AlfalfaGEDB | MsG0880045684.01

M. sativa cultivar ZhongmuNo.1 / MsG0880045684.01

KEGG: K02935
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFAM: PF00542

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045684.01.T01	XP_003629385.1	69.048	126	13	1	1	100	70	195	1.70E-42	147

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045684.01.T01	C0ZIG8	59.649	57	23	0	40	96	60	116	2.34E-13	63.9

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047791.01	MsG0880045684.01	0.820036	8.481013e-53	6.636524e-50
MsG0080048152.01	MsG0880045684.01	0.828954	6.746465e-55	6.806685e-52
MsG0080048383.01	MsG0880045684.01	0.817721	2.846646e-52	2.089274e-49
MsG0080048687.01	MsG0880045684.01	0.823604	1.266474e-53	1.095619e-50
MsG0080048784.01	MsG0880045684.01	0.819524	1.110346e-52	8.564989e-50
MsG0080048815.01	MsG0880045684.01	0.810222	1.283103e-50	7.690133e-48
MsG0080048968.01	MsG0880045684.01	0.808309	3.298986e-50	1.879952e-47
MsG0180000144.01	MsG0880045684.01	0.839140	1.893438e-57	2.590806e-54
MsG0180000155.01	MsG0880045684.01	0.814426	1.549791e-51	1.039590e-48
MsG0180000205.01	MsG0880045684.01	0.817777	2.765088e-52	2.032552e-49
MsG0180000339.01	MsG0880045684.01	0.807318	5.359065e-50	2.975722e-47
MsG0180000355.01	MsG0880045684.01	0.857600	1.462086e-62	3.628648e-59
MsG0180000384.01	MsG0880045684.01	0.824719	6.930810e-54	6.189725e-51
MsG0180000568.01	MsG0880045684.01	0.850067	2.157259e-60	4.174891e-57
MsG0180000835.01	MsG0880045684.01	0.802312	5.955964e-49	2.908350e-46
MsG0180001118.01	MsG0880045684.01	0.818691	1.717435e-52	1.294541e-49
MsG0180001886.01	MsG0880045684.01	0.807031	6.164684e-50	3.397506e-47
MsG0180002283.01	MsG0880045684.01	0.800706	1.270806e-48	5.957300e-46
MsG0180002547.01	MsG0880045684.01	0.838772	2.357863e-57	3.190413e-54
MsG0880044005.01	MsG0880045684.01	0.808587	2.878432e-50	1.652183e-47
MsG0880044975.01	MsG0880045684.01	0.859214	4.830067e-63	1.265849e-59
MsG0880045017.01	MsG0880045684.01	0.815221	1.033166e-51	7.080407e-49
MsG0880045145.01	MsG0880045684.01	0.808314	3.292222e-50	1.876333e-47
MsG0880045294.01	MsG0880045684.01	0.806932	6.470583e-50	3.556924e-47
MsG0880045460.01	MsG0880045684.01	0.826511	2.606771e-54	2.449717e-51
MsG0880045656.01	MsG0880045684.01	0.862076	6.545959e-64	1.892662e-60
MsG0880045684.01	MsG0880046177.01	0.817986	2.480931e-52	1.834020e-49
MsG0880045684.01	MsG0880046517.01	0.818293	2.114001e-52	1.576050e-49
MsG0880045684.01	MsG0880047212.01	0.872038	4.323424e-67	1.782154e-63
MsG0880045684.01	MsG0880047427.01	0.805622	1.221537e-49	6.493103e-47
MsG0880045684.01	MsG0880047428.01	0.824690	7.042333e-54	6.284024e-51
MsG0880045684.01	MsG0880047470.01	0.803865	2.842303e-49	1.444170e-46
MsG0880045684.01	MsG0880047607.01	0.801686	8.009518e-49	3.848950e-46
MsG0880045684.01	MsG0880047696.01	0.834944	2.235881e-56	2.694052e-53
MsG0880045684.01	MsG0880047703.01	0.830121	3.509992e-55	3.664279e-52
MsG0180002794.01	MsG0880045684.01	0.819948	8.882897e-53	6.933749e-50
MsG0180003353.01	MsG0880045684.01	0.800400	1.467380e-48	6.825884e-46
MsG0180003493.01	MsG0880045684.01	0.837987	3.757014e-57	4.963932e-54
MsG0180003651.01	MsG0880045684.01	0.813079	3.069052e-51	1.984636e-48
MsG0180003697.01	MsG0880045684.01	0.807680	4.490570e-50	2.516931e-47
MsG0180003793.01	MsG0880045684.01	0.867038	1.837028e-65	6.322840e-62
MsG0180003821.01	MsG0880045684.01	0.847031	1.495036e-59	2.622793e-56
MsG0180003885.01	MsG0880045684.01	0.817991	2.474436e-52	1.829533e-49
MsG0180003922.01	MsG0880045684.01	0.829780	4.250270e-55	4.394294e-52
MsG0180003932.01	MsG0880045684.01	0.826101	3.263001e-54	3.030852e-51
MsG0180004009.01	MsG0880045684.01	0.853949	1.703735e-61	3.744442e-58
MsG0180004016.01	MsG0880045684.01	0.832672	8.269130e-56	9.307409e-53
MsG0180004046.01	MsG0880045684.01	0.817407	3.350786e-52	2.438220e-49
MsG0180004062.01	MsG0880045684.01	0.815608	8.473366e-52	5.869638e-49
MsG0180004128.01	MsG0880045684.01	0.820791	5.692126e-53	4.548099e-50
MsG0180004130.01	MsG0880045684.01	0.848087	7.663870e-60	1.390315e-56
MsG0180004398.01	MsG0880045684.01	0.848147	7.374944e-60	1.340544e-56
MsG0180004481.01	MsG0880045684.01	0.807914	4.004947e-50	2.258389e-47
MsG0180004482.01	MsG0880045684.01	0.802376	5.777288e-49	2.825686e-46
MsG0180004493.01	MsG0880045684.01	0.817017	4.100410e-52	2.952070e-49
MsG0180004509.01	MsG0880045684.01	0.813301	2.743796e-51	1.785088e-48
MsG0180004750.01	MsG0880045684.01	0.804942	1.695360e-49	8.856428e-47
MsG0180004854.01	MsG0880045684.01	0.840302	9.436238e-58	1.338396e-54
MsG0180004861.01	MsG0880045684.01	0.855694	5.312450e-62	1.236984e-58
MsG0180005049.01	MsG0880045684.01	0.811185	7.946357e-51	4.886031e-48
MsG0180005169.01	MsG0880045684.01	0.801472	8.861501e-49	4.235533e-46
MsG0180005334.01	MsG0880045684.01	0.841011	6.152914e-58	8.920936e-55
MsG0180005382.01	MsG0880045684.01	0.802751	4.834244e-49	2.387126e-46
MsG0180005787.01	MsG0880045684.01	0.803690	3.091176e-49	1.563463e-46
MsG0180005913.01	MsG0880045684.01	0.843062	1.765549e-58	2.729416e-55
MsG0180006017.01	MsG0880045684.01	0.833156	6.270515e-56	7.160670e-53
MsG0180006096.01	MsG0880045684.01	0.832344	9.975203e-56	1.111757e-52
MsG0280006305.01	MsG0880045684.01	0.801756	7.746993e-49	3.729406e-46
MsG0780040430.01	MsG0880045684.01	0.815855	7.464277e-52	5.205175e-49
MsG0780040569.01	MsG0880045684.01	0.839907	1.196699e-57	1.676788e-54
MsG0780041137.01	MsG0880045684.01	0.813245	2.821763e-51	1.832959e-48
MsG0780041223.01	MsG0880045684.01	0.864879	8.847865e-65	2.821054e-61
MsG0780041258.01	MsG0880045684.01	0.810749	9.871977e-51	6.000554e-48
MsG0780041268.01	MsG0880045684.01	0.833505	5.132135e-56	5.921954e-53
MsG0780041435.01	MsG0880045684.01	0.827116	1.868950e-54	1.787324e-51
MsG0780041440.01	MsG0880045684.01	0.830876	2.293828e-55	2.448103e-52
MsG0780041482.01	MsG0880045684.01	0.814629	1.397515e-51	9.425894e-49
MsG0780041729.01	MsG0880045684.01	-0.824258	8.898251e-54	7.840775e-51
MsG0880042033.01	MsG0880045684.01	0.847010	1.515361e-59	2.656496e-56
MsG0880042324.01	MsG0880045684.01	0.809146	2.185471e-50	1.273228e-47
MsG0880042519.01	MsG0880045684.01	0.819769	9.758614e-53	7.579757e-50
MsG0880042795.01	MsG0880045684.01	0.828086	1.092858e-54	1.075216e-51
MsG0880042978.01	MsG0880045684.01	0.816603	5.079139e-52	3.615245e-49
MsG0880042991.01	MsG0880045684.01	0.840380	9.005064e-58	1.280449e-54
MsG0880043081.01	MsG0880045684.01	0.806501	7.977706e-50	4.337033e-47
MsG0280010753.01	MsG0880045684.01	0.805425	1.343288e-49	7.104232e-47
MsG0280010776.01	MsG0880045684.01	0.847453	1.145443e-59	2.037031e-56
MsG0280011371.01	MsG0880045684.01	0.803770	2.974343e-49	1.507482e-46
MsG0280011387.01	MsG0880045684.01	0.803721	3.045008e-49	1.541326e-46
MsG0380011614.01	MsG0880045684.01	0.835092	2.052170e-56	2.483280e-53
MsG0380011704.01	MsG0880045684.01	0.838634	2.558868e-57	3.448097e-54
MsG0380011747.01	MsG0880045684.01	0.824975	6.029629e-54	5.424195e-51
MsG0380011844.01	MsG0880045684.01	0.813031	3.144647e-51	2.030986e-48
MsG0380012073.01	MsG0880045684.01	0.811641	6.325772e-51	3.936392e-48
MsG0380012122.01	MsG0880045684.01	0.813879	2.047037e-51	1.352917e-48
MsG0380012570.01	MsG0880045684.01	0.837608	4.700393e-57	6.138192e-54
MsG0380013085.01	MsG0880045684.01	0.834350	3.153748e-56	3.732767e-53
MsG0380013579.01	MsG0880045684.01	0.804793	1.821035e-49	9.476237e-47
MsG0380014175.01	MsG0880045684.01	0.857806	1.269822e-62	3.172645e-59
MsG0380014225.01	MsG0880045684.01	-0.800307	1.532648e-48	7.113044e-46
MsG0380014875.01	MsG0880045684.01	0.801086	1.062659e-48	5.030325e-46
MsG0380014885.01	MsG0880045684.01	0.800969	1.122884e-48	5.299681e-46
MsG0680031000.01	MsG0880045684.01	0.849934	2.351067e-60	4.530270e-57
MsG0680031468.01	MsG0880045684.01	0.803008	4.278336e-49	2.126253e-46
MsG0680031507.01	MsG0880045684.01	0.801284	9.681463e-49	4.605655e-46
MsG0680031628.01	MsG0880045684.01	0.842266	2.872253e-58	4.331560e-55
MsG0680031699.01	MsG0880045684.01	0.812961	3.258068e-51	2.100149e-48
MsG0680031939.01	MsG0880045684.01	0.810672	1.026069e-50	6.223928e-48
MsG0680031964.01	MsG0880045684.01	0.830193	3.371490e-55	3.527282e-52
MsG0680031967.01	MsG0880045684.01	0.810241	1.271433e-50	7.624276e-48
MsG0680034445.01	MsG0880045684.01	0.806521	7.900379e-50	4.297218e-47
MsG0680034913.01	MsG0880045684.01	0.819069	1.409677e-52	1.073725e-49
MsG0680035306.01	MsG0880045684.01	0.813155	2.954095e-51	1.914172e-48
MsG0680035577.01	MsG0880045684.01	0.818418	1.980911e-52	1.482082e-49
MsG0480018477.01	MsG0880045684.01	0.835860	1.312097e-56	1.624901e-53
MsG0480018850.01	MsG0880045684.01	0.813869	2.057724e-51	1.359557e-48
MsG0480018911.01	MsG0880045684.01	0.830386	3.023387e-55	3.180622e-52
MsG0480019148.01	MsG0880045684.01	0.818833	1.594625e-52	1.206742e-49
MsG0480019380.01	MsG0880045684.01	0.848386	6.337078e-60	1.160962e-56
MsG0480019686.01	MsG0880045684.01	-0.811919	5.502216e-51	3.449417e-48
MsG0480021006.01	MsG0880045684.01	0.826458	2.683239e-54	2.517847e-51
MsG0480021037.01	MsG0880045684.01	0.886145	4.411333e-72	3.113846e-68
MsG0480021432.01	MsG0880045684.01	0.830039	3.675811e-55	3.828209e-52
MsG0480021492.01	MsG0880045684.01	0.806306	8.772095e-50	4.745159e-47
MsG0480021706.01	MsG0880045684.01	0.868124	8.245597e-66	2.949407e-62
MsG0480021724.01	MsG0880045684.01	0.803001	4.293067e-49	2.133229e-46
MsG0480021735.01	MsG0880045684.01	0.829654	4.561843e-55	4.698632e-52
MsG0480021768.01	MsG0880045684.01	0.815933	7.171401e-52	5.011745e-49
MsG0480022223.01	MsG0880045684.01	0.854351	1.303948e-61	2.903655e-58
MsG0480022292.01	MsG0880045684.01	0.801895	7.255821e-49	3.505579e-46
MsG0480022672.01	MsG0880045684.01	0.854205	1.437008e-61	3.185441e-58
MsG0480022696.01	MsG0880045684.01	0.806214	9.171857e-50	4.950070e-47
MsG0480022711.01	MsG0880045684.01	0.823529	1.318993e-53	1.138606e-50
MsG0480022780.01	MsG0880045684.01	0.841808	3.794725e-58	5.640148e-55
MsG0480022921.01	MsG0880045684.01	0.808774	2.625199e-50	1.514183e-47
MsG0480022960.01	MsG0880045684.01	0.831544	1.572019e-55	1.711415e-52
MsG0480023055.01	MsG0880045684.01	0.835389	1.726930e-56	2.108723e-53
MsG0480023073.01	MsG0880045684.01	0.802036	6.786881e-49	3.290682e-46
MsG0480023149.01	MsG0880045684.01	0.806142	9.496704e-50	5.115797e-47
MsG0480023162.01	MsG0880045684.01	0.811269	7.616320e-51	4.693533e-48
MsG0480023221.01	MsG0880045684.01	0.847161	1.377844e-59	2.427467e-56
MsG0480023356.01	MsG0880045684.01	0.811516	6.733125e-51	4.176545e-48
MsG0480023384.01	MsG0880045684.01	0.813714	2.225927e-51	1.464588e-48
MsG0480023387.01	MsG0880045684.01	0.843298	1.526743e-58	2.378384e-55
MsG0480023396.01	MsG0880045684.01	0.805705	1.173407e-49	6.251154e-47
MsG0480023652.01	MsG0880045684.01	0.829903	3.967054e-55	4.116016e-52
MsG0480023867.01	MsG0880045684.01	0.830471	2.882552e-55	3.039730e-52
MsG0580024084.01	MsG0880045684.01	0.839485	1.540859e-57	2.130956e-54
MsG0580024197.01	MsG0880045684.01	0.808799	2.592846e-50	1.496525e-47
MsG0580024339.01	MsG0880045684.01	0.814670	1.369091e-51	9.243863e-49
MsG0580024619.01	MsG0880045684.01	0.853627	2.108554e-61	4.584819e-58
MsG0580024727.01	MsG0880045684.01	0.800263	1.564640e-48	7.253077e-46
MsG0580025268.01	MsG0880045684.01	0.866019	3.870557e-65	1.285492e-61
MsG0580025363.01	MsG0880045684.01	-0.814286	1.664944e-51	1.112553e-48
MsG0580025400.01	MsG0880045684.01	0.821399	4.122761e-53	3.350411e-50
MsG0580025439.01	MsG0880045684.01	0.826389	2.786121e-54	2.609367e-51
MsG0580025460.01	MsG0880045684.01	0.807127	5.884073e-50	3.250744e-47
MsG0580025756.01	MsG0880045684.01	0.838221	3.270022e-57	4.350581e-54
MsG0380015027.01	MsG0880045684.01	0.834943	2.237039e-56	2.695356e-53
MsG0380015220.01	MsG0880045684.01	0.830660	2.591691e-55	2.748400e-52
MsG0380015435.01	MsG0880045684.01	0.812651	3.808939e-51	2.435354e-48
MsG0380015598.01	MsG0880045684.01	-0.801817	7.528750e-49	3.630099e-46
MsG0380016005.01	MsG0880045684.01	0.858318	8.942118e-63	2.273112e-59
MsG0380016067.01	MsG0880045684.01	0.810738	9.930048e-51	6.033882e-48
MsG0380016290.01	MsG0880045684.01	0.840946	6.401361e-58	9.262663e-55
MsG0380016347.01	MsG0880045684.01	-0.800651	1.304318e-48	6.106206e-46
MsG0380016505.01	MsG0880045684.01	0.829089	6.255371e-55	6.336853e-52
MsG0380016560.01	MsG0880045684.01	0.815686	8.140686e-52	5.651099e-49
MsG0380016671.01	MsG0880045684.01	0.861526	9.640706e-64	2.736370e-60
MsG0380017433.01	MsG0880045684.01	0.804234	2.382128e-49	1.221748e-46
MsG0380017476.01	MsG0880045684.01	0.825357	4.897988e-54	4.454094e-51
MsG0380017511.01	MsG0880045684.01	0.830681	2.560338e-55	2.716922e-52
MsG0380018022.01	MsG0880045684.01	0.828278	9.825229e-55	9.720345e-52
MsG0380018033.01	MsG0880045684.01	0.861806	7.918169e-64	2.268069e-60
MsG0380018044.01	MsG0880045684.01	0.802662	5.044138e-49	2.484912e-46
MsG0480018124.01	MsG0880045684.01	0.800270	1.559025e-48	7.228500e-46
MsG0480018235.01	MsG0880045684.01	0.839509	1.518956e-57	2.102201e-54
MsG0480018278.01	MsG0880045684.01	0.815623	8.406873e-52	5.826189e-49
MsG0480018292.01	MsG0880045684.01	0.807612	4.643119e-50	2.597743e-47
MsG0580026137.01	MsG0880045684.01	0.820820	5.604805e-53	4.482137e-50
MsG0580026301.01	MsG0880045684.01	0.815485	9.026813e-52	6.231931e-49
MsG0580026439.01	MsG0880045684.01	0.808736	2.674441e-50	1.541050e-47
MsG0580026485.01	MsG0880045684.01	0.819245	1.285276e-52	9.837614e-50
MsG0580027361.01	MsG0880045684.01	0.804104	2.535270e-49	1.296026e-46
MsG0580027891.01	MsG0880045684.01	0.801374	9.281237e-49	4.425247e-46
MsG0580028582.01	MsG0880045684.01	0.829275	5.638298e-55	5.744166e-52
MsG0580028597.01	MsG0880045684.01	0.855539	5.895748e-62	1.365633e-58
MsG0580029283.01	MsG0880045684.01	0.831347	1.757202e-55	1.901748e-52
MsG0580029736.01	MsG0880045684.01	0.819379	1.197867e-52	9.202063e-50
MsG0580029905.01	MsG0880045684.01	0.805649	1.205773e-49	6.413838e-47
MsG0580029919.01	MsG0880045684.01	0.811429	7.032258e-51	4.352082e-48
MsG0580030010.01	MsG0880045684.01	0.805590	1.240263e-49	6.587311e-47
MsG0680030350.01	MsG0880045684.01	0.850685	1.447161e-60	2.857575e-57
MsG0280006461.01	MsG0880045684.01	0.801214	1.000864e-48	4.752810e-46
MsG0280006545.01	MsG0880045684.01	0.843532	1.322775e-58	2.075635e-55
MsG0280006852.01	MsG0880045684.01	0.833360	5.577275e-56	6.408212e-53
MsG0280006892.01	MsG0880045684.01	0.800234	1.586022e-48	7.346669e-46
MsG0280006993.01	MsG0880045684.01	0.844605	6.816881e-59	1.106335e-55
MsG0280007441.01	MsG0880045684.01	0.816061	6.713321e-52	4.708367e-49
MsG0280007527.01	MsG0880045684.01	0.826932	2.067976e-54	1.967224e-51
MsG0280007847.01	MsG0880045684.01	0.892618	1.344962e-74	1.238879e-70
MsG0280007903.01	MsG0880045684.01	0.825152	5.477313e-54	4.952430e-51
MsG0280008118.01	MsG0880045684.01	0.837669	4.535549e-57	5.934586e-54
MsG0280008429.01	MsG0880045684.01	0.817156	3.816636e-52	2.758108e-49
MsG0280009141.01	MsG0880045684.01	0.830027	3.699465e-55	3.851546e-52
MsG0280009230.01	MsG0880045684.01	0.817348	3.454956e-52	2.509854e-49
MsG0280009353.01	MsG0880045684.01	0.810707	1.008065e-50	6.120529e-48
MsG0280009575.01	MsG0880045684.01	0.872285	3.577228e-67	1.488310e-63
MsG0280009685.01	MsG0880045684.01	0.825515	4.495678e-54	4.106537e-51
MsG0280010013.01	MsG0880045684.01	0.807195	5.692194e-50	3.150462e-47
MsG0280010082.01	MsG0880045684.01	0.813182	2.913023e-51	1.888990e-48
MsG0280010411.01	MsG0880045684.01	0.835346	1.770108e-56	2.158841e-53
MsG0680035765.01	MsG0880045684.01	0.820595	6.312272e-53	5.015921e-50
MsG0680035877.01	MsG0880045684.01	0.832257	1.048232e-55	1.165212e-52
MsG0680035888.01	MsG0880045684.01	0.858937	5.844961e-63	1.517277e-59
MsG0780035937.01	MsG0880045684.01	0.829069	6.326119e-55	6.404314e-52
MsG0780036186.01	MsG0880045684.01	0.835327	1.789494e-56	2.181310e-53
MsG0780036240.01	MsG0880045684.01	0.828205	1.023181e-54	1.010147e-51
MsG0780036544.01	MsG0880045684.01	-0.812877	3.397618e-51	2.185323e-48
MsG0780036659.01	MsG0880045684.01	0.825973	3.499871e-54	3.239228e-51
MsG0780037093.01	MsG0880045684.01	0.826772	2.258400e-54	2.138133e-51
MsG0780037240.01	MsG0880045684.01	0.807158	5.795916e-50	3.204749e-47
MsG0780038400.01	MsG0880045684.01	0.870074	1.919662e-66	7.370352e-63
MsG0780038892.01	MsG0880045684.01	0.811539	6.657180e-51	4.131842e-48
MsG0780038948.01	MsG0880045684.01	0.832970	6.973064e-56	7.919002e-53
MsG0780039369.01	MsG0880045684.01	0.801024	1.094479e-48	5.172883e-46
MsG0780039643.01	MsG0880045684.01	0.803210	3.886648e-49	1.941692e-46
MsG0780039848.01	MsG0880045684.01	0.807492	4.923001e-50	2.745916e-47
MsG0780040070.01	MsG0880045684.01	0.832927	7.149455e-56	8.108039e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045684.01.T01	MTR_8g076780	69.048	126	13	1	1	100	70	195	2.05e-46	147
MsG0880045684.01.T01	MTR_2g031760	66.129	62	21	0	39	100	129	190	5.72e-18	74.7
MsG0880045684.01.T01	MTR_2g031960	71.698	53	15	0	48	100	103	155	1.36e-17	73.2
MsG0880045684.01.T01	MTR_7g053520	64.407	59	21	0	42	100	159	217	2.01e-16	71.2
MsG0880045684.01.T01	MTR_2g064300	61.017	59	23	0	42	100	158	216	4.14e-16	70.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045684.01.T01	AT4G36420	51.220	123	33	3	1	100	61	179	7.75e-29	102
MsG0880045684.01.T01	AT3G06040	75.472	53	13	0	48	100	134	186	8.41e-18	74.3
MsG0880045684.01.T01	AT3G06040	75.472	53	13	0	48	100	134	186	8.41e-18	74.3
MsG0880045684.01.T01	AT3G06040	75.472	53	13	0	48	100	134	186	8.41e-18	74.3
MsG0880045684.01.T01	AT4G37660	59.677	62	25	0	39	100	106	167	4.29e-16	69.7
MsG0880045684.01.T01	AT1G70190	64.151	53	19	0	48	100	156	208	1.48e-14	66.2
MsG0880045684.01.T01	AT1G70190	64.151	53	19	0	48	100	156	208	1.48e-14	66.2

Find 34 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAGTGATGCGAGTGAAAA+AGG	0.246427	8:-62693219	MsG0880045684.01.T01:CDS
TGGTTCCTGGAATGGGAATA+AGG	0.260154	8:-62693166	MsG0880045684.01.T01:CDS
AGGTGTAGGTGGAGGGAAAG+GGG	0.337630	8:-62693132	MsG0880045684.01.T01:CDS
TTAAGGTTATTAAAGAAGTT+AGG	0.362138	8:-62693017	MsG0880045684.01.T01:intron
GGTTGGTGCAAAAGCTTCTA+TGG	0.362512	8:-62692878	MsG0880045684.01.T01:CDS
GGTTCCTGGAATGGGAATAA+GGG	0.368867	8:-62693165	MsG0880045684.01.T01:CDS
ATTCCCCTTATTCCCATTCC+AGG	0.371516	8:+62693161	None:intergenic
ATTATGATGCTGATGGTTCC+TGG	0.396685	8:-62693179	MsG0880045684.01.T01:CDS
GGTGTAGGTGGAGGGAAAGG+GGG	0.396694	8:-62693131	MsG0880045684.01.T01:CDS
AGAGGTGTAGGTGGAGGGAA+AGG	0.431861	8:-62693134	MsG0880045684.01.T01:CDS
GTTGAAGGAAGCTAAGGATT+TGG	0.435359	8:-62692977	MsG0880045684.01.T01:CDS
GGAACCATCAGCATCATAAT+CGG	0.467185	8:+62693182	None:intergenic
GGGGATTATTGCTAAGTTGA+AGG	0.470094	8:-62692902	MsG0880045684.01.T01:CDS
GAGGTGTAGGTGGAGGGAAA+GGG	0.479166	8:-62693133	MsG0880045684.01.T01:CDS
ATGCCGAGAGGTGTAGGTGG+AGG	0.492930	8:-62693140	MsG0880045684.01.T01:CDS
ATTGCTAAGTTGAAGGAGGT+TGG	0.495872	8:-62692895	MsG0880045684.01.T01:CDS
ATGCTGATGGTTCCTGGAAT+GGG	0.503308	8:-62693173	MsG0880045684.01.T01:CDS
TTTGGGGTTGAAGGAAGCTA+AGG	0.515112	8:-62692983	MsG0880045684.01.T01:CDS
GATGCTGATGGTTCCTGGAA+TGG	0.517030	8:-62693174	MsG0880045684.01.T01:CDS
TGTGACGAAAGAAGAGGCCG+AGG	0.536944	8:-62692923	MsG0880045684.01.T01:CDS
GATTATTGCTAAGTTGAAGG+AGG	0.540833	8:-62692899	MsG0880045684.01.T01:CDS
AGGGGAATGCCGAGAGGTGT+AGG	0.541839	8:-62693146	MsG0880045684.01.T01:CDS
GAAGGAAGCTAAGGATTTGG+TGG	0.548600	8:-62692974	MsG0880045684.01.T01:CDS
CAACTTAGCAATAATCCCCT+CGG	0.570601	8:+62692906	None:intergenic
TTCCCTCCACCTACACCTCT+CGG	0.576289	8:+62693137	None:intergenic
TGCCGAGAGGTGTAGGTGGA+GGG	0.581642	8:-62693139	MsG0880045684.01.T01:CDS
GGAATGCCGAGAGGTGTAGG+TGG	0.612707	8:-62693143	MsG0880045684.01.T01:CDS
GCTTCCGATTATGATGCTGA+TGG	0.621281	8:-62693186	MsG0880045684.01.T01:CDS
ACACCTTTCTTCAAAAGCGT+AGG	0.629486	8:+62692943	None:intergenic
GTGACGAAAGAAGAGGCCGA+GGG	0.636034	8:-62692922	MsG0880045684.01.T01:CDS
GTTCCTGGAATGGGAATAAG+GGG	0.637463	8:-62693164	MsG0880045684.01.T01:CDS
GAAAGGTGTGACGAAAGAAG+AGG	0.651585	8:-62692929	MsG0880045684.01.T01:CDS
TGACGAAAGAAGAGGCCGAG+GGG	0.703464	8:-62692921	MsG0880045684.01.T01:CDS
GGAATAAGGGGAATGCCGAG+AGG	0.729602	8:-62693152	MsG0880045684.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAAGGTTATTAAAGAAGTT+AGG	-	Chr8:62693086-62693105	MsG0880045684.01.T01:intron	20.0%
!	AGTTAGGAGTTTTACTAGTT+TGG	-	Chr8:62693102-62693121	MsG0880045684.01.T01:intron	30.0%
!!	GTTAGGAGTTTTACTAGTTT+GGG	-	Chr8:62693103-62693122	MsG0880045684.01.T01:intron	30.0%
!!	TTAGGAGTTTTACTAGTTTG+GGG	-	Chr8:62693104-62693123	MsG0880045684.01.T01:intron	30.0%
!	GATTATTGCTAAGTTGAAGG+AGG	-	Chr8:62693204-62693223	MsG0880045684.01.T01:CDS	35.0%
!!	TTTTACTAGTTTGGGGTTGA+AGG	-	Chr8:62693111-62693130	MsG0880045684.01.T01:intron	35.0%
	ATTATGATGCTGATGGTTCC+TGG	-	Chr8:62692924-62692943	MsG0880045684.01.T01:CDS	40.0%
	CAACTTAGCAATAATCCCCT+CGG	+	Chr8:62693200-62693219	None:intergenic	40.0%
	GAAGTGATGCGAGTGAAAAA+GGG	-	Chr8:62692885-62692904	MsG0880045684.01.T01:CDS	40.0%
	GGAACCATCAGCATCATAAT+CGG	+	Chr8:62692924-62692943	None:intergenic	40.0%
	GTTGAAGGAAGCTAAGGATT+TGG	-	Chr8:62693126-62693145	MsG0880045684.01.T01:CDS	40.0%
	TGAAGTGATGCGAGTGAAAA+AGG	-	Chr8:62692884-62692903	MsG0880045684.01.T01:CDS	40.0%
!	ACACCTTTCTTCAAAAGCGT+AGG	+	Chr8:62693163-62693182	None:intergenic	40.0%
!	ATTGCTAAGTTGAAGGAGGT+TGG	-	Chr8:62693208-62693227	MsG0880045684.01.T01:CDS	40.0%
!	GGGGATTATTGCTAAGTTGA+AGG	-	Chr8:62693201-62693220	MsG0880045684.01.T01:CDS	40.0%
!!!	GAAGCTTGATGGTTTTGATG+CGG	-	Chr8:62693054-62693073	MsG0880045684.01.T01:intron	40.0%
	ATGCTGATGGTTCCTGGAAT+GGG	-	Chr8:62692930-62692949	MsG0880045684.01.T01:CDS	45.0%
	ATTCCCCTTATTCCCATTCC+AGG	+	Chr8:62692945-62692964	None:intergenic	45.0%
	GAAGGAAGCTAAGGATTTGG+TGG	-	Chr8:62693129-62693148	MsG0880045684.01.T01:CDS	45.0%
	GCGTTTGATGTGAAGCTTGA+TGG	-	Chr8:62693043-62693062	MsG0880045684.01.T01:intron	45.0%
	GCTTCCGATTATGATGCTGA+TGG	-	Chr8:62692917-62692936	MsG0880045684.01.T01:CDS	45.0%
	GGTTCCTGGAATGGGAATAA+GGG	-	Chr8:62692938-62692957	MsG0880045684.01.T01:CDS	45.0%
	GTTCCTGGAATGGGAATAAG+GGG	-	Chr8:62692939-62692958	MsG0880045684.01.T01:CDS	45.0%
	TGATGCGGCGTCAAAGATTA+AGG	-	Chr8:62693069-62693088	MsG0880045684.01.T01:intron	45.0%
	TGGTTCCTGGAATGGGAATA+AGG	-	Chr8:62692937-62692956	MsG0880045684.01.T01:CDS	45.0%
!	GAAAGGTGTGACGAAAGAAG+AGG	-	Chr8:62693174-62693193	MsG0880045684.01.T01:CDS	45.0%
!	GGTTGGTGCAAAAGCTTCTA+TGG	-	Chr8:62693225-62693244	MsG0880045684.01.T01:CDS	45.0%
!	TTTGGGGTTGAAGGAAGCTA+AGG	-	Chr8:62693120-62693139	MsG0880045684.01.T01:CDS	45.0%
!!	TCGCCTACGCTTTTGAAGAA+AGG	-	Chr8:62693157-62693176	MsG0880045684.01.T01:CDS	45.0%
	GATGCTGATGGTTCCTGGAA+TGG	-	Chr8:62692929-62692948	MsG0880045684.01.T01:CDS	50.0%
	GGGTGAGGTGAAGAAAGTTG+AGG	-	Chr8:62693012-62693031	MsG0880045684.01.T01:CDS	50.0%
!	GGGGTGGTGGTAGTGAAAAA+GGG	-	Chr8:62692991-62693010	MsG0880045684.01.T01:CDS	50.0%
!	GGGTGGTGGTAGTGAAAAAG+GGG	-	Chr8:62692992-62693011	MsG0880045684.01.T01:CDS	50.0%
!	GTGGTAGTGAAAAAGGGGTG+AGG	-	Chr8:62692997-62693016	MsG0880045684.01.T01:CDS	50.0%
	AGGTGTAGGTGGAGGGAAAG+GGG	-	Chr8:62692971-62692990	MsG0880045684.01.T01:CDS	55.0%
	GAGGTGTAGGTGGAGGGAAA+GGG	-	Chr8:62692970-62692989	MsG0880045684.01.T01:CDS	55.0%
	GGAATAAGGGGAATGCCGAG+AGG	-	Chr8:62692951-62692970	MsG0880045684.01.T01:CDS	55.0%
	GTGACGAAAGAAGAGGCCGA+GGG	-	Chr8:62693181-62693200	MsG0880045684.01.T01:CDS	55.0%
	TGACGAAAGAAGAGGCCGAG+GGG	-	Chr8:62693182-62693201	MsG0880045684.01.T01:CDS	55.0%
	TGTGACGAAAGAAGAGGCCG+AGG	-	Chr8:62693180-62693199	MsG0880045684.01.T01:CDS	55.0%
	TTCCCTCCACCTACACCTCT+CGG	+	Chr8:62692969-62692988	None:intergenic	55.0%
!	AGAGGTGTAGGTGGAGGGAA+AGG	-	Chr8:62692969-62692988	MsG0880045684.01.T01:CDS	55.0%
!	GGGGGTGGTGGTAGTGAAAA+AGG	-	Chr8:62692990-62693009	MsG0880045684.01.T01:CDS	55.0%
	GGTGTAGGTGGAGGGAAAGG+GGG	-	Chr8:62692972-62692991	MsG0880045684.01.T01:CDS	60.0%
!	AGGGGAATGCCGAGAGGTGT+AGG	-	Chr8:62692957-62692976	MsG0880045684.01.T01:CDS	60.0%
!	ATGCCGAGAGGTGTAGGTGG+AGG	-	Chr8:62692963-62692982	MsG0880045684.01.T01:CDS	60.0%
!	GGAATGCCGAGAGGTGTAGG+TGG	-	Chr8:62692960-62692979	MsG0880045684.01.T01:CDS	60.0%
!	TGCCGAGAGGTGTAGGTGGA+GGG	-	Chr8:62692964-62692983	MsG0880045684.01.T01:CDS	60.0%
	GTAGGTGGAGGGAAAGGGGG+TGG	-	Chr8:62692975-62692994	MsG0880045684.01.T01:CDS	65.0%
	GGTGGAGGGAAAGGGGGTGG+TGG	-	Chr8:62692978-62692997	MsG0880045684.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	62692873	62693252	62692873	ID=MsG0880045684.01;Name=MsG0880045684.01
Chr8	mRNA	62692873	62693252	62692873	ID=MsG0880045684.01.T01;Parent=MsG0880045684.01;Name=MsG0880045684.01.T01;_AED=0.44;_eAED=0.50;_QI=0\|0\|0\|1\|1\|1\|2\|0\|100
Chr8	exon	62693112	62693252	62693112	ID=MsG0880045684.01.T01:exon:23988;Parent=MsG0880045684.01.T01
Chr8	exon	62692873	62693034	62692873	ID=MsG0880045684.01.T01:exon:23987;Parent=MsG0880045684.01.T01
Chr8	CDS	62693112	62693252	62693112	ID=MsG0880045684.01.T01:cds;Parent=MsG0880045684.01.T01
Chr8	CDS	62692873	62693034	62692873	ID=MsG0880045684.01.T01:cds;Parent=MsG0880045684.01.T01

Gene Sequence	>MsG0880045684.01.T01 ATGGATCTCGTTGAAGTGATGCGAGTGAAAAAGGGAATCAACGAGCTTCCGATTATGATGCTGATGGTTCCTGGAATGGGAATAAGGGGAATGCCGAGAGGTGTAGGTGGAGGGAAAGGGGGTGGTGGTAGTGAAAAAGGGGTTATTAAAGAAGTTAGGAGTTTTACTAGTTTGGGGTTGAAGGAAGCTAAGGATTTGGTGGAGAAATCGCCTACGCTTTTGAAGAAAGGTGTGACGAAAGAAGAGGCCGAGGGGATTATTGCTAAGTTGAAGGAGGTTGGTGCAAAAGCTTCTATGGAATAA
Protein sequence	>MsG0880045684.01.T01 MDLVEVMRVKKGINELPIMMLMVPGMGIRGMPRGVGGGKGGGGSEKGVIKEVRSFTSLGLKEAKDLVEKSPTLLKKGVTKEEAEGIIAKLKEVGAKASME*