr8:15271894-15271913 None:intergenic 35.0%
GTTACTATACATTTACGTGG+GGG + Chr8:15271893-15271912 None:intergenic 35.0%
GTTCGTATGCTTCTTACATT+TGG - Chr8:15268935-15268954 MsG0880042876.01.T01:CDS 35.0%
GTTTCTTAACATGTGCCATA+AGG - Chr8:15269889-15269908 MsG0880042876.01.T01:CDS 35.0%
TAACAGAAGGTGATCAGATA+GGG - Chr8:15270272-15270291 MsG0880042876.01.T01:intron 35.0%
TAAGGTTTACGCGATGATTA+TGG - Chr8:15268496-15268515 MsG0880042876.01.T01:three_prime_UTR 35.0%
TCCTCCTTATCAACTAGAAA+TGG - Chr8:15271412-15271431 MsG0880042876.01.T01:intron 35.0%
TCTCATTATCATCATCACCA+TGG - Chr8:15273862-15273881 MsG0880042876.01.T01:intron 35.0%
TGATAAGGAGGAAGAAACTA+GGG + Chr8:15271404-15271423 None:intergenic 35.0%
TTACTATACATTTACGTGGG+GGG + Chr8:15271892-15271911 None:intergenic 35.0%
TTCCAAGTTGTGGTTATTGT+TGG + Chr8:15272162-15272181 None:intergenic 35.0%
TTGATAAGGAGGAAGAAACT+AGG + Chr8:15271405-15271424 None:intergenic 35.0%
TTGATGAACTTGTGTCCTTA+TGG + Chr8:15269907-15269926 None:intergenic 35.0%
TTGTCCTTAGCAACTCTAAA+TGG - Chr8:15268296-15268315 MsG0880042876.01.T01:three_prime_UTR 35.0%
TTTACGCGATGATTATGGAA+TGG - Chr8:15268501-15268520 MsG0880042876.01.T01:three_prime_UTR 35.0%
TTTGAGTCAAGAGGAGAAAA+TGG - Chr8:15274369-15274388 MsG0880042876.01.T01:intron 35.0%
! TGACTTTTCTTCAGAATGGT+TGG - Chr8:15269016-15269035 MsG0880042876.01.T01:CDS 35.0%
! TGTGTACGAAAAACTTTTGC+GGG + Chr8:15269296-15269315 None:intergenic 35.0%
! TTCTTATATTTGAGACCGGA+GGG - Chr8:15269640-15269659 MsG0880042876.01.T01:CDS 35.0%
! TTCTTATATTTGAGACCGGA+GGG + Chr8:15269659-15269640 None:intergenic 35.0%
! TTTAGTTTCCCAACATCACT+TGG + Chr8:15273154-15273173 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - Chr8:15269639-15269658 MsG0880042876.01.T01:CDS 35.0%
! TTTCTTATATTTGAGACCGG+AGG + Chr8:15269658-15269639 None:intergenic 35.0%
!! GAAAGTGTTTCTTCATGATG+AGG + Chr8:15274048-15274067 None:intergenic 35.0%
!! GAAATCTACTTAGGTTGGTT+TGG + Chr8:15268665-15268684 None:intergenic 35.0%
!! TCTTGTTGTTCTTGTTGAAC+AGG + Chr8:15273073-15273092 None:intergenic 35.0%
!! TTATTTGGTTGCCGATTCTA+AGG - Chr8:15268478-15268497 MsG0880042876.01.T01:three_prime_UTR 35.0%
!!! ACACACCTTGTGTTGTTTTT+AGG - Chr8:15272132-15272151 MsG0880042876.01.T01:intron 35.0%
!!! TCCTTTTTTTCTTCCTTTGC+AGG - Chr8:15268385-15268404 MsG0880042876.01.T01:three_prime_UTR 35.0%
AAACTAGGGTTACAAGAGAG+AGG + Chr8:15271390-15271409 None:intergenic 40.0%
AATCATTACCCTGAAGACAC+TGG - Chr8:15268171-15268190 MsG0880042876.01.T01:three_prime_UTR 40.0%
AATTACCTTTCCTTACGGCT+GGG - Chr8:15270335-15270354 MsG0880042876.01.T01:intron 40.0%
AATTCAGCAGCATCTAAAGG+AGG - Chr8:15272911-15272930 MsG0880042876.01.T01:intron 40.0%
ACTTTCCTTTACTACACCGT+TGG - Chr8:15270433-15270452 MsG0880042876.01.T01:intron 40.0%
AGCATAAAGGACTTGGAAGA+AGG + Chr8:15268789-15268808 None:intergenic 40.0%
AGTACAAGACAGCAACAAGA+AGG - Chr8:15273784-15273803 MsG0880042876.01.T01:intron 40.0%
CAACACAGCACACAATCAAT+GGG - Chr8:15270369-15270388 MsG0880042876.01.T01:intron 40.0%
CAATCCCCAAAAAAAGACAG+AGG - Chr8:15270104-15270123 MsG0880042876.01.T01:intron 40.0%
CACAATTCAGCAGCATCTAA+AGG - Chr8:15272908-15272927 MsG0880042876.01.T01:intron 40.0%
CAGCATCTAAAGGAGGATTA+GGG - Chr8:15272918-15272937 MsG0880042876.01.T01:intron 40.0%
CATCGCGTAAACCTTAGAAT+CGG + Chr8:15268492-15268511 None:intergenic 40.0%
CATTGAGCAATCTTCACACT+TGG + Chr8:15271723-15271742 None:intergenic 40.0%
CCACCACCATATTGATGAAA+TGG + Chr8:15273664-15273683 None:intergenic 40.0%
CCATTTCATCAATATGGTGG+TGG - Chr8:15273661-15273680 MsG0880042876.01.T01:CDS 40.0%
CCTTATCAACTAGAAATGGG+TGG - Chr8:15271416-15271435 MsG0880042876.01.T01:intron 40.0%
CTGTAACACCAAGTGATGTT+GGG - Chr8:15273143-15273162 MsG0880042876.01.T01:intron 40.0%
CTTCCAAAGCATAAAGGACT+TGG + Chr8:15268796-15268815 None:intergenic 40.0%
CTTCCAAGTCCTTTATGCTT+TGG - Chr8:15268790-15268809 MsG0880042876.01.T01:CDS 40.0%
GAAGATGGATAGAATGCCAA+CGG + Chr8:15270452-15270471 None:intergenic 40.0%
GATAGATGGAGAGTAACAGA+AGG - Chr8:15270259-15270278 MsG0880042876.01.T01:intron 40.0%
GCCTGCAAAGGAAGAAAAAA+AGG + Chr8:15268389-15268408 None:intergenic 40.0%
GCTAACTAGTTACTTCACAC+AGG + Chr8:15272033-15272052 None:intergenic 40.0%
GGAGAATTATGAGGCTGTAA+AGG + Chr8:15272302-15272321 None:intergenic 40.0%
GTAACAGAAGGTGATCAGAT+AGG - Chr8:15270271-15270290 MsG0880042876.01.T01:intron 40.0%
GTTTGCCTTCATACTTCTAC+AGG - Chr8:15268958-15268977 MsG0880042876.01.T01:CDS 40.0%
TAACTATGAACTACTCCCTC+CGG - Chr8:15269505-15269524 MsG0880042876.01.T01:CDS 40.0%
TAATTACCTTTCCTTACGGC+TGG - Chr8:15270334-15270353 MsG0880042876.01.T01:intron 40.0%
TGCTGATGTTGTAACCTTTG+TGG + Chr8:15273586-15273605 None:intergenic 40.0%
TGTTGGGAAACTAAACCGTT+TGG - Chr8:15273159-15273178 MsG0880042876.01.T01:intron 40.0%
TGTTGTAACCTTTGTGGTGT+TGG + Chr8:15273580-15273599 None:intergenic 40.0%
TGTTGTTCTTGTTGAACAGG+AGG + Chr8:15273070-15273089 None:intergenic 40.0%
TTCAGAATGGTTGGAGTCAT+GGG - Chr8:15269025-15269044 MsG0880042876.01.T01:CDS 40.0%
TTCCTTATCCAACACCACAA+AGG - Chr8:15273569-15273588 MsG0880042876.01.T01:intron 40.0%
TTTGCGGGACTAAAAGTCAA+TGG + Chr8:15269281-15269300 None:intergenic 40.0%
! AAAGGAAAGTGCACAGTGTT+AGG + Chr8:15270423-15270442 None:intergenic 40.0%
! AACCTTTGTGGTGTTGGATA+AGG + Chr8:15273574-15273593 None:intergenic 40.0%
! TCTAATGGTTGGCCAAATTG+AGG + Chr8:15268263-15268282 None:intergenic 40.0%
!! AAGGTTGTTTGGTGTGAACA+TGG - Chr8:15273939-15273958 MsG0880042876.01.T01:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - Chr8:15269748-15269767 MsG0880042876.01.T01:CDS 40.0%
!! AGAGGATTTTGAGTGCATTG+TGG + Chr8:15271087-15271106 None:intergenic 40.0%
!! ATCTACTTAGGTTGGTTTGG+TGG + Chr8:15268662-15268681 None:intergenic 40.0%
!! ATGGTGCTGCAAAAAGGTTA+AGG - Chr8:15273920-15273939 MsG0880042876.01.T01:intron 40.0%
!! CATTAACTTGTGTGCCTTGA+GGG + Chr8:15269765-15269784 None:intergenic 40.0%
!! CCACCCATTTCTAGTTGATA+AGG + Chr8:15271419-15271438 None:intergenic 40.0%
!! CCCATTTCTAGTTGATAAGG+AGG + Chr8:15271416-15271435 None:intergenic 40.0%
!! CTACTAATGGTGCTGCAAAA+AGG - Chr8:15273914-15273933 MsG0880042876.01.T01:intron 40.0%
!! GTGAAAAGTGTTGCTGATGA+AGG + Chr8:15273478-15273497 None:intergenic 40.0%
!! TCATTAACTTGTGTGCCTTG+AGG + Chr8:15269766-15269785 None:intergenic 40.0%
!!! GTGTTTTGACTCATGCCTTT+AGG + Chr8:15270567-15270586 None:intergenic 40.0%
ACAAGACAGCAACAAGAAGG+AGG - Chr8:15273787-15273806 MsG0880042876.01.T01:intron 45.0%
AGCTTGGGATTTGAGTCAAG+AGG - Chr8:15274360-15274379 MsG0880042876.01.T01:intron 45.0%
AGGTTGTTGCATCTTGATGC+TGG + Chr8:15272958-15272977 None:intergenic 45.0%
CATGCTAACCAGTGTCTTCA+GGG + Chr8:15268182-15268201 None:intergenic 45.0%
CCAACACAGCACACAATCAA+TGG - Chr8:15270368-15270387 MsG0880042876.01.T01:intron 45.0%
CTTCAGAATGGTTGGAGTCA+TGG - Chr8:15269024-15269043 MsG0880042876.01.T01:CDS 45.0%
CTTGTACTCAAGCTTCCTTG+AGG + Chr8:15273772-15273791 None:intergenic 45.0%
GAATGCCAACGGTGTAGTAA+AGG + Chr8:15270441-15270460 None:intergenic 45.0%
GCAGCATCTAAAGGAGGATT+AGG - Chr8:15272917-15272936 MsG0880042876.01.T01:intron 45.0%
GCCTTCATACTTCTACAGGT+TGG - Chr8:15268962-15268981 MsG0880042876.01.T01:CDS 45.0%
GCTGCTGAATTGTGAGATTC+TGG + Chr8:15272902-15272921 None:intergenic 45.0%
GCTGTAACACCAAGTGATGT+TGG - Chr8:15273142-15273161 MsG0880042876.01.T01:intron 45.0%
GTTCTCCTCATCAAAGTCTC+AGG + Chr8:15268617-15268636 None:intergenic 45.0%
TCATGCTAACCAGTGTCTTC+AGG + Chr8:15268183-15268202 None:intergenic 45.0%
TCGAACCTGAGACTTTGATG+AGG - Chr8:15268609-15268628 MsG0880042876.01.T01:CDS 45.0%
TCGGCGAATTGTTTAGGCAT+AGG - Chr8:15273401-15273420 MsG0880042876.01.T01:intron 45.0%
TTGCATCTTGATGCTGGTGA+TGG + Chr8:15272952-15272971 None:intergenic 45.0%
TTTGATGAGGAGAACCCTTC+AGG - Chr8:15268622-15268641 MsG0880042876.01.T01:CDS 45.0%
! CCATTGATTGTGTGCTGTGT+TGG + Chr8:15270371-15270390 None:intergenic 45.0%
! GCCAACCTGTAGAAGTATGA+AGG + Chr8:15268966-15268985 None:intergenic 45.0%
! TTTGGTGTGAACATGGAGTG+TGG - Chr8:15273946-15273965 MsG0880042876.01.T01:intron 45.0%
!! CTTCCTTGAGGCATTGATGA+TGG + Chr8:15273760-15273779 None:intergenic 45.0%
!! TGGTTTGGTGGTGTTGGTTT+GGG + Chr8:15268650-15268669 None:intergenic 45.0%
!! TGTTGGTTTGGGATCCTGAA+GGG + Chr8:15268639-15268658 None:intergenic 45.0%
!! TTAGGTTGGTTTGGTGGTGT+TGG + Chr8:15268656-15268675 None:intergenic 45.0%
!! TTGGTTTGGTGGTGTTGGTT+TGG + Chr8:15268651-15268670 None:intergenic 45.0%
!! AAAATATATAAACAAAAAAA+AGG + Chr8:15272485-15272504 None:intergenic 5.0%
!! ATAATCATATATATATATAA+AGG - Chr8:15270916-15270935 MsG0880042876.01.T01:intron 5.0%
!! TATATTGTTTAATTAAATAA+AGG + Chr8:15270844-15270863 None:intergenic 5.0%
AGACAGCAACAAGAAGGAGG+AGG - Chr8:15273790-15273809 MsG0880042876.01.T01:intron 50.0%
CAGAAGGTGATCAGATAGGG+TGG - Chr8:15270275-15270294 MsG0880042876.01.T01:intron 50.0%
GCACCATCATCAATGCCTCA+AGG - Chr8:15273754-15273773 MsG0880042876.01.T01:intron 50.0%
GTTTCATTTCAACGCGGCGT+CGG - Chr8:15273382-15273401 MsG0880042876.01.T01:intron 50.0%
!! GTGTTGGTTTGGGATCCTGA+AGG + Chr8:15268640-15268659 None:intergenic 50.0%
!! TGAGGCATTGATGATGGTGC+TGG + Chr8:15273754-15273773 None:intergenic 50.0%
AAGCAGACAGACCTCTCTGC+AGG + Chr8:15270301-15270320 None:intergenic 55.0%
ACCTTTCCTTACGGCTGGGA+TGG - Chr8:15270339-15270358 MsG0880042876.01.T01:intron 55.0%
CAACAAGAAGGAGGAGGAGG+AGG - Chr8:15273796-15273815 MsG0880042876.01.T01:intron 55.0%
CAGCAACAAGAAGGAGGAGG+AGG - Chr8:15273793-15273812 MsG0880042876.01.T01:intron 55.0%
CCTTTCCTTACGGCTGGGAT+GGG - Chr8:15270340-15270359 MsG0880042876.01.T01:intron 55.0%
GGTGTGAACATGGAGTGTGG+TGG - Chr8:15273949-15273968 MsG0880042876.01.T01:intron 55.0%
AGATAGGGTGGCCTGCAGAG+AGG - Chr8:15270287-15270306 MsG0880042876.01.T01:intron 60.0%
CAAGAAGGAGGAGGAGGAGG+AGG - Chr8:15273799-15273818 MsG0880042876.01.T01:intron 60.0%
CCCATCCCAGCCGTAAGGAA+AGG + Chr8:15270343-15270362 None:intergenic 60.0%
TCCTTACGGCTGGGATGGGA+GGG - Chr8:15270344-15270363 MsG0880042876.01.T01:intron 60.0%
TTCCTTACGGCTGGGATGGG+AGG - Chr8:15270343-15270362 MsG0880042876.01.T01:intron 60.0%
!! GCGGCGTCGGCGAATTGTTT+AGG - Chr8:15273395-15273414 MsG0880042876.01.T01:intron 60.0%
TCCCTCCCATCCCAGCCGTA+AGG + Chr8:15270348-15270367 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 15268129 15274570 15268129 ID=MsG0880042876.01;Name=MsG0880042876.01
Chr8 mRNA 15268129 15274570 15268129 ID=MsG0880042876.01.T01;Parent=MsG0880042876.01;Name=MsG0880042876.01.T01;_AED=0.47;_eAED=0.48;_QI=0|0|0.33|0.66|1|1|3|397|572
Chr8 exon 15268129 15270113 15268129 ID=MsG0880042876.01.T01:exon:36986;Parent=MsG0880042876.01.T01
Chr8 exon 15273653 15273719 15273653 ID=MsG0880042876.01.T01:exon:36985;Parent=MsG0880042876.01.T01
Chr8 exon 15274507 15274570 15274507 ID=MsG0880042876.01.T01:exon:36984;Parent=MsG0880042876.01.T01
Chr8 CDS 15274507 15274570 15274507 ID=MsG0880042876.01.T01:cds;Parent=MsG0880042876.01.T01
Chr8 CDS 15273653 15273719 15273653 ID=MsG0880042876.01.T01:cds;Parent=MsG0880042876.01.T01
Chr8 CDS 15268526 15270113 15268526 ID=MsG0880042876.01.T01:cds;Parent=MsG0880042876.01.T01
Chr8 three_prime_UTR 15268129 15268525 15268129 ID=MsG0880042876.01.T01:three_prime_utr;Parent=MsG0880042876.01.T01
Gene Sequence

>MsG0880042876.01.T01

ATGGAGTATTTTCAAGACAAATTTTATATTTATAGATTCTTTAATCATTACCCTGAAGACACTGGTTGGCGTATTGATACTTCTTCTTTGTTGTATACTTTGACTTTTCTTCAGAATGGTTGGAGTCATGGATTTTGTGAGATCCAAGAAGAATTTGACTTGATAATTATCATGGAGTTGATGCAAGAAGTGAAAGATTATTCACAAGAAGAATTAGAGGAAGATGAAGAAGAAATCATGACAAAAACAACAAGAGAAGAAGAAGAAGAAAGTAGTAGTAAGCAACAATTACAACACTGTACTTTTTCTTCTCCACCTTCTAATTTCTCTCTATCTTCTTCATCTCCTTCAACAACTCATCATCATAATCATAATCATGATGTTACAAATGTTTCTCATCAACAAAATCAATGGCTAGGAATGAATCATCATCATCATCATTCACCAGAATCTCACAATTCAGCAGCATCTAAAGGAGGATTAGGGTTATTACACCATCACCAGCATCAAGATGCAACAACCTCAAATTTCACAAATTTAAAGCAAATAGATTTCATGGAATTGTCACTAGGTAACAACAATAACAAAAACAAAGATGTTGTTATTAATGTTCCTCCTGTTCAACAAGAACAACAAGAACAAGAACAACAACCTAGTACACATGAAAAAGAACACATGTTTGACAAAGCTGTAACACCAAGTGATGTTGGGAAACTAAACCGTTTGGTTATACCAAAACAACATGCTGAAAAGTATTTTCCACTTGATTCAACATCAAATGAGAAAGGTCTTCTTCTGAATTTTGAAGATAGAAATGGAAAATTGTGGAGATTTAGATACTCTTATTGGAACAGTAGCCAAAGCTATGTTATGACAAAAGGTTGGAGCCGTTTTGTTAAAGAGAAAAAACTTGATGCTGGTGACATTGTTTCATTTCAACGCGGCGTCGGCGAATTGTTTAGGCATAGGTTGTTTATAGATTGGAGGAGAAGATCTAATCATAATCATCATAATATTGATCCTTCATCAGCAACACTTTTCACTCCTTTCTTTCTTCCTAATCAACAACAATATTCTATTAGATGGGGAGGTGCTAATAGTAGATTTTACTCTCTTCCTTATCCAACACCACAAAGGTTACAACATCAGCAACAAAATCATCATGACCCTTTACACAATCAGATGAATTTTAATCATAACATGTTTCCATTTCATCAATATGGTGGTGGAAATGTGAATCATCAATACAATTTTCATCATCATGATCCAAGTTCAGTTTTTTATATGAGATCATTACCAGCACCATCATCAATGCCTCAAGGAAGCTTGAGTACAAGACAGCAACAAGAAGGAGGAGGAGGAGGAGGAAGCAATGTCTCAAACATGATTATTGATTCTGTTCCTGTTTCTCATTATCATCATCACCATGGAAATTTAACTAGTAATGCTACTACTAGTACTACTAATGGTGCTGCAAAAAGGTTAAGGTTGTTTGGTGTGAACATGGAGTGTGGTGGTTCTTCTTCAACAAGTGATGATAACTTGGCTTCTCCTTCTTCAATAGTACCATCACTTCAACATTTGAAGGTACCTCATCATGAAGAAACACTTTCAAGTTCAACATCAACAAGATTTGAAGAGGATAAGAGAAGAGAAGAAGCTTCAATGATTTTTGGTTTAGATACTTCTTTGCAATATCATAATTACCAACAACAATGA

Protein sequence

>MsG0880042876.01.T01

MEYFQDKFYIYRFFNHYPEDTGWRIDTSSLLYTLTFLQNGWSHGFCEIQEEFDLIIIMELMQEVKDYSQEELEEDEEEIMTKTTREEEEESSSKQQLQHCTFSSPPSNFSLSSSSPSTTHHHNHNHDVTNVSHQQNQWLGMNHHHHHSPESHNSAASKGGLGLLHHHQHQDATTSNFTNLKQIDFMELSLGNNNNKNKDVVINVPPVQQEQQEQEQQPSTHEKEHMFDKAVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELFRHRLFIDWRRRSNHNHHNIDPSSATLFTPFFLPNQQQYSIRWGGANSRFYSLPYPTPQRLQHQQQNHHDPLHNQMNFNHNMFPFHQYGGGNVNHQYNFHHHDPSSVFYMRSLPAPSSMPQGSLSTRQQQEGGGGGGSNVSNMIIDSVPVSHYHHHHGNLTSNATTSTTNGAAKRLRLFGVNMECGGSSSTSDDNLASPSSIVPSLQHLKVPHHEETLSSSTSTRFEEDKRREEASMIFGLDTSLQYHNYQQQ*