AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009542.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009542.01.T01 MTR_2g066060 97.183 142 4 0 1 142 1 142 8.62e-97 288
MsG0280009542.01.T01 MTR_2g066060 97.183 142 4 0 1 142 1 142 3.66e-96 291
MsG0280009542.01.T01 MTR_2g066060 91.096 146 8 1 142 287 245 385 2.32e-89 273
MsG0280009542.01.T01 MTR_7g114070 29.655 145 93 3 142 284 192 329 1.57e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009542.01.T01 AT1G56180 77.397 146 28 1 142 287 242 382 3.29e-77 242
MsG0280009542.01.T01 AT1G56180 48.175 137 46 6 19 142 15 139 7.43e-28 112
MsG0280009542.01.T01 AT1G56180 48.175 137 46 6 19 142 15 139 3.62e-28 111
MsG0280009542.01.T01 AT1G56180 77.778 54 12 0 142 195 242 295 2.36e-24 101
MsG0280009542.01.T01 AT5G27290 30.000 150 86 4 142 284 193 330 2.37e-12 67.8

Find 100 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGCTGAGGCTCTTATTTA+TGG 0.164924 2:+54031568 MsG0280009542.01.T01:CDS
CCCATTTGCATTGCAACTAT+TGG 0.199577 2:-54029549 None:intergenic
TTTAGGCAGGGACTCAGTTT+TGG 0.224980 2:+54030027 MsG0280009542.01.T01:intron
TTTGGTAAATGCAGAAATAT+TGG 0.236327 2:+54025172 MsG0280009542.01.T01:CDS
TGAGAAAATGAGGGAAAATT+TGG 0.256595 2:-54024796 None:intergenic
TTTCTGCATTTACCAAAATT+AGG 0.271528 2:-54025166 None:intergenic
TAAAATTTCAGCTTACCTAA+TGG 0.314470 2:+54029497 MsG0280009542.01.T01:intron
AAAATTTCAGCTTACCTAAT+GGG 0.320619 2:+54029498 MsG0280009542.01.T01:intron
CGTAACTGCAGAACCGTTTA+CGG 0.345339 2:+54024982 MsG0280009542.01.T01:CDS
TCTAGAATCACCCCTCGAAT+TGG 0.364635 2:-54029525 None:intergenic
GTGATACTTGTAGATACAAT+AGG 0.372395 2:+54032760 MsG0280009542.01.T01:intron
TCCAATAGTTGCAATGCAAA+TGG 0.383334 2:+54029548 MsG0280009542.01.T01:CDS
TTTCAAGTAGTGATGCCTTT+TGG 0.389261 2:+54032676 MsG0280009542.01.T01:CDS
AATTTGGAGGTGAGAGGGAG+AGG 0.391572 2:-54024780 None:intergenic
TGTTCGGTCCGCAGAGGGAT+TGG 0.409605 2:+54025059 MsG0280009542.01.T01:CDS
AGCAGAGGTCTTTCCACAAC+TGG 0.414293 2:+54031666 MsG0280009542.01.T01:CDS
GAATGCTTATAAGTTTCTTA+AGG 0.416498 2:+54025129 MsG0280009542.01.T01:CDS
CTCGAATTGGGCATCCCATT+AGG 0.420824 2:-54029512 None:intergenic
GGAGAAACTCCGTCCGTAAA+CGG 0.424707 2:-54024995 None:intergenic
TTCTGCAGTTACGCGTTGTT+CGG 0.425988 2:-54024972 None:intergenic
CTTGCTGAAGGCCGACTAGA+TGG 0.432462 2:+54030071 MsG0280009542.01.T01:CDS
GTAGTCGCGCCATTCTTTGA+AGG 0.435589 2:-54024888 None:intergenic
GTTCGGTCCGCAGAGGGATT+GGG 0.438088 2:+54025060 MsG0280009542.01.T01:CDS
CTCCGGTAGCCGAGTTGACT+CGG 0.439069 2:+54025014 MsG0280009542.01.T01:CDS
CTAGAATCACCCCTCGAATT+GGG 0.443121 2:-54029524 None:intergenic
CTTGAGAAGCCCACATTTGG+TGG 0.443591 2:-54032855 None:intergenic
TCAAGATTTGTATATCAAAC+CGG 0.444807 2:+54032873 MsG0280009542.01.T01:CDS
TTATAAGTTTCTTAAGGATA+GGG 0.447210 2:+54025135 MsG0280009542.01.T01:CDS
CTTATAAGTTTCTTAAGGAT+AGG 0.452608 2:+54025134 MsG0280009542.01.T01:CDS
AATCTTGAGAAGCCCACATT+TGG 0.453430 2:-54032858 None:intergenic
TGAGGGGAGGTGAGAAAATG+AGG 0.469297 2:-54024806 None:intergenic
GGGAAAATTTGGAGGTGAGA+GGG 0.472258 2:-54024785 None:intergenic
CACTCACCGCCTTCAAAGAA+TGG 0.473473 2:+54024879 MsG0280009542.01.T01:CDS
TTACGCGTTGTTCGGTTTCG+AGG 0.476415 2:-54024964 None:intergenic
AATCTTATAATTTGCTCAAG+TGG 0.477761 2:+54031805 MsG0280009542.01.T01:CDS
GGAAAGTGCGGGAAAATTGA+GGG 0.478116 2:-54024823 None:intergenic
CCAATAGTTGCAATGCAAAT+GGG 0.492043 2:+54029549 MsG0280009542.01.T01:CDS
TTCCGTGAGTTGGAGATGTT+CGG 0.492133 2:+54025043 MsG0280009542.01.T01:CDS
ACACTAACAATACATATTGA+AGG 0.493096 2:-54032828 None:intergenic
GGGAAAGTGCGGGAAAATTG+AGG 0.503706 2:-54024824 None:intergenic
GTTTACGGACGGAGTTTCTC+CGG 0.505029 2:+54024997 MsG0280009542.01.T01:CDS
CTTATTTATGGTGAGGCAGA+GGG 0.507075 2:+54031580 MsG0280009542.01.T01:CDS
GACCGAGTCAACTCGGCTAC+CGG 0.510902 2:-54025016 None:intergenic
TACGCGTTGTTCGGTTTCGA+GGG 0.514368 2:-54024963 None:intergenic
AGGGAAAATTTGGAGGTGAG+AGG 0.521085 2:-54024786 None:intergenic
TAATGGGATGCCCAATTCGA+GGG 0.521844 2:+54029514 MsG0280009542.01.T01:CDS
TAGTGTTAAACCACCAAATG+TGG 0.522192 2:+54032845 MsG0280009542.01.T01:CDS
TAAACCAGAGCAACCAGTTG+TGG 0.523447 2:-54031679 None:intergenic
GCCTCCATTGTCTGTAGCAG+AGG 0.526930 2:+54031651 MsG0280009542.01.T01:CDS
CGGAGAGGTTTGCGTGTCAC+CGG 0.526945 2:-54024848 None:intergenic
TCGGCCTTCAGCAAGGTCGC+TGG 0.528447 2:-54030063 None:intergenic
CCGAGCTGCTGTTAAAGCAT+TGG 0.528568 2:+54031842 MsG0280009542.01.T01:CDS
TGATACTTGTAGATACAATA+GGG 0.532594 2:+54032761 MsG0280009542.01.T01:intron
TACCTTGTGGAGTTACCAAA+AGG 0.535688 2:-54032691 None:intergenic
TCTTATTTATGGTGAGGCAG+AGG 0.537919 2:+54031579 MsG0280009542.01.T01:CDS
TCAATGGTTTAGGTACTGTA+TGG 0.538238 2:+54031528 MsG0280009542.01.T01:intron
TATAAGTTTCTTAAGGATAG+GGG 0.539138 2:+54025136 MsG0280009542.01.T01:CDS
TCGGTCTCGATTCCGTGAGT+TGG 0.539156 2:+54025033 MsG0280009542.01.T01:CDS
CTTTGAAGGCGGTGAGTGGT+CGG 0.546232 2:-54024874 None:intergenic
AAATTAGTAATGCTTGTAGC+CGG 0.551342 2:-54032892 None:intergenic
CACTAACAATACATATTGAA+GGG 0.555002 2:-54032827 None:intergenic
GAAAATGAGGGAAAATTTGG+AGG 0.560611 2:-54024793 None:intergenic
CTAATGGGATGCCCAATTCG+AGG 0.563298 2:+54029513 MsG0280009542.01.T01:CDS
GGAGATGTTCGGTCCGCAGA+GGG 0.565156 2:+54025054 MsG0280009542.01.T01:CDS
GCAAATGGGTATCCAAGGAC+AGG 0.566483 2:+54029563 MsG0280009542.01.T01:CDS
AGGCGGTGAGTGGTCGGAGA+CGG 0.571801 2:-54024868 None:intergenic
GTGAGAGGGAGAGGAAGACA+TGG 0.573325 2:-54024771 None:intergenic
AAGACCTCTGCTACAGACAA+TGG 0.575943 2:-54031655 None:intergenic
CCAATGCTTTAACAGCAGCT+CGG 0.580868 2:-54031842 None:intergenic
CATTCTTTGAAGGCGGTGAG+TGG 0.582217 2:-54024878 None:intergenic
GCAATGCAAATGGGTATCCA+AGG 0.590300 2:+54029558 MsG0280009542.01.T01:CDS
AGAGGTTTGCGTGTCACCGG+AGG 0.596089 2:-54024845 None:intergenic
TGAGGCTCTTATTTATGGTG+AGG 0.600518 2:+54031573 MsG0280009542.01.T01:CDS
GAGGGGAGGTGAGAAAATGA+GGG 0.601856 2:-54024805 None:intergenic
GTGTCACCGGAGGGAAAGTG+CGG 0.603430 2:-54024835 None:intergenic
AGATGTCTAATCAAGCAAGA+TGG 0.606406 2:+54031772 MsG0280009542.01.T01:intron
TGTCACCGGAGGGAAAGTGC+GGG 0.614609 2:-54024834 None:intergenic
GTCTAATCAAGCAAGATGGT+CGG 0.616317 2:+54031776 MsG0280009542.01.T01:CDS
GAATCGAGACCGAGTCAACT+CGG 0.619180 2:-54025023 None:intergenic
GAGGTTTGCGTGTCACCGGA+GGG 0.619866 2:-54024844 None:intergenic
GTCGCGCCATTCTTTGAAGG+CGG 0.621068 2:-54024885 None:intergenic
GTTGCCAGCGACCTTGCTGA+AGG 0.623473 2:+54030059 MsG0280009542.01.T01:CDS
ATTTATGGTGAGGCAGAGGG+TGG 0.624370 2:+54031583 MsG0280009542.01.T01:CDS
AGTGTTAAACCACCAAATGT+GGG 0.626228 2:+54032846 MsG0280009542.01.T01:CDS
GACCGAACATCTCCAACTCA+CGG 0.626835 2:-54025045 None:intergenic
CATCTAGTCGGCCTTCAGCA+AGG 0.633811 2:-54030070 None:intergenic
GCTGTTAAAGCATTGGAAAG+TGG 0.642904 2:+54031849 MsG0280009542.01.T01:CDS
CAAAAGCTGAACCATCTAGT+CGG 0.651547 2:-54030082 None:intergenic
GTAAAACGCAAAGACCTCGC+CGG 0.654740 2:+54024920 MsG0280009542.01.T01:CDS
GTGAGTGGTCGGAGACGGAG+AGG 0.659853 2:-54024863 None:intergenic
TGGAGATGTTCGGTCCGCAG+AGG 0.666720 2:+54025053 MsG0280009542.01.T01:CDS
ACCTCTGCTACAGACAATGG+AGG 0.669231 2:-54031652 None:intergenic
AATGGGATGCCCAATTCGAG+GGG 0.670159 2:+54029515 MsG0280009542.01.T01:CDS
AGTGCGGGAAAATTGAGGGG+AGG 0.682404 2:-54024819 None:intergenic
GAAAGTGCGGGAAAATTGAG+GGG 0.691833 2:-54024822 None:intergenic
ACTGCAGAACCGTTTACGGA+CGG 0.692985 2:+54024986 MsG0280009542.01.T01:CDS
AGAACTTCCCAATCCCTCTG+CGG 0.699994 2:-54025067 None:intergenic
GTTAAAGCATTGGAAAGTGG+TGG 0.709004 2:+54031852 MsG0280009542.01.T01:CDS
GGAAACTGAGAGCTCCGGCG+AGG 0.709664 2:-54024934 None:intergenic
AAGTGGTGGCAGTCTGAGTG+CGG 0.737711 2:+54031866 MsG0280009542.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTCTAATTTTATTTTATTTT+TGG - Chr2:54026050-54026069 None:intergenic 10.0%
!! AAAGTGTAATATATAAAGAA+CGG + Chr2:54026763-54026782 MsG0280009542.01.T01:intron 15.0%
!! AATACTTAGAATCATAAATT+AGG - Chr2:54028014-54028033 None:intergenic 15.0%
!! CTATTAGTAATAGTATAAAT+AGG - Chr2:54031037-54031056 None:intergenic 15.0%
!! GTTAGTTAATATTAACAAAA+TGG - Chr2:54026476-54026495 None:intergenic 15.0%
!! TTCATGATATGATAATTTAT+TGG + Chr2:54029605-54029624 MsG0280009542.01.T01:intron 15.0%
!!! ATAATCTTACCAATTTTTTA+AGG - Chr2:54027325-54027344 None:intergenic 15.0%
!!! TTTTTCAATTAAGATTACAT+GGG + Chr2:54025525-54025544 MsG0280009542.01.T01:intron 15.0%
!!! TTTTTTCAATTAAGATTACA+TGG + Chr2:54025524-54025543 MsG0280009542.01.T01:intron 15.0%
!! AAAGTCAATCAATTAATAGA+AGG + Chr2:54028587-54028606 MsG0280009542.01.T01:intron 20.0%
!! AAGCATATATGTAACAAATT+TGG - Chr2:54027718-54027737 None:intergenic 20.0%
!! CTGTTACAAGTTATAAAAAA+TGG + Chr2:54032327-54032346 MsG0280009542.01.T01:intron 20.0%
!! GTAAGTCAATCAATTAATAT+TGG + Chr2:54028557-54028576 MsG0280009542.01.T01:intron 20.0%
!! TGAAATGAATCTATAATTGT+TGG - Chr2:54029913-54029932 None:intergenic 20.0%
!! TTATAAGTTTCTTAAGGATA+GGG + Chr2:54025135-54025154 MsG0280009542.01.T01:CDS 20.0%
!! TTCTACATGCTATTATAAAT+AGG - Chr2:54027957-54027976 None:intergenic 20.0%
!! TTTGAATTATGATTGTAGTT+TGG + Chr2:54030398-54030417 MsG0280009542.01.T01:intron 20.0%
!! TTTGTTACATATATGCTTAT+AGG + Chr2:54027720-54027739 MsG0280009542.01.T01:intron 20.0%
!!! AAAATCATGAAGTTTGTTAA+GGG + Chr2:54030717-54030736 MsG0280009542.01.T01:intron 20.0%
!!! ATTTGTTTTCCTATCTAATT+AGG - Chr2:54030483-54030502 None:intergenic 20.0%
!!! ATTTTTAGCAATTTATAGCT+AGG - Chr2:54029031-54029050 None:intergenic 20.0%
!!! CATTTTTACAATATCATTGT+TGG - Chr2:54026697-54026716 None:intergenic 20.0%
!!! GATATGTTTTATGTAATCAA+TGG + Chr2:54031512-54031531 MsG0280009542.01.T01:intron 20.0%
!!! GGTCAATTTGTTTTATATTT+TGG + Chr2:54026518-54026537 MsG0280009542.01.T01:intron 20.0%
!!! TAAAATCATGAAGTTTGTTA+AGG + Chr2:54030716-54030735 MsG0280009542.01.T01:intron 20.0%
!!! TAGGTAAAATGTTTTTACAA+AGG - Chr2:54032430-54032449 None:intergenic 20.0%
!!! TCAAATTCTATTTTATGTCA+AGG - Chr2:54028715-54028734 None:intergenic 20.0%
!!! TGTTTGTTTTCCAAATTATA+AGG - Chr2:54030295-54030314 None:intergenic 20.0%
!!! TTTTATGTAATCAATGGTTT+AGG + Chr2:54031518-54031537 MsG0280009542.01.T01:intron 20.0%
!!! TTTTTAGCAATTTATAGCTA+GGG - Chr2:54029030-54029049 None:intergenic 20.0%
!!! TTTTTGCTTATAATAATGAC+CGG + Chr2:54025742-54025761 MsG0280009542.01.T01:intron 20.0%
! AAAATTTCAGCTTACCTAAT+GGG + Chr2:54029498-54029517 MsG0280009542.01.T01:intron 25.0%
! AACAAAAAACAAGATACTTC+AGG - Chr2:54031477-54031496 None:intergenic 25.0%
! AATAAAAAAATACCTGTCCT+TGG - Chr2:54029578-54029597 None:intergenic 25.0%
! AATCTATATGCTAATATGTG+TGG - Chr2:54027487-54027506 None:intergenic 25.0%
! ACAACAAGTAGAATTGAAAT+AGG - Chr2:54031329-54031348 None:intergenic 25.0%
! ACACTAACAATACATATTGA+AGG - Chr2:54032831-54032850 None:intergenic 25.0%
! ACATTACTTCAAAAGATTGA+GGG + Chr2:54026497-54026516 MsG0280009542.01.T01:intron 25.0%
! ACCTTGTACTAAAATTCAAA+TGG - Chr2:54027235-54027254 None:intergenic 25.0%
! ACGAAAATGATGTCAAATAA+TGG - Chr2:54029989-54030008 None:intergenic 25.0%
! ACTACAAATCCTAATTAGAT+AGG + Chr2:54030471-54030490 MsG0280009542.01.T01:intron 25.0%
! AGAATAACAATAATAGCTAG+AGG - Chr2:54027407-54027426 None:intergenic 25.0%
! AGCAATGTCATCAATAATAA+TGG + Chr2:54029842-54029861 MsG0280009542.01.T01:intron 25.0%
! AGGTAAAAAATTTAGCATCA+CGG - Chr2:54031733-54031752 None:intergenic 25.0%
! ATGTATTAGCAAAAGCTATT+AGG + Chr2:54032403-54032422 MsG0280009542.01.T01:intron 25.0%
! ATTACATATCTAACCATGTT+GGG - Chr2:54032236-54032255 None:intergenic 25.0%
! ATTATCAATCATGCTTTACT+TGG - Chr2:54028150-54028169 None:intergenic 25.0%
! ATTTCTTATGATGTTTCTCT+TGG + Chr2:54032611-54032630 MsG0280009542.01.T01:intron 25.0%
! CACTAACAATACATATTGAA+GGG - Chr2:54032830-54032849 None:intergenic 25.0%
! CATGTAATGAACATTTAACT+AGG + Chr2:54028684-54028703 MsG0280009542.01.T01:intron 25.0%
! CATTCATTAAATGATGTATG+TGG - Chr2:54025707-54025726 None:intergenic 25.0%
! CCTTGTACTAAAATTCAAAT+GGG - Chr2:54027234-54027253 None:intergenic 25.0%
! CTTATAAGTTTCTTAAGGAT+AGG + Chr2:54025134-54025153 MsG0280009542.01.T01:CDS 25.0%
! CTTGTACTAAAATTCAAATG+GGG - Chr2:54027233-54027252 None:intergenic 25.0%
! GAATGCTTATAAGTTTCTTA+AGG + Chr2:54025129-54025148 MsG0280009542.01.T01:CDS 25.0%
! GATAGGAAAACAAATTGATA+TGG + Chr2:54030488-54030507 MsG0280009542.01.T01:intron 25.0%
! GTACCATATATTGAAATCAT+GGG + Chr2:54030929-54030948 MsG0280009542.01.T01:intron 25.0%
! TAAAATTTCAGCTTACCTAA+TGG + Chr2:54029497-54029516 MsG0280009542.01.T01:intron 25.0%
! TAATAGAAGGCAAATTAAAC+AGG + Chr2:54028600-54028619 MsG0280009542.01.T01:intron 25.0%
! TACATTACTTCAAAAGATTG+AGG + Chr2:54026496-54026515 MsG0280009542.01.T01:intron 25.0%
! TACCATATATTGAAATCATG+GGG + Chr2:54030930-54030949 MsG0280009542.01.T01:intron 25.0%
! TACTAAGTATTATCAGTTAG+TGG + Chr2:54027617-54027636 MsG0280009542.01.T01:intron 25.0%
! TATAAGTTTCTTAAGGATAG+GGG + Chr2:54025136-54025155 MsG0280009542.01.T01:CDS 25.0%
! TATATCAGATGAACTTACAA+CGG + Chr2:54025380-54025399 MsG0280009542.01.T01:intron 25.0%
! TATTACATATCTAACCATGT+TGG - Chr2:54032237-54032256 None:intergenic 25.0%
! TATTCCTTGTGAAATAAGAA+AGG - Chr2:54029236-54029255 None:intergenic 25.0%
! TCAAATAGATGAAATAGACT+AGG - Chr2:54029650-54029669 None:intergenic 25.0%
! TCAAGATAAAGTGGATAAAT+TGG + Chr2:54028255-54028274 MsG0280009542.01.T01:intron 25.0%
! TCAAGATTTGTATATCAAAC+CGG + Chr2:54032873-54032892 MsG0280009542.01.T01:CDS 25.0%
! TCTCATGTAAAATTGGATTT+AGG + Chr2:54027868-54027887 MsG0280009542.01.T01:intron 25.0%
! TCTTGAAAACTAATAGATAC+TGG - Chr2:54028283-54028302 None:intergenic 25.0%
! TGATACTTGTAGATACAATA+GGG + Chr2:54032761-54032780 MsG0280009542.01.T01:intron 25.0%
! TTACATGTGAAAGTGAATAA+AGG - Chr2:54028671-54028690 None:intergenic 25.0%
! TTATCATCATACCTAAATTC+TGG + Chr2:54028487-54028506 MsG0280009542.01.T01:intron 25.0%
! TTGTACTAAAATTCAAATGG+GGG - Chr2:54027232-54027251 None:intergenic 25.0%
! TTTCTGCATTTACCAAAATT+AGG - Chr2:54025169-54025188 None:intergenic 25.0%
! TTTGGTAAATGCAGAAATAT+TGG + Chr2:54025172-54025191 MsG0280009542.01.T01:CDS 25.0%
!! AAGCTGAAATTTTATTAGGA+GGG - Chr2:54029491-54029510 None:intergenic 25.0%
!! AAGTAGAAAAACCAGTTTTT+GGG - Chr2:54029110-54029129 None:intergenic 25.0%
!! ACTAAAGATGTTTTCCTATA+CGG - Chr2:54028432-54028451 None:intergenic 25.0%
!! AGGTAAGCTGAAATTTTATT+AGG - Chr2:54029495-54029514 None:intergenic 25.0%
!! ATAAGTTTTCTTAAGCACAA+TGG + Chr2:54026616-54026635 MsG0280009542.01.T01:intron 25.0%
!! GAATAATTTTATGTTTCAGC+AGG + Chr2:54032180-54032199 MsG0280009542.01.T01:intron 25.0%
!! GACATGTTTTACAATATGAA+AGG + Chr2:54032783-54032802 MsG0280009542.01.T01:CDS 25.0%
!! GTTCTTTTTGCCTTATAATT+TGG + Chr2:54030282-54030301 MsG0280009542.01.T01:intron 25.0%
!! TAAATCCAATTTTACATGAG+AGG - Chr2:54027869-54027888 None:intergenic 25.0%
!! TAAGCTGAAATTTTATTAGG+AGG - Chr2:54029492-54029511 None:intergenic 25.0%
!! TAAGTAGAAAAACCAGTTTT+TGG - Chr2:54029111-54029130 None:intergenic 25.0%
!! TAAGTTTTCTTAAGCACAAT+GGG + Chr2:54026617-54026636 MsG0280009542.01.T01:intron 25.0%
!! TAGCTTTTGCTAATACATTA+TGG - Chr2:54032401-54032420 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - Chr2:54025633-54025652 None:intergenic 25.0%
!!! AAATCTTTGTTTTTTAGGCA+GGG + Chr2:54030015-54030034 MsG0280009542.01.T01:intron 25.0%
!!! AAGTTACTCACTTTTCTTTT+CGG + Chr2:54032002-54032021 MsG0280009542.01.T01:intron 25.0%
!!! AATCTTATAATTTGCTCAAG+TGG + Chr2:54031805-54031824 MsG0280009542.01.T01:CDS 25.0%
!!! ACATTCGAAAATTTTAGAGA+CGG - Chr2:54026449-54026468 None:intergenic 25.0%
!!! GCAGTAAATCTTTGTTTTTT+AGG + Chr2:54030010-54030029 MsG0280009542.01.T01:intron 25.0%
!!! TAAATCTTTGTTTTTTAGGC+AGG + Chr2:54030014-54030033 MsG0280009542.01.T01:intron 25.0%
!!! TCAACAAGTTGTTTTTTACT+TGG + Chr2:54026582-54026601 MsG0280009542.01.T01:intron 25.0%
!!! TTTGAACAAACTGCTATTTT+TGG + Chr2:54027664-54027683 MsG0280009542.01.T01:intron 25.0%
AAAACAAATTGATATGGCCT+GGG + Chr2:54030494-54030513 MsG0280009542.01.T01:intron 30.0%
AACAGAAACAGTTTATTGTC+TGG + Chr2:54031409-54031428 MsG0280009542.01.T01:intron 30.0%
AACCATGTTGGGTAAAATTT+GGG - Chr2:54032225-54032244 None:intergenic 30.0%
AACCTAGAGATTAATAGCTT+AGG - Chr2:54031230-54031249 None:intergenic 30.0%
AACTTTAATAGGGCTAAAAG+AGG - Chr2:54030350-54030369 None:intergenic 30.0%
AAGATACTTCAGGTGAAAAA+AGG - Chr2:54031467-54031486 None:intergenic 30.0%
AAGCTAATTCAAGTAGCTTA+TGG - Chr2:54025590-54025609 None:intergenic 30.0%
AAGTGTAACATGACTAAAAC+AGG - Chr2:54029055-54029074 None:intergenic 30.0%
AATAGACACTAGTAATCTAG+GGG + Chr2:54025280-54025299 MsG0280009542.01.T01:intron 30.0%
ACTCCAAATTCGAATCTAAT+AGG + Chr2:54031060-54031079 MsG0280009542.01.T01:intron 30.0%
AGAAATAGAGAAGGACAAAA+TGG + Chr2:54030590-54030609 MsG0280009542.01.T01:intron 30.0%
AGAGCTGTTCCTTAAAAAAT+TGG + Chr2:54027313-54027332 MsG0280009542.01.T01:intron 30.0%
AGATACTTCAGGTGAAAAAA+GGG - Chr2:54031466-54031485 None:intergenic 30.0%
AGTGTAACATGACTAAAACA+GGG - Chr2:54029054-54029073 None:intergenic 30.0%
ATGTGAAAGTGAATAAAGGA+AGG - Chr2:54028667-54028686 None:intergenic 30.0%
CAAAATGCATCAAAATTGTC+CGG - Chr2:54029673-54029692 None:intergenic 30.0%
CATCTTCTATTGAGATTGTT+AGG - Chr2:54031188-54031207 None:intergenic 30.0%
CATGTAAAATTGGATTTAGG+CGG + Chr2:54027871-54027890 MsG0280009542.01.T01:intron 30.0%
CTAGTAATCGTGTATCAAAA+GGG + Chr2:54028313-54028332 MsG0280009542.01.T01:intron 30.0%
CTATTATAAATAGGTGAGTG+TGG - Chr2:54027948-54027967 None:intergenic 30.0%
CTCCAAATTCGAATCTAATA+GGG + Chr2:54031061-54031080 MsG0280009542.01.T01:intron 30.0%
GAAACCCTGTAACTTTAATA+GGG - Chr2:54030360-54030379 None:intergenic 30.0%
GAAATAGAGAAGGACAAAAT+GGG + Chr2:54030591-54030610 MsG0280009542.01.T01:intron 30.0%
GAATAGACACTAGTAATCTA+GGG + Chr2:54025279-54025298 MsG0280009542.01.T01:intron 30.0%
GCAGTGTTTAGTAAAATTAG+TGG + Chr2:54025438-54025457 MsG0280009542.01.T01:intron 30.0%
GGTAAGTGATAACAAAAGAT+TGG - Chr2:54027141-54027160 None:intergenic 30.0%
GGTACCATATATTGAAATCA+TGG + Chr2:54030928-54030947 MsG0280009542.01.T01:intron 30.0%
GTATCAAAAGGGAGAAATTA+TGG + Chr2:54028324-54028343 MsG0280009542.01.T01:intron 30.0%
GTCTATTTCATCTATTTGAC+CGG + Chr2:54029651-54029670 MsG0280009542.01.T01:intron 30.0%
GTGATACTTGTAGATACAAT+AGG + Chr2:54032760-54032779 MsG0280009542.01.T01:intron 30.0%
GTTACATATATGCTTATAGG+AGG + Chr2:54027723-54027742 MsG0280009542.01.T01:intron 30.0%
TAACCATGTTGGGTAAAATT+TGG - Chr2:54032226-54032245 None:intergenic 30.0%
TACCCCATGATTTCAATATA+TGG - Chr2:54030935-54030954 None:intergenic 30.0%
TACTCAATGTTGTCAAATAG+AGG + Chr2:54027512-54027531 MsG0280009542.01.T01:intron 30.0%
TAGCTCAAATATCAAGTTAC+TGG + Chr2:54029329-54029348 MsG0280009542.01.T01:intron 30.0%
TATTGAGATTGTTAGGAGAA+AGG - Chr2:54031181-54031200 None:intergenic 30.0%
TCAACCATATGTTTGTTCAA+CGG - Chr2:54027051-54027070 None:intergenic 30.0%
TCGTCTAATCATGTATTACA+AGG - Chr2:54030213-54030232 None:intergenic 30.0%
TCTATTATAAGAATGCTGAG+TGG + Chr2:54030675-54030694 MsG0280009542.01.T01:intron 30.0%
TGAAACCCTGTAACTTTAAT+AGG - Chr2:54030361-54030380 None:intergenic 30.0%
TGAATAGACACTAGTAATCT+AGG + Chr2:54025278-54025297 MsG0280009542.01.T01:intron 30.0%
TGAGAAAATGAGGGAAAATT+TGG - Chr2:54024799-54024818 None:intergenic 30.0%
TGCTAATACATTATGGAACA+TGG - Chr2:54032394-54032413 None:intergenic 30.0%
TGTGTTAAGAGAAATAGAGA+AGG + Chr2:54030581-54030600 MsG0280009542.01.T01:intron 30.0%
TGTTTATTGCAAGAACGTTA+AGG - Chr2:54031753-54031772 None:intergenic 30.0%
TTAGCCCTATTAAAGTTACA+GGG + Chr2:54030353-54030372 MsG0280009542.01.T01:intron 30.0%
TTAGTCCTCTCATGTAAAAT+TGG + Chr2:54027861-54027880 MsG0280009542.01.T01:intron 30.0%
TTCCCTATTAGATTCGAATT+TGG - Chr2:54031066-54031085 None:intergenic 30.0%
TTCCTAAGCTATTAATCTCT+AGG + Chr2:54031225-54031244 MsG0280009542.01.T01:intron 30.0%
TTTAGCCCTATTAAAGTTAC+AGG + Chr2:54030352-54030371 MsG0280009542.01.T01:intron 30.0%
TTTGCAGATTCTATATTCCT+GGG + Chr2:54029295-54029314 MsG0280009542.01.T01:intron 30.0%
! AAATTGCCTTAAGTTGCATA+CGG + Chr2:54031956-54031975 MsG0280009542.01.T01:intron 30.0%
! ATCAGTTGCCAAATTTTTCA+TGG - Chr2:54026381-54026400 None:intergenic 30.0%
! TACCATGTTTTGTAATGCTT+TGG - Chr2:54030872-54030891 None:intergenic 30.0%
! TACTTTTCACACAACAATAG+TGG + Chr2:54026166-54026185 MsG0280009542.01.T01:intron 30.0%
! TAGTCTTGGTTATGTTTGTT+TGG + Chr2:54027358-54027377 MsG0280009542.01.T01:intron 30.0%
! TCATTTGATTGACTCTGTTA+TGG - Chr2:54032162-54032181 None:intergenic 30.0%
! TGAAGAATCTAGAACTATCT+CGG - Chr2:54031290-54031309 None:intergenic 30.0%
! TGAATCTATAATTGTTGGCT+TGG - Chr2:54029908-54029927 None:intergenic 30.0%
! TGCCAAATTTTTCATGGATT+GGG - Chr2:54026375-54026394 None:intergenic 30.0%
! TTGCCAAATTTTTCATGGAT+TGG - Chr2:54026376-54026395 None:intergenic 30.0%
! TTGCTGTGTTCATTTTATCT+GGG + Chr2:54032040-54032059 MsG0280009542.01.T01:intron 30.0%
! TTGTTTCTTAAGAACTTCAG+AGG + Chr2:54029414-54029433 MsG0280009542.01.T01:intron 30.0%
! TTTCCCTTTGTGTATAGTTT+TGG + Chr2:54028919-54028938 MsG0280009542.01.T01:intron 30.0%
! TTTTGAACTAACAAAGCTAG+TGG + Chr2:54027783-54027802 MsG0280009542.01.T01:intron 30.0%
!! ATAAAGAACGGTGTTGTTAA+TGG + Chr2:54026775-54026794 MsG0280009542.01.T01:intron 30.0%
!! CCCATTTGAATTTTAGTACA+AGG + Chr2:54027231-54027250 MsG0280009542.01.T01:intron 30.0%
!! GTTGATGTTTGTTGTTCTTA+GGG + Chr2:54027066-54027085 MsG0280009542.01.T01:intron 30.0%
!! TAAACAATGAGATTGGTCTT+CGG + Chr2:54025992-54026011 MsG0280009542.01.T01:intron 30.0%
!! TTTGCTGTGTTCATTTTATC+TGG + Chr2:54032039-54032058 MsG0280009542.01.T01:intron 30.0%
AAAACATGGTAGCATAGTGA+TGG + Chr2:54030881-54030900 MsG0280009542.01.T01:intron 35.0%
AAACATGGTAGCATAGTGAT+GGG + Chr2:54030882-54030901 MsG0280009542.01.T01:intron 35.0%
AACTGTACGAATGAAGTCTA+AGG - Chr2:54030265-54030284 None:intergenic 35.0%
AAGTAGCTAGGCATATAATG+GGG + Chr2:54030552-54030571 MsG0280009542.01.T01:intron 35.0%
AATGATAGCTGAGTTTAGAG+TGG + Chr2:54032282-54032301 MsG0280009542.01.T01:intron 35.0%
AATGTCTTGTAGTACGTTGA+TGG - Chr2:54031148-54031167 None:intergenic 35.0%
AATTATGGCCTTCAAATACG+AGG + Chr2:54028339-54028358 MsG0280009542.01.T01:intron 35.0%
ACAAAATGGGAATATCCACA+TGG + Chr2:54030604-54030623 MsG0280009542.01.T01:intron 35.0%
ACACCACAACAAATCATGTA+TGG - Chr2:54028862-54028881 None:intergenic 35.0%
ACATGAGTCTCAAGATAAAG+TGG + Chr2:54028246-54028265 MsG0280009542.01.T01:intron 35.0%
ACCAGGAAGATTTGAATTTG+AGG - Chr2:54025905-54025924 None:intergenic 35.0%
ACTTGATATTTGAGCTAGAC+AGG - Chr2:54029326-54029345 None:intergenic 35.0%
AGAAACAGTTTATTGTCTGG+AGG + Chr2:54031412-54031431 MsG0280009542.01.T01:intron 35.0%
AGAAGTAGCTAGGCATATAA+TGG + Chr2:54030550-54030569 MsG0280009542.01.T01:intron 35.0%
AGAATAGTATCATGCAGAGA+AGG - Chr2:54029744-54029763 None:intergenic 35.0%
AGATGTCTAATCAAGCAAGA+TGG + Chr2:54031772-54031791 MsG0280009542.01.T01:intron 35.0%
AGCAACACAATGGTCAAAAA+AGG + Chr2:54030820-54030839 MsG0280009542.01.T01:intron 35.0%
AGTGTTAAACCACCAAATGT+GGG + Chr2:54032846-54032865 MsG0280009542.01.T01:CDS 35.0%
ATTCTACTAGTAACCATGAC+TGG + Chr2:54032467-54032486 MsG0280009542.01.T01:intron 35.0%
ATTCTATACTGCCCAAAAAC+TGG + Chr2:54029096-54029115 MsG0280009542.01.T01:intron 35.0%
ATTGAATGCTGCATCAGTTA+GGG + Chr2:54030179-54030198 MsG0280009542.01.T01:intron 35.0%
CAAAATGACTTCATTTCCAC+TGG - Chr2:54032260-54032279 None:intergenic 35.0%
CAAACCGTTGAACAAACATA+TGG + Chr2:54027044-54027063 MsG0280009542.01.T01:intron 35.0%
CACACTATGTGTTTGTCTAT+CGG - Chr2:54026253-54026272 None:intergenic 35.0%
CACCACAACAAATCATGTAT+GGG - Chr2:54028861-54028880 None:intergenic 35.0%
CAGCTAGTAAACAATGAGAT+TGG + Chr2:54025985-54026004 MsG0280009542.01.T01:intron 35.0%
CAGGAATATAGAATCTGCAA+AGG - Chr2:54029296-54029315 None:intergenic 35.0%
CATACTTTGAATACCAAAGC+AGG - Chr2:54026278-54026297 None:intergenic 35.0%
CATATGTTTGTTCAACGGTT+TGG - Chr2:54027046-54027065 None:intergenic 35.0%
CCAACATATCAGCCAAAATT+GGG + Chr2:54026883-54026902 MsG0280009542.01.T01:intron 35.0%
CCAATAGTTGCAATGCAAAT+GGG + Chr2:54029549-54029568 MsG0280009542.01.T01:CDS 35.0%
CCTAGTAATCGTGTATCAAA+AGG + Chr2:54028312-54028331 MsG0280009542.01.T01:intron 35.0%
CCTCCAAAACTATACACAAA+GGG - Chr2:54028925-54028944 None:intergenic 35.0%
CTTTGCAGATTCTATATTCC+TGG + Chr2:54029294-54029313 MsG0280009542.01.T01:intron 35.0%
GAAAACAAATTGATATGGCC+TGG + Chr2:54030493-54030512 MsG0280009542.01.T01:intron 35.0%
GAAAATGAGGGAAAATTTGG+AGG - Chr2:54024796-54024815 None:intergenic 35.0%
GAAGTAGCTAGGCATATAAT+GGG + Chr2:54030551-54030570 MsG0280009542.01.T01:intron 35.0%
GAATCAAGCACTAGTTAAAG+AGG + Chr2:54030146-54030165 MsG0280009542.01.T01:intron 35.0%
GGGTTATCAAAGATTTGCAA+TGG + Chr2:54032066-54032085 MsG0280009542.01.T01:intron 35.0%
GGTATATACAGTGTAGTCAA+TGG - Chr2:54027697-54027716 None:intergenic 35.0%
GGTTAGATATGTAATACCAG+TGG + Chr2:54032241-54032260 MsG0280009542.01.T01:intron 35.0%
TAAAAAAATGCTACACCCTC+CGG + Chr2:54025611-54025630 MsG0280009542.01.T01:intron 35.0%
TAGTGTTAAACCACCAAATG+TGG + Chr2:54032845-54032864 MsG0280009542.01.T01:CDS 35.0%
TCAAATTCAAATCTTCCTGG+TGG + Chr2:54025904-54025923 MsG0280009542.01.T01:intron 35.0%
TCCAACATATCAGCCAAAAT+TGG + Chr2:54026882-54026901 MsG0280009542.01.T01:intron 35.0%
TCCAATAGTTGCAATGCAAA+TGG + Chr2:54029548-54029567 MsG0280009542.01.T01:CDS 35.0%
TCCCCAATCCATGAAAAATT+TGG + Chr2:54026370-54026389 MsG0280009542.01.T01:intron 35.0%
TGAAAGTGAGAACATAGTCT+TGG + Chr2:54027344-54027363 MsG0280009542.01.T01:intron 35.0%
TGCTTATAATAATGACCGGA+GGG + Chr2:54025746-54025765 MsG0280009542.01.T01:intron 35.0%
TTATCAAATAGTGGCCATAG+TGG - Chr2:54026228-54026247 None:intergenic 35.0%
TTCCTATACAGCCAGAATTT+AGG - Chr2:54028501-54028520 None:intergenic 35.0%
TTGCTTATAATAATGACCGG+AGG + Chr2:54025745-54025764 MsG0280009542.01.T01:intron 35.0%
TTGTTCTTAGGGATTACAGT+CGG + Chr2:54027077-54027096 MsG0280009542.01.T01:intron 35.0%
TTTAGTCACTGGACAAAAGA+AGG - Chr2:54029144-54029163 None:intergenic 35.0%
TTTCTGTTTAACATCGCCAT+TGG - Chr2:54031397-54031416 None:intergenic 35.0%
! AAGATTTGAATTTGAGGCCT+AGG - Chr2:54025899-54025918 None:intergenic 35.0%
! AATATCATTGTTGGTGCTTG+TGG - Chr2:54026688-54026707 None:intergenic 35.0%
! AATTGCCTTAAGTTGCATAC+GGG + Chr2:54031957-54031976 MsG0280009542.01.T01:intron 35.0%
! AGATTTGAATTTGAGGCCTA+GGG - Chr2:54025898-54025917 None:intergenic 35.0%
! ATCACTTACCACTTAGCTTT+AGG + Chr2:54027151-54027170 MsG0280009542.01.T01:intron 35.0%
! ATCCCAAATTTTACCCAACA+TGG + Chr2:54032220-54032239 MsG0280009542.01.T01:intron 35.0%
! CATGGGGTATTTGATAAAGA+GGG + Chr2:54030946-54030965 MsG0280009542.01.T01:intron 35.0%
! CCTTTTGATACACGATTACT+AGG - Chr2:54028315-54028334 None:intergenic 35.0%
! CTGTTTGAAACAGAATCATG+AGG + Chr2:54032519-54032538 MsG0280009542.01.T01:intron 35.0%
! GACACTAGTGTTTTCTATCA+CGG + Chr2:54026069-54026088 MsG0280009542.01.T01:intron 35.0%
! GATTTGCAATGGATTTGATG+TGG + Chr2:54032077-54032096 MsG0280009542.01.T01:intron 35.0%
! GTCCAAAGCATTACAAAACA+TGG + Chr2:54030867-54030886 MsG0280009542.01.T01:intron 35.0%
! GTGTCCTTTCTTATTTCACA+AGG + Chr2:54029229-54029248 MsG0280009542.01.T01:intron 35.0%
! GTGTTTGGCAAGACATATTT+TGG - Chr2:54025874-54025893 None:intergenic 35.0%
! GTTTTCACCAAGTCTTTTGA+GGG - Chr2:54027752-54027771 None:intergenic 35.0%
! TAAACTTGCTCCAAAGAAGT+GGG + Chr2:54029160-54029179 MsG0280009542.01.T01:intron 35.0%
! TACCTAAATTCTGGCTGTAT+AGG + Chr2:54028496-54028515 MsG0280009542.01.T01:intron 35.0%
! TCAATGGTTTAGGTACTGTA+TGG + Chr2:54031528-54031547 MsG0280009542.01.T01:intron 35.0%
! TCATGGGGTATTTGATAAAG+AGG + Chr2:54030945-54030964 MsG0280009542.01.T01:intron 35.0%
! TGGTGCTAATGAAGAAAACT+GGG - Chr2:54027021-54027040 None:intergenic 35.0%
! TGTTTTCACCAAGTCTTTTG+AGG - Chr2:54027753-54027772 None:intergenic 35.0%
! TTTGAAACAGAATCATGAGG+AGG + Chr2:54032522-54032541 MsG0280009542.01.T01:intron 35.0%
!! CTATCGGTGTTATCAAATAG+TGG - Chr2:54026237-54026256 None:intergenic 35.0%
!! GCCAAATTTTTCATGGATTG+GGG - Chr2:54026374-54026393 None:intergenic 35.0%
!! GGTTGATGTTTGTTGTTCTT+AGG + Chr2:54027065-54027084 MsG0280009542.01.T01:intron 35.0%
!! TACTGTATGGTACTTTTTGC+TGG + Chr2:54031541-54031560 MsG0280009542.01.T01:CDS 35.0%
!! TGGTTTGTTAAACTTCAGCT+GGG - Chr2:54027571-54027590 None:intergenic 35.0%
!! TGTTCATTTTATCTGGGACA+GGG + Chr2:54032046-54032065 MsG0280009542.01.T01:intron 35.0%
!! TTCCCATACATGATTTGTTG+TGG + Chr2:54028856-54028875 MsG0280009542.01.T01:intron 35.0%
!! TTTCAAGTAGTGATGCCTTT+TGG + Chr2:54032676-54032695 MsG0280009542.01.T01:CDS 35.0%
!!! AACTCTGTTTTGACTCAATC+TGG + Chr2:54028193-54028212 MsG0280009542.01.T01:intron 35.0%
!!! ACTCTGTTTTGACTCAATCT+GGG + Chr2:54028194-54028213 MsG0280009542.01.T01:intron 35.0%
!!! AGGGGTTTTTTGCCTAATTT+TGG + Chr2:54025154-54025173 MsG0280009542.01.T01:CDS 35.0%
!!! CACTGCTTTGTTTGCTTTTT+TGG + Chr2:54029202-54029221 MsG0280009542.01.T01:intron 35.0%
!!! CCTTTGTGTATAGTTTTGGA+GGG + Chr2:54028923-54028942 MsG0280009542.01.T01:intron 35.0%
!!! GTAGTACGTTGATGGTATTT+TGG - Chr2:54031140-54031159 None:intergenic 35.0%
!!! TGCTTTGTTTGCTTTTTTGG+TGG + Chr2:54029205-54029224 MsG0280009542.01.T01:intron 35.0%
AAACAGAATCATGAGGAGGT+TGG + Chr2:54032526-54032545 MsG0280009542.01.T01:intron 40.0%
AAACCTTCTCCTATACCTTG+TGG - Chr2:54032707-54032726 None:intergenic 40.0%
AATCTTGAGAAGCCCACATT+TGG - Chr2:54032861-54032880 None:intergenic 40.0%
ACAACCATCCTCGTATTTGA+AGG - Chr2:54028350-54028369 None:intergenic 40.0%
ACACAACTTGCAATCACAAG+TGG - Chr2:54032556-54032575 None:intergenic 40.0%
ACACAATTGCACCACAATAG+CGG - Chr2:54027543-54027562 None:intergenic 40.0%
ACATAGGTAGTTGGTCAAGA+AGG - Chr2:54031373-54031392 None:intergenic 40.0%
ACCAACTACCTATGTTCCAA+TGG + Chr2:54031378-54031397 MsG0280009542.01.T01:intron 40.0%
ACCTAATATCACTGCAAGGT+TGG - Chr2:54029269-54029288 None:intergenic 40.0%
AGTAGCTAGGCATATAATGG+GGG + Chr2:54030553-54030572 MsG0280009542.01.T01:intron 40.0%
AGTTACAGGGTTTCAGATAG+AGG + Chr2:54030366-54030385 MsG0280009542.01.T01:intron 40.0%
ATATCAGCCAAAATTGGGCA+TGG + Chr2:54026888-54026907 MsG0280009542.01.T01:intron 40.0%
ATCTGACTAACCAGTTAGTG+TGG + Chr2:54028641-54028660 MsG0280009542.01.T01:intron 40.0%
ATGCTTGGAAAGCAACACAA+TGG + Chr2:54030810-54030829 MsG0280009542.01.T01:intron 40.0%
CAAAAGCTGAACCATCTAGT+CGG - Chr2:54030085-54030104 None:intergenic 40.0%
CAAACCATCCAATGTTCACA+GGG - Chr2:54026312-54026331 None:intergenic 40.0%
CAATCATCTGACCTAGATTC+TGG + Chr2:54028406-54028425 MsG0280009542.01.T01:intron 40.0%
CACTTAGCAAAGAAGTAGCT+AGG + Chr2:54030540-54030559 MsG0280009542.01.T01:intron 40.0%
CAGAATCTAGGTCAGATGAT+TGG - Chr2:54028408-54028427 None:intergenic 40.0%
CCCATTTGCATTGCAACTAT+TGG - Chr2:54029552-54029571 None:intergenic 40.0%
CCCTCCAAAACTATACACAA+AGG - Chr2:54028926-54028945 None:intergenic 40.0%
CCTAATATCACTGCAAGGTT+GGG - Chr2:54029268-54029287 None:intergenic 40.0%
CGTGTATCGCAGAATATTAG+TGG - Chr2:54027591-54027610 None:intergenic 40.0%
CTAGACCTAATATCACTGCA+AGG - Chr2:54029273-54029292 None:intergenic 40.0%
CTTATTTATGGTGAGGCAGA+GGG + Chr2:54031580-54031599 MsG0280009542.01.T01:CDS 40.0%
CTTGTGGTACAAACCTAGTT+TGG - Chr2:54026672-54026691 None:intergenic 40.0%
GAAACACTCCTAAAGCTAAG+TGG - Chr2:54027162-54027181 None:intergenic 40.0%
GAAGCAGGACATCTCTTAAT+AGG + Chr2:54029382-54029401 MsG0280009542.01.T01:intron 40.0%
GAGAGCAAAAACTTGATGCT+TGG + Chr2:54030795-54030814 MsG0280009542.01.T01:intron 40.0%
GATTGAATGCTGCATCAGTT+AGG + Chr2:54030178-54030197 MsG0280009542.01.T01:intron 40.0%
GCCTCAAATTCAAATCTTCC+TGG + Chr2:54025901-54025920 MsG0280009542.01.T01:intron 40.0%
GTCTAATCAAGCAAGATGGT+CGG + Chr2:54031776-54031795 MsG0280009542.01.T01:CDS 40.0%
GTGTGGCAGCATATAATGAT+GGG - Chr2:54029458-54029477 None:intergenic 40.0%
GTTTCAAACAGAGCTGCTAT+TGG - Chr2:54032510-54032529 None:intergenic 40.0%
TAACATCGCCATTGGAACAT+AGG - Chr2:54031389-54031408 None:intergenic 40.0%
TACCTTGTGGAGTTACCAAA+AGG - Chr2:54032694-54032713 None:intergenic 40.0%
TAGTGAGAGTGATCCAAACT+AGG + Chr2:54026656-54026675 MsG0280009542.01.T01:intron 40.0%
TATCAGCCAAAATTGGGCAT+GGG + Chr2:54026889-54026908 MsG0280009542.01.T01:intron 40.0%
TCAAACCATCCAATGTTCAC+AGG - Chr2:54026313-54026332 None:intergenic 40.0%
TCCGCCATAATCCAATATGA+CGG - Chr2:54026858-54026877 None:intergenic 40.0%
TGACTCTGTTATGGTAGACA+GGG - Chr2:54032153-54032172 None:intergenic 40.0%
TGATGTTACCCTGTGAACAT+TGG + Chr2:54026301-54026320 MsG0280009542.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr2:54025629-54025648 None:intergenic 40.0%
TGTGGCAGCATATAATGATG+GGG - Chr2:54029457-54029476 None:intergenic 40.0%
TGTTCTTAGGGATTACAGTC+GGG + Chr2:54027078-54027097 MsG0280009542.01.T01:intron 40.0%
TTATTAGGAGGGACCATGTA+AGG - Chr2:54029480-54029499 None:intergenic 40.0%
TTCAGCAGGTGACATTATTG+AGG + Chr2:54032194-54032213 MsG0280009542.01.T01:intron 40.0%
TTGACTCTGTTATGGTAGAC+AGG - Chr2:54032154-54032173 None:intergenic 40.0%
TTGAGCACAAGAGACATGTT+TGG - Chr2:54025822-54025841 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr2:54025630-54025649 None:intergenic 40.0%
TTTCACAAGGAATAGACCTC+AGG + Chr2:54029242-54029261 MsG0280009542.01.T01:intron 40.0%
! AAACTTGCTCCAAAGAAGTG+GGG + Chr2:54029161-54029180 MsG0280009542.01.T01:intron 40.0%
! AGCACTAGTTAAAGAGGTAC+AGG + Chr2:54030152-54030171 MsG0280009542.01.T01:intron 40.0%
! ATAGAGCTATTGTGCCACTA+TGG + Chr2:54026211-54026230 MsG0280009542.01.T01:intron 40.0%
! CAATGGATTTGATGTGGAAC+TGG + Chr2:54032083-54032102 MsG0280009542.01.T01:intron 40.0%
! CATCAAGTTTTTGCTCTCGT+AGG - Chr2:54030793-54030812 None:intergenic 40.0%
! CTAAACTTGCTCCAAAGAAG+TGG + Chr2:54029159-54029178 MsG0280009542.01.T01:intron 40.0%
! GTGGTGCTAATGAAGAAAAC+TGG - Chr2:54027022-54027041 None:intergenic 40.0%
! GTTTGTTAAGGGAAGAGCAT+TGG + Chr2:54030728-54030747 MsG0280009542.01.T01:intron 40.0%
! TAGATGGTTCAGCTTTTGAC+AGG + Chr2:54030087-54030106 MsG0280009542.01.T01:CDS 40.0%
! TCTTATTTATGGTGAGGCAG+AGG + Chr2:54031579-54031598 MsG0280009542.01.T01:CDS 40.0%
! TGAGGCTCTTATTTATGGTG+AGG + Chr2:54031573-54031592 MsG0280009542.01.T01:CDS 40.0%
! TGTCTCATTGACTATCGCAA+GGG + Chr2:54028742-54028761 MsG0280009542.01.T01:intron 40.0%
! TTACTAGCTTATACACCCTC+CGG - Chr2:54025764-54025783 None:intergenic 40.0%
! TTGGTAACTCCACAAGGTAT+AGG + Chr2:54032695-54032714 MsG0280009542.01.T01:intron 40.0%
! TTTGGAGCAAGTTTAGTCAC+TGG - Chr2:54029155-54029174 None:intergenic 40.0%
!! AAGAACGGTGTTGTTAATGG+CGG + Chr2:54026778-54026797 MsG0280009542.01.T01:intron 40.0%
!! ACATCTGGTGTTACATTCCT+CGG - Chr2:54028950-54028969 None:intergenic 40.0%
!! AGATTGGTCTTCGGATAAGT+CGG + Chr2:54026001-54026020 MsG0280009542.01.T01:intron 40.0%
!! GATGAGAAAGTTGGTTCGAA+AGG + Chr2:54030516-54030535 MsG0280009542.01.T01:intron 40.0%
!! GCTGTTAAAGCATTGGAAAG+TGG + Chr2:54031849-54031868 MsG0280009542.01.T01:CDS 40.0%
!! GTGGTTTGTTAAACTTCAGC+TGG - Chr2:54027572-54027591 None:intergenic 40.0%
!! GTGTTCATTTTATCTGGGAC+AGG + Chr2:54032045-54032064 MsG0280009542.01.T01:intron 40.0%
!! GTTAAAGCATTGGAAAGTGG+TGG + Chr2:54031852-54031871 MsG0280009542.01.T01:CDS 40.0%
!! GTTTTTCGTGTGGCTTTTTC+TGG + Chr2:54028815-54028834 MsG0280009542.01.T01:intron 40.0%
!! TTTTAGGAAACTGAGAGCTC+CGG - Chr2:54024942-54024961 None:intergenic 40.0%
!!! CCCAATTTTGGCTGATATGT+TGG - Chr2:54026886-54026905 None:intergenic 40.0%
!!! CCCTTTGTGTATAGTTTTGG+AGG + Chr2:54028922-54028941 MsG0280009542.01.T01:intron 40.0%
AAAAAAGGGCAAGCGTGAAG+GGG - Chr2:54031452-54031471 None:intergenic 45.0%
AACAGAGCTGCTATTGGTGT+TGG - Chr2:54032504-54032523 None:intergenic 45.0%
AAGACCTCTGCTACAGACAA+TGG - Chr2:54031658-54031677 None:intergenic 45.0%
AATGCTGAGTGGTGAGAGAA+GGG + Chr2:54030686-54030705 MsG0280009542.01.T01:intron 45.0%
ACACAAGAATTGCTACCACC+AGG - Chr2:54025922-54025941 None:intergenic 45.0%
ACGGGGAAATGAGTTGTGTA+AGG + Chr2:54030647-54030666 MsG0280009542.01.T01:intron 45.0%
ACTAGTAACCATGACTGGAG+TGG + Chr2:54032472-54032491 MsG0280009542.01.T01:intron 45.0%
ACTCCACAAGGTATAGGAGA+AGG + Chr2:54032701-54032720 MsG0280009542.01.T01:intron 45.0%
AGGGAAAATTTGGAGGTGAG+AGG - Chr2:54024789-54024808 None:intergenic 45.0%
ATATGCTGCCACACCTTACA+TGG + Chr2:54029464-54029483 MsG0280009542.01.T01:intron 45.0%
ATGAGGATTCGACGCCTATA+TGG - Chr2:54029358-54029377 None:intergenic 45.0%
ATGGCCTTCAAATACGAGGA+TGG + Chr2:54028343-54028362 MsG0280009542.01.T01:intron 45.0%
CAAGTTACTGGCCACCATAT+AGG + Chr2:54029341-54029360 MsG0280009542.01.T01:intron 45.0%
CCAATGCTTTAACAGCAGCT+CGG - Chr2:54031845-54031864 None:intergenic 45.0%
CCCAACCTTGCAGTGATATT+AGG + Chr2:54029265-54029284 MsG0280009542.01.T01:intron 45.0%
CGAATCCTCATTCATGAAGC+AGG + Chr2:54029367-54029386 MsG0280009542.01.T01:intron 45.0%
CGGGGAAATGAGTTGTGTAA+GGG + Chr2:54030648-54030667 MsG0280009542.01.T01:intron 45.0%
CGTAACTGCAGAACCGTTTA+CGG + Chr2:54024982-54025001 MsG0280009542.01.T01:CDS 45.0%
CTAGAATCACCCCTCGAATT+GGG - Chr2:54029527-54029546 None:intergenic 45.0%
CTCTTTCTCAACGCAGTTCA+TGG - Chr2:54027437-54027456 None:intergenic 45.0%
CTTAAGCACAATGGGTGCAA+AGG + Chr2:54026625-54026644 MsG0280009542.01.T01:intron 45.0%
CTTGCAGATGCTGCATGTTT+AGG + Chr2:54032126-54032145 MsG0280009542.01.T01:intron 45.0%
GAAAAAAGGGCAAGCGTGAA+GGG - Chr2:54031453-54031472 None:intergenic 45.0%
GACACTAGTAATCTAGGGGT+TGG + Chr2:54025284-54025303 MsG0280009542.01.T01:intron 45.0%
GATGTCCTGCTTCATGAATG+AGG - Chr2:54029375-54029394 None:intergenic 45.0%
GCAATGCAAATGGGTATCCA+AGG + Chr2:54029558-54029577 MsG0280009542.01.T01:CDS 45.0%
GCAGATTCTATATTCCTGGG+AGG + Chr2:54029298-54029317 MsG0280009542.01.T01:intron 45.0%
GCCATTGGAACATAGGTAGT+TGG - Chr2:54031382-54031401 None:intergenic 45.0%
GCCGTCATATTGGATTATGG+CGG + Chr2:54026854-54026873 MsG0280009542.01.T01:intron 45.0%
GCTAACCCGTATGCAACTTA+AGG - Chr2:54031965-54031984 None:intergenic 45.0%
GCTATAGCACTGTAACGTAG+TGG + Chr2:54027639-54027658 MsG0280009542.01.T01:intron 45.0%
GCTTGGCTTAGGCTTCAATT+GGG + Chr2:54025960-54025979 MsG0280009542.01.T01:intron 45.0%
GGCATCAGCTGTAAGTCTAA+TGG - Chr2:54028387-54028406 None:intergenic 45.0%
GGGAAAATTTGGAGGTGAGA+GGG - Chr2:54024788-54024807 None:intergenic 45.0%
GGTGGTAGCAATTCTTGTGT+TGG + Chr2:54025922-54025941 MsG0280009542.01.T01:intron 45.0%
GGTGTGGCAGCATATAATGA+TGG - Chr2:54029459-54029478 None:intergenic 45.0%
GTTACCCTGTGAACATTGGA+TGG + Chr2:54026305-54026324 MsG0280009542.01.T01:intron 45.0%
GTTGTGTAGGCTTGTGACAT+CGG + Chr2:54025311-54025330 MsG0280009542.01.T01:intron 45.0%
TAAACCAGAGCAACCAGTTG+TGG - Chr2:54031682-54031701 None:intergenic 45.0%
TAAAGGAAGGCCACACTAAC+TGG - Chr2:54028654-54028673 None:intergenic 45.0%
TAATGGGATGCCCAATTCGA+GGG + Chr2:54029514-54029533 MsG0280009542.01.T01:CDS 45.0%
TACGAGGATGGTTGTAGAGT+TGG + Chr2:54028355-54028374 MsG0280009542.01.T01:intron 45.0%
TGAAAAAAGGGCAAGCGTGA+AGG - Chr2:54031454-54031473 None:intergenic 45.0%
TGAGAGTGAGAGGAGAGAAA+CGG + Chr2:54030628-54030647 MsG0280009542.01.T01:intron 45.0%
TTCCTATACGGCCAGAATCT+AGG - Chr2:54028420-54028439 None:intergenic 45.0%
TTCTGCAGTTACGCGTTGTT+CGG - Chr2:54024975-54024994 None:intergenic 45.0%
TTGGCGAATAGATGCCATGA+AGG + Chr2:54030747-54030766 MsG0280009542.01.T01:intron 45.0%
TTTGCTCTCGTAGGCATGTA+AGG - Chr2:54030784-54030803 None:intergenic 45.0%
! ACAGAGCTGCTATTGGTGTT+GGG - Chr2:54032503-54032522 None:intergenic 45.0%
! GAAAGTGCGGGAAAATTGAG+GGG - Chr2:54024825-54024844 None:intergenic 45.0%
! GCAGCTGAGGCTCTTATTTA+TGG + Chr2:54031568-54031587 MsG0280009542.01.T01:CDS 45.0%
! GGAAAGTGCGGGAAAATTGA+GGG - Chr2:54024826-54024845 None:intergenic 45.0%
! GTAGCTAGGCATATAATGGG+GGG + Chr2:54030554-54030573 MsG0280009542.01.T01:intron 45.0%
! GTGTCTCATTGACTATCGCA+AGG + Chr2:54028741-54028760 MsG0280009542.01.T01:intron 45.0%
! GTTCGGTTTCGAGGGATTTT+AGG - Chr2:54024958-54024977 None:intergenic 45.0%
! TCTAGAATCACCCCTCGAAT+TGG - Chr2:54029528-54029547 None:intergenic 45.0%
! TGTTGTCCCATGCCCAATTT+TGG - Chr2:54026898-54026917 None:intergenic 45.0%
! TTAGGCAGGGACTCAGTTTT+GGG + Chr2:54030028-54030047 MsG0280009542.01.T01:intron 45.0%
! TTCCGTGAGTTGGAGATGTT+CGG + Chr2:54025043-54025062 MsG0280009542.01.T01:CDS 45.0%
! TTTAGGCAGGGACTCAGTTT+TGG + Chr2:54030027-54030046 MsG0280009542.01.T01:intron 45.0%
!! GATGGTTGTAGAGTTGGTAG+AGG + Chr2:54028361-54028380 MsG0280009542.01.T01:intron 45.0%
!! GTGTTGGTTCTGTCCATAGA+GGG + Chr2:54025938-54025957 MsG0280009542.01.T01:intron 45.0%
!! TGCCTTTTGGTAACTCCACA+AGG + Chr2:54032689-54032708 MsG0280009542.01.T01:CDS 45.0%
!! TGTGTTGGTTCTGTCCATAG+AGG + Chr2:54025937-54025956 MsG0280009542.01.T01:intron 45.0%
!! ATAATAAATAAAGAATATAT+AGG - Chr2:54032449-54032468 None:intergenic 5.0%
AAAAAGGGCAAGCGTGAAGG+GGG - Chr2:54031451-54031470 None:intergenic 50.0%
AATGGGATGCCCAATTCGAG+GGG + Chr2:54029515-54029534 MsG0280009542.01.T01:CDS 50.0%
AATTTGGAGGTGAGAGGGAG+AGG - Chr2:54024783-54024802 None:intergenic 50.0%
ACCTCTGCTACAGACAATGG+AGG - Chr2:54031655-54031674 None:intergenic 50.0%
ACTGCAGAACCGTTTACGGA+CGG + Chr2:54024986-54025005 MsG0280009542.01.T01:CDS 50.0%
AGAACTTCCCAATCCCTCTG+CGG - Chr2:54025070-54025089 None:intergenic 50.0%
AGAGTGAGAGGAGAGAAACG+GGG + Chr2:54030630-54030649 MsG0280009542.01.T01:intron 50.0%
AGCAGAGGTCTTTCCACAAC+TGG + Chr2:54031666-54031685 MsG0280009542.01.T01:CDS 50.0%
AGGATTCGACGCCTATATGG+TGG - Chr2:54029355-54029374 None:intergenic 50.0%
ATGGCCTGGGATGAGAAAGT+TGG + Chr2:54030507-54030526 MsG0280009542.01.T01:intron 50.0%
ATTTATGGTGAGGCAGAGGG+TGG + Chr2:54031583-54031602 MsG0280009542.01.T01:CDS 50.0%
CACATAGTGTGAGCCTGCTT+TGG + Chr2:54026262-54026281 MsG0280009542.01.T01:intron 50.0%
CACTCACCGCCTTCAAAGAA+TGG + Chr2:54024879-54024898 MsG0280009542.01.T01:CDS 50.0%
CAGCATCTGCAAGTACGCAA+TGG - Chr2:54032119-54032138 None:intergenic 50.0%
CCGAGCTGCTGTTAAAGCAT+TGG + Chr2:54031842-54031861 MsG0280009542.01.T01:CDS 50.0%
CCTCTGCGCAAAGTAGGAAT+GGG + Chr2:54028045-54028064 MsG0280009542.01.T01:intron 50.0%
CGAACCAACTTTCTCATCCC+AGG - Chr2:54030514-54030533 None:intergenic 50.0%
CTAATGGGATGCCCAATTCG+AGG + Chr2:54029513-54029532 MsG0280009542.01.T01:CDS 50.0%
CTCGAATTGGGCATCCCATT+AGG - Chr2:54029515-54029534 None:intergenic 50.0%
CTTGAGAAGCCCACATTTGG+TGG - Chr2:54032858-54032877 None:intergenic 50.0%
CTTTCCACAACTGGTTGCTC+TGG + Chr2:54031675-54031694 MsG0280009542.01.T01:intron 50.0%
GAAACCCAGTCTCGAGTCTA+AGG - Chr2:54026028-54026047 None:intergenic 50.0%
GAATCGAGACCGAGTCAACT+CGG - Chr2:54025026-54025045 None:intergenic 50.0%
GAATGCTGAGTGGTGAGAGA+AGG + Chr2:54030685-54030704 MsG0280009542.01.T01:intron 50.0%
GAATGCTGCATCAGTTAGGG+TGG + Chr2:54030182-54030201 MsG0280009542.01.T01:intron 50.0%
GACCGAACATCTCCAACTCA+CGG - Chr2:54025048-54025067 None:intergenic 50.0%
GACCTAGATTCTGGCCGTAT+AGG + Chr2:54028415-54028434 MsG0280009542.01.T01:intron 50.0%
GAGAGTGAGAGGAGAGAAAC+GGG + Chr2:54030629-54030648 MsG0280009542.01.T01:intron 50.0%
GAGCCAAAAACCCTCTCTAC+CGG + Chr2:54026819-54026838 MsG0280009542.01.T01:intron 50.0%
GAGGACACCCTCAAAAGACT+TGG + Chr2:54027742-54027761 MsG0280009542.01.T01:intron 50.0%
GAGGGGAGGTGAGAAAATGA+GGG - Chr2:54024808-54024827 None:intergenic 50.0%
GCAAATGGGTATCCAAGGAC+AGG + Chr2:54029563-54029582 MsG0280009542.01.T01:CDS 50.0%
GCAGTCTGAGTGCGGTAATT+AGG + Chr2:54031874-54031893 MsG0280009542.01.T01:intron 50.0%
GCGAATAGATGCCATGAAGG+TGG + Chr2:54030750-54030769 MsG0280009542.01.T01:intron 50.0%
GGAGAAACTCCGTCCGTAAA+CGG - Chr2:54024998-54025017 None:intergenic 50.0%
GGCGCCGTCATATTGGATTA+TGG + Chr2:54026851-54026870 MsG0280009542.01.T01:intron 50.0%
GGCTTGGCTTAGGCTTCAAT+TGG + Chr2:54025959-54025978 MsG0280009542.01.T01:intron 50.0%
GTAAAACGCAAAGACCTCGC+CGG + Chr2:54024920-54024939 MsG0280009542.01.T01:CDS 50.0%
GTAGTCGCGCCATTCTTTGA+AGG - Chr2:54024891-54024910 None:intergenic 50.0%
GTCTGAGTGCGGTAATTAGG+AGG + Chr2:54031877-54031896 MsG0280009542.01.T01:intron 50.0%
GTTTACGGACGGAGTTTCTC+CGG + Chr2:54024997-54025016 MsG0280009542.01.T01:CDS 50.0%
TACGCGTTGTTCGGTTTCGA+GGG - Chr2:54024966-54024985 None:intergenic 50.0%
TAGAGGCGATACCGCTATTG+TGG + Chr2:54027529-54027548 MsG0280009542.01.T01:intron 50.0%
TCCAAAGAAGTGGGGTCTCT+CGG + Chr2:54029169-54029188 MsG0280009542.01.T01:intron 50.0%
TGAGGGGAGGTGAGAAAATG+AGG - Chr2:54024809-54024828 None:intergenic 50.0%
TGCACCTTCCAAACCAGTTG+CGG - Chr2:54028981-54029000 None:intergenic 50.0%
TGCGGTAATTAGGAGGATCG+AGG + Chr2:54031884-54031903 MsG0280009542.01.T01:intron 50.0%
TGTCACAAGCCTACACAACC+AGG - Chr2:54025310-54025329 None:intergenic 50.0%
TGTCTTGCCAAACACACCCT+AGG + Chr2:54025879-54025898 MsG0280009542.01.T01:intron 50.0%
TTACGCGTTGTTCGGTTTCG+AGG - Chr2:54024967-54024986 None:intergenic 50.0%
! ATTTTCCCGCACTTTCCCTC+CGG + Chr2:54024829-54024848 MsG0280009542.01.T01:CDS 50.0%
! CATAGTGATGGGACATGCCT+TGG + Chr2:54030893-54030912 MsG0280009542.01.T01:intron 50.0%
! CATTCTTTGAAGGCGGTGAG+TGG - Chr2:54024881-54024900 None:intergenic 50.0%
! CTCATTGACTATCGCAAGGG+TGG + Chr2:54028745-54028764 MsG0280009542.01.T01:intron 50.0%
! GGGAAAGTGCGGGAAAATTG+AGG - Chr2:54024827-54024846 None:intergenic 50.0%
! GTCGGGCTTTTGCTTTCACA+AGG + Chr2:54027095-54027114 MsG0280009542.01.T01:intron 50.0%
! GTTTGTTCAACGGTTTGGCG+TGG - Chr2:54027041-54027060 None:intergenic 50.0%
! TTTGAGGCCTAGGGTGTGTT+TGG - Chr2:54025889-54025908 None:intergenic 50.0%
! TTTTGCTGGCATTGCAGCTG+AGG + Chr2:54031555-54031574 MsG0280009542.01.T01:CDS 50.0%
!! ACGGTGTTGTTAATGGCGGA+TGG + Chr2:54026782-54026801 MsG0280009542.01.T01:intron 50.0%
!! CAGAGCTGCTATTGGTGTTG+GGG - Chr2:54032502-54032521 None:intergenic 50.0%
!! TAGTAATCTAGGGGTTGGCC+TGG + Chr2:54025289-54025308 MsG0280009542.01.T01:intron 50.0%
!! TCAGGTCTGGGCTTTTTCTC+TGG + Chr2:54028784-54028803 MsG0280009542.01.T01:intron 50.0%
!!! GGCGTTGGTTGTTTTTCGTG+TGG + Chr2:54028805-54028824 MsG0280009542.01.T01:intron 50.0%
!!! GGGTTTTTGGCTCTTTGCCA+TGG - Chr2:54026812-54026831 None:intergenic 50.0%
!!! GTATAGTTTTGGAGGGTCCG+AGG + Chr2:54028930-54028949 MsG0280009542.01.T01:intron 50.0%
AAAAGGGCAAGCGTGAAGGG+GGG - Chr2:54031450-54031469 None:intergenic 55.0%
AAGAAGTGGGGTCTCTCGGA+TGG + Chr2:54029173-54029192 MsG0280009542.01.T01:intron 55.0%
AAGTGGTGGCAGTCTGAGTG+CGG + Chr2:54031866-54031885 MsG0280009542.01.T01:CDS 55.0%
AGCCTAAGCCAAGCCCTCTA+TGG - Chr2:54025954-54025973 None:intergenic 55.0%
AGGAGGGACCATGTAAGGTG+TGG - Chr2:54029475-54029494 None:intergenic 55.0%
AGGTCCACACACCACCTTCA+TGG - Chr2:54030764-54030783 None:intergenic 55.0%
AGTGCGGGAAAATTGAGGGG+AGG - Chr2:54024822-54024841 None:intergenic 55.0%
ATGGGACATGCCTTGGAGGA+TGG + Chr2:54030900-54030919 MsG0280009542.01.T01:intron 55.0%
CACAAAGCAGCCGGTAGAGA+GGG - Chr2:54026832-54026851 None:intergenic 55.0%
CATCTAGTCGGCCTTCAGCA+AGG - Chr2:54030073-54030092 None:intergenic 55.0%
CCCATTCCTACTTTGCGCAG+AGG - Chr2:54028048-54028067 None:intergenic 55.0%
CGGTCCTTAGACTCGAGACT+GGG + Chr2:54026021-54026040 MsG0280009542.01.T01:intron 55.0%
CTTGAGCTCCGCAACTGGTT+TGG + Chr2:54028970-54028989 MsG0280009542.01.T01:intron 55.0%
CTTGCTGAAGGCCGACTAGA+TGG + Chr2:54030071-54030090 MsG0280009542.01.T01:CDS 55.0%
GAAAAAGCCCAGACCTGACC+AGG - Chr2:54028782-54028801 None:intergenic 55.0%
GACATCGGAGTGTGCTCGTT+TGG + Chr2:54025326-54025345 MsG0280009542.01.T01:intron 55.0%
GATGCCATGAAGGTGGTGTG+TGG + Chr2:54030757-54030776 MsG0280009542.01.T01:intron 55.0%
GATGTCTTGAGCTCCGCAAC+TGG + Chr2:54028965-54028984 MsG0280009542.01.T01:intron 55.0%
GCATTGCCTCTGCGCAAAGT+AGG + Chr2:54028039-54028058 MsG0280009542.01.T01:intron 55.0%
GCCTCCATTGTCTGTAGCAG+AGG + Chr2:54031651-54031670 MsG0280009542.01.T01:CDS 55.0%
GCCTCTGCGCAAAGTAGGAA+TGG + Chr2:54028044-54028063 MsG0280009542.01.T01:intron 55.0%
GCTTTGTGGCGCCGTCATAT+TGG + Chr2:54026844-54026863 MsG0280009542.01.T01:intron 55.0%
GGTTCTGTCCATAGAGGGCT+TGG + Chr2:54025943-54025962 MsG0280009542.01.T01:intron 55.0%
GTCCATAGAGGGCTTGGCTT+AGG + Chr2:54025949-54025968 MsG0280009542.01.T01:intron 55.0%
GTGAGAGGGAGAGGAAGACA+TGG - Chr2:54024774-54024793 None:intergenic 55.0%
GTTGCGGAGCTCAAGACATC+TGG - Chr2:54028965-54028984 None:intergenic 55.0%
TCCACATGGCTGAGAGTGAG+AGG + Chr2:54030618-54030637 MsG0280009542.01.T01:intron 55.0%
TCCGAGAGACCCCACTTCTT+TGG - Chr2:54029173-54029192 None:intergenic 55.0%
TCCTCTCACTCTCAGCCATG+TGG - Chr2:54030622-54030641 None:intergenic 55.0%
TCGGTCCTTAGACTCGAGAC+TGG + Chr2:54026020-54026039 MsG0280009542.01.T01:intron 55.0%
TCGGTCTCGATTCCGTGAGT+TGG + Chr2:54025033-54025052 MsG0280009542.01.T01:CDS 55.0%
TGGGACATGCCTTGGAGGAT+GGG + Chr2:54030901-54030920 MsG0280009542.01.T01:intron 55.0%
TGTCTGTCCTGGTCAGGTCT+GGG + Chr2:54028772-54028791 MsG0280009542.01.T01:intron 55.0%
TTGTCTGTCCTGGTCAGGTC+TGG + Chr2:54028771-54028790 MsG0280009542.01.T01:intron 55.0%
! AGTGATGGGACATGCCTTGG+AGG + Chr2:54030896-54030915 MsG0280009542.01.T01:intron 55.0%
! CAGCCGGTAGAGAGGGTTTT+TGG - Chr2:54026825-54026844 None:intergenic 55.0%
! CTTTGAAGGCGGTGAGTGGT+CGG - Chr2:54024877-54024896 None:intergenic 55.0%
! GTCGCGCCATTCTTTGAAGG+CGG - Chr2:54024888-54024907 None:intergenic 55.0%
!! AGCTCCGCAACTGGTTTGGA+AGG + Chr2:54028974-54028993 MsG0280009542.01.T01:intron 55.0%
!! CTGGGCTTTTTCTCTGGCGT+TGG + Chr2:54028790-54028809 MsG0280009542.01.T01:intron 55.0%
!! TAATGGCGGATGGCAGTCCA+TGG + Chr2:54026792-54026811 MsG0280009542.01.T01:intron 55.0%
AGAGGTTTGCGTGTCACCGG+AGG - Chr2:54024848-54024867 None:intergenic 60.0%
AGGGTGGTGCTTGTCTGTCC+TGG + Chr2:54028761-54028780 MsG0280009542.01.T01:intron 60.0%
ATGCCTTGGAGGATGGGCAC+TGG + Chr2:54030907-54030926 MsG0280009542.01.T01:intron 60.0%
CCACAAAGCAGCCGGTAGAG+AGG - Chr2:54026833-54026852 None:intergenic 60.0%
CGGAGAGGTTTGCGTGTCAC+CGG - Chr2:54024851-54024870 None:intergenic 60.0%
GACCGAGTCAACTCGGCTAC+CGG - Chr2:54025019-54025038 None:intergenic 60.0%
GAGCTAGACAGGTACCTCCC+AGG - Chr2:54029315-54029334 None:intergenic 60.0%
GAGGTTTGCGTGTCACCGGA+GGG - Chr2:54024847-54024866 None:intergenic 60.0%
GGAGATGTTCGGTCCGCAGA+GGG + Chr2:54025054-54025073 MsG0280009542.01.T01:CDS 60.0%
GGGGTTCACCACTCCAGTCA+TGG - Chr2:54032483-54032502 None:intergenic 60.0%
GGTGCTTGTCTGTCCTGGTC+AGG + Chr2:54028766-54028785 MsG0280009542.01.T01:intron 60.0%
GTACCAGTGCCCATCCTCCA+AGG - Chr2:54030913-54030932 None:intergenic 60.0%
GTGTCACCGGAGGGAAAGTG+CGG - Chr2:54024838-54024857 None:intergenic 60.0%
GTTCGGTCCGCAGAGGGATT+GGG + Chr2:54025060-54025079 MsG0280009542.01.T01:CDS 60.0%
GTTGCCAGCGACCTTGCTGA+AGG + Chr2:54030059-54030078 MsG0280009542.01.T01:CDS 60.0%
TCACTGCAAGGTTGGGCCTG+AGG - Chr2:54029261-54029280 None:intergenic 60.0%
TGGAGATGTTCGGTCCGCAG+AGG + Chr2:54025053-54025072 MsG0280009542.01.T01:CDS 60.0%
TGTTCGGTCCGCAGAGGGAT+TGG + Chr2:54025059-54025078 MsG0280009542.01.T01:CDS 60.0%
! CCTCTCTACCGGCTGCTTTG+TGG + Chr2:54026830-54026849 MsG0280009542.01.T01:intron 60.0%
! CTCCGGTAGCCGAGTTGACT+CGG + Chr2:54025014-54025033 MsG0280009542.01.T01:CDS 60.0%
! TGTCACCGGAGGGAAAGTGC+GGG - Chr2:54024837-54024856 None:intergenic 60.0%
!! AGGGGTTGGCCTGGTTGTGT+AGG + Chr2:54025298-54025317 MsG0280009542.01.T01:intron 60.0%
AGGCGGTGAGTGGTCGGAGA+CGG - Chr2:54024871-54024890 None:intergenic 65.0%
GCAAGCGTGAAGGGGGGCTT+AGG - Chr2:54031444-54031463 None:intergenic 65.0%
GGAAACTGAGAGCTCCGGCG+AGG - Chr2:54024937-54024956 None:intergenic 65.0%
GTGAGTGGTCGGAGACGGAG+AGG - Chr2:54024866-54024885 None:intergenic 65.0%
TCGGCCTTCAGCAAGGTCGC+TGG - Chr2:54030066-54030085 None:intergenic 65.0%
TGACGGCGCCACAAAGCAGC+CGG - Chr2:54026841-54026860 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 54024740 54032911 54024740 ID=MsG0280009542.01;Name=MsG0280009542.01
Chr2 mRNA 54024740 54032911 54024740 ID=MsG0280009542.01.T01;Parent=MsG0280009542.01;Name=MsG0280009542.01.T01;_AED=0.45;_eAED=0.54;_QI=27|0.33|0.42|1|1|1|7|0|349
Chr2 exon 54032773 54032911 54032773 ID=MsG0280009542.01.T01:exon:6090;Parent=MsG0280009542.01.T01
Chr2 exon 54032643 54032710 54032643 ID=MsG0280009542.01.T01:exon:6089;Parent=MsG0280009542.01.T01
Chr2 exon 54031774 54031887 54031774 ID=MsG0280009542.01.T01:exon:6088;Parent=MsG0280009542.01.T01
Chr2 exon 54031540 54031687 54031540 ID=MsG0280009542.01.T01:exon:6087;Parent=MsG0280009542.01.T01
Chr2 exon 54030032 54030108 54030032 ID=MsG0280009542.01.T01:exon:6086;Parent=MsG0280009542.01.T01
Chr2 exon 54029508 54029584 54029508 ID=MsG0280009542.01.T01:exon:6085;Parent=MsG0280009542.01.T01
Chr2 exon 54024740 54025193 54024740 ID=MsG0280009542.01.T01:exon:6084;Parent=MsG0280009542.01.T01
Chr2 five_prime_UTR 54024740 54024766 54024740 ID=MsG0280009542.01.T01:five_prime_utr;Parent=MsG0280009542.01.T01
Chr2 CDS 54024767 54025193 54024767 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Chr2 CDS 54029508 54029584 54029508 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Chr2 CDS 54030032 54030108 54030032 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Chr2 CDS 54031540 54031687 54031540 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Chr2 CDS 54031774 54031887 54031774 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Chr2 CDS 54032643 54032710 54032643 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Chr2 CDS 54032773 54032911 54032773 ID=MsG0280009542.01.T01:cds;Parent=MsG0280009542.01.T01
Gene Sequence

>MsG0280009542.01.T01

ATGACCATGTCTTCCTCTCCCTCTCACCTCCAAATTTTCCCTCATTTTCTCACCTCCCCTCAATTTTCCCGCACTTTCCCTCCGGTGACACGCAAACCTCTCCGTCTCCGACCACTCACCGCCTTCAAAGAATGGCGCGACTACGAAGAAGCAGTAAAACGCAAAGACCTCGCCGGAGCTCTCAGTTTCCTAAAATCCCTCGAAACCGAACAACGCGTAACTGCAGAACCGTTTACGGACGGAGTTTCTCCGGTAGCCGAGTTGACTCGGTCTCGATTCCGTGAGTTGGAGATGTTCGGTCCGCAGAGGGATTGGGAAGTTCTTGATACGTGTATGAATGCTGATAATATGAAACTTGTTGCGAATGCTTATAAGTTTCTTAAGGATAGGGGTTTTTTGCCTAATTTTGGTAAATGCAGAAATATTGCTTACCTAATGGGATGCCCAATTCGAGGGGTGATTCTAGATCCAATAGTTGCAATGCAAATGGGTATCCAAGGACAGGCAGGGACTCAGTTTTGGGATGAAAAAGTTGCCAGCGACCTTGCTGAAGGCCGACTAGATGGTTCAGCTTTTGACAGGTACTGTATGGTACTTTTTGCTGGCATTGCAGCTGAGGCTCTTATTTATGGTGAGGCAGAGGGTGGAGAAAATGATGAAAATCTATTTAGAAGCGTCTGTCTTCTTCTTGAGCCTCCATTGTCTGTAGCAGAGGTCTTTCCACAACTGATGTCTAATCAAGCAAGATGGTCGGTTTTGCAATCTTATAATTTGCTCAAGTGGCATAAAGCTGCACACCGAGCTGCTGTTAAAGCATTGGAAAGTGGTGGCAGTCTGAGTGCGATTGTTAATAATCTTCATATTGATATTATGTTGTTTCAAGTAGTGATGCCTTTTGGTAACTCCACAAGATACAATAGGGACATGTTTTACAATATGAAAGGACACTATGAGCAGTCTGCTATCCCTTCAATATGTATTGTTAGTGTTAAACCACCAAATGTGGGCTTCTCAAGATTTGTATATCAAACCGGCTACAAGCATTACTAA

Protein sequence

>MsG0280009542.01.T01

MTMSSSPSHLQIFPHFLTSPQFSRTFPPVTRKPLRLRPLTAFKEWRDYEEAVKRKDLAGALSFLKSLETEQRVTAEPFTDGVSPVAELTRSRFRELEMFGPQRDWEVLDTCMNADNMKLVANAYKFLKDRGFLPNFGKCRNIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKVASDLAEGRLDGSAFDRYCMVLFAGIAAEALIYGEAEGGENDENLFRSVCLLLEPPLSVAEVFPQLMSNQARWSVLQSYNLLKWHKAAHRAAVKALESGGSLSAIVNNLHIDIMLFQVVMPFGNSTRYNRDMFYNMKGHYEQSAIPSICIVSVKPPNVGFSRFVYQTGYKHY*