AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011189.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011189.01.T01 MTR_7g077830 82.133 375 17 5 1 325 1 375 0.0 580
MsG0280011189.01.T01 MTR_8g030600 74.747 297 46 2 58 325 133 429 1.64e-156 449
MsG0280011189.01.T01 MTR_8g030600 74.747 297 46 2 58 325 133 429 2.20e-155 449
MsG0280011189.01.T01 MTR_3g463080 77.178 241 55 0 85 325 117 357 7.01e-135 394
MsG0280011189.01.T01 MTR_4g116030 42.570 249 137 2 79 322 115 362 3.80e-59 199
MsG0280011189.01.T01 MTR_7g066780 37.037 243 151 1 83 323 103 345 1.06e-54 187
MsG0280011189.01.T01 MTR_5g069630 41.909 241 134 1 89 323 112 352 5.15e-52 180
MsG0280011189.01.T01 MTR_4g030900 34.694 245 142 4 93 321 26 268 1.78e-35 134
MsG0280011189.01.T01 MTR_2g027710 87.037 54 7 0 272 325 59 112 1.98e-27 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011189.01.T01 AT4G00370 62.338 385 82 7 1 325 1 382 1.15e-148 431
MsG0280011189.01.T01 AT2G29650 75.934 241 58 0 85 325 113 353 3.03e-132 384
MsG0280011189.01.T01 AT2G29650 77.682 233 52 0 93 325 9 241 3.77e-132 383
MsG0280011189.01.T01 AT2G29650 75.934 241 58 0 85 325 113 353 3.70e-131 385
MsG0280011189.01.T01 AT2G29650 77.489 231 52 0 95 325 1 231 1.74e-130 379
MsG0280011189.01.T01 AT2G38060 39.271 247 146 2 83 325 107 353 1.47e-59 200
MsG0280011189.01.T01 AT2G38060 39.271 247 146 2 83 325 107 353 5.03e-59 200
MsG0280011189.01.T01 AT3G46980 36.137 321 183 5 25 323 47 367 5.24e-58 197
MsG0280011189.01.T01 AT3G46980 36.137 321 183 5 25 323 47 367 5.57e-58 196
MsG0280011189.01.T01 AT3G46980 36.137 321 183 5 25 323 95 415 1.22e-57 197
MsG0280011189.01.T01 AT5G20380 42.017 238 134 3 89 324 113 348 2.09e-54 187
MsG0280011189.01.T01 AT5G20380 42.017 238 134 3 89 324 165 400 5.87e-54 187
MsG0280011189.01.T01 AT5G44370 34.322 236 150 3 93 325 28 261 4.42e-39 144
MsG0280011189.01.T01 AT3G46980 40.107 187 105 2 144 323 1 187 9.27e-38 139
MsG0280011189.01.T01 AT3G46980 40.107 187 105 2 144 323 1 187 9.27e-38 139
MsG0280011189.01.T01 AT3G46980 40.107 187 105 2 144 323 1 187 9.47e-38 139
MsG0280011189.01.T01 AT3G46980 40.107 187 105 2 144 323 1 187 9.47e-38 139
MsG0280011189.01.T01 AT3G46980 36.066 122 71 2 209 323 2 123 2.94e-16 78.6

Find 103 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAATTATGCGCGCCTTTA+TGG 0.053818 2:+80781120 MsG0280011189.01.T01:CDS
TTATTTCTTCTTTAGATTCT+TGG 0.151809 2:+80780983 MsG0280011189.01.T01:intron
TTTAGATTCTTGGTGGTATA+TGG 0.202523 2:+80780993 MsG0280011189.01.T01:intron
TTCACTTCTTTCATTGCTTC+AGG 0.233451 2:+80779117 MsG0280011189.01.T01:CDS
ACCCCTATTGCTGCAAGAAT+TGG 0.251887 2:+80781085 MsG0280011189.01.T01:CDS
CTAATTATGCGCGCCTTTAT+GGG 0.277010 2:+80781121 MsG0280011189.01.T01:CDS
TCATGCAATCAATCGGGTTC+TGG 0.278364 2:+80782591 MsG0280011189.01.T01:CDS
CAATGTCACAAGAGTTTAAC+TGG 0.281775 2:+80780802 MsG0280011189.01.T01:CDS
TTGGATCCCTTGGAAGTATC+TGG 0.297355 2:+80781763 MsG0280011189.01.T01:CDS
CTGATGGCCACCCAAGGTTT+TGG 0.299035 2:-80781728 None:intergenic
CCGAGATCCGGGTCATCTTT+TGG 0.301202 2:-80781959 None:intergenic
GCGCGCATAATTAGCAAATA+AGG 0.303001 2:-80781112 None:intergenic
TGCTCAGTTGTGTAAGAAAA+AGG 0.312186 2:-80782620 None:intergenic
TTCTATCAAAAGCACCAGTT+TGG 0.314560 2:+80782056 MsG0280011189.01.T01:CDS
GAAGTATCTGGTTTGCCTTT+TGG 0.317092 2:+80781775 MsG0280011189.01.T01:CDS
TCTCTCATTTCTGCCACAAT+TGG 0.327969 2:+80782089 MsG0280011189.01.T01:CDS
CTCTCATTTCTGCCACAATT+GGG 0.349906 2:+80782090 MsG0280011189.01.T01:CDS
TATATTGTCCAAGTGGATTC+CGG 0.366487 2:+80781617 MsG0280011189.01.T01:CDS
GCCCAATTCTTGCAGCAATA+GGG 0.378658 2:-80781087 None:intergenic
CTTGGACAATATATTATTCA+TGG 0.379692 2:-80781607 None:intergenic
GCAAAGGGTTACTCGCAATC+TGG 0.380406 2:-80780161 None:intergenic
AACCTCACCGATTCCCATAA+AGG 0.393601 2:-80781134 None:intergenic
GGGAAGGTAGTGCTAGGATT+TGG 0.398279 2:+80781031 MsG0280011189.01.T01:CDS
CACCTGTCTCGGACATTCCT+TGG 0.398904 2:+80782026 MsG0280011189.01.T01:CDS
TCTATCAAAAGCACCAGTTT+GGG 0.404421 2:+80782057 MsG0280011189.01.T01:CDS
AGCCCAATTCTTGCAGCAAT+AGG 0.405112 2:-80781088 None:intergenic
CAAAAGATGACCCGGATCTC+GGG 0.407606 2:+80781960 MsG0280011189.01.T01:CDS
AACAGGCGAAGCAATTCTAT+TGG 0.419363 2:+80780330 MsG0280011189.01.T01:CDS
CCCCTATTGCTGCAAGAATT+GGG 0.424394 2:+80781086 MsG0280011189.01.T01:CDS
TTAGATTCTTGGTGGTATAT+GGG 0.427769 2:+80780994 MsG0280011189.01.T01:intron
CCTTGGTTCTGTGGTAGGCT+TGG 0.435784 2:+80781686 MsG0280011189.01.T01:CDS
ATGCAGATCATGCAATCAAT+CGG 0.441717 2:+80782584 MsG0280011189.01.T01:intron
CGCGCATAATTAGCAAATAA+GGG 0.442108 2:-80781111 None:intergenic
CTCTGAAACCGGAATCCACT+TGG 0.444371 2:-80781625 None:intergenic
ATGTACCTTGGTTCTGTGGT+AGG 0.445187 2:+80781681 MsG0280011189.01.T01:CDS
TATTGGCATGGCATGCAGTC+AGG 0.447528 2:+80782665 MsG0280011189.01.T01:CDS
CATGCAATCAATCGGGTTCT+GGG 0.448151 2:+80782592 MsG0280011189.01.T01:CDS
AACACCTGCCATGGCAGTAT+TGG 0.451185 2:+80782648 MsG0280011189.01.T01:CDS
TGCTAGGATTTGGAGTTGTA+TGG 0.451224 2:+80781041 MsG0280011189.01.T01:CDS
TTTCTTCTTTAGATTCTTGG+TGG 0.455978 2:+80780986 MsG0280011189.01.T01:intron
CCAAAAGATGACCCGGATCT+CGG 0.456410 2:+80781959 MsG0280011189.01.T01:CDS
GATCTGCTTCTCTCTGAAAC+CGG 0.489510 2:-80781636 None:intergenic
GACAATATATTATTCATGGC+GGG 0.491758 2:-80781603 None:intergenic
ATATATTCTAACATGTGATA+AGG 0.492149 2:+80779015 MsG0280011189.01.T01:five_prime_UTR
CTGGGGCTATCTGCTTACTC+AGG 0.495708 2:+80780863 MsG0280011189.01.T01:CDS
ATTAAACCACTTATAGCCAT+TGG 0.496105 2:-80779081 None:intergenic
GAAAGAAGTGAAGCTTCTGT+TGG 0.499201 2:-80779106 None:intergenic
GTGGCATCTGATGAAGGAAC+AGG 0.503282 2:+80780313 MsG0280011189.01.T01:CDS
TTTCCTCTACCCCGAGATCC+GGG 0.506435 2:-80781970 None:intergenic
ATGCGCGCCTTTATGGGAAT+CGG 0.509572 2:+80781127 MsG0280011189.01.T01:CDS
CCCAATTCTTGCAGCAATAG+GGG 0.513638 2:-80781086 None:intergenic
TTTGATAGAATTAATTTCCA+AGG 0.514333 2:-80782043 None:intergenic
CAGTTAAACTCTTGTGACAT+TGG 0.514473 2:-80780801 None:intergenic
TTCCAAGGAATGTCCGAGAC+AGG 0.516044 2:-80782028 None:intergenic
GCAATTCTATTGGAAGGAAA+CGG 0.516051 2:+80780340 MsG0280011189.01.T01:CDS
TCACTTTCGCTAGTATATAG+TGG 0.520640 2:+80781657 MsG0280011189.01.T01:CDS
TCTCATTTCTGCCACAATTG+GGG 0.520764 2:+80782091 MsG0280011189.01.T01:CDS
TATTATCAACATAGCACCAA+TGG 0.522591 2:+80779065 MsG0280011189.01.T01:exon
TTCTTATCCAAAACCTTGGG+TGG 0.525807 2:+80781721 MsG0280011189.01.T01:CDS
TATATTATTCATGGCGGGCA+TGG 0.526844 2:-80781598 None:intergenic
GAGATTATAAGAGCCCAAAC+TGG 0.527723 2:-80782070 None:intergenic
TGACCCGGATCTCGGGGTAG+AGG 0.528268 2:+80781967 MsG0280011189.01.T01:CDS
ATTGGAAGGAAACGGTTCGC+CGG 0.533564 2:+80780348 MsG0280011189.01.T01:CDS
TGCAGATCATGCAATCAATC+GGG 0.534037 2:+80782585 MsG0280011189.01.T01:intron
GGTATATGGGCAGACAAACT+TGG 0.535648 2:+80781007 MsG0280011189.01.T01:CDS
GATCCTGTGGCATCTGATGA+AGG 0.540723 2:+80780307 MsG0280011189.01.T01:CDS
GATGCCTACATACTACAATC+AGG 0.541839 2:+80782135 MsG0280011189.01.T01:CDS
TGGAGTTGTATGGTGGTCAA+TGG 0.544883 2:+80781051 MsG0280011189.01.T01:CDS
AAATGTATATCAGTTAAGAA+AGG 0.560962 2:+80780092 MsG0280011189.01.T01:CDS
GGCGAAGCAATTCTATTGGA+AGG 0.565577 2:+80780334 MsG0280011189.01.T01:CDS
TAATTTCAGACTGTCATGCA+TGG 0.565924 2:-80778976 None:intergenic
CTCATTTCTGCCACAATTGG+GGG 0.569420 2:+80782092 MsG0280011189.01.T01:CDS
GTATATAGTGGCATGTACCT+TGG 0.570408 2:+80781669 MsG0280011189.01.T01:CDS
GGCAGACAAACTTGGTGGGA+AGG 0.571171 2:+80781015 MsG0280011189.01.T01:CDS
ATAACCTGATTGTAGTATGT+AGG 0.574274 2:-80782139 None:intergenic
CGTATCGAAAACACCTGTCT+CGG 0.576166 2:+80782015 MsG0280011189.01.T01:CDS
AACTGGAACAGTGCAACAGT+TGG 0.576227 2:+80780819 MsG0280011189.01.T01:CDS
TGGCATGTACCTTGGTTCTG+TGG 0.581569 2:+80781677 MsG0280011189.01.T01:CDS
CATGCCAATACTGCCATGGC+AGG 0.582947 2:-80782652 None:intergenic
GGACATTTATTCTATTAACA+TGG 0.583332 2:+80782113 MsG0280011189.01.T01:CDS
TGAATAATATATTGTCCAAG+TGG 0.584068 2:+80781610 MsG0280011189.01.T01:CDS
CTTGGTGGGAAGGTAGTGCT+AGG 0.587627 2:+80781025 MsG0280011189.01.T01:CDS
ATAGCACCAATGGCTATAAG+TGG 0.591240 2:+80779075 MsG0280011189.01.T01:exon
GTTCCTTCATCAGATGCCAC+AGG 0.595225 2:-80780310 None:intergenic
AGCATGTCAAACACCTGCCA+TGG 0.596628 2:+80782639 MsG0280011189.01.T01:CDS
CTGCCATGGCAGTATTGGCA+TGG 0.603211 2:+80782653 MsG0280011189.01.T01:CDS
CGCCTTTATGGGAATCGGTG+AGG 0.604817 2:+80781132 MsG0280011189.01.T01:CDS
AGGCAAACCAGATACTTCCA+AGG 0.606900 2:-80781770 None:intergenic
TGAGAACTGAAAGGTGAGAG+TGG 0.622436 2:-80779038 None:intergenic
TATGGGCAGACAAACTTGGT+GGG 0.623534 2:+80781011 MsG0280011189.01.T01:CDS
ATATGGGCAGACAAACTTGG+TGG 0.628033 2:+80781010 MsG0280011189.01.T01:CDS
TAGGATTTGGAGTTGTATGG+TGG 0.635420 2:+80781044 MsG0280011189.01.T01:CDS
TAGCTCACCAAAAGATGACC+CGG 0.637431 2:+80781952 MsG0280011189.01.T01:CDS
AAAAGATGACCCGGATCTCG+GGG 0.643756 2:+80781961 MsG0280011189.01.T01:CDS
CCAAACGAGTAAAACACTGA+TGG 0.647346 2:-80781744 None:intergenic
GGACAATATATTATTCATGG+CGG 0.648434 2:-80781604 None:intergenic
GGCAAACCAGATACTTCCAA+GGG 0.659415 2:-80781769 None:intergenic
ATGCCATGCCAATACTGCCA+TGG 0.660274 2:-80782656 None:intergenic
AAAACACTGATGGCCACCCA+AGG 0.665588 2:-80781734 None:intergenic
AAGGATCTATCACTTCAAAG+AGG 0.667820 2:+80780111 MsG0280011189.01.T01:CDS
ATATGACATTGATGAAACGA+AGG 0.676264 2:+80780282 MsG0280011189.01.T01:CDS
TGAAACGAAGGTAGATCCTG+TGG 0.681518 2:+80780294 MsG0280011189.01.T01:CDS
CCAAGCCTACCACAGAACCA+AGG 0.711808 2:-80781686 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTTATTTTTTTT+TGG - Chr2:80779672-80779691 None:intergenic 0.0%
!! AAAAAATAAAATGAATTTAG+TGG - Chr2:80779170-80779189 None:intergenic 10.0%
!!! TTTTTAAATAAAAAATTTGG+TGG + Chr2:80779221-80779240 MsG0280011189.01.T01:intron 10.0%
!! AAAAATTAATACAAAAAGAC+AGG - Chr2:80779317-80779336 None:intergenic 15.0%
!! AAAATAAAAAAAATAACACG+TGG + Chr2:80779676-80779695 MsG0280011189.01.T01:intron 15.0%
!!! ATTTTGTAGTTTTTTTCTTA+GGG - Chr2:80779605-80779624 None:intergenic 15.0%
!!! TGATATTTTGATAAAAACTA+TGG + Chr2:80779485-80779504 MsG0280011189.01.T01:intron 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG + Chr2:80779786-80779805 MsG0280011189.01.T01:intron 15.0%
!! AAATGTATATCAGTTAAGAA+AGG + Chr2:80780092-80780111 MsG0280011189.01.T01:CDS 20.0%
!! AAATGTATTATACAAAGCAT+TGG - Chr2:80782168-80782187 None:intergenic 20.0%
!! ATAACATTGTTATGTTATGA+TGG + Chr2:80780959-80780978 MsG0280011189.01.T01:intron 20.0%
!! ATATATTCTAACATGTGATA+AGG + Chr2:80779015-80779034 MsG0280011189.01.T01:five_prime_UTR 20.0%
!! CATTACTCTAATTAAAGTAA+AGG - Chr2:80779860-80779879 None:intergenic 20.0%
!! GAATTAATGTTAGTTATGTA+TGG + Chr2:80781455-80781474 MsG0280011189.01.T01:intron 20.0%
!! TAATAAAAATGAGAACTGAA+AGG - Chr2:80779050-80779069 None:intergenic 20.0%
!! TAATACAATTCATAAAATGC+TGG - Chr2:80779250-80779269 None:intergenic 20.0%
!! TTTGATAGAATTAATTTCCA+AGG - Chr2:80782046-80782065 None:intergenic 20.0%
!!! AAGATATTTTCTCTTTTGAA+TGG + Chr2:80781323-80781342 MsG0280011189.01.T01:intron 20.0%
!!! GATTTTGTAGTTTTTTTCTT+AGG - Chr2:80779606-80779625 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG + Chr2:80779785-80779804 MsG0280011189.01.T01:intron 20.0%
!!! TGAATACAACTTAATTTGTT+TGG - Chr2:80781288-80781307 None:intergenic 20.0%
!!! TTATTTCTTCTTTAGATTCT+TGG + Chr2:80780983-80781002 MsG0280011189.01.T01:intron 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG + Chr2:80779787-80779806 MsG0280011189.01.T01:intron 20.0%
!!! TTTTATTTTTTTTTGGCCTT+GGG - Chr2:80779665-80779684 None:intergenic 20.0%
!!! TTTTGTAGTTTTTTTCTTAG+GGG - Chr2:80779604-80779623 None:intergenic 20.0%
!!! TTTTTATTTTTTTTTGGCCT+TGG - Chr2:80779666-80779685 None:intergenic 20.0%
! AAGAGAAAATATCTTCGATT+TGG - Chr2:80781318-80781337 None:intergenic 25.0%
! ACCTGTATATTACAATATGA+AGG - Chr2:80780759-80780778 None:intergenic 25.0%
! AGGACTTGTATAAATTAGTT+TGG + Chr2:80779914-80779933 MsG0280011189.01.T01:intron 25.0%
! AGTAGATTTCATCGAAATTA+AGG - Chr2:80781824-80781843 None:intergenic 25.0%
! ATTGTAAAACACAACTACAT+TGG - Chr2:80780690-80780709 None:intergenic 25.0%
! ATTTGTAATAGTTGTTGATC+TGG - Chr2:80782475-80782494 None:intergenic 25.0%
! CTACAATCATATTACAAATG+AGG - Chr2:80780051-80780070 None:intergenic 25.0%
! CTTGGACAATATATTATTCA+TGG - Chr2:80781610-80781629 None:intergenic 25.0%
! CTTTCTTTGTAGTTTACTTT+AGG + Chr2:80779530-80779549 MsG0280011189.01.T01:intron 25.0%
! GATTCAATGGAGTAATAAAT+GGG - Chr2:80782255-80782274 None:intergenic 25.0%
! GCTATTCATGATATGTTAAA+GGG + Chr2:80781871-80781890 MsG0280011189.01.T01:intron 25.0%
! GGACATTTATTCTATTAACA+TGG + Chr2:80782113-80782132 MsG0280011189.01.T01:CDS 25.0%
! GTAGATTTCATCGAAATTAA+GGG - Chr2:80781823-80781842 None:intergenic 25.0%
! TAACATAACAATGTTATGCT+AGG - Chr2:80780956-80780975 None:intergenic 25.0%
! TCCTTCATATTGTAATATAC+AGG + Chr2:80780755-80780774 MsG0280011189.01.T01:intron 25.0%
! TGAATAATATATTGTCCAAG+TGG + Chr2:80781610-80781629 MsG0280011189.01.T01:CDS 25.0%
! TGATTCAATGGAGTAATAAA+TGG - Chr2:80782256-80782275 None:intergenic 25.0%
! TTCATAGCAAAACTGATAAT+TGG - Chr2:80781240-80781259 None:intergenic 25.0%
!! ATTGAACAAAGAGAAGTATA+CGG + Chr2:80780200-80780219 MsG0280011189.01.T01:intron 25.0%
!! CAAAGCATGGATATTATTTT+AGG + Chr2:80779894-80779913 MsG0280011189.01.T01:intron 25.0%
!!! AATGCAAACTATTTGTTTTC+AGG + Chr2:80781569-80781588 MsG0280011189.01.T01:intron 25.0%
!!! AATTCAGTCATCTTTTTTCT+GGG + Chr2:80780845-80780864 MsG0280011189.01.T01:CDS 25.0%
!!! ATGCAAACTATTTGTTTTCA+GGG + Chr2:80781570-80781589 MsG0280011189.01.T01:intron 25.0%
!!! GGATCACTATATTTTAAACT+AGG + Chr2:80779975-80779994 MsG0280011189.01.T01:intron 25.0%
!!! TAATTCAGTCATCTTTTTTC+TGG + Chr2:80780844-80780863 MsG0280011189.01.T01:CDS 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG + Chr2:80779788-80779807 MsG0280011189.01.T01:intron 25.0%
!!! TTTATTTTTTTTTGGCCTTG+GGG - Chr2:80779664-80779683 None:intergenic 25.0%
AAGATATATGACAGTGTGTT+TGG - Chr2:80780644-80780663 None:intergenic 30.0%
AATATTTGCAAAAACAGCCA+TGG - Chr2:80782359-80782378 None:intergenic 30.0%
AATGTTAGTTATGTATGGAG+TGG + Chr2:80781460-80781479 MsG0280011189.01.T01:intron 30.0%
ACATATCATGAATAGCGATA+TGG - Chr2:80781867-80781886 None:intergenic 30.0%
ATAACCTGATTGTAGTATGT+AGG - Chr2:80782142-80782161 None:intergenic 30.0%
ATATGACATTGATGAAACGA+AGG + Chr2:80780282-80780301 MsG0280011189.01.T01:CDS 30.0%
ATCCTACAATTTCATTGCAA+AGG - Chr2:80782219-80782238 None:intergenic 30.0%
ATGTTAGTTATGTATGGAGT+GGG + Chr2:80781461-80781480 MsG0280011189.01.T01:intron 30.0%
ATTAAACCACTTATAGCCAT+TGG - Chr2:80779084-80779103 None:intergenic 30.0%
CATTCTATAGCAATATTACC+TGG + Chr2:80781161-80781180 MsG0280011189.01.T01:intron 30.0%
CCACATAAACCAAAATTAGA+GGG - Chr2:80779957-80779976 None:intergenic 30.0%
CGCTATTCATGATATGTTAA+AGG + Chr2:80781870-80781889 MsG0280011189.01.T01:intron 30.0%
CTATGTGTACAATGTATGTT+TGG + Chr2:80780493-80780512 MsG0280011189.01.T01:intron 30.0%
GACAATATATTATTCATGGC+GGG - Chr2:80781606-80781625 None:intergenic 30.0%
GACAATATTTCAGTAACAAG+TGG - Chr2:80782449-80782468 None:intergenic 30.0%
GGACAATATATTATTCATGG+CGG - Chr2:80781607-80781626 None:intergenic 30.0%
TAACATACAAATACAGCTTG+TGG - Chr2:80781405-80781424 None:intergenic 30.0%
TAACCATATGAACTAGTTAC+TGG - Chr2:80781189-80781208 None:intergenic 30.0%
TACCTTTGCAATGAAATTGT+AGG + Chr2:80782214-80782233 MsG0280011189.01.T01:intron 30.0%
TAGTGGAAAATTGAAAGTGA+TGG - Chr2:80779153-80779172 None:intergenic 30.0%
TATTATCAACATAGCACCAA+TGG + Chr2:80779065-80779084 MsG0280011189.01.T01:exon 30.0%
TATTCTGCTCATAATACTTG+TGG + Chr2:80782556-80782575 MsG0280011189.01.T01:intron 30.0%
TCATGATATGTTAAAGGGAA+GGG + Chr2:80781876-80781895 MsG0280011189.01.T01:intron 30.0%
TCCACATAAACCAAAATTAG+AGG - Chr2:80779958-80779977 None:intergenic 30.0%
TCTTACCATGAAAAGTTTGT+GGG - Chr2:80779398-80779417 None:intergenic 30.0%
TGCATTATCTTGTGTTAAGA+GGG - Chr2:80781555-80781574 None:intergenic 30.0%
TGCTACAAATGCAAAACTTA+GGG - Chr2:80779632-80779651 None:intergenic 30.0%
TGTACAATGTATGTTTGGAT+TGG + Chr2:80780498-80780517 MsG0280011189.01.T01:intron 30.0%
TTAGTAAGCTATACTCTACA+CGG - Chr2:80781364-80781383 None:intergenic 30.0%
TTCATGATATGTTAAAGGGA+AGG + Chr2:80781875-80781894 MsG0280011189.01.T01:intron 30.0%
TTGACATCACTTTCTATAGT+TGG + Chr2:80782188-80782207 MsG0280011189.01.T01:intron 30.0%
TTGCATTATCTTGTGTTAAG+AGG - Chr2:80781556-80781575 None:intergenic 30.0%
TTGTAGTACCTCTTTGATAT+TGG + Chr2:80780065-80780084 MsG0280011189.01.T01:intron 30.0%
TTTCTTCTTTAGATTCTTGG+TGG + Chr2:80780986-80781005 MsG0280011189.01.T01:intron 30.0%
! ACTAGGCTTAAATGTAGTTT+TGG + Chr2:80779992-80780011 MsG0280011189.01.T01:intron 30.0%
! AGCTTTTCTTTTATGCAACA+TGG + Chr2:80780429-80780448 MsG0280011189.01.T01:intron 30.0%
! AGTTGATTGATCATTTTACC+AGG + Chr2:80782279-80782298 MsG0280011189.01.T01:intron 30.0%
! ATTTTCCCACAAACTTTTCA+TGG + Chr2:80779390-80779409 MsG0280011189.01.T01:intron 30.0%
! CTTTTCTTATCCAAAACCTT+GGG + Chr2:80781718-80781737 MsG0280011189.01.T01:CDS 30.0%
! GTTTTGCATAACACAAAAGA+TGG - Chr2:80781218-80781237 None:intergenic 30.0%
! TACATTGGAAATTTGAGACA+TGG - Chr2:80780675-80780694 None:intergenic 30.0%
! TTAGATTCTTGGTGGTATAT+GGG + Chr2:80780994-80781013 MsG0280011189.01.T01:intron 30.0%
! TTTAGATTCTTGGTGGTATA+TGG + Chr2:80780993-80781012 MsG0280011189.01.T01:intron 30.0%
! TTTTGCATTTGTAGCAGTTT+TGG + Chr2:80779636-80779655 MsG0280011189.01.T01:intron 30.0%
!! ACTTACTTTTCTCAACCAAA+AGG - Chr2:80781793-80781812 None:intergenic 30.0%
!! CAATCAACTTGTTGATTCAA+TGG - Chr2:80782268-80782287 None:intergenic 30.0%
!! TGTTTTTGCAAATATTGGAG+TGG + Chr2:80782363-80782382 MsG0280011189.01.T01:intron 30.0%
!!! ATGACTTCTACTTTTTGCAA+AGG - Chr2:80780180-80780199 None:intergenic 30.0%
!!! ATGGCTGTTTTTGCAAATAT+TGG + Chr2:80782358-80782377 MsG0280011189.01.T01:intron 30.0%
!!! ATTCAGTCATCTTTTTTCTG+GGG + Chr2:80780846-80780865 MsG0280011189.01.T01:CDS 30.0%
!!! TGACTTCTACTTTTTGCAAA+GGG - Chr2:80780179-80780198 None:intergenic 30.0%
!!! TTATTTTTTTTTGGCCTTGG+GGG - Chr2:80779663-80779682 None:intergenic 30.0%
AAATATTGCCACCATCCAAA+AGG - Chr2:80779447-80779466 None:intergenic 35.0%
AACTTTCCAAAGTTGCGATT+TGG - Chr2:80779814-80779833 None:intergenic 35.0%
AAGGATCTATCACTTCAAAG+AGG + Chr2:80780111-80780130 MsG0280011189.01.T01:CDS 35.0%
AATATTGCCACCATCCAAAA+GGG - Chr2:80779446-80779465 None:intergenic 35.0%
ACCAAGATAAGATACTCACA+CGG - Chr2:80780456-80780475 None:intergenic 35.0%
ACCTTTGCTAACTAATGTGT+CGG - Chr2:80782393-80782412 None:intergenic 35.0%
AGAATCACAGTGCAAAATCA+CGG - Chr2:80780603-80780622 None:intergenic 35.0%
AGTAAACTCATTTCCTTTCC+AGG + Chr2:80781925-80781944 MsG0280011189.01.T01:intron 35.0%
ATCGCAACTTCGTTAAAGTT+AGG - Chr2:80779576-80779595 None:intergenic 35.0%
ATGCAGATCATGCAATCAAT+CGG + Chr2:80782584-80782603 MsG0280011189.01.T01:intron 35.0%
ATTTCCTGCCAATATCAAAG+AGG - Chr2:80780076-80780095 None:intergenic 35.0%
CAATGTCACAAGAGTTTAAC+TGG + Chr2:80780802-80780821 MsG0280011189.01.T01:CDS 35.0%
CAGTTAAACTCTTGTGACAT+TGG - Chr2:80780804-80780823 None:intergenic 35.0%
CATGATATGTTAAAGGGAAG+GGG + Chr2:80781877-80781896 MsG0280011189.01.T01:intron 35.0%
CGCGCATAATTAGCAAATAA+GGG - Chr2:80781114-80781133 None:intergenic 35.0%
CTACAAATGCAAAACTTAGG+GGG - Chr2:80779630-80779649 None:intergenic 35.0%
CTCTTACCATGAAAAGTTTG+TGG - Chr2:80779399-80779418 None:intergenic 35.0%
CTGCTACAAATGCAAAACTT+AGG - Chr2:80779633-80779652 None:intergenic 35.0%
CTTGCAAGAAAGAACAAAAG+AGG - Chr2:80781907-80781926 None:intergenic 35.0%
GAAAAAAAGCTCATCCTTGA+AGG + Chr2:80781989-80782008 MsG0280011189.01.T01:CDS 35.0%
GCAATTCTATTGGAAGGAAA+CGG + Chr2:80780340-80780359 MsG0280011189.01.T01:CDS 35.0%
GCTACAAATGCAAAACTTAG+GGG - Chr2:80779631-80779650 None:intergenic 35.0%
GTTCCAGTAACTAGTTCATA+TGG + Chr2:80781183-80781202 MsG0280011189.01.T01:intron 35.0%
TAATTTCAGACTGTCATGCA+TGG - Chr2:80778979-80778998 None:intergenic 35.0%
TACCTTTCGAACAGTTGTTA+TGG - Chr2:80782420-80782439 None:intergenic 35.0%
TCACTTTCGCTAGTATATAG+TGG + Chr2:80781657-80781676 MsG0280011189.01.T01:CDS 35.0%
TCAGTTGTGTAAGAAAAAGG+CGG - Chr2:80782620-80782639 None:intergenic 35.0%
TCGCAACTTCGTTAAAGTTA+GGG - Chr2:80779575-80779594 None:intergenic 35.0%
TGCAAAGAGTGAAATGAATC+CGG - Chr2:80782535-80782554 None:intergenic 35.0%
TGCTCAGTTGTGTAAGAAAA+AGG - Chr2:80782623-80782642 None:intergenic 35.0%
TGGAAAATTGAAAGTGATGG+AGG - Chr2:80779150-80779169 None:intergenic 35.0%
TTAACAGAATGCCGTATAGA+AGG + Chr2:80782502-80782521 MsG0280011189.01.T01:intron 35.0%
TTCACTTCTTTCATTGCTTC+AGG + Chr2:80779117-80779136 MsG0280011189.01.T01:CDS 35.0%
TTCCATAACAACTGTTCGAA+AGG + Chr2:80782415-80782434 MsG0280011189.01.T01:intron 35.0%
! AATCGCAACTTTGGAAAGTT+AGG + Chr2:80779814-80779833 MsG0280011189.01.T01:intron 35.0%
! ATCGCAACTTTGGAAAGTTA+GGG + Chr2:80779815-80779834 MsG0280011189.01.T01:intron 35.0%
! CACAAACTTTTCATGGTAAG+AGG + Chr2:80779397-80779416 MsG0280011189.01.T01:intron 35.0%
! CCTTTTCTTATCCAAAACCT+TGG + Chr2:80781717-80781736 MsG0280011189.01.T01:CDS 35.0%
! CTTTAACGAAGTTGCGATTT+TGG + Chr2:80779578-80779597 MsG0280011189.01.T01:intron 35.0%
! TATATTGTCCAAGTGGATTC+CGG + Chr2:80781617-80781636 MsG0280011189.01.T01:CDS 35.0%
!! ATGTATGTTTGGATTGGTGA+CGG + Chr2:80780504-80780523 MsG0280011189.01.T01:intron 35.0%
!! TCTATCAAAAGCACCAGTTT+GGG + Chr2:80782057-80782076 MsG0280011189.01.T01:CDS 35.0%
!! TTCTATCAAAAGCACCAGTT+TGG + Chr2:80782056-80782075 MsG0280011189.01.T01:CDS 35.0%
!!! CCAAGGTTTTGGATAAGAAA+AGG - Chr2:80781720-80781739 None:intergenic 35.0%
!!! CCCTCTAATTTTGGTTTATG+TGG + Chr2:80779954-80779973 MsG0280011189.01.T01:intron 35.0%
!!! TATTTTTTTTTGGCCTTGGG+GGG - Chr2:80779662-80779681 None:intergenic 35.0%
AAAAAGCTCATCCTTGAAGG+CGG + Chr2:80781992-80782011 MsG0280011189.01.T01:CDS 40.0%
AAAACAGCCATGGTTAACCA+CGG - Chr2:80782349-80782368 None:intergenic 40.0%
AACACATAAGAGCCCAGATT+CGG - Chr2:80782323-80782342 None:intergenic 40.0%
AACAGGCGAAGCAATTCTAT+TGG + Chr2:80780330-80780349 MsG0280011189.01.T01:CDS 40.0%
AATCGCGAATCGGTGAAAAT+AGG - Chr2:80780021-80780040 None:intergenic 40.0%
ACCGTGTGAGTATCTTATCT+TGG + Chr2:80780452-80780471 MsG0280011189.01.T01:intron 40.0%
AGGCAACTAAAATCGCGAAT+CGG - Chr2:80780031-80780050 None:intergenic 40.0%
AGTACCTCTTTGATATTGGC+AGG + Chr2:80780069-80780088 MsG0280011189.01.T01:intron 40.0%
ATAGCACCAATGGCTATAAG+TGG + Chr2:80779075-80779094 MsG0280011189.01.T01:exon 40.0%
ATCGCGAATCGGTGAAAATA+GGG - Chr2:80780020-80780039 None:intergenic 40.0%
ATGAACTAGTTACTGGAACC+AGG - Chr2:80781182-80781201 None:intergenic 40.0%
CAGTTGTGTAAGAAAAAGGC+GGG - Chr2:80782619-80782638 None:intergenic 40.0%
CCAAAATTAGAGGGTTCAAG+AGG - Chr2:80779948-80779967 None:intergenic 40.0%
CCAAACGAGTAAAACACTGA+TGG - Chr2:80781747-80781766 None:intergenic 40.0%
CCGGACAATTTCCTTCTATA+CGG - Chr2:80782516-80782535 None:intergenic 40.0%
CCGTATAGAAGGAAATTGTC+CGG + Chr2:80782513-80782532 MsG0280011189.01.T01:intron 40.0%
CGCAACTTCGTTAAAGTTAG+GGG - Chr2:80779574-80779593 None:intergenic 40.0%
CTAATTATGCGCGCCTTTAT+GGG + Chr2:80781121-80781140 MsG0280011189.01.T01:CDS 40.0%
CTCTCATTTCTGCCACAATT+GGG + Chr2:80782090-80782109 MsG0280011189.01.T01:CDS 40.0%
GAAAGAAGTGAAGCTTCTGT+TGG - Chr2:80779109-80779128 None:intergenic 40.0%
GAATAAATGTCCCCCAATTG+TGG - Chr2:80782105-80782124 None:intergenic 40.0%
GAGATTATAAGAGCCCAAAC+TGG - Chr2:80782073-80782092 None:intergenic 40.0%
GATGCCTACATACTACAATC+AGG + Chr2:80782135-80782154 MsG0280011189.01.T01:CDS 40.0%
GCAACTTCGTTAAAGTTAGG+GGG - Chr2:80779573-80779592 None:intergenic 40.0%
GCGCGCATAATTAGCAAATA+AGG - Chr2:80781115-80781134 None:intergenic 40.0%
GGTGGCAATATTTGTCTATG+TGG + Chr2:80779454-80779473 MsG0280011189.01.T01:intron 40.0%
GTATATAGTGGCATGTACCT+TGG + Chr2:80781669-80781688 MsG0280011189.01.T01:CDS 40.0%
TCTCATTTCTGCCACAATTG+GGG + Chr2:80782091-80782110 MsG0280011189.01.T01:CDS 40.0%
TCTCTCATTTCTGCCACAAT+TGG + Chr2:80782089-80782108 MsG0280011189.01.T01:CDS 40.0%
TGCAGATCATGCAATCAATC+GGG + Chr2:80782585-80782604 MsG0280011189.01.T01:intron 40.0%
TGCCACAAGTGCAAAACTTA+GGG + Chr2:80779760-80779779 MsG0280011189.01.T01:intron 40.0%
TTCTTATCCAAAACCTTGGG+TGG + Chr2:80781721-80781740 MsG0280011189.01.T01:CDS 40.0%
! CAAAGAGAAGTATACGGACT+AGG + Chr2:80780206-80780225 MsG0280011189.01.T01:intron 40.0%
! CCATCAGTGTTTTACTCGTT+TGG + Chr2:80781744-80781763 MsG0280011189.01.T01:CDS 40.0%
! CCTCTTGAACCCTCTAATTT+TGG + Chr2:80779945-80779964 MsG0280011189.01.T01:intron 40.0%
! TAGGATTTGGAGTTGTATGG+TGG + Chr2:80781044-80781063 MsG0280011189.01.T01:CDS 40.0%
! TCGCAACTTTGGAAAGTTAG+GGG + Chr2:80779816-80779835 MsG0280011189.01.T01:intron 40.0%
! TGACAGTGTGTTTGGATTAG+CGG - Chr2:80780636-80780655 None:intergenic 40.0%
! TGCTAGGATTTGGAGTTGTA+TGG + Chr2:80781041-80781060 MsG0280011189.01.T01:CDS 40.0%
! TTTTACTCGTTTGGATCCCT+TGG + Chr2:80781753-80781772 MsG0280011189.01.T01:CDS 40.0%
! TTTTGCACTTGTGGCAGTTT+TGG - Chr2:80779756-80779775 None:intergenic 40.0%
!! GAAGTATCTGGTTTGCCTTT+TGG + Chr2:80781775-80781794 MsG0280011189.01.T01:CDS 40.0%
!! TATATTATTCATGGCGGGCA+TGG - Chr2:80781601-80781620 None:intergenic 40.0%
!!! AGCGTTTTTAGTGTTCAGTC+TGG + Chr2:80780135-80780154 MsG0280011189.01.T01:CDS 40.0%
!!! GTTTTTAGTGTTCAGTCTGG+TGG + Chr2:80780138-80780157 MsG0280011189.01.T01:CDS 40.0%
AACTGGAACAGTGCAACAGT+TGG + Chr2:80780819-80780838 MsG0280011189.01.T01:CDS 45.0%
AAGTTCAACCTCACCGAATC+TGG + Chr2:80782307-80782326 MsG0280011189.01.T01:intron 45.0%
AATCACACAGCACATGCATC+AGG - Chr2:80780547-80780566 None:intergenic 45.0%
ACCCCTATTGCTGCAAGAAT+TGG + Chr2:80781085-80781104 MsG0280011189.01.T01:CDS 45.0%
AGCCCAATTCTTGCAGCAAT+AGG - Chr2:80781091-80781110 None:intergenic 45.0%
AGCGTAGACCGAGTCAAAAT+TGG + Chr2:80779722-80779741 MsG0280011189.01.T01:intron 45.0%
AGGCAAACCAGATACTTCCA+AGG - Chr2:80781773-80781792 None:intergenic 45.0%
AGTTCAACCTCACCGAATCT+GGG + Chr2:80782308-80782327 MsG0280011189.01.T01:intron 45.0%
ATATGGGCAGACAAACTTGG+TGG + Chr2:80781010-80781029 MsG0280011189.01.T01:CDS 45.0%
ATTACGATAAGCCAGCGCTT+AGG - Chr2:80780397-80780416 None:intergenic 45.0%
CACAAGTGCAAAACTTAGGG+CGG + Chr2:80779763-80779782 MsG0280011189.01.T01:intron 45.0%
CATGCAATCAATCGGGTTCT+GGG + Chr2:80782592-80782611 MsG0280011189.01.T01:CDS 45.0%
CCCAATTCTTGCAGCAATAG+GGG - Chr2:80781089-80781108 None:intergenic 45.0%
CCCCTATTGCTGCAAGAATT+GGG + Chr2:80781086-80781105 MsG0280011189.01.T01:CDS 45.0%
CGTATCGAAAACACCTGTCT+CGG + Chr2:80782015-80782034 MsG0280011189.01.T01:CDS 45.0%
CTCATTTCTGCCACAATTGG+GGG + Chr2:80782092-80782111 MsG0280011189.01.T01:CDS 45.0%
CTGCCACAAGTGCAAAACTT+AGG + Chr2:80779759-80779778 MsG0280011189.01.T01:intron 45.0%
GCCCAATTCTTGCAGCAATA+GGG - Chr2:80781090-80781109 None:intergenic 45.0%
GCCGACACATTAGTTAGCAA+AGG + Chr2:80782389-80782408 MsG0280011189.01.T01:intron 45.0%
GCTAATTATGCGCGCCTTTA+TGG + Chr2:80781120-80781139 MsG0280011189.01.T01:CDS 45.0%
GGCAAACCAGATACTTCCAA+GGG - Chr2:80781772-80781791 None:intergenic 45.0%
GGCGAAGCAATTCTATTGGA+AGG + Chr2:80780334-80780353 MsG0280011189.01.T01:CDS 45.0%
GGTATATGGGCAGACAAACT+TGG + Chr2:80781007-80781026 MsG0280011189.01.T01:CDS 45.0%
TAGCTCACCAAAAGATGACC+CGG + Chr2:80781952-80781971 MsG0280011189.01.T01:CDS 45.0%
TATGGGCAGACAAACTTGGT+GGG + Chr2:80781011-80781030 MsG0280011189.01.T01:CDS 45.0%
TCATGCAATCAATCGGGTTC+TGG + Chr2:80782591-80782610 MsG0280011189.01.T01:CDS 45.0%
TCCAAAAGGGTCATCAGCAT+TGG - Chr2:80779433-80779452 None:intergenic 45.0%
TCGCGAATCGGTGAAAATAG+GGG - Chr2:80780019-80780038 None:intergenic 45.0%
TGAAACGAAGGTAGATCCTG+TGG + Chr2:80780294-80780313 MsG0280011189.01.T01:CDS 45.0%
TGAGAACTGAAAGGTGAGAG+TGG - Chr2:80779041-80779060 None:intergenic 45.0%
TGAGGTTGAACTTCAGAACC+TGG - Chr2:80782300-80782319 None:intergenic 45.0%
TGCTGATGTTCAGCAAAGCA+TGG + Chr2:80779881-80779900 MsG0280011189.01.T01:intron 45.0%
TGGAGTTGTATGGTGGTCAA+TGG + Chr2:80781051-80781070 MsG0280011189.01.T01:CDS 45.0%
TGTTCTTCCGTGGTTAACCA+TGG + Chr2:80782339-80782358 MsG0280011189.01.T01:intron 45.0%
TTTATGGGAATCGGTGAGGT+TGG + Chr2:80781136-80781155 MsG0280011189.01.T01:intron 45.0%
! ATGCTGATGACCCTTTTGGA+TGG + Chr2:80779433-80779452 MsG0280011189.01.T01:intron 45.0%
! CGCAACTTTGGAAAGTTAGG+GGG + Chr2:80779817-80779836 MsG0280011189.01.T01:intron 45.0%
! CTTTTGGTGAGCTATATGCC+TGG - Chr2:80781946-80781965 None:intergenic 45.0%
! TCCAATGCTGATGACCCTTT+TGG + Chr2:80779429-80779448 MsG0280011189.01.T01:intron 45.0%
!! AACCTCACCGATTCCCATAA+AGG - Chr2:80781137-80781156 None:intergenic 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG + Chr2:80779729-80779748 MsG0280011189.01.T01:intron 45.0%
!! ATGTACCTTGGTTCTGTGGT+AGG + Chr2:80781681-80781700 MsG0280011189.01.T01:CDS 45.0%
!! GATCTGCTTCTCTCTGAAAC+CGG - Chr2:80781639-80781658 None:intergenic 45.0%
!! TTGGATCCCTTGGAAGTATC+TGG + Chr2:80781763-80781782 MsG0280011189.01.T01:CDS 45.0%
!!! CAATTTTTAAATAAAAAATT+TGG + Chr2:80779218-80779237 MsG0280011189.01.T01:intron 5.0%
AAAACACTGATGGCCACCCA+AGG - Chr2:80781737-80781756 None:intergenic 50.0%
AAAAGATGACCCGGATCTCG+GGG + Chr2:80781961-80781980 MsG0280011189.01.T01:CDS 50.0%
AACACCTGCCATGGCAGTAT+TGG + Chr2:80782648-80782667 MsG0280011189.01.T01:CDS 50.0%
AACACGTGGCACCTCACTTA+GGG + Chr2:80779690-80779709 MsG0280011189.01.T01:intron 50.0%
AGCATGTCAAACACCTGCCA+TGG + Chr2:80782639-80782658 MsG0280011189.01.T01:CDS 50.0%
ATGCCATGCCAATACTGCCA+TGG - Chr2:80782659-80782678 None:intergenic 50.0%
ATGCGCGCCTTTATGGGAAT+CGG + Chr2:80781127-80781146 MsG0280011189.01.T01:CDS 50.0%
ATTGGAAGGAAACGGTTCGC+CGG + Chr2:80780348-80780367 MsG0280011189.01.T01:CDS 50.0%
CAAAAGATGACCCGGATCTC+GGG + Chr2:80781960-80781979 MsG0280011189.01.T01:CDS 50.0%
CCAAAAGATGACCCGGATCT+CGG + Chr2:80781959-80781978 MsG0280011189.01.T01:CDS 50.0%
GATCCTGTGGCATCTGATGA+AGG + Chr2:80780307-80780326 MsG0280011189.01.T01:CDS 50.0%
GCAAAGGGTTACTCGCAATC+TGG - Chr2:80780164-80780183 None:intergenic 50.0%
GGCTCTTATGTGTTCTTCCG+TGG + Chr2:80782329-80782348 MsG0280011189.01.T01:intron 50.0%
GGGAAGGTAGTGCTAGGATT+TGG + Chr2:80781031-80781050 MsG0280011189.01.T01:CDS 50.0%
GGTGAGCTATATGCCTGGAA+AGG - Chr2:80781941-80781960 None:intergenic 50.0%
GTGGCATCTGATGAAGGAAC+AGG + Chr2:80780313-80780332 MsG0280011189.01.T01:CDS 50.0%
GTTCCTTCATCAGATGCCAC+AGG - Chr2:80780313-80780332 None:intergenic 50.0%
TAACACGTGGCACCTCACTT+AGG + Chr2:80779689-80779708 MsG0280011189.01.T01:intron 50.0%
TATTGGCATGGCATGCAGTC+AGG + Chr2:80782665-80782684 MsG0280011189.01.T01:CDS 50.0%
TTCCAAGGAATGTCCGAGAC+AGG - Chr2:80782031-80782050 None:intergenic 50.0%
! CGCCCTAAGTTTTGCACTTG+TGG - Chr2:80779765-80779784 None:intergenic 50.0%
! CTGATGACCCTTTTGGATGG+TGG + Chr2:80779436-80779455 MsG0280011189.01.T01:intron 50.0%
! GACCGAGTCAAAATTGGCCT+TGG + Chr2:80779728-80779747 MsG0280011189.01.T01:intron 50.0%
! TTTTCCTCTACCCCGAGATC+CGG - Chr2:80781974-80781993 None:intergenic 50.0%
! TTTTCGATACGCCGCCTTCA+AGG - Chr2:80782006-80782025 None:intergenic 50.0%
!! ATAAGAGCCCAGATTCGGTG+AGG - Chr2:80782318-80782337 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG + Chr2:80779730-80779749 MsG0280011189.01.T01:intron 50.0%
!! CTCTGAAACCGGAATCCACT+TGG - Chr2:80781628-80781647 None:intergenic 50.0%
!! TGGCATGTACCTTGGTTCTG+TGG + Chr2:80781677-80781696 MsG0280011189.01.T01:CDS 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG - Chr2:80779733-80779752 None:intergenic 50.0%
AGGGGGCCAAATCGCAACTT+TGG + Chr2:80779805-80779824 MsG0280011189.01.T01:intron 55.0%
CACCTGTCTCGGACATTCCT+TGG + Chr2:80782026-80782045 MsG0280011189.01.T01:CDS 55.0%
CATGCCAATACTGCCATGGC+AGG - Chr2:80782655-80782674 None:intergenic 55.0%
CCAAGCCTACCACAGAACCA+AGG - Chr2:80781689-80781708 None:intergenic 55.0%
CGCCTTTATGGGAATCGGTG+AGG + Chr2:80781132-80781151 MsG0280011189.01.T01:CDS 55.0%
CTGGGGCTATCTGCTTACTC+AGG + Chr2:80780863-80780882 MsG0280011189.01.T01:CDS 55.0%
CTTGGTGGGAAGGTAGTGCT+AGG + Chr2:80781025-80781044 MsG0280011189.01.T01:CDS 55.0%
TGCTGCCACCAAGGAGATAC+CGG - Chr2:80780370-80780389 None:intergenic 55.0%
TTAGGAAGCTGCTGCCACCA+AGG - Chr2:80780379-80780398 None:intergenic 55.0%
TTTCCTCTACCCCGAGATCC+GGG - Chr2:80781973-80781992 None:intergenic 55.0%
! CCGAGATCCGGGTCATCTTT+TGG - Chr2:80781962-80781981 None:intergenic 55.0%
! CTGATGGCCACCCAAGGTTT+TGG - Chr2:80781731-80781750 None:intergenic 55.0%
! GGCAGACAAACTTGGTGGGA+AGG + Chr2:80781015-80781034 MsG0280011189.01.T01:CDS 55.0%
!! CCTTGGTTCTGTGGTAGGCT+TGG + Chr2:80781686-80781705 MsG0280011189.01.T01:CDS 55.0%
!! CTGCCATGGCAGTATTGGCA+TGG + Chr2:80782653-80782672 MsG0280011189.01.T01:CDS 55.0%
!! TTGTGGCAGTTTTGGCCCCA+AGG - Chr2:80779748-80779767 None:intergenic 55.0%
ACGGTTCGCCGGTATCTCCT+TGG + Chr2:80780359-80780378 MsG0280011189.01.T01:intron 60.0%
CTGACGTGGCACCCTAAGTG+AGG - Chr2:80779704-80779723 None:intergenic 60.0%
GTTCGCCGGTATCTCCTTGG+TGG + Chr2:80780362-80780381 MsG0280011189.01.T01:intron 60.0%
!! GTAGCAGTTTTGGCCCCCCA+AGG + Chr2:80779646-80779665 MsG0280011189.01.T01:intron 60.0%
!! TGACTCGGTCTACGCTGACG+TGG - Chr2:80779718-80779737 None:intergenic 60.0%
GGCAGCAGCTTCCTAAGCGC+TGG + Chr2:80780383-80780402 MsG0280011189.01.T01:intron 65.0%
TGACCCGGATCTCGGGGTAG+AGG + Chr2:80781967-80781986 MsG0280011189.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 80778876 80782697 80778876 ID=MsG0280011189.01;Name=MsG0280011189.01
Chr2 mRNA 80778876 80782697 80778876 ID=MsG0280011189.01.T01;Parent=MsG0280011189.01;Name=MsG0280011189.01.T01;_AED=0.50;_eAED=0.50;_QI=208|0.57|0.62|1|0.71|0.75|8|0|357
Chr2 exon 80778876 80779138 80778876 ID=MsG0280011189.01.T01:exon:28521;Parent=MsG0280011189.01.T01
Chr2 exon 80780091 80780214 80780091 ID=MsG0280011189.01.T01:exon:28522;Parent=MsG0280011189.01.T01
Chr2 exon 80780273 80780369 80780273 ID=MsG0280011189.01.T01:exon:28523;Parent=MsG0280011189.01.T01
Chr2 exon 80780777 80780884 80780777 ID=MsG0280011189.01.T01:exon:28524;Parent=MsG0280011189.01.T01
Chr2 exon 80780998 80781153 80780998 ID=MsG0280011189.01.T01:exon:28525;Parent=MsG0280011189.01.T01
Chr2 exon 80781591 80781806 80781591 ID=MsG0280011189.01.T01:exon:28526;Parent=MsG0280011189.01.T01
Chr2 exon 80781947 80782156 80781947 ID=MsG0280011189.01.T01:exon:28527;Parent=MsG0280011189.01.T01
Chr2 exon 80782590 80782697 80782590 ID=MsG0280011189.01.T01:exon:28528;Parent=MsG0280011189.01.T01
Chr2 five_prime_UTR 80778876 80779083 80778876 ID=MsG0280011189.01.T01:five_prime_utr;Parent=MsG0280011189.01.T01
Chr2 CDS 80779084 80779138 80779084 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80780091 80780214 80780091 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80780273 80780369 80780273 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80780777 80780884 80780777 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80780998 80781153 80780998 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80781591 80781806 80781591 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80781947 80782156 80781947 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Chr2 CDS 80782590 80782697 80782590 ID=MsG0280011189.01.T01:cds;Parent=MsG0280011189.01.T01
Gene Sequence

>MsG0280011189.01.T01

ATGGCTATAAGTGGTTTAATTTCCAACAGAAGCTTCACTTCTTTCATTGCTTCAGGAAATGTATATCAGTTAAGAAAGGATCTATCACTTCAAAGAGGAAGCGTTTTTAGTGTTCAGTCTGGTGGCCAGATTGCGAGTAACCCTTTGCAAAAAGTAGAAGTCATATTGAACAAAGAGAATTCAGAAGAATATGACATTGATGAAACGAAGGTAGATCCTGTGGCATCTGATGAAGGAACAGGCGAAGCAATTCTATTGGAAGGAAACGGTTCGCCGGTAAATATGAGCATAGCGATACTTCCAATGTCACAAGAGTTTAACTGGAACAGTGCAACAGTTGGCTTAATTCAGTCATCTTTTTTCTGGGGCTATCTGCTTACTCAGATTCTTGGTGGTATATGGGCAGACAAACTTGGTGGGAAGGTAGTGCTAGGATTTGGAGTTGTATGGTGGTCAATGGCAACAATTTTAACCCCTATTGCTGCAAGAATTGGGCTCCCTTATTTGCTAATTATGCGCGCCTTTATGGGAATCGGTGAGGGTGTAGCCATGCCCGCCATGAATAATATATTGTCCAAGTGGATTCCGGTTTCAGAGAGAAGCAGATCACTTTCGCTAGTATATAGTGGCATGTACCTTGGTTCTGTGGTAGGCTTGGCATTCTCACCTTTTCTTATCCAAAACCTTGGGTGGCCATCAGTGTTTTACTCGTTTGGATCCCTTGGAAGTATCTGGTTTGCCTTTTGGTTGAGAAAAGCATATAGCTCACCAAAAGATGACCCGGATCTCGGGGTAGAGGAAAAAAAGCTCATCCTTGAAGGCGGCGTATCGAAAACACCTGTCTCGGACATTCCTTGGAAATTAATTCTATCAAAAGCACCAGTTTGGGCTCTTATAATCTCTCATTTCTGCCACAATTGGGGGACATTTATTCTATTAACATGGATGCCTACATACTACAATCAGATCATGCAATCAATCGGGTTCTGGGTCCCGCCTTTTTCTTACACAACTGAGCATGTCAAACACCTGCCATGGCAGTATTGGCATGGCATGCAGTCAGGTTTGAGCTAG

Protein sequence

>MsG0280011189.01.T01

MAISGLISNRSFTSFIASGNVYQLRKDLSLQRGSVFSVQSGGQIASNPLQKVEVILNKENSEEYDIDETKVDPVASDEGTGEAILLEGNGSPVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKVVLGFGVVWWSMATILTPIAARIGLPYLLIMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLSLVYSGMYLGSVVGLAFSPFLIQNLGWPSVFYSFGSLGSIWFAFWLRKAYSSPKDDPDLGVEEKKLILEGGVSKTPVSDIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQIMQSIGFWVPPFSYTTEHVKHLPWQYWHGMQSGLS*