Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038321.01.T01 | XP_003622715.3 | 100 | 172 | 0 | 0 | 1 | 172 | 104 | 275 | 1.48E-117 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038321.01.T01 | A0A396GX14 | 100.000 | 172 | 0 | 0 | 1 | 172 | 104 | 275 | 7.06e-118 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048595.01 | MsG0780038321.01 | 0.825586 | 4.323781e-54 | 3.957697e-51 |
| MsG0080048597.01 | MsG0780038321.01 | 0.803195 | 3.914742e-49 | 1.955024e-46 |
| MsG0080048889.01 | MsG0780038321.01 | 0.826492 | 2.633312e-54 | 2.473210e-51 |
| MsG0080049008.01 | MsG0780038321.01 | 0.806715 | 7.190130e-50 | 3.930317e-47 |
| MsG0080049023.01 | MsG0780038321.01 | -0.813457 | 2.535339e-51 | 1.656629e-48 |
| MsG0180000002.01 | MsG0780038321.01 | 0.813148 | 2.963509e-51 | 1.919967e-48 |
| MsG0180000367.01 | MsG0780038321.01 | 0.803844 | 2.871949e-49 | 1.458412e-46 |
| MsG0180000583.01 | MsG0780038321.01 | 0.800292 | 1.543544e-48 | 7.160671e-46 |
| MsG0180000719.01 | MsG0780038321.01 | -0.815738 | 7.927812e-52 | 5.511323e-49 |
| MsG0180001054.01 | MsG0780038321.01 | -0.818035 | 2.417994e-52 | 1.789919e-49 |
| MsG0180001147.01 | MsG0780038321.01 | -0.818525 | 1.873273e-52 | 1.405605e-49 |
| MsG0180003238.01 | MsG0780038321.01 | 0.829723 | 4.389108e-55 | 4.529962e-52 |
| MsG0180004124.01 | MsG0780038321.01 | -0.814539 | 1.463616e-51 | 9.847569e-49 |
| MsG0180004125.01 | MsG0780038321.01 | -0.816993 | 4.151475e-52 | 2.986929e-49 |
| MsG0180004322.01 | MsG0780038321.01 | -0.828269 | 9.873735e-55 | 9.765532e-52 |
| MsG0180004580.01 | MsG0780038321.01 | -0.801638 | 8.192646e-49 | 3.932213e-46 |
| MsG0180004581.01 | MsG0780038321.01 | -0.812890 | 3.376101e-51 | 2.172284e-48 |
| MsG0180004737.01 | MsG0780038321.01 | -0.801740 | 7.807168e-49 | 3.756813e-46 |
| MsG0180005819.01 | MsG0780038321.01 | 0.820690 | 6.003915e-53 | 4.783612e-50 |
| MsG0180005833.01 | MsG0780038321.01 | -0.813425 | 2.576067e-51 | 1.681712e-48 |
| MsG0180005984.01 | MsG0780038321.01 | 0.807436 | 5.059232e-50 | 2.817741e-47 |
| MsG0280006381.01 | MsG0780038321.01 | -0.810888 | 9.215548e-51 | 5.622389e-48 |
| MsG0280010994.01 | MsG0780038321.01 | -0.817557 | 3.100275e-52 | 2.265138e-49 |
| MsG0280011269.01 | MsG0780038321.01 | 0.809845 | 1.546838e-50 | 9.180505e-48 |
| MsG0280011281.01 | MsG0780038321.01 | -0.814633 | 1.394825e-51 | 9.408708e-49 |
| MsG0280011475.01 | MsG0780038321.01 | -0.830351 | 3.083858e-55 | 3.241018e-52 |
| MsG0380014639.01 | MsG0780038321.01 | -0.805574 | 1.249746e-49 | 6.634978e-47 |
| MsG0380014642.01 | MsG0780038321.01 | -0.813656 | 2.292252e-51 | 1.505817e-48 |
| MsG0380014735.01 | MsG0780038321.01 | -0.817288 | 3.564781e-52 | 2.585299e-49 |
| MsG0680030875.01 | MsG0780038321.01 | -0.801147 | 1.032835e-48 | 4.896481e-46 |
| MsG0680031204.01 | MsG0780038321.01 | -0.821859 | 3.227371e-53 | 2.657168e-50 |
| MsG0680035584.01 | MsG0780038321.01 | -0.814816 | 1.270765e-51 | 8.613976e-49 |
| MsG0480018658.01 | MsG0780038321.01 | -0.807313 | 5.371591e-50 | 2.982313e-47 |
| MsG0480020550.01 | MsG0780038321.01 | -0.805713 | 1.168872e-49 | 6.228175e-47 |
| MsG0480021151.01 | MsG0780038321.01 | -0.805052 | 1.607627e-49 | 8.421433e-47 |
| MsG0480021175.01 | MsG0780038321.01 | 0.831883 | 1.296923e-55 | 1.426250e-52 |
| MsG0480022458.01 | MsG0780038321.01 | -0.808418 | 3.127830e-50 | 1.787518e-47 |
| MsG0480023067.01 | MsG0780038321.01 | 0.809231 | 2.095519e-50 | 1.223622e-47 |
| MsG0480023103.01 | MsG0780038321.01 | -0.801979 | 6.971865e-49 | 3.375301e-46 |
| MsG0480023125.01 | MsG0780038321.01 | 0.801975 | 6.985166e-49 | 3.381396e-46 |
| MsG0480023152.01 | MsG0780038321.01 | -0.825805 | 3.837604e-54 | 3.534814e-51 |
| MsG0480023211.01 | MsG0780038321.01 | -0.810147 | 1.332184e-50 | 7.968897e-48 |
| MsG0480023244.01 | MsG0780038321.01 | -0.804245 | 2.369554e-49 | 1.215636e-46 |
| MsG0480023663.01 | MsG0780038321.01 | 0.817092 | 3.944484e-52 | 2.845480e-49 |
| MsG0480023695.01 | MsG0780038321.01 | -0.817442 | 3.291238e-52 | 2.397156e-49 |
| MsG0580024493.01 | MsG0780038321.01 | -0.817031 | 4.070905e-52 | 2.931893e-49 |
| MsG0580024688.01 | MsG0780038321.01 | -0.807454 | 5.014712e-50 | 2.794374e-47 |
| MsG0580025105.01 | MsG0780038321.01 | -0.800788 | 1.222850e-48 | 5.744429e-46 |
| MsG0580025447.01 | MsG0780038321.01 | -0.818752 | 1.664047e-52 | 1.256405e-49 |
| MsG0580026029.01 | MsG0780038321.01 | 0.817661 | 2.937445e-52 | 2.152312e-49 |
| MsG0580026073.01 | MsG0780038321.01 | -0.812972 | 3.239483e-51 | 2.088809e-48 |
| MsG0380015828.01 | MsG0780038321.01 | -0.801583 | 8.409841e-49 | 4.030789e-46 |
| MsG0380015985.01 | MsG0780038321.01 | -0.807224 | 5.612091e-50 | 3.108504e-47 |
| MsG0380016031.01 | MsG0780038321.01 | 0.810685 | 1.019507e-50 | 6.186137e-48 |
| MsG0380016456.01 | MsG0780038321.01 | -0.800291 | 1.544269e-48 | 7.163899e-46 |
| MsG0380016889.01 | MsG0780038321.01 | -0.812724 | 3.671298e-51 | 2.351966e-48 |
| MsG0380017773.01 | MsG0780038321.01 | -0.811717 | 6.087726e-51 | 3.796163e-48 |
| MsG0380017928.01 | MsG0780038321.01 | -0.814196 | 1.742411e-51 | 1.161476e-48 |
| MsG0480018201.01 | MsG0780038321.01 | -0.808265 | 3.371144e-50 | 1.918917e-47 |
| MsG0480018202.01 | MsG0780038321.01 | -0.810457 | 1.141948e-50 | 6.886663e-48 |
| MsG0480018203.01 | MsG0780038321.01 | -0.810919 | 9.072028e-51 | 5.539561e-48 |
| MsG0580026362.01 | MsG0780038321.01 | -0.811246 | 7.705360e-51 | 4.745520e-48 |
| MsG0580026492.01 | MsG0780038321.01 | 0.821544 | 3.815705e-53 | 3.113615e-50 |
| MsG0580027135.01 | MsG0780038321.01 | 0.803882 | 2.819938e-49 | 1.433398e-46 |
| MsG0580027276.01 | MsG0780038321.01 | -0.822366 | 2.461540e-53 | 2.056267e-50 |
| MsG0580028159.01 | MsG0780038321.01 | -0.802508 | 5.425932e-49 | 2.662639e-46 |
| MsG0280006534.01 | MsG0780038321.01 | -0.800593 | 1.339843e-48 | 6.263211e-46 |
| MsG0280007016.01 | MsG0780038321.01 | -0.808830 | 2.554542e-50 | 1.475625e-47 |
| MsG0280007017.01 | MsG0780038321.01 | -0.808967 | 2.387499e-50 | 1.384203e-47 |
| MsG0280007227.01 | MsG0780038321.01 | 0.800044 | 1.733029e-48 | 7.989153e-46 |
| MsG0280007653.01 | MsG0780038321.01 | -0.810133 | 1.341098e-50 | 8.019502e-48 |
| MsG0280009079.01 | MsG0780038321.01 | -0.813275 | 2.779443e-51 | 1.807017e-48 |
| MsG0280009094.01 | MsG0780038321.01 | -0.823557 | 1.299284e-53 | 1.122451e-50 |
| MsG0280009526.01 | MsG0780038321.01 | 0.828517 | 8.601957e-55 | 8.570007e-52 |
| MsG0280009742.01 | MsG0780038321.01 | -0.813419 | 2.584290e-51 | 1.686806e-48 |
| MsG0280010019.01 | MsG0780038321.01 | 0.808375 | 3.194205e-50 | 1.823430e-47 |
| MsG0780037458.01 | MsG0780038321.01 | -0.803940 | 2.742015e-49 | 1.395925e-46 |
| MsG0780038305.01 | MsG0780038321.01 | 0.816279 | 6.000739e-52 | 4.233868e-49 |
| MsG0780038321.01 | MsG0780038431.01 | 0.800628 | 1.318278e-48 | 6.167945e-46 |
| MsG0780038321.01 | MsG0780038573.01 | -0.806778 | 6.972940e-50 | 3.817815e-47 |
| MsG0780038321.01 | MsG0780039431.01 | 0.805342 | 1.398416e-49 | 7.379996e-47 |
| MsG0780038321.01 | MsG0780039836.01 | -0.814066 | 1.861645e-51 | 1.236632e-48 |
| MsG0780038321.01 | MsG0780040429.01 | -0.803528 | 3.338612e-49 | 1.681717e-46 |
| MsG0780038321.01 | MsG0780040838.01 | -0.814956 | 1.183222e-51 | 8.050694e-49 |
| MsG0780038321.01 | MsG0780041591.01 | 0.812497 | 4.115472e-51 | 2.620807e-48 |
| MsG0780038321.01 | MsG0880043472.01 | 0.831268 | 1.837958e-55 | 1.984351e-52 |
| MsG0780038321.01 | MsG0880043515.01 | -0.801210 | 1.002648e-48 | 4.760849e-46 |
| MsG0780038321.01 | MsG0880044968.01 | -0.819922 | 9.006436e-53 | 7.025227e-50 |
| MsG0780038321.01 | MsG0880045063.01 | -0.810108 | 1.357993e-50 | 8.115460e-48 |
| MsG0780038321.01 | MsG0880045369.01 | -0.823014 | 1.740109e-53 | 1.480536e-50 |
| MsG0780038321.01 | MsG0880045385.01 | -0.818343 | 2.059195e-52 | 1.537472e-49 |
| MsG0780038321.01 | MsG0880046010.01 | -0.809317 | 2.008761e-50 | 1.175596e-47 |
| MsG0780038321.01 | MsG0880046151.01 | -0.802658 | 5.053200e-49 | 2.489167e-46 |
| MsG0780038321.01 | MsG0880046174.01 | -0.808924 | 2.438411e-50 | 1.412068e-47 |
| MsG0780038321.01 | MsG0880046630.01 | -0.806358 | 8.549519e-50 | 4.630905e-47 |
| MsG0780038321.01 | MsG0880047090.01 | 0.841842 | 3.717076e-58 | 5.531061e-55 |
| MsG0780038321.01 | MsG0880047697.01 | 0.808889 | 2.480300e-50 | 1.434979e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038321.01.T01 | MTR_7g051210 | 100.000 | 172 | 0 | 0 | 1 | 172 | 25 | 196 | 9.00e-121 | 339 |
| MsG0780038321.01.T01 | MTR_3g069580 | 48.538 | 171 | 81 | 3 | 3 | 171 | 4 | 169 | 2.08e-38 | 129 |
| MsG0780038321.01.T01 | MTR_4g064923 | 42.778 | 180 | 89 | 2 | 5 | 172 | 10 | 187 | 7.63e-34 | 118 |
| MsG0780038321.01.T01 | MTR_7g005460 | 75.510 | 49 | 12 | 0 | 117 | 165 | 1 | 49 | 9.98e-19 | 76.6 |
| MsG0780038321.01.T01 | MTR_6g092500 | 79.545 | 44 | 9 | 0 | 117 | 160 | 1 | 44 | 1.19e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038321.01.T01 | AT3G07510 | 85.366 | 164 | 24 | 0 | 9 | 172 | 26 | 189 | 2.06e-88 | 257 |
| MsG0780038321.01.T01 | AT3G07510 | 85.366 | 164 | 24 | 0 | 9 | 172 | 26 | 189 | 2.06e-88 | 257 |
| MsG0780038321.01.T01 | AT3G07510 | 85.366 | 164 | 24 | 0 | 9 | 172 | 36 | 199 | 2.22e-88 | 257 |
| MsG0780038321.01.T01 | AT2G01580 | 61.006 | 159 | 62 | 0 | 12 | 170 | 31 | 189 | 3.82e-59 | 183 |
| MsG0780038321.01.T01 | AT5G05950 | 47.126 | 174 | 85 | 4 | 6 | 172 | 2 | 175 | 6.96e-43 | 141 |
| MsG0780038321.01.T01 | AT3G46890 | 40.000 | 190 | 90 | 7 | 5 | 172 | 17 | 204 | 7.91e-25 | 95.9 |
Find 34 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGATGTTGGGATCTGCTT+TGG | 0.256332 | 7:-44187315 | MsG0780038321.01.T01:CDS |
| TCTGCTTTGGGATCTGTAAT+GGG | 0.285528 | 7:-44187302 | MsG0780038321.01.T01:CDS |
| GGGATGTTGGGATCTGCTTT+GGG | 0.300771 | 7:-44187314 | MsG0780038321.01.T01:CDS |
| TGCTCATGCTGTTGCTGTTA+TGG | 0.304958 | 7:-44187201 | MsG0780038321.01.T01:CDS |
| TTCTCCAGGCTGCGTTGGCC+TGG | 0.319684 | 7:+44187524 | None:intergenic |
| ATCTGCTTTGGGATCTGTAA+TGG | 0.352823 | 7:-44187303 | MsG0780038321.01.T01:CDS |
| AATGTTATTGAGATTAGGTT+GGG | 0.375138 | 7:-44187251 | MsG0780038321.01.T01:CDS |
| CGAATACGGCGATTGTGAAA+AGG | 0.429453 | 7:+44187567 | None:intergenic |
| TCATCTTCCCTTGTTGCTCA+AGG | 0.433862 | 7:-44187422 | MsG0780038321.01.T01:CDS |
| TAGAGATAGGCCGACGAATA+CGG | 0.437603 | 7:+44187553 | None:intergenic |
| GAATACGGCGATTGTGAAAA+GGG | 0.443002 | 7:+44187568 | None:intergenic |
| AACTCCAGGCCAACGCAGCC+TGG | 0.450154 | 7:-44187528 | MsG0780038321.01.T01:CDS |
| CTTCTTTGCGACGTCGATGC+CGG | 0.473260 | 7:+44187484 | None:intergenic |
| GAATGTTATTGAGATTAGGT+TGG | 0.491944 | 7:-44187252 | MsG0780038321.01.T01:CDS |
| TGGTGAATGTTATTGAGATT+AGG | 0.494523 | 7:-44187256 | MsG0780038321.01.T01:CDS |
| TCGTGCACATATTAATCTGA+AGG | 0.516683 | 7:-44187348 | MsG0780038321.01.T01:CDS |
| TTCACAATCGCCGTATTCGT+CGG | 0.523383 | 7:-44187563 | MsG0780038321.01.T01:CDS |
| CGCAAGAGGAGCGATTCTCC+AGG | 0.526259 | 7:+44187510 | None:intergenic |
| GGCCTGGAGTTGTTAGAGAT+AGG | 0.531373 | 7:+44187540 | None:intergenic |
| AATCGCTCCTCTTGCGACGC+CGG | 0.533788 | 7:-44187503 | MsG0780038321.01.T01:CDS |
| TCTTCTCAACAGTAAGGATG+TGG | 0.538914 | 7:-44187381 | MsG0780038321.01.T01:CDS |
| GGCCTATCTCTAACAACTCC+AGG | 0.544683 | 7:-44187542 | MsG0780038321.01.T01:CDS |
| AGCGATTCTCCAGGCTGCGT+TGG | 0.549775 | 7:+44187519 | None:intergenic |
| GTCGATGCCGGCGTCGCAAG+AGG | 0.558642 | 7:+44187496 | None:intergenic |
| TTTAAGACCTTGAGCAACAA+GGG | 0.559838 | 7:+44187415 | None:intergenic |
| ACTCAATCTTCTCAACAGTA+AGG | 0.560977 | 7:-44187387 | MsG0780038321.01.T01:CDS |
| CTGCTTTGGGATCTGTAATG+GGG | 0.592904 | 7:-44187301 | MsG0780038321.01.T01:CDS |
| AGGTTGGGGATGTTGTCTTG+TGG | 0.593579 | 7:-44187236 | MsG0780038321.01.T01:CDS |
| GTTTAAGACCTTGAGCAACA+AGG | 0.593709 | 7:+44187414 | None:intergenic |
| AGATGAGAGAAAGAAGCTGA+AGG | 0.598891 | 7:+44187439 | None:intergenic |
| ATGTTATTGAGATTAGGTTG+GGG | 0.603102 | 7:-44187250 | MsG0780038321.01.T01:CDS |
| GTACACGTCACCGCATTAGA+CGG | 0.618139 | 7:-44187608 | MsG0780038321.01.T01:CDS |
| GTTGACTAGTCCGTCTAATG+CGG | 0.635569 | 7:+44187598 | None:intergenic |
| GTGTACGCTTGTTGTTGATG+AGG | 0.652825 | 7:+44187625 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATGTTATTGAGATTAGGTT+GGG | - | Chr7:44187517-44187536 | MsG0780038321.01.T01:CDS | 25.0% |
| GAATGTTATTGAGATTAGGT+TGG | - | Chr7:44187516-44187535 | MsG0780038321.01.T01:CDS | 30.0% | |
| TGGTGAATGTTATTGAGATT+AGG | - | Chr7:44187512-44187531 | MsG0780038321.01.T01:CDS | 30.0% | |
| ! | ATGTTATTGAGATTAGGTTG+GGG | - | Chr7:44187518-44187537 | MsG0780038321.01.T01:CDS | 30.0% |
| !!! | TAATCTGAAGGTTTTGAGAT+GGG | - | Chr7:44187432-44187451 | MsG0780038321.01.T01:CDS | 30.0% |
| !!! | TTAATCTGAAGGTTTTGAGA+TGG | - | Chr7:44187431-44187450 | MsG0780038321.01.T01:CDS | 30.0% |
| !!! | TTTGTTTTTGATGCTTTCGA+TGG | - | Chr7:44187492-44187511 | MsG0780038321.01.T01:CDS | 30.0% |
| ACTCAATCTTCTCAACAGTA+AGG | - | Chr7:44187381-44187400 | MsG0780038321.01.T01:CDS | 35.0% | |
| TCGTGCACATATTAATCTGA+AGG | - | Chr7:44187420-44187439 | MsG0780038321.01.T01:CDS | 35.0% | |
| ! | TTTAAGACCTTGAGCAACAA+GGG | + | Chr7:44187356-44187375 | None:intergenic | 35.0% |
| !!! | AATCTGAAGGTTTTGAGATG+GGG | - | Chr7:44187433-44187452 | MsG0780038321.01.T01:CDS | 35.0% |
| AGATGAGAGAAAGAAGCTGA+AGG | + | Chr7:44187332-44187351 | None:intergenic | 40.0% | |
| GAATACGGCGATTGTGAAAA+GGG | + | Chr7:44187203-44187222 | None:intergenic | 40.0% | |
| TCTTCTCAACAGTAAGGATG+TGG | - | Chr7:44187387-44187406 | MsG0780038321.01.T01:CDS | 40.0% | |
| ! | GTTTAAGACCTTGAGCAACA+AGG | + | Chr7:44187357-44187376 | None:intergenic | 40.0% |
| !! | ATCTGCTTTGGGATCTGTAA+TGG | - | Chr7:44187465-44187484 | MsG0780038321.01.T01:CDS | 40.0% |
| !! | TCTGCTTTGGGATCTGTAAT+GGG | - | Chr7:44187466-44187485 | MsG0780038321.01.T01:CDS | 40.0% |
| !!! | ATCTGAAGGTTTTGAGATGG+GGG | - | Chr7:44187434-44187453 | MsG0780038321.01.T01:CDS | 40.0% |
| CGAATACGGCGATTGTGAAA+AGG | + | Chr7:44187204-44187223 | None:intergenic | 45.0% | |
| TAGAGATAGGCCGACGAATA+CGG | + | Chr7:44187218-44187237 | None:intergenic | 45.0% | |
| TCATCTTCCCTTGTTGCTCA+AGG | - | Chr7:44187346-44187365 | MsG0780038321.01.T01:CDS | 45.0% | |
| TTCACAATCGCCGTATTCGT+CGG | - | Chr7:44187205-44187224 | MsG0780038321.01.T01:CDS | 45.0% | |
| ! | GTTGACTAGTCCGTCTAATG+CGG | + | Chr7:44187173-44187192 | None:intergenic | 45.0% |
| ! | TGCTCATGCTGTTGCTGTTA+TGG | - | Chr7:44187567-44187586 | MsG0780038321.01.T01:CDS | 45.0% |
| !! | CTGCTTTGGGATCTGTAATG+GGG | - | Chr7:44187467-44187486 | MsG0780038321.01.T01:CDS | 45.0% |
| !! | GTGTACGCTTGTTGTTGATG+AGG | + | Chr7:44187146-44187165 | None:intergenic | 45.0% |
| !!! | GTTTTGAGATGGGGGATGTT+GGG | - | Chr7:44187442-44187461 | MsG0780038321.01.T01:CDS | 45.0% |
| AGGTTGGGGATGTTGTCTTG+TGG | - | Chr7:44187532-44187551 | MsG0780038321.01.T01:CDS | 50.0% | |
| GGCCTATCTCTAACAACTCC+AGG | - | Chr7:44187226-44187245 | MsG0780038321.01.T01:CDS | 50.0% | |
| GGCCTGGAGTTGTTAGAGAT+AGG | + | Chr7:44187231-44187250 | None:intergenic | 50.0% | |
| GGGATGTTGGGATCTGCTTT+GGG | - | Chr7:44187454-44187473 | MsG0780038321.01.T01:CDS | 50.0% | |
| GTACACGTCACCGCATTAGA+CGG | - | Chr7:44187160-44187179 | MsG0780038321.01.T01:CDS | 50.0% | |
| !!! | GGTTTTGAGATGGGGGATGT+TGG | - | Chr7:44187441-44187460 | MsG0780038321.01.T01:CDS | 50.0% |
| CTTCTTTGCGACGTCGATGC+CGG | + | Chr7:44187287-44187306 | None:intergenic | 55.0% | |
| GGGGATGTTGGGATCTGCTT+TGG | - | Chr7:44187453-44187472 | MsG0780038321.01.T01:CDS | 55.0% | |
| AATCGCTCCTCTTGCGACGC+CGG | - | Chr7:44187265-44187284 | MsG0780038321.01.T01:CDS | 60.0% | |
| AGCGATTCTCCAGGCTGCGT+TGG | + | Chr7:44187252-44187271 | None:intergenic | 60.0% | |
| CGCAAGAGGAGCGATTCTCC+AGG | + | Chr7:44187261-44187280 | None:intergenic | 60.0% | |
| AACTCCAGGCCAACGCAGCC+TGG | - | Chr7:44187240-44187259 | MsG0780038321.01.T01:CDS | 65.0% | |
| ! | TTCTCCAGGCTGCGTTGGCC+TGG | + | Chr7:44187247-44187266 | None:intergenic | 65.0% |
| GTCGATGCCGGCGTCGCAAG+AGG | + | Chr7:44187275-44187294 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 44187136 | 44187654 | 44187136 | ID=MsG0780038321.01;Name=MsG0780038321.01 |
| Chr7 | mRNA | 44187136 | 44187654 | 44187136 | ID=MsG0780038321.01.T01;Parent=MsG0780038321.01;Name=MsG0780038321.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|172 |
| Chr7 | exon | 44187136 | 44187654 | 44187136 | ID=MsG0780038321.01.T01:exon:4806;Parent=MsG0780038321.01.T01 |
| Chr7 | CDS | 44187136 | 44187654 | 44187136 | ID=MsG0780038321.01.T01:cds;Parent=MsG0780038321.01.T01 |
| Gene Sequence |
| Protein sequence |
