Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040110.01.T01 | AES67467.2 | 70.089 | 224 | 35 | 9 | 1 | 219 | 1 | 197 | 6.90E-91 | 276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040110.01.T01 | G7IRQ1 | 70.089 | 224 | 35 | 9 | 1 | 219 | 1 | 197 | 3.29e-91 | 276 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048383.01 | MsG0780040110.01 | 0.827638 | 1.400547e-54 | 1.359860e-51 |
MsG0080048687.01 | MsG0780040110.01 | 0.801221 | 9.973073e-49 | 4.736752e-46 |
MsG0080048968.01 | MsG0780040110.01 | 0.813252 | 2.812794e-51 | 1.827468e-48 |
MsG0080049135.01 | MsG0780040110.01 | 0.800799 | 1.216264e-48 | 5.715318e-46 |
MsG0180000611.01 | MsG0780040110.01 | 0.846651 | 1.899759e-59 | 3.292740e-56 |
MsG0180000806.01 | MsG0780040110.01 | 0.812219 | 4.733575e-51 | 2.992093e-48 |
MsG0180001237.01 | MsG0780040110.01 | 0.802193 | 6.299708e-49 | 3.066626e-46 |
MsG0180001260.01 | MsG0780040110.01 | 0.820952 | 5.226226e-53 | 4.195097e-50 |
MsG0180001311.01 | MsG0780040110.01 | 0.801322 | 9.509703e-49 | 4.528255e-46 |
MsG0180001599.01 | MsG0780040110.01 | 0.832927 | 7.149455e-56 | 8.108039e-53 |
MsG0180002547.01 | MsG0780040110.01 | 0.812435 | 4.245116e-51 | 2.699114e-48 |
MsG0180002664.01 | MsG0780040110.01 | 0.815104 | 1.096891e-51 | 7.493065e-49 |
MsG0180002794.01 | MsG0780040110.01 | 0.807101 | 5.958886e-50 | 3.289868e-47 |
MsG0180003744.01 | MsG0780040110.01 | 0.818085 | 2.355721e-52 | 1.746159e-49 |
MsG0180003807.01 | MsG0780040110.01 | 0.800987 | 1.113606e-48 | 5.258407e-46 |
MsG0180004016.01 | MsG0780040110.01 | 0.827107 | 1.878052e-54 | 1.795541e-51 |
MsG0180004128.01 | MsG0780040110.01 | 0.815214 | 1.036923e-51 | 7.104678e-49 |
MsG0180004598.01 | MsG0780040110.01 | 0.804265 | 2.346771e-49 | 1.204610e-46 |
MsG0180004767.01 | MsG0780040110.01 | 0.815393 | 9.462147e-52 | 6.515472e-49 |
MsG0180004861.01 | MsG0780040110.01 | 0.816360 | 5.757250e-52 | 4.070818e-49 |
MsG0180005268.01 | MsG0780040110.01 | 0.803022 | 4.250046e-49 | 2.112956e-46 |
MsG0180005765.01 | MsG0780040110.01 | 0.809370 | 1.956958e-50 | 1.146933e-47 |
MsG0280006368.01 | MsG0780040110.01 | 0.806760 | 7.033064e-50 | 3.848941e-47 |
MsG0380011927.01 | MsG0780040110.01 | 0.839538 | 1.492741e-57 | 2.067611e-54 |
MsG0380013579.01 | MsG0780040110.01 | 0.807866 | 4.101019e-50 | 2.309702e-47 |
MsG0380014175.01 | MsG0780040110.01 | 0.801007 | 1.103213e-48 | 5.211932e-46 |
MsG0680031145.01 | MsG0780040110.01 | 0.804788 | 1.826081e-49 | 9.501049e-47 |
MsG0680031301.01 | MsG0780040110.01 | 0.801192 | 1.010993e-48 | 4.798372e-46 |
MsG0680031699.01 | MsG0780040110.01 | 0.821395 | 4.130554e-53 | 3.356467e-50 |
MsG0680031964.01 | MsG0780040110.01 | 0.811737 | 6.027788e-51 | 3.760864e-48 |
MsG0680034476.01 | MsG0780040110.01 | 0.804801 | 1.814839e-49 | 9.445686e-47 |
MsG0680035306.01 | MsG0780040110.01 | 0.822016 | 2.967710e-53 | 2.454071e-50 |
MsG0680035577.01 | MsG0780040110.01 | 0.816491 | 5.381430e-52 | 3.818496e-49 |
MsG0480020675.01 | MsG0780040110.01 | 0.800020 | 1.753062e-48 | 8.076495e-46 |
MsG0480021432.01 | MsG0780040110.01 | 0.841374 | 4.939977e-58 | 7.244233e-55 |
MsG0480022292.01 | MsG0780040110.01 | 0.813788 | 2.143614e-51 | 1.413204e-48 |
MsG0480022672.01 | MsG0780040110.01 | 0.830549 | 2.758907e-55 | 2.915961e-52 |
MsG0480022678.01 | MsG0780040110.01 | 0.811332 | 7.381595e-51 | 4.556236e-48 |
MsG0480022897.01 | MsG0780040110.01 | 0.801020 | 1.096578e-48 | 5.182232e-46 |
MsG0480022960.01 | MsG0780040110.01 | 0.806639 | 7.459236e-50 | 4.069276e-47 |
MsG0480023221.01 | MsG0780040110.01 | 0.807029 | 6.169507e-50 | 3.400042e-47 |
MsG0480023240.01 | MsG0780040110.01 | 0.833404 | 5.437904e-56 | 6.256101e-53 |
MsG0480023387.01 | MsG0780040110.01 | 0.833725 | 4.521266e-56 | 5.251480e-53 |
MsG0480023559.01 | MsG0780040110.01 | 0.808830 | 2.554542e-50 | 1.475625e-47 |
MsG0580024084.01 | MsG0780040110.01 | 0.801724 | 7.867805e-49 | 3.784449e-46 |
MsG0580024536.01 | MsG0780040110.01 | 0.824462 | 7.967577e-54 | 7.061719e-51 |
MsG0580024727.01 | MsG0780040110.01 | 0.822483 | 2.312055e-53 | 1.937731e-50 |
MsG0580025268.01 | MsG0780040110.01 | 0.805236 | 1.471285e-49 | 7.743570e-47 |
MsG0580025439.01 | MsG0780040110.01 | 0.810520 | 1.106704e-50 | 6.685524e-48 |
MsG0580025651.01 | MsG0780040110.01 | 0.804171 | 2.455470e-49 | 1.257369e-46 |
MsG0380015220.01 | MsG0780040110.01 | 0.803275 | 3.767837e-49 | 1.885487e-46 |
MsG0380015512.01 | MsG0780040110.01 | 0.811165 | 8.024806e-51 | 4.931613e-48 |
MsG0380015818.01 | MsG0780040110.01 | 0.801007 | 1.103097e-48 | 5.211401e-46 |
MsG0380016290.01 | MsG0780040110.01 | 0.814409 | 1.563581e-51 | 1.048387e-48 |
MsG0380016505.01 | MsG0780040110.01 | 0.834269 | 3.304064e-56 | 3.901335e-53 |
MsG0380016513.01 | MsG0780040110.01 | 0.816224 | 6.174976e-52 | 4.350026e-49 |
MsG0380017003.01 | MsG0780040110.01 | 0.824954 | 6.099165e-54 | 5.483542e-51 |
MsG0380017476.01 | MsG0780040110.01 | 0.830203 | 3.352727e-55 | 3.508635e-52 |
MsG0380017511.01 | MsG0780040110.01 | 0.810436 | 1.153660e-50 | 6.953480e-48 |
MsG0380017719.01 | MsG0780040110.01 | 0.827631 | 1.406209e-54 | 1.365047e-51 |
MsG0380018033.01 | MsG0780040110.01 | 0.832527 | 8.984474e-56 | 1.006866e-52 |
MsG0480018235.01 | MsG0780040110.01 | 0.823172 | 1.597929e-53 | 1.365582e-50 |
MsG0580026225.01 | MsG0780040110.01 | 0.820774 | 5.742809e-53 | 4.586526e-50 |
MsG0580026439.01 | MsG0780040110.01 | 0.809064 | 2.276015e-50 | 1.323041e-47 |
MsG0580028094.01 | MsG0780040110.01 | 0.822609 | 2.161526e-53 | 1.818274e-50 |
MsG0580028582.01 | MsG0780040110.01 | 0.809567 | 1.775090e-50 | 1.045828e-47 |
MsG0580029231.01 | MsG0780040110.01 | 0.804895 | 1.734213e-49 | 9.048696e-47 |
MsG0580029283.01 | MsG0780040110.01 | 0.823758 | 1.165787e-53 | 1.013011e-50 |
MsG0580029658.01 | MsG0780040110.01 | 0.802329 | 5.906379e-49 | 2.885393e-46 |
MsG0580029801.01 | MsG0780040110.01 | 0.826102 | 3.261622e-54 | 3.029625e-51 |
MsG0580030003.01 | MsG0780040110.01 | 0.817435 | 3.302003e-52 | 2.404585e-49 |
MsG0280006679.01 | MsG0780040110.01 | 0.819532 | 1.105511e-52 | 8.529889e-50 |
MsG0280006852.01 | MsG0780040110.01 | 0.817175 | 3.779595e-52 | 2.732697e-49 |
MsG0280007161.01 | MsG0780040110.01 | 0.803887 | 2.812272e-49 | 1.429741e-46 |
MsG0280007440.01 | MsG0780040110.01 | 0.807672 | 4.508123e-50 | 2.526205e-47 |
MsG0280007441.01 | MsG0780040110.01 | 0.811956 | 5.402332e-51 | 3.390268e-48 |
MsG0280007551.01 | MsG0780040110.01 | 0.802641 | 5.094359e-49 | 2.508364e-46 |
MsG0280007645.01 | MsG0780040110.01 | 0.800779 | 1.228072e-48 | 5.767677e-46 |
MsG0280007847.01 | MsG0780040110.01 | 0.816070 | 6.682867e-52 | 4.688193e-49 |
MsG0280008234.01 | MsG0780040110.01 | 0.807428 | 5.079911e-50 | 2.828704e-47 |
MsG0280009575.01 | MsG0780040110.01 | 0.835729 | 1.416297e-56 | 1.747117e-53 |
MsG0780039340.01 | MsG0780040110.01 | 0.820965 | 5.189747e-53 | 4.167370e-50 |
MsG0780039943.01 | MsG0780040110.01 | 0.824221 | 9.075840e-54 | 7.989213e-51 |
MsG0780040070.01 | MsG0780040110.01 | 0.801176 | 1.018839e-48 | 4.833570e-46 |
MsG0780040110.01 | MsG0780040125.01 | 0.812875 | 3.401938e-51 | 2.187935e-48 |
MsG0780040110.01 | MsG0780040182.01 | 0.816731 | 4.754201e-52 | 3.395799e-49 |
MsG0780040110.01 | MsG0780040190.01 | 0.817867 | 2.638505e-52 | 1.944231e-49 |
MsG0780040110.01 | MsG0780040519.01 | 0.807589 | 4.695127e-50 | 2.625228e-47 |
MsG0780040110.01 | MsG0780040569.01 | 0.813320 | 2.717706e-51 | 1.769062e-48 |
MsG0780040110.01 | MsG0780040845.01 | 0.809355 | 1.971623e-50 | 1.155089e-47 |
MsG0780040110.01 | MsG0780041127.01 | 0.819928 | 8.978053e-53 | 7.004133e-50 |
MsG0780040110.01 | MsG0780041210.01 | 0.806914 | 6.526516e-50 | 3.585998e-47 |
MsG0780040110.01 | MsG0780041223.01 | 0.804178 | 2.446594e-49 | 1.253062e-46 |
MsG0780040110.01 | MsG0780041423.01 | 0.801870 | 7.342777e-49 | 3.545308e-46 |
MsG0780040110.01 | MsG0780041490.01 | 0.805452 | 1.326089e-49 | 7.018236e-47 |
MsG0780040110.01 | MsG0880042033.01 | 0.853611 | 2.131526e-61 | 4.632459e-58 |
MsG0780040110.01 | MsG0880042760.01 | 0.800688 | 1.281376e-48 | 6.004323e-46 |
MsG0780040110.01 | MsG0880042978.01 | 0.828104 | 1.082002e-54 | 1.065090e-51 |
MsG0780040110.01 | MsG0880042991.01 | 0.805353 | 1.390731e-49 | 7.341650e-47 |
MsG0780040110.01 | MsG0880043162.01 | 0.838536 | 2.712451e-57 | 3.643877e-54 |
MsG0780040110.01 | MsG0880045329.01 | 0.800835 | 1.196355e-48 | 5.626883e-46 |
MsG0780040110.01 | MsG0880045460.01 | 0.805706 | 1.172679e-49 | 6.247509e-47 |
MsG0780040110.01 | MsG0880045619.01 | 0.800962 | 1.126883e-48 | 5.317541e-46 |
MsG0780040110.01 | MsG0880045656.01 | 0.866911 | 2.016244e-65 | 6.910223e-62 |
MsG0780040110.01 | MsG0880045869.01 | 0.807110 | 5.930761e-50 | 3.275162e-47 |
MsG0780040110.01 | MsG0880046068.01 | 0.848490 | 5.929905e-60 | 1.090163e-56 |
MsG0780040110.01 | MsG0880046074.01 | 0.815720 | 7.999875e-52 | 5.558578e-49 |
MsG0780040110.01 | MsG0880047212.01 | 0.810684 | 1.020017e-50 | 6.189103e-48 |
MsG0780040110.01 | MsG0880047428.01 | 0.803853 | 2.858708e-49 | 1.452030e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040110.01.T01 | MTR_2g094040 | 70.089 | 224 | 35 | 9 | 1 | 219 | 1 | 197 | 8.35e-95 | 276 |
MsG0780040110.01.T01 | MTR_3g005800 | 55.245 | 143 | 57 | 4 | 77 | 219 | 4 | 139 | 2.94e-46 | 152 |
MsG0780040110.01.T01 | MTR_3g005790 | 50.350 | 143 | 63 | 4 | 77 | 219 | 5 | 139 | 7.76e-45 | 147 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040110.01.T01 | AT1G22510 | 44.961 | 129 | 65 | 3 | 91 | 219 | 10 | 132 | 3.55e-31 | 113 |
MsG0780040110.01.T01 | AT1G72175 | 44.186 | 129 | 66 | 3 | 91 | 219 | 10 | 132 | 7.47e-29 | 107 |
MsG0780040110.01.T01 | AT1G22510 | 44.340 | 106 | 53 | 3 | 114 | 219 | 51 | 150 | 6.71e-20 | 84.3 |
MsG0780040110.01.T01 | AT1G72175 | 42.574 | 101 | 52 | 3 | 119 | 219 | 4 | 98 | 1.35e-16 | 74.3 |
MsG0780040110.01.T01 | AT4G33940 | 29.365 | 126 | 82 | 3 | 91 | 216 | 74 | 192 | 4.09e-14 | 68.9 |
MsG0780040110.01.T01 | AT4G33940 | 29.008 | 131 | 86 | 3 | 91 | 221 | 74 | 197 | 1.03e-13 | 68.9 |
Find 51 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAGAAAAGAAAGGGAAAT+TGG | 0.154216 | 7:+73162788 | MsG0780040110.01.T01:CDS |
GGCTAAGATAGAAGAAGAAT+TGG | 0.288794 | 7:+73162713 | MsG0780040110.01.T01:CDS |
TCATCGACCCGTTACCCTTT+TGG | 0.297940 | 7:+73163010 | MsG0780040110.01.T01:CDS |
GGTTGAAGAGAAAGTGAAAT+TGG | 0.301053 | 7:+73162674 | MsG0780040110.01.T01:CDS |
GAAGAATTGGGTGAAGAGAT+AGG | 0.309675 | 7:+73162726 | MsG0780040110.01.T01:CDS |
TGAATTCCAATCAGAACTTC+AGG | 0.330596 | 7:-73163089 | None:intergenic |
TCTATCTTAGCCTCTAACCC+TGG | 0.356011 | 7:-73162702 | None:intergenic |
CCCTTTCTCTTCTTCTACCT+CGG | 0.361185 | 7:-73162829 | None:intergenic |
CACGACCCTGAAGTTCTGAT+TGG | 0.390853 | 7:+73163083 | MsG0780040110.01.T01:CDS |
TCAAAGAGTCTCTGAGTAAT+GGG | 0.393871 | 7:-73163149 | None:intergenic |
AGAGATAGGGAAAGGGAAAT+CGG | 0.401158 | 7:+73162740 | MsG0780040110.01.T01:CDS |
GAAGAAAAGAAAGGGAAATT+GGG | 0.405478 | 7:+73162789 | MsG0780040110.01.T01:CDS |
ATTGGAAAACCCAGGGTTAG+AGG | 0.416917 | 7:+73162692 | MsG0780040110.01.T01:CDS |
GGGTGAAGAGAAAGGGAAAT+CGG | 0.418833 | 7:+73162611 | MsG0780040110.01.T01:CDS |
GTGAAGCTACATGCTCTCAT+TGG | 0.435563 | 7:+73162913 | MsG0780040110.01.T01:CDS |
CTATCTTAGCCTCTAACCCT+GGG | 0.438058 | 7:-73162701 | None:intergenic |
AAAAGCCTCCGCACGAGAAA+AGG | 0.442906 | 7:-73163176 | None:intergenic |
AACTTGTACAATCGCTGATT+GGG | 0.444017 | 7:+73162944 | MsG0780040110.01.T01:CDS |
GCTAAGATAGAAGAAGAATT+GGG | 0.456108 | 7:+73162714 | MsG0780040110.01.T01:CDS |
ATGTAGCTTCACATATAATC+TGG | 0.464921 | 7:-73162902 | None:intergenic |
CAACTTGTACAATCGCTGAT+TGG | 0.465387 | 7:+73162943 | MsG0780040110.01.T01:CDS |
GTAGGAACCAAAAGGGTAAC+GGG | 0.484752 | 7:-73163017 | None:intergenic |
CTACCTCGGCTTCTAACCCT+AGG | 0.485273 | 7:-73162815 | None:intergenic |
ACACGAGCTCTGAAAAGAAA+AGG | 0.485582 | 7:-73163230 | None:intergenic |
GGAGACTGAGAGAGAAGAAA+TGG | 0.487507 | 7:+73162653 | MsG0780040110.01.T01:CDS |
ATCAAAGAGTCTCTGAGTAA+TGG | 0.493238 | 7:-73163150 | None:intergenic |
AAAGGGAAATTGGGAAACCT+AGG | 0.493922 | 7:+73162798 | MsG0780040110.01.T01:CDS |
AGAAAAGGAAGAGATGTATC+GGG | 0.501383 | 7:-73163215 | None:intergenic |
AAGAAAAGGAAGAGATGTAT+CGG | 0.504612 | 7:-73163216 | None:intergenic |
CTGAGATAGAAGAAAAGAAA+GGG | 0.504970 | 7:+73162781 | MsG0780040110.01.T01:CDS |
AAGAATTGGGTGAAGAGATA+GGG | 0.506623 | 7:+73162727 | MsG0780040110.01.T01:CDS |
GCTGAGATAGAAGAAAAGAA+AGG | 0.507021 | 7:+73162780 | MsG0780040110.01.T01:CDS |
AACTACAACTGCGACGATGA+TGG | 0.510417 | 7:+73163047 | MsG0780040110.01.T01:CDS |
GCCGAGGTAGAAGAAGAGAA+AGG | 0.510966 | 7:+73162828 | MsG0780040110.01.T01:CDS |
TTGGGTGAAGAGATAGGGAA+AGG | 0.515644 | 7:+73162732 | MsG0780040110.01.T01:CDS |
CTCTCTCAGTCTCCAACGCT+AGG | 0.520593 | 7:-73162644 | None:intergenic |
TGGGTGAAGAGATAGGGAAA+GGG | 0.539493 | 7:+73162733 | MsG0780040110.01.T01:CDS |
CCGAGGTAGAAGAAGAGAAA+GGG | 0.540345 | 7:+73162829 | MsG0780040110.01.T01:CDS |
GAATTCCAATCAGAACTTCA+GGG | 0.553145 | 7:-73163088 | None:intergenic |
CATTTGACAAAGTTTGATGA+TGG | 0.560705 | 7:-73162858 | None:intergenic |
AGTAGGAACCAAAAGGGTAA+CGG | 0.564577 | 7:-73163018 | None:intergenic |
TGACAGTGTGGACATTTACA+AGG | 0.564971 | 7:-73162990 | None:intergenic |
GGAAAACGAAAACCTAGCGT+TGG | 0.582482 | 7:+73162632 | MsG0780040110.01.T01:CDS |
AAGGGAAATTGGGAAACCTA+GGG | 0.602237 | 7:+73162799 | MsG0780040110.01.T01:CDS |
AAACCTAGGGTTAGAAGCCG+AGG | 0.616185 | 7:+73162812 | MsG0780040110.01.T01:CDS |
ATCGGAAGAAATATCGTCAG+AGG | 0.632265 | 7:+73162758 | MsG0780040110.01.T01:CDS |
AAGTGAAATTGGAAAACCCA+GGG | 0.639009 | 7:+73162685 | MsG0780040110.01.T01:CDS |
ACATTTACAAGGTTCAATGT+CGG | 0.657703 | 7:-73162979 | None:intergenic |
GAAAAGGAAGAGATGTATCG+GGG | 0.659357 | 7:-73163214 | None:intergenic |
AAAGTGAAATTGGAAAACCC+AGG | 0.679877 | 7:+73162684 | MsG0780040110.01.T01:CDS |
GTAACGGGTCGATGACAGTG+TGG | 0.759412 | 7:-73163002 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAGACTTATAACACTATTTT+TGG | + | Chr7:73163110-73163129 | MsG0780040110.01.T01:CDS | 25.0% |
AAGAAAAGGAAGAGATGTAT+CGG | - | Chr7:73163219-73163238 | None:intergenic | 30.0% | |
ACATTTACAAGGTTCAATGT+CGG | - | Chr7:73162982-73163001 | None:intergenic | 30.0% | |
AGAAGAAAAGAAAGGGAAAT+TGG | + | Chr7:73162788-73162807 | MsG0780040110.01.T01:CDS | 30.0% | |
ATGTAGCTTCACATATAATC+TGG | - | Chr7:73162905-73162924 | None:intergenic | 30.0% | |
CATTTGACAAAGTTTGATGA+TGG | - | Chr7:73162861-73162880 | None:intergenic | 30.0% | |
CTGAGATAGAAGAAAAGAAA+GGG | + | Chr7:73162781-73162800 | MsG0780040110.01.T01:CDS | 30.0% | |
GAAGAAAAGAAAGGGAAATT+GGG | + | Chr7:73162789-73162808 | MsG0780040110.01.T01:CDS | 30.0% | |
GCTAAGATAGAAGAAGAATT+GGG | + | Chr7:73162714-73162733 | MsG0780040110.01.T01:CDS | 30.0% | |
!! | TTTTTCAGTAGGAACCAAAA+GGG | - | Chr7:73163027-73163046 | None:intergenic | 30.0% |
!!! | CAGTTGTAGTTTTTTTCAGT+AGG | - | Chr7:73163038-73163057 | None:intergenic | 30.0% |
!!! | TTTTTTCAGTAGGAACCAAA+AGG | - | Chr7:73163028-73163047 | None:intergenic | 30.0% |
AAAGTGAAATTGGAAAACCC+AGG | + | Chr7:73162684-73162703 | MsG0780040110.01.T01:CDS | 35.0% | |
AAGAATTGGGTGAAGAGATA+GGG | + | Chr7:73162727-73162746 | MsG0780040110.01.T01:CDS | 35.0% | |
AAGTGAAATTGGAAAACCCA+GGG | + | Chr7:73162685-73162704 | MsG0780040110.01.T01:CDS | 35.0% | |
AGAAAAGGAAGAGATGTATC+GGG | - | Chr7:73163218-73163237 | None:intergenic | 35.0% | |
ATCAAAGAGTCTCTGAGTAA+TGG | - | Chr7:73163153-73163172 | None:intergenic | 35.0% | |
GAATTCCAATCAGAACTTCA+GGG | - | Chr7:73163091-73163110 | None:intergenic | 35.0% | |
GCTGAGATAGAAGAAAAGAA+AGG | + | Chr7:73162780-73162799 | MsG0780040110.01.T01:CDS | 35.0% | |
GGCTAAGATAGAAGAAGAAT+TGG | + | Chr7:73162713-73162732 | MsG0780040110.01.T01:CDS | 35.0% | |
GGTTGAAGAGAAAGTGAAAT+TGG | + | Chr7:73162674-73162693 | MsG0780040110.01.T01:CDS | 35.0% | |
TCAAAGAGTCTCTGAGTAAT+GGG | - | Chr7:73163152-73163171 | None:intergenic | 35.0% | |
TGAATTCCAATCAGAACTTC+AGG | - | Chr7:73163092-73163111 | None:intergenic | 35.0% | |
! | AACTTGTACAATCGCTGATT+GGG | + | Chr7:73162944-73162963 | MsG0780040110.01.T01:CDS | 35.0% |
AAAGGGAAATTGGGAAACCT+AGG | + | Chr7:73162798-73162817 | MsG0780040110.01.T01:CDS | 40.0% | |
AAGGGAAATTGGGAAACCTA+GGG | + | Chr7:73162799-73162818 | MsG0780040110.01.T01:CDS | 40.0% | |
AGAGATAGGGAAAGGGAAAT+CGG | + | Chr7:73162740-73162759 | MsG0780040110.01.T01:CDS | 40.0% | |
AGTAGGAACCAAAAGGGTAA+CGG | - | Chr7:73163021-73163040 | None:intergenic | 40.0% | |
ATCGGAAGAAATATCGTCAG+AGG | + | Chr7:73162758-73162777 | MsG0780040110.01.T01:CDS | 40.0% | |
CAACTTGTACAATCGCTGAT+TGG | + | Chr7:73162943-73162962 | MsG0780040110.01.T01:CDS | 40.0% | |
GAAAAGGAAGAGATGTATCG+GGG | - | Chr7:73163217-73163236 | None:intergenic | 40.0% | |
GAAGAATTGGGTGAAGAGAT+AGG | + | Chr7:73162726-73162745 | MsG0780040110.01.T01:CDS | 40.0% | |
TGACAGTGTGGACATTTACA+AGG | - | Chr7:73162993-73163012 | None:intergenic | 40.0% | |
! | TTGATCTTCCTTTTCTCGTG+CGG | + | Chr7:73163168-73163187 | MsG0780040110.01.T01:CDS | 40.0% |
!! | ACACGAGCTCTGAAAAGAAA+AGG | - | Chr7:73163233-73163252 | None:intergenic | 40.0% |
AACTACAACTGCGACGATGA+TGG | + | Chr7:73163047-73163066 | MsG0780040110.01.T01:CDS | 45.0% | |
ATTGGAAAACCCAGGGTTAG+AGG | + | Chr7:73162692-73162711 | MsG0780040110.01.T01:CDS | 45.0% | |
CCCTTTCTCTTCTTCTACCT+CGG | - | Chr7:73162832-73162851 | None:intergenic | 45.0% | |
CCGAGGTAGAAGAAGAGAAA+GGG | + | Chr7:73162829-73162848 | MsG0780040110.01.T01:CDS | 45.0% | |
CTATCTTAGCCTCTAACCCT+GGG | - | Chr7:73162704-73162723 | None:intergenic | 45.0% | |
GGAAAACGAAAACCTAGCGT+TGG | + | Chr7:73162632-73162651 | MsG0780040110.01.T01:CDS | 45.0% | |
GGAGACTGAGAGAGAAGAAA+TGG | + | Chr7:73162653-73162672 | MsG0780040110.01.T01:CDS | 45.0% | |
GGGTGAAGAGAAAGGGAAAT+CGG | + | Chr7:73162611-73162630 | MsG0780040110.01.T01:CDS | 45.0% | |
GTAGGAACCAAAAGGGTAAC+GGG | - | Chr7:73163020-73163039 | None:intergenic | 45.0% | |
GTGAAGCTACATGCTCTCAT+TGG | + | Chr7:73162913-73162932 | MsG0780040110.01.T01:CDS | 45.0% | |
TCTATCTTAGCCTCTAACCC+TGG | - | Chr7:73162705-73162724 | None:intergenic | 45.0% | |
TGGGTGAAGAGATAGGGAAA+GGG | + | Chr7:73162733-73162752 | MsG0780040110.01.T01:CDS | 45.0% | |
TTGGGTGAAGAGATAGGGAA+AGG | + | Chr7:73162732-73162751 | MsG0780040110.01.T01:CDS | 45.0% | |
AAAAGCCTCCGCACGAGAAA+AGG | - | Chr7:73163179-73163198 | None:intergenic | 50.0% | |
AAACCTAGGGTTAGAAGCCG+AGG | + | Chr7:73162812-73162831 | MsG0780040110.01.T01:CDS | 50.0% | |
GCCGAGGTAGAAGAAGAGAA+AGG | + | Chr7:73162828-73162847 | MsG0780040110.01.T01:CDS | 50.0% | |
! | ATCTTCCTTTTCTCGTGCGG+AGG | + | Chr7:73163171-73163190 | MsG0780040110.01.T01:CDS | 50.0% |
! | CACGACCCTGAAGTTCTGAT+TGG | + | Chr7:73163083-73163102 | MsG0780040110.01.T01:CDS | 50.0% |
! | TCATCGACCCGTTACCCTTT+TGG | + | Chr7:73163010-73163029 | MsG0780040110.01.T01:CDS | 50.0% |
CTACCTCGGCTTCTAACCCT+AGG | - | Chr7:73162818-73162837 | None:intergenic | 55.0% | |
CTCTCTCAGTCTCCAACGCT+AGG | - | Chr7:73162647-73162666 | None:intergenic | 55.0% | |
! | TCTCGTGCGGAGGCTTTTCA+TGG | + | Chr7:73163181-73163200 | MsG0780040110.01.T01:CDS | 55.0% |
!! | GTAACGGGTCGATGACAGTG+TGG | - | Chr7:73163005-73163024 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 73162609 | 73163286 | 73162609 | ID=MsG0780040110.01;Name=MsG0780040110.01 |
Chr7 | mRNA | 73162609 | 73163286 | 73162609 | ID=MsG0780040110.01.T01;Parent=MsG0780040110.01;Name=MsG0780040110.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|225 |
Chr7 | exon | 73162609 | 73163286 | 73162609 | ID=MsG0780040110.01.T01:exon:13129;Parent=MsG0780040110.01.T01 |
Chr7 | CDS | 73162609 | 73163286 | 73162609 | ID=MsG0780040110.01.T01:cds;Parent=MsG0780040110.01.T01 |
Gene Sequence |
Protein sequence |