AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0769830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769830 MtrunA17_Chr5g0422531 96.460 226 4 1 223 448 135 356 1.02e-162 462
Msa0769830 MtrunA17_Chr5g0422531 97.222 144 4 0 1 144 1 144 2.83e-93 286
Msa0769830 MtrunA17_Chr5g0402401 70.588 221 65 0 228 448 131 351 1.35e-114 340
Msa0769830 MtrunA17_Chr5g0402401 37.681 138 74 3 19 151 16 146 7.86e-15 75.5
Msa0769830 MtrunA17_Chr4g0011731 54.545 220 99 1 228 446 163 382 1.89e-81 256
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769830 AT1G13270.1 82.805 221 38 0 228 448 149 369 1.97e-136 397
Msa0769830 AT1G13270.1 56.934 137 56 2 9 144 23 157 3.35e-37 140
Msa0769830 AT3G25740.1 74.779 226 50 3 223 446 121 341 1.47e-118 350
Msa0769830 AT3G25740.1 59.551 89 36 0 59 147 45 133 2.18e-23 101
Msa0769830 AT4G37040.1 67.873 221 71 0 228 448 130 350 9.08e-108 323
Msa0769830 AT4G37040.1 38.849 139 81 3 14 151 10 145 8.11e-17 82.0
Msa0769830 AT2G45240.1 55.000 220 98 1 228 446 164 383 1.22e-81 258
Msa0769830 AT1G13270.2 85.950 121 17 0 231 351 152 272 8.96e-72 228
Msa0769830 AT1G13270.2 56.934 137 56 2 9 144 23 157 1.10e-37 139
Msa0769830 AT2G45240.2 54.140 157 72 0 228 384 164 320 1.49e-55 187
Msa0769830 AT3G25740.2 76.923 65 11 1 223 287 121 181 1.12e-25 105
Msa0769830 AT3G25740.2 59.551 89 36 0 59 147 45 133 1.31e-23 99.8

Find 117 sgRNAs with CRISPR-Local

Find 701 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATATTCAGTTCCCATTTC+TGG 0.169592 5_2:+39399386 None:intergenic
TGGATACCTCTTGATTCTTC+TGG 0.183050 5_2:+39401500 None:intergenic
TAAAATTATATTATATCTTT+TGG 0.192336 5_2:-39391310 Msa0769830:three_prime_UTR
GTCTGCCTTCAGTTTCCTTC+TGG 0.213324 5_2:-39391547 Msa0769830:intron
GTAACTGTTGTCCAGTTATC+TGG 0.270072 5_2:+39391743 None:intergenic
TATCCCTCACCCCTTGGTTA+TGG 0.287436 5_2:-39396831 Msa0769830:CDS
TACGTAGCCTCAGATAAATT+TGG 0.292410 5_2:+39398255 None:intergenic
AGGTGATGTGTCGCCATAAA+AGG 0.304209 5_2:+39401733 None:intergenic
CTGTTCCTCTGTACTGAAAA+TGG 0.306741 5_2:-39401804 Msa0769830:exon
TCAATTTCTACCACGTTTCC+CGG 0.315068 5_2:-39401704 Msa0769830:intron
TGCATCGATGCTGCACAAAA+TGG 0.317080 5_2:-39397927 Msa0769830:CDS
ACCTGATTCACGGCAGTTAC+AGG 0.325575 5_2:-39396754 Msa0769830:intron
ACCTGTAACTGCCGTGAATC+AGG 0.336343 5_2:+39396753 None:intergenic
GTATTTACTGATTGGTTTAC+CGG 0.340058 5_2:-39397870 Msa0769830:CDS
TCACGATGATGGTAAATATA+TGG 0.340395 5_2:+39392618 None:intergenic
ACTCACTGTTGGAGATTTGC+TGG 0.344290 5_2:-39398505 Msa0769830:intron
GCATTACATGGCCAGATAAC+TGG 0.349858 5_2:-39391754 Msa0769830:CDS
CTCAGATGTACTTCCAGAAA+TGG 0.356951 5_2:-39399399 Msa0769830:CDS
GTCATCTCAGCAGGCCCCTC+TGG 0.371745 5_2:+39391412 None:intergenic
ATGAAGAGAACGTGAACTTC+AGG 0.387349 5_2:-39399519 Msa0769830:intron
GTAAATACGACGCGATTTGT+AGG 0.387674 5_2:+39397885 None:intergenic
GGCCTGCTGAGATGACTATC+TGG 0.389121 5_2:-39391405 Msa0769830:three_prime_UTR
CCCTCACCCCTTGGTTATGG+TGG 0.394047 5_2:-39396828 Msa0769830:CDS
TGCAGAGCCTATTCTTTCAA+TGG 0.401624 5_2:-39391789 Msa0769830:intron
ATCGCGTCGTATTTACTGAT+TGG 0.402168 5_2:-39397878 Msa0769830:CDS
TCCTTTCTCCAAGCACTCTT+CGG 0.408446 5_2:+39395497 None:intergenic
ATAGAAAAGGGCCTCCATTA+AGG 0.411437 5_2:-39399484 Msa0769830:CDS
ACTTCGCAGGAACTTTGGTT+AGG 0.412046 5_2:-39399298 Msa0769830:CDS
TCGCTTTGTTAGGGATATCA+TGG 0.416903 5_2:-39395800 Msa0769830:intron
GAAGGTCAAACATTTACAAT+TGG 0.419869 5_2:-39392204 Msa0769830:intron
AGTGAGCATGCCGAAAAGTA+TGG 0.420168 5_2:-39392699 Msa0769830:CDS
ACGTAGCCTCAGATAAATTT+GGG 0.426964 5_2:+39398256 None:intergenic
GGAATAGCCGTTTGCAAAGA+TGG 0.430491 5_2:-39395477 Msa0769830:CDS
CTTGAACTTCGCAGGAACTT+TGG 0.435030 5_2:-39399303 Msa0769830:CDS
ACCATTCTGATAACAAGAAC+TGG 0.435387 5_2:-39391686 Msa0769830:CDS
GGTGCTTATCCCTCACCCCT+TGG 0.435960 5_2:-39396837 Msa0769830:CDS
CGAAAAGGGATTTGTTGCAT+TGG 0.438861 5_2:-39398547 Msa0769830:CDS
GCAGAGCCTATTCTTTCAAT+GGG 0.447951 5_2:-39391788 Msa0769830:intron
TGCCTTCAGTTTCCTTCTGG+AGG 0.453439 5_2:-39391544 Msa0769830:intron
AAGTGAAGGTCGAAACGAAA+AGG 0.454304 5_2:-39398562 Msa0769830:CDS
GGAGGCTTTAGTATATCATC+AGG 0.458379 5_2:+39399431 None:intergenic
CTTCGCAGGAACTTTGGTTA+GGG 0.460318 5_2:-39399297 Msa0769830:intron
TGCTCGGAAGATGTCAGGAT+TGG 0.472168 5_2:-39401529 Msa0769830:CDS
TCCAGTTCTTGTTATCAGAA+TGG 0.481036 5_2:+39391685 None:intergenic
GTGCTTCCCATTGAAAGAAT+AGG 0.481596 5_2:+39391782 None:intergenic
CACGTTACTCTACTCACTGT+TGG 0.481690 5_2:-39398516 Msa0769830:CDS
CACCAGCATCAATTATCATC+TGG 0.488043 5_2:+39396856 None:intergenic
GCCATGGGATACCTGATTCA+CGG 0.494701 5_2:-39396764 Msa0769830:CDS
TATCTGGAGAATGGATTGGT+AGG 0.497784 5_2:-39391389 Msa0769830:three_prime_UTR
TCGGAAGATGTCAGGATTGG+AGG 0.503158 5_2:-39401526 Msa0769830:CDS
TGAACTTCAGGTTGTGAAGA+AGG 0.505374 5_2:-39399507 Msa0769830:CDS
GTATGCTCAAACTGTGCGGC+TGG 0.509061 5_2:+39391707 None:intergenic
TCAGATGTACTTCCAGAAAT+GGG 0.509891 5_2:-39399398 Msa0769830:CDS
ATACTAAAGCCTCCTTATGT+AGG 0.510983 5_2:-39399422 Msa0769830:CDS
CTGAAGGTATAGCTAAAATG+AGG 0.514873 5_2:-39399352 Msa0769830:CDS
ATAGGTAACCGAAGAGTGCT+TGG 0.515902 5_2:-39395505 Msa0769830:intron
ATCTGGAGAATGGATTGGTA+GGG 0.527492 5_2:-39391388 Msa0769830:three_prime_UTR
AATCATACGTGCTCTTGTAC+CGG 0.530121 5_2:+39397851 None:intergenic
ATAGCTAAAATGAGGGCTGC+AGG 0.530647 5_2:-39399344 Msa0769830:CDS
AGTGAAGGTCGAAACGAAAA+GGG 0.532061 5_2:-39398561 Msa0769830:CDS
GAAGGAGGTTGCATGGTTGA+AGG 0.534832 5_2:-39392222 Msa0769830:CDS
GTGGTAGAAATTGAAGAAGA+AGG 0.536961 5_2:+39401713 None:intergenic
GCACGTGTCTTGAACTTCGC+AGG 0.540825 5_2:-39399311 Msa0769830:CDS
ACCGAAGAGTGCTTGGAGAA+AGG 0.543493 5_2:-39395498 Msa0769830:CDS
AGTACATCTGAGCCTACATA+AGG 0.545561 5_2:+39399410 None:intergenic
AGGGGTACCATCTTTGCAAA+CGG 0.547784 5_2:+39395470 None:intergenic
CTCCAGATAGTCATCTCAGC+AGG 0.549313 5_2:+39391403 None:intergenic
TGACTATCTGGAGAATGGAT+TGG 0.550393 5_2:-39391393 Msa0769830:three_prime_UTR
ATTTCATTAGTTGTTACAGA+AGG 0.554257 5_2:+39396894 None:intergenic
TGAAAGGTAACTCACGATGA+TGG 0.557241 5_2:+39392607 None:intergenic
CCTTCTGGAGGATCATGCAC+AGG 0.558467 5_2:-39391532 Msa0769830:three_prime_UTR
CCACCATAACCAAGGGGTGA+GGG 0.564039 5_2:+39396828 None:intergenic
TATCAAATTCATGATTCTGA+AGG 0.565467 5_2:-39399368 Msa0769830:CDS
CGGAAATCCACCATAACCAA+GGG 0.568072 5_2:+39396821 None:intergenic
TGAGATGACTATCTGGAGAA+TGG 0.569439 5_2:-39391398 Msa0769830:three_prime_UTR
TCCACCATAACCAAGGGGTG+AGG 0.570980 5_2:+39396827 None:intergenic
AAAGTATGGCTACGGTGTAG+TGG 0.575901 5_2:-39392685 Msa0769830:CDS
ATGGCGCTCACTGCTTCACT+CGG 0.577075 5_2:-39401785 Msa0769830:CDS
TTTAGTATATCATCAGGGAC+AGG 0.579400 5_2:+39399437 None:intergenic
TGGACAACAGTTACAACTGA+TGG 0.581338 5_2:-39391734 Msa0769830:CDS
GGCTAGCCACTGTTCTGTAT+CGG 0.581840 5_2:+39397959 None:intergenic
GTTGTGAAGAAGGATAGAAA+AGG 0.584695 5_2:-39399497 Msa0769830:CDS
TTGTGAAGAAGGATAGAAAA+GGG 0.586969 5_2:-39399496 Msa0769830:CDS
TGATAAATGCACAAACAAGT+AGG 0.593453 5_2:+39391364 None:intergenic
GTTAATGAGTGCATGTGCCA+TGG 0.601267 5_2:-39396780 Msa0769830:CDS
CATGCCGAAAAGTATGGCTA+CGG 0.602255 5_2:-39392693 Msa0769830:CDS
AGTTTACCCAAATTTATCTG+AGG 0.605591 5_2:-39398262 Msa0769830:CDS
AATTAACAAACCGGGAAACG+TGG 0.607568 5_2:+39401694 None:intergenic
CAATGACGAAGGAGGTTGCA+TGG 0.610246 5_2:-39392229 Msa0769830:CDS
TCTGGAGAATGGATTGGTAG+GGG 0.611009 5_2:-39391387 Msa0769830:three_prime_UTR
CACCAGATGATAATTGATGC+TGG 0.614026 5_2:-39396858 Msa0769830:CDS
GAAGATGTCAGGATTGGAGG+AGG 0.614618 5_2:-39401523 Msa0769830:CDS
CAGCAGCAAGTTCTAAGTGA+AGG 0.621176 5_2:-39398576 Msa0769830:CDS
GCCGTGAATCAGGTATCCCA+TGG 0.621584 5_2:+39396763 None:intergenic
AGTGAAGACTCTTATCCAGA+GGG 0.621826 5_2:-39391427 Msa0769830:three_prime_UTR
TTAATGAGTGCATGTGCCAT+GGG 0.622408 5_2:-39396779 Msa0769830:CDS
GAAGCACTGATTGCATTACA+TGG 0.627144 5_2:-39391766 Msa0769830:CDS
TCGGAAATCCACCATAACCA+AGG 0.629493 5_2:+39396820 None:intergenic
AGTAGAGAGTTTCAGAAATG+CGG 0.629669 5_2:+39401757 None:intergenic
CCTGTGCATGATCCTCCAGA+AGG 0.629941 5_2:+39391532 None:intergenic
AGCATCGATGCATGAAGAGG+TGG 0.633907 5_2:+39397938 None:intergenic
ACGTAAGACACATCAACCAT+TGG 0.635228 5_2:-39391169 Msa0769830:three_prime_UTR
TTGATAGGCAATGACGAAGG+AGG 0.640673 5_2:-39392237 Msa0769830:intron
ACATCTGAGCCTACATAAGG+AGG 0.644417 5_2:+39399413 None:intergenic
TAGTGAAGACTCTTATCCAG+AGG 0.648786 5_2:-39391428 Msa0769830:three_prime_UTR
AAAGGGCCTCCATTAAGGCG+TGG 0.649969 5_2:-39399479 Msa0769830:CDS
GAGGCTTTAGTATATCATCA+GGG 0.660911 5_2:+39399432 None:intergenic
TGAAGGTATAGCTAAAATGA+GGG 0.663053 5_2:-39399351 Msa0769830:CDS
GCGATTTGTAGGTGCAAACG+CGG 0.673559 5_2:+39397896 None:intergenic
TGCAGCATCGATGCATGAAG+AGG 0.685520 5_2:+39397935 None:intergenic
AGGAGGCCAGAAGAATCAAG+AGG 0.691066 5_2:-39401506 Msa0769830:intron
TGCTTGATAGGCAATGACGA+AGG 0.699722 5_2:-39392240 Msa0769830:intron
TCATCAGGGACAGGTAGACG+TGG 0.713408 5_2:+39399446 None:intergenic
AATGGTATGCTCAAACTGTG+CGG 0.737234 5_2:+39391703 None:intergenic
GTGAAGACTCTTATCCAGAG+GGG 0.740460 5_2:-39391426 Msa0769830:three_prime_UTR
AACATGCCGATACAGAACAG+TGG 0.742758 5_2:-39397965 Msa0769830:CDS
GGAAATCCACCATAACCAAG+GGG 0.749657 5_2:+39396822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAATATAAATTAT+AGG - chr5_2:39398166-39398185 Msa0769830:intron 0.0%
!!! TTTTCTATTTTAATTCTTAT+AGG - chr5_2:39391324-39391343 Msa0769830:three_prime_UTR 10.0%
!!! GTTTTAAAAAAAAATTACAA+GGG - chr5_2:39391692-39391711 Msa0769830:CDS 10.0%
!!! TTTATTTAAAAGTATAAAGA+TGG - chr5_2:39393330-39393349 Msa0769830:intron 10.0%
!! ACATAATCTAAAAAAAAATT+AGG + chr5_2:39397981-39398000 None:intergenic 10.0%
!! TAAAATATAAATTATAGGAA+CGG - chr5_2:39398171-39398190 Msa0769830:intron 10.0%
!!! TATATATTTTTTTTTGCTTT+TGG - chr5_2:39399673-39399692 Msa0769830:intron 10.0%
!!! CGTTTTAAAAAAAAATTACA+AGG - chr5_2:39391691-39391710 Msa0769830:CDS 15.0%
!! ATGACATGTTAAAATAAATA+AGG - chr5_2:39391742-39391761 Msa0769830:CDS 15.0%
!!! TTGGAATTTATGTTTTTTAT+GGG + chr5_2:39392277-39392296 None:intergenic 15.0%
!!! TTTTCTTTTTATTTTGTTGA+GGG + chr5_2:39392841-39392860 None:intergenic 15.0%
!!! ATTTTCTTTTTATTTTGTTG+AGG + chr5_2:39392842-39392861 None:intergenic 15.0%
!!! TATATTTAGATCATTTTCTA+TGG + chr5_2:39393823-39393842 None:intergenic 15.0%
!! TAAATAAAGTAAAAGTTGTT+TGG + chr5_2:39393846-39393865 None:intergenic 15.0%
!! AATCAAATAACATATAATCA+AGG + chr5_2:39395908-39395927 None:intergenic 15.0%
!! TAATTTGATTCTGATATTAT+GGG + chr5_2:39396485-39396504 None:intergenic 15.0%
!!! TTAATTTGATTCTGATATTA+TGG + chr5_2:39396486-39396505 None:intergenic 15.0%
!!! TTTTTCCAATTTTCTTAAAA+GGG + chr5_2:39397464-39397483 None:intergenic 15.0%
!! TACAAAATTTACAAACATAA+AGG + chr5_2:39397525-39397544 None:intergenic 15.0%
!! CAATTATACAAACTTATAAA+AGG + chr5_2:39400095-39400114 None:intergenic 15.0%
!! AAGAAAAATAACTTAGTTAA+AGG - chr5_2:39401570-39401589 Msa0769830:intron 15.0%
!!! TATATTATATCTTTTGGAAA+TGG - chr5_2:39401608-39401627 Msa0769830:intron 15.0%
!!! ATATTATATCTTTTGGAAAT+GGG - chr5_2:39401609-39401628 Msa0769830:intron 15.0%
!!! ACCATTTTTTTTTTTTTGTA+GGG + chr5_2:39401779-39401798 None:intergenic 15.0%
!!! AACCATTTTTTTTTTTTTGT+AGG + chr5_2:39401780-39401799 None:intergenic 15.0%
!! TAAATAAAATGAGTACAACA+TGG - chr5_2:39391289-39391308 Msa0769830:three_prime_UTR 20.0%
!!! ATTGTTTTCTTGAAAATGAT+TGG + chr5_2:39391353-39391372 None:intergenic 20.0%
!!! ATTTTCAAGAAAACAATTTG+TGG - chr5_2:39391356-39391375 Msa0769830:three_prime_UTR 20.0%
!! TAAAACAATAGGGTTATTAT+TGG + chr5_2:39391435-39391454 None:intergenic 20.0%
!! TAGAACAGTATAAAACAATA+GGG + chr5_2:39391445-39391464 None:intergenic 20.0%
!!! GTTGGAATTTATGTTTTTTA+TGG + chr5_2:39392278-39392297 None:intergenic 20.0%
!!! TTTTAGTATTTGTATGTTGT+TGG + chr5_2:39392296-39392315 None:intergenic 20.0%
!! TACAATATTAGGTCATTTAA+TGG - chr5_2:39392796-39392815 Msa0769830:intron 20.0%
!! ACAATATTAGGTCATTTAAT+GGG - chr5_2:39392797-39392816 Msa0769830:intron 20.0%
!! TCTTATTATCATTTAGATCT+TGG - chr5_2:39393161-39393180 Msa0769830:intron 20.0%
!! GAAAGAATATATATGAGAAA+GGG + chr5_2:39393219-39393238 None:intergenic 20.0%
!!! AGAAAGTATTGAAATTGTTT+AGG + chr5_2:39393241-39393260 None:intergenic 20.0%
!! AATGTATGTATGTCATTAAT+AGG + chr5_2:39394000-39394019 None:intergenic 20.0%
!! AAAGGAAGTTTCATATTAAA+TGG - chr5_2:39394195-39394214 Msa0769830:intron 20.0%
!! GCACAAAATAAAATGTTAAA+TGG - chr5_2:39394257-39394276 Msa0769830:intron 20.0%
!!! TCAATTATAAGGGAATTTTA+GGG + chr5_2:39395168-39395187 None:intergenic 20.0%
!!! TTCAATTATAAGGGAATTTT+AGG + chr5_2:39395169-39395188 None:intergenic 20.0%
!! TATCAATTTAGTGAATCTAA+TGG + chr5_2:39395537-39395556 None:intergenic 20.0%
!! TGAGAAGAATAAATTAAACT+TGG + chr5_2:39395576-39395595 None:intergenic 20.0%
!! ATAACATATAATCAAGGTTA+CGG + chr5_2:39395902-39395921 None:intergenic 20.0%
!!! TACAAATTACAGCAATATTT+TGG - chr5_2:39396381-39396400 Msa0769830:intron 20.0%
!! AATTCTAAGTAACTATACTA+AGG + chr5_2:39396603-39396622 None:intergenic 20.0%
!!! AATAATTTTTGAGAGAAACA+TGG + chr5_2:39396831-39396850 None:intergenic 20.0%
!!! ATTTTGTTATCTGTTATCAA+TGG - chr5_2:39396848-39396867 Msa0769830:CDS 20.0%
!!! TTTTCCAATTTTCTTAAAAG+GGG + chr5_2:39397463-39397482 None:intergenic 20.0%
!!! CTTTTTCCAATTTTCTTAAA+AGG + chr5_2:39397465-39397484 None:intergenic 20.0%
!! ATCTTCATTTCATTTATTGT+TGG + chr5_2:39397617-39397636 None:intergenic 20.0%
!! ATTGGTATAACAAGTTATAT+AGG + chr5_2:39398492-39398511 None:intergenic 20.0%
!! TAGATATATTGTTATCTGTT+AGG - chr5_2:39398557-39398576 Msa0769830:CDS 20.0%
!!! TTTTTTTGTACTTTTTAGCT+GGG + chr5_2:39399279-39399298 None:intergenic 20.0%
!! TAAAAATGAACAAATTTACG+TGG + chr5_2:39399701-39399720 None:intergenic 20.0%
!! AGTGTTTAACTGTTAATTTA+AGG + chr5_2:39399829-39399848 None:intergenic 20.0%
!! AATGAATTATACAAGATGAA+AGG + chr5_2:39400324-39400343 None:intergenic 20.0%
!! ATTATTTATGCGTTATTTAC+CGG - chr5_2:39400449-39400468 Msa0769830:intron 20.0%
!!! TTGAATACTTTTCAAAAATG+AGG + chr5_2:39400885-39400904 None:intergenic 20.0%
!!! TCATTTTTGAAAAGTATTCA+AGG - chr5_2:39400884-39400903 Msa0769830:intron 20.0%
!!! AATTTACTTTTCAGTCATTT+AGG - chr5_2:39401008-39401027 Msa0769830:intron 20.0%
!!! TATTGTAGAATCGTTTTTTT+GGG - chr5_2:39401679-39401698 Msa0769830:intron 20.0%
!!! ATTTTTTTTTTTTTGTAGGG+GGG + chr5_2:39401776-39401795 None:intergenic 20.0%
!!! CATTTTTTTTTTTTTGTAGG+GGG + chr5_2:39401777-39401796 None:intergenic 20.0%
!!! CCATTTTTTTTTTTTTGTAG+GGG + chr5_2:39401778-39401797 None:intergenic 20.0%
!! ATGAATAACACTTTGAAAAC+CGG + chr5_2:39391244-39391263 None:intergenic 25.0%
! CTAGAACAGTATAAAACAAT+AGG + chr5_2:39391446-39391465 None:intergenic 25.0%
!!! ATTGTTTTATACTGTTCTAG+TGG - chr5_2:39391446-39391465 Msa0769830:three_prime_UTR 25.0%
!! TGTTATACTTTGATAGTTCA+AGG + chr5_2:39391648-39391667 None:intergenic 25.0%
! TTATGAGAATCATAGATAAG+TGG - chr5_2:39391770-39391789 Msa0769830:CDS 25.0%
! ATTTAGATATATGTACTTGC+AGG - chr5_2:39392097-39392116 Msa0769830:intron 25.0%
! TTTACAACATGGATAAGTAT+TGG + chr5_2:39392169-39392188 None:intergenic 25.0%
!! TATACTGCAATAGCATTTTT+GGG + chr5_2:39392210-39392229 None:intergenic 25.0%
!!! ATTTATGTTTTTTATGGGCA+TGG + chr5_2:39392272-39392291 None:intergenic 25.0%
! TAACTAGAGCTTATATTGAT+GGG + chr5_2:39392375-39392394 None:intergenic 25.0%
! TTAACTAGAGCTTATATTGA+TGG + chr5_2:39392376-39392395 None:intergenic 25.0%
!!! CTTTTAGAACTTGATTTTGA+TGG + chr5_2:39392447-39392466 None:intergenic 25.0%
!! ACATTGTTGGTTACAATATT+AGG - chr5_2:39392785-39392804 Msa0769830:intron 25.0%
!!! TTATTTTGTTGAGGGTATAT+TGG + chr5_2:39392833-39392852 None:intergenic 25.0%
! GGAAAGAATATATATGAGAA+AGG + chr5_2:39393220-39393239 None:intergenic 25.0%
! TATCAAATTCATGATTCTGA+AGG - chr5_2:39393544-39393563 Msa0769830:intron 25.0%
!! GCTGAGTTATATTTTGTTAA+TGG + chr5_2:39394031-39394050 None:intergenic 25.0%
! CTGGATGAATATAATTGTAA+AGG - chr5_2:39394177-39394196 Msa0769830:intron 25.0%
! ATTACGAAATGAGGATTATA+GGG + chr5_2:39395101-39395120 None:intergenic 25.0%
! AATTACGAAATGAGGATTAT+AGG + chr5_2:39395102-39395121 None:intergenic 25.0%
! TATAATCCTCATTTCGTAAT+TGG - chr5_2:39395101-39395120 Msa0769830:intron 25.0%
!! CAATTATAAGGGAATTTTAG+GGG + chr5_2:39395167-39395186 None:intergenic 25.0%
! ATGTAAGCGTTCAATTATAA+GGG + chr5_2:39395178-39395197 None:intergenic 25.0%
! TTATAATTGAACGCTTACAT+GGG - chr5_2:39395178-39395197 Msa0769830:intron 25.0%
! ATTGATATTCTATGAGAGTT+TGG - chr5_2:39395550-39395569 Msa0769830:intron 25.0%
!! ACTCAAATAAAAGCATGTTA+TGG + chr5_2:39395696-39395715 None:intergenic 25.0%
!!! AACATGCTTTTATTTGAGTA+TGG - chr5_2:39395697-39395716 Msa0769830:intron 25.0%
!!! ACATGCTTTTATTTGAGTAT+GGG - chr5_2:39395698-39395717 Msa0769830:intron 25.0%
! CAAACATAAAGTTTAGCATT+TGG + chr5_2:39395933-39395952 None:intergenic 25.0%
!! GCTAAACTTTATGTTTGTTT+TGG - chr5_2:39395936-39395955 Msa0769830:intron 25.0%
!!! TTTTGGAATGATAACTTACT+TGG - chr5_2:39395953-39395972 Msa0769830:intron 25.0%
! ATTTCATTAGTTGTTACAGA+AGG + chr5_2:39396021-39396040 None:intergenic 25.0%
! TGAGTTATATGCATTTACAA+GGG + chr5_2:39396215-39396234 None:intergenic 25.0%
! ATGAGTTATATGCATTTACA+AGG + chr5_2:39396216-39396235 None:intergenic 25.0%
! GAAATTTAGGTATGAAAGTA+TGG + chr5_2:39396541-39396560 None:intergenic 25.0%
! GCATTGTATTACAAAGATAA+AGG + chr5_2:39396708-39396727 None:intergenic 25.0%
! TCATGCATATTATATTTGAC+TGG - chr5_2:39396893-39396912 Msa0769830:CDS 25.0%
! CATGCATATTATATTTGACT+GGG - chr5_2:39396894-39396913 Msa0769830:CDS 25.0%
! GTTTGAAAAAATAACTACCA+TGG + chr5_2:39396934-39396953 None:intergenic 25.0%
! TTGAACAAGTCAAAAATAGA+AGG + chr5_2:39396970-39396989 None:intergenic 25.0%
! ACCTGTGTATAATGAATTAT+TGG - chr5_2:39397004-39397023 Msa0769830:intron 25.0%
!!! GACTATTTTTTACCTTAACA+AGG + chr5_2:39397189-39397208 None:intergenic 25.0%
! ATATTGTTTATCCTGTTGAT+AGG - chr5_2:39397389-39397408 Msa0769830:intron 25.0%
! AGAAAATTGGAAAAAGAATC+AGG - chr5_2:39397469-39397488 Msa0769830:intron 25.0%
!!! AGTTTTAGTTCCCTTTAATT+TGG - chr5_2:39397574-39397593 Msa0769830:intron 25.0%
!!! GCTTGTTATTCCAAATTAAA+GGG + chr5_2:39397587-39397606 None:intergenic 25.0%
!!! AGCTTGTTATTCCAAATTAA+AGG + chr5_2:39397588-39397607 None:intergenic 25.0%
! ATACAACAAAAATGACTGTT+TGG + chr5_2:39397687-39397706 None:intergenic 25.0%
!!! ACAGTCATTTTTGTTGTATT+TGG - chr5_2:39397688-39397707 Msa0769830:intron 25.0%
! ACTAGTTATAAACTCATTTC+AGG + chr5_2:39397808-39397827 None:intergenic 25.0%
! TGAAATGAGTTTATAACTAG+TGG - chr5_2:39397807-39397826 Msa0769830:intron 25.0%
! GAAATTGGAAACTGAAAAAT+AGG + chr5_2:39398279-39398298 None:intergenic 25.0%
!! TGCATGCATAATTTTTCTAT+AGG - chr5_2:39398302-39398321 Msa0769830:intron 25.0%
! GATATAATATCTCAAGGTAT+TGG + chr5_2:39398510-39398529 None:intergenic 25.0%
! TACCTTGAGATATTATATCT+AGG - chr5_2:39398511-39398530 Msa0769830:CDS 25.0%
! TACCTAGATATAATATCTCA+AGG + chr5_2:39398516-39398535 None:intergenic 25.0%
! AACTGAATATGAAGCAAAAT+AGG - chr5_2:39398851-39398870 Msa0769830:intron 25.0%
! CTTGGATTTATTTAAATGCT+GGG + chr5_2:39398914-39398933 None:intergenic 25.0%
! ACTTGGATTTATTTAAATGC+TGG + chr5_2:39398915-39398934 None:intergenic 25.0%
! TCATCATGTTAAAGCTATAT+CGG - chr5_2:39398963-39398982 Msa0769830:intron 25.0%
!!! TTTTTAGAGAAGAAAAACAG+AGG - chr5_2:39399186-39399205 Msa0769830:intron 25.0%
!!! CTTTTTTTGTACTTTTTAGC+TGG + chr5_2:39399280-39399299 None:intergenic 25.0%
!! CAGCTAAAAAGTACAAAAAA+AGG - chr5_2:39399278-39399297 Msa0769830:intron 25.0%
!!! AGATTAAGGTTTTGAGAATT+AGG + chr5_2:39399544-39399563 None:intergenic 25.0%
! ATCACTACAAAATATACATG+GGG + chr5_2:39399601-39399620 None:intergenic 25.0%
! CATCACTACAAAATATACAT+GGG + chr5_2:39399602-39399621 None:intergenic 25.0%
! TCATCACTACAAAATATACA+TGG + chr5_2:39399603-39399622 None:intergenic 25.0%
!!! GCTTTAATTTTGAGTTATAG+TGG - chr5_2:39400053-39400072 Msa0769830:intron 25.0%
! ATGATGAGATCTACAATTAA+TGG - chr5_2:39400145-39400164 Msa0769830:intron 25.0%
! CTTAAGATAGAAATAGCAAT+AGG + chr5_2:39400350-39400369 None:intergenic 25.0%
! TAACGCATAAATAATCAGTT+AGG + chr5_2:39400444-39400463 None:intergenic 25.0%
! ATTCTTGAATTGTGCTAATT+AGG + chr5_2:39400621-39400640 None:intergenic 25.0%
!! TGAAAAGTTAGAAGTATGTT+CGG + chr5_2:39400648-39400667 None:intergenic 25.0%
! AAACATTTACAATTGGTAAG+TGG - chr5_2:39400715-39400734 Msa0769830:intron 25.0%
! AGATATTTACCAAATATTCG+AGG - chr5_2:39400743-39400762 Msa0769830:intron 25.0%
!! ACTAACTTTGAAAATCCATT+TGG + chr5_2:39400969-39400988 None:intergenic 25.0%
!!! GTATTGTAGAATCGTTTTTT+TGG - chr5_2:39401678-39401697 Msa0769830:intron 25.0%
!!! ATTGTAGAATCGTTTTTTTG+GGG - chr5_2:39401680-39401699 Msa0769830:intron 25.0%
! CCCCTACAAAAAAAAAAAAA+TGG - chr5_2:39401775-39401794 Msa0769830:CDS 25.0%
! AAAAAATGGTTGATCAACAT+TGG - chr5_2:39401789-39401808 Msa0769830:exon 25.0%
! AAACTCTCTACTTCCTTTTA+TGG - chr5_2:39391166-39391185 Msa0769830:three_prime_UTR 30.0%
! AACAATTTGTGGTTTTTGCT+CGG - chr5_2:39391367-39391386 Msa0769830:three_prime_UTR 30.0%
! AGTATAACTTCGATTCGATT+TGG - chr5_2:39391486-39391505 Msa0769830:three_prime_UTR 30.0%
AAAACGTCACCTTAAGTTTA+GGG + chr5_2:39391677-39391696 None:intergenic 30.0%
TAAAACGTCACCTTAAGTTT+AGG + chr5_2:39391678-39391697 None:intergenic 30.0%
! GAATCATAGATAAGTGGATT+CGG - chr5_2:39391776-39391795 Msa0769830:CDS 30.0%
TTGTTAAATAGCAGCTATAG+TGG - chr5_2:39391831-39391850 Msa0769830:intron 30.0%
TAAATTCTGATACGCTATAG+CGG + chr5_2:39391864-39391883 None:intergenic 30.0%
TAATTACAAACGTGATCAAC+AGG + chr5_2:39392041-39392060 None:intergenic 30.0%
GTATACCCTACTTGAATTAA+AGG + chr5_2:39392126-39392145 None:intergenic 30.0%
ATGTTGTAAATCTCAGATTG+CGG - chr5_2:39392179-39392198 Msa0769830:intron 30.0%
! CTATACTGCAATAGCATTTT+TGG + chr5_2:39392211-39392230 None:intergenic 30.0%
AAAATGCTATTGCAGTATAG+TGG - chr5_2:39392211-39392230 Msa0769830:CDS 30.0%
!!! TTTTTTAGTCTTCACAGTAG+CGG + chr5_2:39392249-39392268 None:intergenic 30.0%
! TTGCTTTCTTCTTTTCTTGA+TGG + chr5_2:39392486-39392505 None:intergenic 30.0%
!!! TGTTTGTGTTTTGTTTTCTG+AGG + chr5_2:39392558-39392577 None:intergenic 30.0%
AAGAAAAGAAGAACGAAAAG+AGG - chr5_2:39392744-39392763 Msa0769830:intron 30.0%
AATGTTTGATTCTCCAATTG+TGG + chr5_2:39392770-39392789 None:intergenic 30.0%
ATTGGAGAATCAAACATTGT+TGG - chr5_2:39392772-39392791 Msa0769830:intron 30.0%
ACATTAGGAGAAAAGAAATG+TGG + chr5_2:39393122-39393141 None:intergenic 30.0%
AAAAAGATGCAAAGCACATT+AGG + chr5_2:39393137-39393156 None:intergenic 30.0%
! TAATGTGCTTTGCATCTTTT+TGG - chr5_2:39393136-39393155 Msa0769830:intron 30.0%
TTGTGAAGAAGGATAGAAAA+GGG - chr5_2:39393416-39393435 Msa0769830:intron 30.0%
! TGAAGGTATAGCTAAAATGA+GGG - chr5_2:39393561-39393580 Msa0769830:intron 30.0%
GAGTTTAAAAGTCAAGTCTA+TGG + chr5_2:39393936-39393955 None:intergenic 30.0%
! GTCATATTAAGTTGTGAAAC+TGG - chr5_2:39394158-39394177 Msa0769830:intron 30.0%
TCTGAATCTCTAATCACTAT+TGG + chr5_2:39394295-39394314 None:intergenic 30.0%
! AAAGGAGAGGTTTTTCTTAA+AGG - chr5_2:39394445-39394464 Msa0769830:intron 30.0%
! AAGGAGAGGTTTTTCTTAAA+GGG - chr5_2:39394446-39394465 Msa0769830:intron 30.0%
!!! ACTTTAGAAGTTGTCGTTTT+AGG - chr5_2:39394584-39394603 Msa0769830:intron 30.0%
TGAGTACTATGGTAAGAAAA+AGG + chr5_2:39394610-39394629 None:intergenic 30.0%
AGTTTACCCAAATTTATCTG+AGG - chr5_2:39394650-39394669 Msa0769830:intron 30.0%
CATTTAAGCATGACTATGTA+AGG + chr5_2:39394864-39394883 None:intergenic 30.0%
GTCATGCTTAAATGTAAACA+AGG - chr5_2:39394870-39394889 Msa0769830:intron 30.0%
!! GTATTTACTGATTGGTTTAC+CGG - chr5_2:39395042-39395061 Msa0769830:intron 30.0%
CATGTAAGCGTTCAATTATA+AGG + chr5_2:39395179-39395198 None:intergenic 30.0%
CTTATAATTGAACGCTTACA+TGG - chr5_2:39395177-39395196 Msa0769830:intron 30.0%
GATAAATGAAAAGAGAGAAC+GGG + chr5_2:39395264-39395283 None:intergenic 30.0%
GGATAAATGAAAAGAGAGAA+CGG + chr5_2:39395265-39395284 None:intergenic 30.0%
AAAGATGGTAAGATACATGT+TGG + chr5_2:39395353-39395372 None:intergenic 30.0%
! TTTTCGAATGTGAAGAAAGA+TGG + chr5_2:39395368-39395387 None:intergenic 30.0%
ATGTAGTCAATCCTAGTTTA+AGG + chr5_2:39395470-39395489 None:intergenic 30.0%
TAAACTAGGATTGACTACAT+AGG - chr5_2:39395470-39395489 Msa0769830:CDS 30.0%
!! ATGTTCAGAAGTTGTCATTT+TGG - chr5_2:39395497-39395516 Msa0769830:CDS 30.0%
!!! TGTTCAGAAGTTGTCATTTT+GGG - chr5_2:39395498-39395517 Msa0769830:CDS 30.0%
TTTAGTGAATCTAATGGTGT+AGG + chr5_2:39395531-39395550 None:intergenic 30.0%
! GTTAATTAGATTTTGCTTGC+TGG - chr5_2:39395623-39395642 Msa0769830:intron 30.0%
!! CATGCTTTTATTTGAGTATG+GGG - chr5_2:39395699-39395718 Msa0769830:intron 30.0%
AGAAAATCAATGCATCATAC+AGG + chr5_2:39395770-39395789 None:intergenic 30.0%
!!! CATTGATTTTCTTACGTACA+CGG - chr5_2:39395778-39395797 Msa0769830:CDS 30.0%
! TATATGCATCTTTTGCAGAA+TGG - chr5_2:39396249-39396268 Msa0769830:intron 30.0%
! GTAATTTGTACAAAACATCC+AGG + chr5_2:39396371-39396390 None:intergenic 30.0%
!! TTTTCCACTGATTATTCACA+AGG - chr5_2:39396417-39396436 Msa0769830:intron 30.0%
! TTTCCACTGATTATTCACAA+GGG - chr5_2:39396418-39396437 Msa0769830:intron 30.0%
TTATTCACAAGGGATTTACT+AGG - chr5_2:39396428-39396447 Msa0769830:intron 30.0%
ATCAGAATCAAATTAAGCCT+AGG - chr5_2:39396490-39396509 Msa0769830:intron 30.0%
TGTCAATGAGGATGAAATTT+AGG + chr5_2:39396554-39396573 None:intergenic 30.0%
AACTATACTAAGGAACTAAC+AGG + chr5_2:39396593-39396612 None:intergenic 30.0%
GAGTAGGATATAATTAAGAG+AGG - chr5_2:39396677-39396696 Msa0769830:intron 30.0%
ATACACAGGTGAAAACTAAT+AGG + chr5_2:39396994-39397013 None:intergenic 30.0%
GCCAATAATTCATTATACAC+AGG + chr5_2:39397008-39397027 None:intergenic 30.0%
TGTCATAAAGCACAGAATAT+TGG + chr5_2:39397044-39397063 None:intergenic 30.0%
CATTTAGTGGTTTAATGTTG+AGG - chr5_2:39397062-39397081 Msa0769830:intron 30.0%
!!! ACGTCAAAGACTTTTTTTTG+TGG - chr5_2:39397139-39397158 Msa0769830:intron 30.0%
!!! CGTCAAAGACTTTTTTTTGT+GGG - chr5_2:39397140-39397159 Msa0769830:intron 30.0%
!!! GTCAAAGACTTTTTTTTGTG+GGG - chr5_2:39397141-39397160 Msa0769830:intron 30.0%
TGCAATGAAAAACCTTGTTA+AGG - chr5_2:39397174-39397193 Msa0769830:intron 30.0%
AGGAATTGAATTTCGTGTAT+GGG + chr5_2:39397323-39397342 None:intergenic 30.0%
TCCCACAATAGATTAAGATA+AGG - chr5_2:39397782-39397801 Msa0769830:intron 30.0%
GCCTTATCTTAATCTATTGT+GGG + chr5_2:39397786-39397805 None:intergenic 30.0%
TTTGGATACTCCTAGAATTT+GGG + chr5_2:39397880-39397899 None:intergenic 30.0%
ACAATAAACTCAACCTTGTT+TGG + chr5_2:39397898-39397917 None:intergenic 30.0%
!!! TTTTGAGATAATGACGCTTT+TGG - chr5_2:39397924-39397943 Msa0769830:CDS 30.0%
! TGGAGGAATCTAAAATATCA+GGG + chr5_2:39398004-39398023 None:intergenic 30.0%
! ATGGAGGAATCTAAAATATC+AGG + chr5_2:39398005-39398024 None:intergenic 30.0%
GGAAAATGTGTAGTAGAAAA+TGG - chr5_2:39398047-39398066 Msa0769830:intron 30.0%
AAATGTGTAGTAGAAAATGG+AGG - chr5_2:39398050-39398069 Msa0769830:intron 30.0%
ATTATGCATGCAGTAGAAAT+TGG + chr5_2:39398294-39398313 None:intergenic 30.0%
!! GTTATATAGGTCTACTTTTC+TGG + chr5_2:39398479-39398498 None:intergenic 30.0%
ATGCAATTTAACGAATCACT+TGG + chr5_2:39398932-39398951 None:intergenic 30.0%
CATCATGTTAAAGCTATATC+GGG - chr5_2:39398964-39398983 Msa0769830:intron 30.0%
AAAACAGGGGAAATAAATAG+TGG - chr5_2:39399078-39399097 Msa0769830:intron 30.0%
! GAAATAAATAGTGGTGGAAA+AGG - chr5_2:39399087-39399106 Msa0769830:intron 30.0%
!! GGGTTATTTCAAATGCTTTT+TGG + chr5_2:39399312-39399331 None:intergenic 30.0%
!! ACTCAGCTTTTAACTGTTTA+GGG + chr5_2:39399332-39399351 None:intergenic 30.0%
TAACTACATAACATGTGCTA+CGG - chr5_2:39399367-39399386 Msa0769830:CDS 30.0%
! AGTGATGATACTTTTATGCA+TGG - chr5_2:39399615-39399634 Msa0769830:intron 30.0%
! TTGACACAGTTTTCTTCTTA+CGG - chr5_2:39400016-39400035 Msa0769830:intron 30.0%
! TCACGATGATGGTAAATATA+TGG + chr5_2:39400297-39400316 None:intergenic 30.0%
!! GTTTAACAGGTTTGTTAGTT+TGG + chr5_2:39400375-39400394 None:intergenic 30.0%
CAAGATATTTGCAGTTTAAC+AGG + chr5_2:39400388-39400407 None:intergenic 30.0%
CTGTTAAACTGCAAATATCT+TGG - chr5_2:39400386-39400405 Msa0769830:intron 30.0%
! GAATTTGAAAGCGCAAATTA+AGG + chr5_2:39400496-39400515 None:intergenic 30.0%
! ACTTTTCATCATTGCTTGAT+AGG - chr5_2:39400660-39400679 Msa0769830:intron 30.0%
GAAGGTCAAACATTTACAAT+TGG - chr5_2:39400708-39400727 Msa0769830:intron 30.0%
TGAAACGCTAAACACATTAT+GGG + chr5_2:39400854-39400873 None:intergenic 30.0%
TTGAAACGCTAAACACATTA+TGG + chr5_2:39400855-39400874 None:intergenic 30.0%
TGGTAAGTTTCTGTTCATAT+TGG - chr5_2:39400914-39400933 Msa0769830:intron 30.0%
TAGGATATCACAAAACCAAA+TGG - chr5_2:39400951-39400970 Msa0769830:intron 30.0%
! TTCAAAGTTAGTCTATGAGT+AGG - chr5_2:39400977-39400996 Msa0769830:intron 30.0%
!!! ATTTTGACTACATGTTGATG+TGG - chr5_2:39401256-39401275 Msa0769830:intron 30.0%
TGATAAATGCACAAACAAGT+AGG + chr5_2:39401551-39401570 None:intergenic 30.0%
!!! TTGTAGAATCGTTTTTTTGG+GGG - chr5_2:39401681-39401700 Msa0769830:intron 30.0%
AGTAGAGAGTTTCAGAAATG+CGG + chr5_2:39391158-39391177 None:intergenic 35.0%
GTGGTAGAAATTGAAGAAGA+AGG + chr5_2:39391202-39391221 None:intergenic 35.0%
AAAACCGGAATTAACAAACC+GGG + chr5_2:39391229-39391248 None:intergenic 35.0%
GAAAACCGGAATTAACAAAC+CGG + chr5_2:39391230-39391249 None:intergenic 35.0%
GTACAACATGGTTTATGTGA+TGG - chr5_2:39391301-39391320 Msa0769830:three_prime_UTR 35.0%
!! GATTCGATTTGGTACAAACA+CGG - chr5_2:39391497-39391516 Msa0769830:three_prime_UTR 35.0%
ACAAATCGTCCCTAAACTTA+AGG - chr5_2:39391665-39391684 Msa0769830:CDS 35.0%
AACGATAAAGTTGTCAATCG+TGG + chr5_2:39392007-39392026 None:intergenic 35.0%
! GCAATCTGAGATTTACAACA+TGG + chr5_2:39392180-39392199 None:intergenic 35.0%
!! TATTGCAGTATAGTGGATAG+CGG - chr5_2:39392218-39392237 Msa0769830:CDS 35.0%
AAACACAAACAGAAACAGAG+AGG - chr5_2:39392567-39392586 Msa0769830:intron 35.0%
AGAACTCAAACTTCAAGGAA+CGG - chr5_2:39392693-39392712 Msa0769830:CDS 35.0%
CGTTATTAGAGGTTGAAAAG+CGG + chr5_2:39392953-39392972 None:intergenic 35.0%
! CGCTTTTCAACCTCTAATAA+CGG - chr5_2:39392951-39392970 Msa0769830:intron 35.0%
TAAATAGCAGCCGTTATTAG+AGG + chr5_2:39392964-39392983 None:intergenic 35.0%
GTTGTGAAGAAGGATAGAAA+AGG - chr5_2:39393415-39393434 Msa0769830:intron 35.0%
TTTAGTATATCATCAGGGAC+AGG + chr5_2:39393478-39393497 None:intergenic 35.0%
! GAGGCTTTAGTATATCATCA+GGG + chr5_2:39393483-39393502 None:intergenic 35.0%
ATACTAAAGCCTCCTTATGT+AGG - chr5_2:39393490-39393509 Msa0769830:intron 35.0%
TCAGATGTACTTCCAGAAAT+GGG - chr5_2:39393514-39393533 Msa0769830:intron 35.0%
TGATATTCAGTTCCCATTTC+TGG + chr5_2:39393529-39393548 None:intergenic 35.0%
! CTGAAGGTATAGCTAAAATG+AGG - chr5_2:39393560-39393579 Msa0769830:intron 35.0%
AATCTCAATAACAACAGTGC+TGG - chr5_2:39394100-39394119 Msa0769830:intron 35.0%
ATCTCAATAACAACAGTGCT+GGG - chr5_2:39394101-39394120 Msa0769830:intron 35.0%
! GTTTTTCTTAAAGGGAACCT+AGG - chr5_2:39394454-39394473 Msa0769830:intron 35.0%
! CATAGTACTCACTAACTTGT+GGG - chr5_2:39394619-39394638 Msa0769830:intron 35.0%
ACGTAGCCTCAGATAAATTT+GGG + chr5_2:39394659-39394678 None:intergenic 35.0%
TACGTAGCCTCAGATAAATT+TGG + chr5_2:39394660-39394679 None:intergenic 35.0%
! ACTAGGGTAAAAGCATGATA+CGG + chr5_2:39394779-39394798 None:intergenic 35.0%
TTTGAACTCCTATTACCACT+TGG - chr5_2:39394826-39394845 Msa0769830:intron 35.0%
!! ACAAGAGCACGTATGATTTT+AGG - chr5_2:39395066-39395085 Msa0769830:intron 35.0%
!! CAAGAGCACGTATGATTTTA+GGG - chr5_2:39395067-39395086 Msa0769830:intron 35.0%
!! AAGAGCACGTATGATTTTAG+GGG - chr5_2:39395068-39395087 Msa0769830:intron 35.0%
GGTAAACCAATTACGAAATG+AGG + chr5_2:39395110-39395129 None:intergenic 35.0%
! ACGCTTACATGGGTATTTTA+AGG - chr5_2:39395188-39395207 Msa0769830:intron 35.0%
GTAAGATACATGTTGGCAAA+GGG + chr5_2:39395346-39395365 None:intergenic 35.0%
! TGAGAGAGAGTATGAGTTAA+TGG + chr5_2:39395392-39395411 None:intergenic 35.0%
ACTCATACTCTCTCTCAATT+AGG - chr5_2:39395395-39395414 Msa0769830:intron 35.0%
CTCATACTCTCTCTCAATTA+GGG - chr5_2:39395396-39395415 Msa0769830:intron 35.0%
TCATACTCTCTCTCAATTAG+GGG - chr5_2:39395397-39395416 Msa0769830:intron 35.0%
CAATGCATCATACAGGTAAT+AGG + chr5_2:39395763-39395782 None:intergenic 35.0%
! TTTCTTGTCTGACTTGATCT+TGG - chr5_2:39395982-39396001 Msa0769830:intron 35.0%
! ACTGATGTGCATACACTTTT+CGG + chr5_2:39396114-39396133 None:intergenic 35.0%
!!! ATCCAACATTTTTTCCAACC+TGG - chr5_2:39396350-39396369 Msa0769830:intron 35.0%
! ATCCAGGTTGGAAAAAATGT+TGG + chr5_2:39396355-39396374 None:intergenic 35.0%
TTTGTACAAAACATCCAGGT+TGG + chr5_2:39396367-39396386 None:intergenic 35.0%
AATCCCTTGTGAATAATCAG+TGG + chr5_2:39396424-39396443 None:intergenic 35.0%
ATGATATTATGGAGCAACCT+AGG + chr5_2:39396510-39396529 None:intergenic 35.0%
TGGCTGGGATAATGATATTA+TGG + chr5_2:39396521-39396540 None:intergenic 35.0%
! TTAGGTATGAAAGTATGGCT+GGG + chr5_2:39396536-39396555 None:intergenic 35.0%
! TTTAGGTATGAAAGTATGGC+TGG + chr5_2:39396537-39396556 None:intergenic 35.0%
TTCTCATTCCTTTACTAACC+AGG + chr5_2:39396801-39396820 None:intergenic 35.0%
! GGGAATTTTATGATACTCCA+TGG - chr5_2:39396914-39396933 Msa0769830:intron 35.0%
CTGTGCTTTATGACATTTAG+TGG - chr5_2:39397049-39397068 Msa0769830:intron 35.0%
! CTTCTACATTCGCTTTGTTA+GGG - chr5_2:39397103-39397122 Msa0769830:intron 35.0%
GAGGAATTGAATTTCGTGTA+TGG + chr5_2:39397324-39397343 None:intergenic 35.0%
CAAGCATTTGTGCAATTACA+TGG - chr5_2:39397346-39397365 Msa0769830:intron 35.0%
!! GGTACCCCTTTTAAGAAAAT+TGG - chr5_2:39397456-39397475 Msa0769830:intron 35.0%
!! ATGCAATGTAGTATTGATGC+TGG + chr5_2:39397551-39397570 None:intergenic 35.0%
CTGTTTGGAAATCTCAAAGT+TGG + chr5_2:39397672-39397691 None:intergenic 35.0%
CTTAATCTATTGTGGGACTT+GGG + chr5_2:39397779-39397798 None:intergenic 35.0%
TCTTAATCTATTGTGGGACT+TGG + chr5_2:39397780-39397799 None:intergenic 35.0%
! GGCCTTATCTTAATCTATTG+TGG + chr5_2:39397787-39397806 None:intergenic 35.0%
CAAACTCAACTTTGCAAAAC+TGG + chr5_2:39397851-39397870 None:intergenic 35.0%
! ATACTCCTAGAATTTGGGTT+GGG + chr5_2:39397875-39397894 None:intergenic 35.0%
GTTTGGATACTCCTAGAATT+TGG + chr5_2:39397881-39397900 None:intergenic 35.0%
!! ATTCTAGGAGTATCCAAACA+AGG - chr5_2:39397882-39397901 Msa0769830:CDS 35.0%
! TACTACACATTTTCCTGATG+GGG + chr5_2:39398042-39398061 None:intergenic 35.0%
! CTACTACACATTTTCCTGAT+GGG + chr5_2:39398043-39398062 None:intergenic 35.0%
! TCTACTACACATTTTCCTGA+TGG + chr5_2:39398044-39398063 None:intergenic 35.0%
!!! TTTGTTTTGTCTCTACCATG+TGG + chr5_2:39398142-39398161 None:intergenic 35.0%
ATTACGCATGTAGTAGAAGT+TGG + chr5_2:39398224-39398243 None:intergenic 35.0%
! AGATGTTTTGCGATAATCGT+TGG + chr5_2:39398366-39398385 None:intergenic 35.0%
ATGTGTATCCATGAGGTTTA+CGG + chr5_2:39398394-39398413 None:intergenic 35.0%
!! TAGATGTGTTATTTGAGCCT+TGG + chr5_2:39398825-39398844 None:intergenic 35.0%
!!! TGTTTTATTTTGAGCCTTGG+AGG + chr5_2:39398890-39398909 None:intergenic 35.0%
!!! GGATGTTTTATTTTGAGCCT+TGG + chr5_2:39398893-39398912 None:intergenic 35.0%
! TGATTGTGTTTGTTTGAGAC+TGG - chr5_2:39399010-39399029 Msa0769830:intron 35.0%
! GATTGTGTTTGTTTGAGACT+GGG - chr5_2:39399011-39399030 Msa0769830:intron 35.0%
! ATTGTGTTTGTTTGAGACTG+GGG - chr5_2:39399012-39399031 Msa0769830:intron 35.0%
TTACGCTGAAACAGAAAAAC+AGG - chr5_2:39399063-39399082 Msa0769830:intron 35.0%
TACGCTGAAACAGAAAAACA+GGG - chr5_2:39399064-39399083 Msa0769830:intron 35.0%
!! GAAAAAGGTGTTGTAGAGAA+TGG - chr5_2:39399123-39399142 Msa0769830:intron 35.0%
!! CACTCAGCTTTTAACTGTTT+AGG + chr5_2:39399333-39399352 None:intergenic 35.0%
AATTAGGTCATCACAAATGG+TGG + chr5_2:39399528-39399547 None:intergenic 35.0%
GAGAATTAGGTCATCACAAA+TGG + chr5_2:39399531-39399550 None:intergenic 35.0%
GGCACAATTGATTGAGATTA+AGG + chr5_2:39399558-39399577 None:intergenic 35.0%
GAGCATGTGAAATGAGAATT+AGG + chr5_2:39399579-39399598 None:intergenic 35.0%
! GATGATACTTTTATGCATGG+AGG - chr5_2:39399618-39399637 Msa0769830:intron 35.0%
! AATTTAAGGTGCCTGTGTAT+TGG + chr5_2:39399815-39399834 None:intergenic 35.0%
! TAAGGATTAGTGAGCAACTT+TGG + chr5_2:39400478-39400497 None:intergenic 35.0%
CAATCATCACCTCGAATATT+TGG + chr5_2:39400755-39400774 None:intergenic 35.0%
GAAGTAGTATGGCAAAGAAA+TGG + chr5_2:39400781-39400800 None:intergenic 35.0%
! TTGCCATACTACTTCACTTT+TGG - chr5_2:39400786-39400805 Msa0769830:intron 35.0%
ACACCAAAAGTGAAGTAGTA+TGG + chr5_2:39400792-39400811 None:intergenic 35.0%
! AACATTTAGAGTTGTCTGTG+AGG - chr5_2:39400818-39400837 Msa0769830:intron 35.0%
! ACATTTAGAGTTGTCTGTGA+GGG - chr5_2:39400819-39400838 Msa0769830:intron 35.0%
! AAAGTATTCAAGGATACACG+TGG - chr5_2:39400894-39400913 Msa0769830:intron 35.0%
!! ATTGGCTTGAAAGAAGAGAT+AGG - chr5_2:39400932-39400951 Msa0769830:intron 35.0%
ACCATTCTGATAACAAGAAC+TGG - chr5_2:39401226-39401245 Msa0769830:intron 35.0%
! TCCAGTTCTTGTTATCAGAA+TGG + chr5_2:39401230-39401249 None:intergenic 35.0%
CTGTTCCTCTGTACTGAAAA+TGG - chr5_2:39391108-39391127 Msa0769830:three_prime_UTR 40.0%
TCAATTTCTACCACGTTTCC+CGG - chr5_2:39391208-39391227 Msa0769830:three_prime_UTR 40.0%
AATTAACAAACCGGGAAACG+TGG + chr5_2:39391221-39391240 None:intergenic 40.0%
!! GTTTCCCGGTTTGTTAATTC+CGG - chr5_2:39391222-39391241 Msa0769830:three_prime_UTR 40.0%
TGGATACCTCTTGATTCTTC+TGG + chr5_2:39391415-39391434 None:intergenic 40.0%
! CTTCTGATTGAAGGTGTATC+TGG + chr5_2:39391605-39391624 None:intergenic 40.0%
! ACACCTTCAATCAGAAGTGT+CGG - chr5_2:39391608-39391627 Msa0769830:intron 40.0%
TTGTTCCGTGATACGCTATT+TGG - chr5_2:39391896-39391915 Msa0769830:intron 40.0%
TTGCACCAAATAGCGTATCA+CGG + chr5_2:39391904-39391923 None:intergenic 40.0%
TCGTGGATAGCAGAAAATAG+CGG + chr5_2:39391990-39392009 None:intergenic 40.0%
ACAAACGTGATCAACAGGTT+GGG + chr5_2:39392036-39392055 None:intergenic 40.0%
TACAAACGTGATCAACAGGT+TGG + chr5_2:39392037-39392056 None:intergenic 40.0%
AGGCAGCCTTTAATTCAAGT+AGG - chr5_2:39392117-39392136 Msa0769830:intron 40.0%
GGCAGCCTTTAATTCAAGTA+GGG - chr5_2:39392118-39392137 Msa0769830:intron 40.0%
!! ATTGCAGTATAGTGGATAGC+GGG - chr5_2:39392219-39392238 Msa0769830:CDS 40.0%
ACAAACAGAAACAGAGAGGA+AGG - chr5_2:39392571-39392590 Msa0769830:intron 40.0%
CAAACAGAAACAGAGAGGAA+GGG - chr5_2:39392572-39392591 Msa0769830:intron 40.0%
AAACAGAAACAGAGAGGAAG+GGG - chr5_2:39392573-39392592 Msa0769830:intron 40.0%
!! CTTGTGTTGTTTCTCTGCAA+AGG + chr5_2:39392607-39392626 None:intergenic 40.0%
CTTTGCAGAGAAACAACACA+AGG - chr5_2:39392605-39392624 Msa0769830:intron 40.0%
CAACACAAGGAGAACAATGA+TGG - chr5_2:39392618-39392637 Msa0769830:intron 40.0%
ATGGCAGAACTCAAACTTCA+AGG - chr5_2:39392688-39392707 Msa0769830:CDS 40.0%
ATGAAGAGAACGTGAACTTC+AGG - chr5_2:39393393-39393412 Msa0769830:intron 40.0%
!! TGAACTTCAGGTTGTGAAGA+AGG - chr5_2:39393405-39393424 Msa0769830:intron 40.0%
ATAGAAAAGGGCCTCCATTA+AGG - chr5_2:39393428-39393447 Msa0769830:intron 40.0%
! GATACTTTTCCACGCCTTAA+TGG + chr5_2:39393445-39393464 None:intergenic 40.0%
! GGAGGCTTTAGTATATCATC+AGG + chr5_2:39393484-39393503 None:intergenic 40.0%
AGTACATCTGAGCCTACATA+AGG + chr5_2:39393505-39393524 None:intergenic 40.0%
CTCAGATGTACTTCCAGAAA+TGG - chr5_2:39393513-39393532 Msa0769830:intron 40.0%
CCTCCTTCTAGCATATACTT+CGG - chr5_2:39393646-39393665 Msa0769830:intron 40.0%
CTCCTTCTAGCATATACTTC+GGG - chr5_2:39393647-39393666 Msa0769830:intron 40.0%
! AGAGAAGCACAAAGTAAGCT+AGG + chr5_2:39393682-39393701 None:intergenic 40.0%
TGAGAATCTTCGTAAACACG+TGG - chr5_2:39393905-39393924 Msa0769830:intron 40.0%
! AATAACAACAGTGCTGGGAA+GGG - chr5_2:39394106-39394125 Msa0769830:intron 40.0%
AAGTGAAGGTCGAAACGAAA+AGG - chr5_2:39394350-39394369 Msa0769830:intron 40.0%
AGTGAAGGTCGAAACGAAAA+GGG - chr5_2:39394351-39394370 Msa0769830:intron 40.0%
!! CGAAAAGGGATTTGTTGCAT+TGG - chr5_2:39394365-39394384 Msa0769830:intron 40.0%
! ATTTGCTGGTCTAAGGTTTC+TGG - chr5_2:39394421-39394440 Msa0769830:intron 40.0%
! TGGTCTAAGGTTTCTGGAAA+AGG - chr5_2:39394427-39394446 Msa0769830:intron 40.0%
! TAAGGTTTCTGGAAAAGGAG+AGG - chr5_2:39394432-39394451 Msa0769830:intron 40.0%
CCACAAGTTAGTGAGTACTA+TGG + chr5_2:39394621-39394640 None:intergenic 40.0%
CCATAGTACTCACTAACTTG+TGG - chr5_2:39394618-39394637 Msa0769830:intron 40.0%
TAGTCTGAGTTTACGAGTCT+AGG + chr5_2:39394727-39394746 None:intergenic 40.0%
! ATCATGCTTTTACCCTAGTG+TGG - chr5_2:39394780-39394799 Msa0769830:intron 40.0%
! TCATGCTTTTACCCTAGTGT+GGG - chr5_2:39394781-39394800 Msa0769830:intron 40.0%
CAATGCATCCAAGTGGTAAT+AGG + chr5_2:39394837-39394856 None:intergenic 40.0%
CTATTACCACTTGGATGCAT+TGG - chr5_2:39394835-39394854 Msa0769830:intron 40.0%
GTAAATACGACGCGATTTGT+AGG + chr5_2:39395030-39395049 None:intergenic 40.0%
ATCGCGTCGTATTTACTGAT+TGG - chr5_2:39395034-39395053 Msa0769830:intron 40.0%
AATCATACGTGCTCTTGTAC+CGG + chr5_2:39395064-39395083 None:intergenic 40.0%
GGTAAGATACATGTTGGCAA+AGG + chr5_2:39395347-39395366 None:intergenic 40.0%
!!! TTTGAGTATGGGGTTTTGAG+AGG - chr5_2:39395709-39395728 Msa0769830:intron 40.0%
AACTTTGTTGATGTTGCCTG+TGG + chr5_2:39395808-39395827 None:intergenic 40.0%
GATCAAGTCAGACAAGAAAG+TGG + chr5_2:39395981-39396000 None:intergenic 40.0%
CATTAGTTGTTACAGAAGGC+TGG + chr5_2:39396017-39396036 None:intergenic 40.0%
CACCAGATGATAATTGATGC+TGG - chr5_2:39396054-39396073 Msa0769830:intron 40.0%
CACCAGCATCAATTATCATC+TGG + chr5_2:39396059-39396078 None:intergenic 40.0%
TTAATGAGTGCATGTGCCAT+GGG - chr5_2:39396133-39396152 Msa0769830:intron 40.0%
! GAGTTGAGAAGCATACATTC+AGG + chr5_2:39396305-39396324 None:intergenic 40.0%
GATGAAACTGTCGAAGATGT+AGG - chr5_2:39396627-39396646 Msa0769830:CDS 40.0%
AAACTGTCGAAGATGTAGGA+TGG - chr5_2:39396631-39396650 Msa0769830:CDS 40.0%
AGGATGGTGATATACATGAG+CGG - chr5_2:39396647-39396666 Msa0769830:CDS 40.0%
TAAACAGACTGATGGGAACA+TGG + chr5_2:39396730-39396749 None:intergenic 40.0%
TTGCGCATAAACAGACTGAT+GGG + chr5_2:39396737-39396756 None:intergenic 40.0%
AAACACCACCTGGTTAGTAA+AGG - chr5_2:39396790-39396809 Msa0769830:CDS 40.0%
TCATTCCTTTACTAACCAGG+TGG + chr5_2:39396798-39396817 None:intergenic 40.0%
CAGAATATTGGCAACTAGCT+TGG + chr5_2:39397032-39397051 None:intergenic 40.0%
CCTAACAAAGCGAATGTAGA+AGG + chr5_2:39397105-39397124 None:intergenic 40.0%
! CCTTCTACATTCGCTTTGTT+AGG - chr5_2:39397102-39397121 Msa0769830:intron 40.0%
! TCGCTTTGTTAGGGATATCA+TGG - chr5_2:39397112-39397131 Msa0769830:intron 40.0%
! AATTGCACAAATGCTTGCTG+AGG + chr5_2:39397343-39397362 None:intergenic 40.0%
AATAAACACCCAGCACTACT+CGG + chr5_2:39397748-39397767 None:intergenic 40.0%
!! CAAAACTGGCTTGTAAAGTG+AGG + chr5_2:39397837-39397856 None:intergenic 40.0%
TTTGACCCAACCCAAATTCT+AGG - chr5_2:39397867-39397886 Msa0769830:CDS 40.0%
GATACTCCTAGAATTTGGGT+TGG + chr5_2:39397876-39397895 None:intergenic 40.0%
CAAATTTCGCTCGTATTCCA+GGG + chr5_2:39397951-39397970 None:intergenic 40.0%
ACAAATTTCGCTCGTATTCC+AGG + chr5_2:39397952-39397971 None:intergenic 40.0%
ATGCTTCATCTCACATGACA+GGG + chr5_2:39398097-39398116 None:intergenic 40.0%
TATGCTTCATCTCACATGAC+AGG + chr5_2:39398098-39398117 None:intergenic 40.0%
TGAGAGAATGTGTATCCATG+AGG + chr5_2:39398401-39398420 None:intergenic 40.0%
CCTGTATGTTTCATGTGTCT+CGG - chr5_2:39398600-39398619 Msa0769830:intron 40.0%
CTGTATGTTTCATGTGTCTC+GGG - chr5_2:39398601-39398620 Msa0769830:intron 40.0%
TATGTAGTCACTCGCAGATA+GGG - chr5_2:39398625-39398644 Msa0769830:intron 40.0%
TTTCCTAGACTTCAACGTAG+TGG + chr5_2:39398707-39398726 None:intergenic 40.0%
CAAATATGTTCCAGTCTCCA+AGG - chr5_2:39398805-39398824 Msa0769830:intron 40.0%
GAAACAAGTTAAAGCCTCCA+AGG - chr5_2:39398873-39398892 Msa0769830:intron 40.0%
ACGCTGAAACAGAAAAACAG+GGG - chr5_2:39399065-39399084 Msa0769830:intron 40.0%
ACAGGGGAAATAAATAGTGG+TGG - chr5_2:39399081-39399100 Msa0769830:intron 40.0%
GGAACTAGCTGAGAAGAAAA+AGG - chr5_2:39399108-39399127 Msa0769830:intron 40.0%
CGATGTTGGAGAAGAAAGAA+AGG - chr5_2:39399214-39399233 Msa0769830:intron 40.0%
CTTAACTTTGTTGCACTGTC+TGG - chr5_2:39399495-39399514 Msa0769830:CDS 40.0%
!! ATGCATGGAGGTGTTGAAAT+TGG - chr5_2:39399630-39399649 Msa0769830:intron 40.0%
! CTAGCCTGTTGTACTTTTCT+TGG - chr5_2:39399847-39399866 Msa0769830:intron 40.0%
! CTGTCCAAGAAAAGTACAAC+AGG + chr5_2:39399854-39399873 None:intergenic 40.0%
! TACACCGTAGCCATACTTTT+CGG + chr5_2:39400226-39400245 None:intergenic 40.0%
TGAAAGGTAACTCACGATGA+TGG + chr5_2:39400308-39400327 None:intergenic 40.0%
TAGTGAGCAACTTTGGTTAC+CGG + chr5_2:39400471-39400490 None:intergenic 40.0%
GATTGTAAGTTCATGCTCGT+CGG - chr5_2:39401032-39401051 Msa0769830:intron 40.0%
! TTTCTTCGTATTGGTCAAGC+TGG - chr5_2:39401055-39401074 Msa0769830:intron 40.0%
TCTGCAGTTCAGAATTTCAC+AGG + chr5_2:39401109-39401128 None:intergenic 40.0%
TGCAGAGCCTATTCTTTCAA+TGG - chr5_2:39401123-39401142 Msa0769830:intron 40.0%
GCAGAGCCTATTCTTTCAAT+GGG - chr5_2:39401124-39401143 Msa0769830:intron 40.0%
GTGCTTCCCATTGAAAGAAT+AGG + chr5_2:39401133-39401152 None:intergenic 40.0%
!! GAAGCACTGATTGCATTACA+TGG - chr5_2:39401146-39401165 Msa0769830:intron 40.0%
GTAACTGTTGTCCAGTTATC+TGG + chr5_2:39401172-39401191 None:intergenic 40.0%
TGGACAACAGTTACAACTGA+TGG - chr5_2:39401178-39401197 Msa0769830:intron 40.0%
AATGGTATGCTCAAACTGTG+CGG + chr5_2:39401212-39401231 None:intergenic 40.0%
TAGTGAAGACTCTTATCCAG+AGG - chr5_2:39401484-39401503 Msa0769830:intron 40.0%
AGTGAAGACTCTTATCCAGA+GGG - chr5_2:39401485-39401504 Msa0769830:intron 40.0%
TGAGATGACTATCTGGAGAA+TGG - chr5_2:39401514-39401533 Msa0769830:CDS 40.0%
TGACTATCTGGAGAATGGAT+TGG - chr5_2:39401519-39401538 Msa0769830:CDS 40.0%
!! TATCTGGAGAATGGATTGGT+AGG - chr5_2:39401523-39401542 Msa0769830:CDS 40.0%
!! ATCTGGAGAATGGATTGGTA+GGG - chr5_2:39401524-39401543 Msa0769830:CDS 40.0%
ACGTAAGACACATCAACCAT+TGG - chr5_2:39401743-39401762 Msa0769830:CDS 40.0%
AGGTGATGTGTCGCCATAAA+AGG + chr5_2:39391182-39391201 None:intergenic 45.0%
! GTTTTTGCTCGGAAGATGTC+AGG - chr5_2:39391378-39391397 Msa0769830:three_prime_UTR 45.0%
CAACACTCACACGTTTACAC+CGG - chr5_2:39391530-39391549 Msa0769830:three_prime_UTR 45.0%
!! AATCAGAAGTGTCGGTGCTA+CGG - chr5_2:39391616-39391635 Msa0769830:intron 45.0%
! TGGATTCGGTTGAGTCAAAC+CGG - chr5_2:39391790-39391809 Msa0769830:intron 45.0%
ACACTTATCCGCAAACACAC+CGG + chr5_2:39391812-39391831 None:intergenic 45.0%
CTATAGCACTGTTGCGTAGT+GGG - chr5_2:39391953-39391972 Msa0769830:intron 45.0%
!! CATTGTTAGCTTGCTCTCGT+TGG + chr5_2:39392671-39392690 None:intergenic 45.0%
CAACGAGAGCAAGCTAACAA+TGG - chr5_2:39392669-39392688 Msa0769830:CDS 45.0%
CTCAAACTTCAAGGAACGGA+TGG - chr5_2:39392697-39392716 Msa0769830:CDS 45.0%
GAACGAAAAGAGGCCACAAT+TGG - chr5_2:39392754-39392773 Msa0769830:intron 45.0%
! CCGCTATTGCAATTTTGTGG+GGG + chr5_2:39392890-39392909 None:intergenic 45.0%
CCCCCACAAAATTGCAATAG+CGG - chr5_2:39392887-39392906 Msa0769830:intron 45.0%
! GCCGCTATTGCAATTTTGTG+GGG + chr5_2:39392891-39392910 None:intergenic 45.0%
! GGCCGCTATTGCAATTTTGT+GGG + chr5_2:39392892-39392911 None:intergenic 45.0%
! TGGCCGCTATTGCAATTTTG+TGG + chr5_2:39392893-39392912 None:intergenic 45.0%
! ACTTTTCCACGCCTTAATGG+AGG + chr5_2:39393442-39393461 None:intergenic 45.0%
ACATCTGAGCCTACATAAGG+AGG + chr5_2:39393502-39393521 None:intergenic 45.0%
ATAGCTAAAATGAGGGCTGC+AGG - chr5_2:39393568-39393587 Msa0769830:intron 45.0%
CTTGAACTTCGCAGGAACTT+TGG - chr5_2:39393609-39393628 Msa0769830:intron 45.0%
ACTTCGCAGGAACTTTGGTT+AGG - chr5_2:39393614-39393633 Msa0769830:intron 45.0%
CTTCGCAGGAACTTTGGTTA+GGG - chr5_2:39393615-39393634 Msa0769830:intron 45.0%
CCGAAGTATATGCTAGAAGG+AGG + chr5_2:39393649-39393668 None:intergenic 45.0%
CACCCGAAGTATATGCTAGA+AGG + chr5_2:39393652-39393671 None:intergenic 45.0%
GCATATACTTCGGGTGTGTT+TGG - chr5_2:39393656-39393675 Msa0769830:intron 45.0%
! CAATAACAACAGTGCTGGGA+AGG - chr5_2:39394105-39394124 Msa0769830:intron 45.0%
!! CAGCAGCAAGTTCTAAGTGA+AGG - chr5_2:39394336-39394355 Msa0769830:intron 45.0%
CACGTTACTCTACTCACTGT+TGG - chr5_2:39394396-39394415 Msa0769830:intron 45.0%
ACTCACTGTTGGAGATTTGC+TGG - chr5_2:39394407-39394426 Msa0769830:intron 45.0%
!! GTTGGAGATTTGCTGGTCTA+AGG - chr5_2:39394414-39394433 Msa0769830:intron 45.0%
GACTCTTCGACACTTATCCT+AGG + chr5_2:39394474-39394493 None:intergenic 45.0%
!! TAAGTGTCGAAGAGTCTCAG+AGG - chr5_2:39394478-39394497 Msa0769830:intron 45.0%
! GTCTCAGAGGTTTTGCTCTA+AGG - chr5_2:39394491-39394510 Msa0769830:intron 45.0%
! CATGCTTTTACCCTAGTGTG+GGG - chr5_2:39394782-39394801 Msa0769830:intron 45.0%
AGGAAACCAATGCATCCAAG+TGG + chr5_2:39394844-39394863 None:intergenic 45.0%
TATGTTGTCAATAGCAGCCC+AGG - chr5_2:39394916-39394935 Msa0769830:intron 45.0%
ATGTTGTCAATAGCAGCCCA+GGG - chr5_2:39394917-39394936 Msa0769830:intron 45.0%
AACATGCCGATACAGAACAG+TGG - chr5_2:39394947-39394966 Msa0769830:intron 45.0%
! TGCATCGATGCTGCACAAAA+TGG - chr5_2:39394985-39395004 Msa0769830:intron 45.0%
!! ACAGGAGCGCGTATGATTTT+AGG - chr5_2:39395133-39395152 Msa0769830:intron 45.0%
!! CAGGAGCGCGTATGATTTTA+GGG - chr5_2:39395134-39395153 Msa0769830:intron 45.0%
!! AGGAGCGCGTATGATTTTAG+GGG - chr5_2:39395135-39395154 Msa0769830:intron 45.0%
GCAGAAGAGAAGAGGGTAAT+AGG + chr5_2:39395233-39395252 None:intergenic 45.0%
GTTGGTTGCAGAAGAGAAGA+GGG + chr5_2:39395240-39395259 None:intergenic 45.0%
! TGTTGGTTGCAGAAGAGAAG+AGG + chr5_2:39395241-39395260 None:intergenic 45.0%
TGAAAAGAGAGAACGGGTGT+TGG + chr5_2:39395258-39395277 None:intergenic 45.0%
TTGGCAAAGGGCTAGAATAG+CGG + chr5_2:39395334-39395353 None:intergenic 45.0%
! ACGCAATCTCAGTTTTGCGT+CGG - chr5_2:39395434-39395453 Msa0769830:intron 45.0%
ACTTAAGCTCGGATGAGTGT+AGG - chr5_2:39395648-39395667 Msa0769830:intron 45.0%
GAGTGTAGGAGTCAACTAAC+AGG - chr5_2:39395662-39395681 Msa0769830:intron 45.0%
!!! AGTATGGGGTTTTGAGAGGT+AGG - chr5_2:39395713-39395732 Msa0769830:intron 45.0%
GTTAATGAGTGCATGTGCCA+TGG - chr5_2:39396132-39396151 Msa0769830:intron 45.0%
! CACTGGTTAAGGTGTCAATG+AGG + chr5_2:39396566-39396585 None:intergenic 45.0%
CTCATTGACACCTTAACCAG+TGG - chr5_2:39396564-39396583 Msa0769830:intron 45.0%
! TAACAGGAGACCACTGGTTA+AGG + chr5_2:39396577-39396596 None:intergenic 45.0%
GGTGATATACATGAGCGGAA+TGG - chr5_2:39396652-39396671 Msa0769830:intron 45.0%
CTTGCGCATAAACAGACTGA+TGG + chr5_2:39396738-39396757 None:intergenic 45.0%
CATCAGTCTGTTTATGCGCA+AGG - chr5_2:39396736-39396755 Msa0769830:intron 45.0%
TAGTCTACTGAAACACCACC+TGG - chr5_2:39396780-39396799 Msa0769830:CDS 45.0%
CTCTTCGGTTACCTATCAAC+AGG + chr5_2:39397403-39397422 None:intergenic 45.0%
!! ATAGGTAACCGAAGAGTGCT+TGG - chr5_2:39397407-39397426 Msa0769830:intron 45.0%
TCCTTTCTCCAAGCACTCTT+CGG + chr5_2:39397418-39397437 None:intergenic 45.0%
GGAATAGCCGTTTGCAAAGA+TGG - chr5_2:39397435-39397454 Msa0769830:intron 45.0%
!! AGGGGTACCATCTTTGCAAA+CGG + chr5_2:39397445-39397464 None:intergenic 45.0%
GGTATCAGAGCCTATTGATC+CGG - chr5_2:39397709-39397728 Msa0769830:intron 45.0%
! ATAATGACGCTTTTGGTCCC+TGG - chr5_2:39397931-39397950 Msa0769830:CDS 45.0%
AGTAGAAAATGGAGGCCATG+TGG - chr5_2:39398058-39398077 Msa0769830:intron 45.0%
TCTCTTCACCGTAAACCTCA+TGG - chr5_2:39398383-39398402 Msa0769830:intron 45.0%
CCGAGACACATGAAACATAC+AGG + chr5_2:39398603-39398622 None:intergenic 45.0%
CTATGTAGTCACTCGCAGAT+AGG - chr5_2:39398624-39398643 Msa0769830:intron 45.0%
GCTACAGCAATGTAGTGGTA+TGG - chr5_2:39398681-39398700 Msa0769830:intron 45.0%
GTTATTTGAGCCTTGGAGAC+TGG + chr5_2:39398818-39398837 None:intergenic 45.0%
ACTGGGGATGCCATAATAGA+GGG - chr5_2:39399028-39399047 Msa0769830:intron 45.0%
GATGCCATAATAGAGGGGAA+GGG - chr5_2:39399034-39399053 Msa0769830:intron 45.0%
ATGCCATAATAGAGGGGAAG+GGG - chr5_2:39399035-39399054 Msa0769830:intron 45.0%
AGAGCTCGTACTGAGAAGAA+AGG - chr5_2:39399162-39399181 Msa0769830:intron 45.0%
TCTTTCTTCTCCAACATCGC+AGG + chr5_2:39399213-39399232 None:intergenic 45.0%
CACTACGCAAAACAGTGTTG+TGG + chr5_2:39399411-39399430 None:intergenic 45.0%
ACCTCTGTAGCAAATCCCAA+CGG + chr5_2:39399457-39399476 None:intergenic 45.0%
TAGGTCATCACAAATGGTGG+AGG + chr5_2:39399525-39399544 None:intergenic 45.0%
!!! TATTTTTTGTCCCTGCCCCA+TGG - chr5_2:39399719-39399738 Msa0769830:intron 45.0%
GTCATACCTAGCCAATACAC+AGG - chr5_2:39399801-39399820 Msa0769830:intron 45.0%
AGTGAGCATGCCGAAAAGTA+TGG - chr5_2:39400213-39400232 Msa0769830:intron 45.0%
! CATGCCGAAAAGTATGGCTA+CGG - chr5_2:39400219-39400238 Msa0769830:intron 45.0%
AAAGTATGGCTACGGTGTAG+TGG - chr5_2:39400227-39400246 Msa0769830:intron 45.0%
!! GTGTAGTGGAGCGTTTTGTT+GGG - chr5_2:39400241-39400260 Msa0769830:intron 45.0%
TGCTTGATAGGCAATGACGA+AGG - chr5_2:39400672-39400691 Msa0769830:intron 45.0%
TTGATAGGCAATGACGAAGG+AGG - chr5_2:39400675-39400694 Msa0769830:intron 45.0%
ACGCTAAACACATTATGGGC+AGG + chr5_2:39400850-39400869 None:intergenic 45.0%
GCATTACATGGCCAGATAAC+TGG - chr5_2:39401158-39401177 Msa0769830:intron 45.0%
ATCCTCCAGAAGGAAACTGA+AGG + chr5_2:39401373-39401392 None:intergenic 45.0%
GTGAAGACTCTTATCCAGAG+GGG - chr5_2:39401486-39401505 Msa0769830:intron 45.0%
!! TCTGGAGAATGGATTGGTAG+GGG - chr5_2:39401525-39401544 Msa0769830:CDS 45.0%
!!! TTATATATATTTTTTTTTAC+CGG + chr5_2:39391552-39391571 None:intergenic 5.0%
!! TAAAAAGAAAATAAAAAATT+AGG - chr5_2:39392850-39392869 Msa0769830:intron 5.0%
!! AAAAAGAAAATAAAAAATTA+GGG - chr5_2:39392851-39392870 Msa0769830:intron 5.0%
!! TAAATAAAATAAACTTTATT+TGG + chr5_2:39393318-39393337 None:intergenic 5.0%
!! TATATATATATATATAATTG+TGG - chr5_2:39399989-39400008 Msa0769830:intron 5.0%
!!! TAAAATTATATTATATCTTT+TGG - chr5_2:39401602-39401621 Msa0769830:intron 5.0%
!! GAGCGCCATTTTCAGTACAG+AGG + chr5_2:39391116-39391135 None:intergenic 50.0%
TGCTCGGAAGATGTCAGGAT+TGG - chr5_2:39391383-39391402 Msa0769830:three_prime_UTR 50.0%
TCGGAAGATGTCAGGATTGG+AGG - chr5_2:39391386-39391405 Msa0769830:three_prime_UTR 50.0%
GAAGATGTCAGGATTGGAGG+AGG - chr5_2:39391389-39391408 Msa0769830:three_prime_UTR 50.0%
AGGAGGCCAGAAGAATCAAG+AGG - chr5_2:39391406-39391425 Msa0769830:three_prime_UTR 50.0%
! GCACCGACACTTCTGATTGA+AGG + chr5_2:39391614-39391633 None:intergenic 50.0%
GAGTCAAACCGGTGTGTTTG+CGG - chr5_2:39391801-39391820 Msa0769830:intron 50.0%
GCTATAGCACTGTTGCGTAG+TGG - chr5_2:39391952-39391971 Msa0769830:intron 50.0%
CGTACATAGACGTGGAAGCA+TGG + chr5_2:39392535-39392554 None:intergenic 50.0%
!! TTCTGAGGCGTACATAGACG+TGG + chr5_2:39392543-39392562 None:intergenic 50.0%
ATAGCGGCCATCAAACCCTA+CGG - chr5_2:39392903-39392922 Msa0769830:intron 50.0%
AGTGCATTCCAGCTACCGTA+GGG + chr5_2:39392921-39392940 None:intergenic 50.0%
TACTCTGAATGACGCTTCGC+AGG - chr5_2:39392987-39393006 Msa0769830:intron 50.0%
TTGTCAACAGCGCGCTATAG+CGG + chr5_2:39393053-39393072 None:intergenic 50.0%
! GGCTAGCCACTGTTCTGTAT+CGG + chr5_2:39394956-39394975 None:intergenic 50.0%
!! AGCATCGATGCATGAAGAGG+TGG + chr5_2:39394977-39394996 None:intergenic 50.0%
!! TGCAGCATCGATGCATGAAG+AGG + chr5_2:39394980-39394999 None:intergenic 50.0%
GCGATTTGTAGGTGCAAACG+CGG + chr5_2:39395019-39395038 None:intergenic 50.0%
! CGTAATTGGTTTACCGCGAC+AGG - chr5_2:39395115-39395134 Msa0769830:intron 50.0%
AGTGAGTGAGAGAGAGAGAG+AGG + chr5_2:39395286-39395305 None:intergenic 50.0%
TCCATATGATGTGCCATCCG+CGG - chr5_2:39395308-39395327 Msa0769830:intron 50.0%
!! AATCTCAGTTTTGCGTCGGC+TGG - chr5_2:39395438-39395457 Msa0769830:intron 50.0%
GCTGGATCGCTCCTTAAACT+AGG - chr5_2:39395456-39395475 Msa0769830:CDS 50.0%
! GCTTGCTGGACACTTAAGCT+CGG - chr5_2:39395637-39395656 Msa0769830:intron 50.0%
!!! GGTTTTGAGAGGTAGGTGTC+AGG - chr5_2:39395720-39395739 Msa0769830:intron 50.0%
TTACGTACACGGTACACCAC+AGG - chr5_2:39395789-39395808 Msa0769830:CDS 50.0%
GCCATGGGATACCTGATTCA+CGG - chr5_2:39396148-39396167 Msa0769830:intron 50.0%
ACCTGATTCACGGCAGTTAC+AGG - chr5_2:39396158-39396177 Msa0769830:intron 50.0%
ACCTGTAACTGCCGTGAATC+AGG + chr5_2:39396162-39396181 None:intergenic 50.0%
AGGAACTAACAGGAGACCAC+TGG + chr5_2:39396583-39396602 None:intergenic 50.0%
CATGAGCGGAATGGATGAGT+AGG - chr5_2:39396661-39396680 Msa0769830:intron 50.0%
!! ACCGAAGAGTGCTTGGAGAA+AGG - chr5_2:39397414-39397433 Msa0769830:intron 50.0%
GGCGTCAAGGACAAAAATGG+AGG + chr5_2:39398021-39398040 None:intergenic 50.0%
! TGGGGCGTCAAGGACAAAAA+TGG + chr5_2:39398024-39398043 None:intergenic 50.0%
!! ATTTTCCTGATGGGGCGTCA+AGG + chr5_2:39398034-39398053 None:intergenic 50.0%
GGCTTCCAACTAATGCCACA+TGG + chr5_2:39398076-39398095 None:intergenic 50.0%
! TCCAATGTGTCACTGCCACA+TGG - chr5_2:39398124-39398143 Msa0769830:intron 50.0%
ACCATGTGGCAGTGACACAT+TGG + chr5_2:39398128-39398147 None:intergenic 50.0%
TCGCAGATAGGGTAGTGTAG+CGG - chr5_2:39398636-39398655 Msa0769830:intron 50.0%
! TGTAGCCGTGTAGCGTTTTG+GGG + chr5_2:39398667-39398686 None:intergenic 50.0%
! CTGTAGCCGTGTAGCGTTTT+GGG + chr5_2:39398668-39398687 None:intergenic 50.0%
ACACGGCTACAGCAATGTAG+TGG - chr5_2:39398676-39398695 Msa0769830:intron 50.0%
TGGCCACTACGTTGAAGTCT+AGG - chr5_2:39398701-39398720 Msa0769830:intron 50.0%
GACTGGGGATGCCATAATAG+AGG - chr5_2:39399027-39399046 Msa0769830:intron 50.0%
CTGGGGATGCCATAATAGAG+GGG - chr5_2:39399029-39399048 Msa0769830:intron 50.0%
GGATGCCATAATAGAGGGGA+AGG - chr5_2:39399033-39399052 Msa0769830:intron 50.0%
CATAATAGAGGGGAAGGGGA+GGG - chr5_2:39399039-39399058 Msa0769830:intron 50.0%
AAACAGAGGTCCTGCGATGT+TGG - chr5_2:39399200-39399219 Msa0769830:intron 50.0%
CAGTGTTGTGGCGCAGATTA+GGG + chr5_2:39399399-39399418 None:intergenic 50.0%
ACAGTGTTGTGGCGCAGATT+AGG + chr5_2:39399400-39399419 None:intergenic 50.0%
!! ACCGTTGGGATTTGCTACAG+AGG - chr5_2:39399453-39399472 Msa0769830:CDS 50.0%
!! GGGATTTGCTACAGAGGTCT+CGG - chr5_2:39399459-39399478 Msa0769830:CDS 50.0%
!! GGATTTGCTACAGAGGTCTC+GGG - chr5_2:39399460-39399479 Msa0769830:CDS 50.0%
AAAAACCTCAGCACGCCATG+GGG + chr5_2:39399737-39399756 None:intergenic 50.0%
CAAAAACCTCAGCACGCCAT+GGG + chr5_2:39399738-39399757 None:intergenic 50.0%
TGACCCATGAGGACGATCAA+GGG + chr5_2:39399785-39399804 None:intergenic 50.0%
ATGACCCATGAGGACGATCA+AGG + chr5_2:39399786-39399805 None:intergenic 50.0%
TTGGCTAGGTATGACCCATG+AGG + chr5_2:39399796-39399815 None:intergenic 50.0%
!! AAGGTGCCTGTGTATTGGCT+AGG + chr5_2:39399810-39399829 None:intergenic 50.0%
!! GGTGTAGTGGAGCGTTTTGT+TGG - chr5_2:39400240-39400259 Msa0769830:intron 50.0%
!! CGTTTTGTTGGGCATGGTGT+TGG - chr5_2:39400252-39400271 Msa0769830:intron 50.0%
CAATGACGAAGGAGGTTGCA+TGG - chr5_2:39400683-39400702 Msa0769830:intron 50.0%
GAAGGAGGTTGCATGGTTGA+AGG - chr5_2:39400690-39400709 Msa0769830:intron 50.0%
!! GCTCGTCGGTTTCTTCGTAT+TGG - chr5_2:39401046-39401065 Msa0769830:intron 50.0%
! CTTCGTATTGGTCAAGCTGG+TGG - chr5_2:39401058-39401077 Msa0769830:intron 50.0%
GTCTGCCTTCAGTTTCCTTC+TGG - chr5_2:39401365-39401384 Msa0769830:intron 50.0%
TGCCTTCAGTTTCCTTCTGG+AGG - chr5_2:39401368-39401387 Msa0769830:intron 50.0%
CTCCAGATAGTCATCTCAGC+AGG + chr5_2:39401512-39401531 None:intergenic 50.0%
GTAGGGGGGAATCTAACCAA+TGG + chr5_2:39401762-39401781 None:intergenic 50.0%
ATGGCGCTCACTGCTTCACT+CGG - chr5_2:39391127-39391146 Msa0769830:three_prime_UTR 55.0%
!! GAAGTGTCGGTGCTACGGTT+TGG - chr5_2:39391621-39391640 Msa0769830:intron 55.0%
CCAGCTACCGTAGGGTTTGA+TGG + chr5_2:39392913-39392932 None:intergenic 55.0%
CCATCAAACCCTACGGTAGC+TGG - chr5_2:39392910-39392929 Msa0769830:intron 55.0%
CAGTGCATTCCAGCTACCGT+AGG + chr5_2:39392922-39392941 None:intergenic 55.0%
GTAGCTGGAATGCACTGCAG+TGG - chr5_2:39392925-39392944 Msa0769830:intron 55.0%
AATGACGCTTCGCAGGCCTA+AGG - chr5_2:39392994-39393013 Msa0769830:intron 55.0%
AAAGGGCCTCCATTAAGGCG+TGG - chr5_2:39393433-39393452 Msa0769830:intron 55.0%
TCATCAGGGACAGGTAGACG+TGG + chr5_2:39393469-39393488 None:intergenic 55.0%
GCACGTGTCTTGAACTTCGC+AGG - chr5_2:39393601-39393620 Msa0769830:intron 55.0%
TACCCTAGTGTGGGGTTTCG+AGG - chr5_2:39394790-39394809 Msa0769830:intron 55.0%
ACCCTAGTGTGGGGTTTCGA+GGG - chr5_2:39394791-39394810 Msa0769830:intron 55.0%
TCCCTCGAAACCCCACACTA+GGG + chr5_2:39394795-39394814 None:intergenic 55.0%
! CGGCATGTTTTGCACTCCCT+GGG + chr5_2:39394936-39394955 None:intergenic 55.0%
! TCGGCATGTTTTGCACTCCC+TGG + chr5_2:39394937-39394956 None:intergenic 55.0%
AATCATACGCGCTCCTGTCG+CGG + chr5_2:39395131-39395150 None:intergenic 55.0%
AGATTGCGTAGTGCGCGAGA+TGG + chr5_2:39395423-39395442 None:intergenic 55.0%
GCCGTGAATCAGGTATCCCA+TGG + chr5_2:39396152-39396171 None:intergenic 55.0%
GCTGCATGGTCCGGATCAAT+AGG + chr5_2:39397722-39397741 None:intergenic 55.0%
TTTGTCCTTGACGCCCCATC+AGG - chr5_2:39398026-39398045 Msa0769830:intron 55.0%
GGAGGCCATGTGGCATTAGT+TGG - chr5_2:39398068-39398087 Msa0769830:intron 55.0%
CCAACCCCCAAAACGCTACA+CGG - chr5_2:39398659-39398678 Msa0769830:intron 55.0%
! GTAGCCGTGTAGCGTTTTGG+GGG + chr5_2:39398666-39398685 None:intergenic 55.0%
! GCTGTAGCCGTGTAGCGTTT+TGG + chr5_2:39398669-39398688 None:intergenic 55.0%
CCTCCCCTTCCCCTCTATTA+TGG + chr5_2:39399041-39399060 None:intergenic 55.0%
CCATAATAGAGGGGAAGGGG+AGG - chr5_2:39399038-39399057 Msa0769830:intron 55.0%
AACGGTGCGTCACATTGTGG+CGG + chr5_2:39399439-39399458 None:intergenic 55.0%
CCACAATGTGACGCACCGTT+GGG - chr5_2:39399439-39399458 Msa0769830:CDS 55.0%
GCAAAAACCTCAGCACGCCA+TGG + chr5_2:39399739-39399758 None:intergenic 55.0%
! TGGCGTGCTGAGGTTTTTGC+CGG - chr5_2:39399739-39399758 Msa0769830:intron 55.0%
! CTGAGGTTTTTGCCGGGAGT+CGG - chr5_2:39399746-39399765 Msa0769830:intron 55.0%
! TGAGGTTTTTGCCGGGAGTC+GGG - chr5_2:39399747-39399766 Msa0769830:intron 55.0%
CCATGAGGACGATCAAGGGT+GGG + chr5_2:39399781-39399800 None:intergenic 55.0%
CCACCCTTGATCGTCCTCAT+GGG - chr5_2:39399779-39399798 Msa0769830:intron 55.0%
!! GTGGAGCGTTTTGTTGGGCA+TGG - chr5_2:39400246-39400265 Msa0769830:intron 55.0%
GTATGCTCAAACTGTGCGGC+TGG + chr5_2:39401208-39401227 None:intergenic 55.0%
CCTGTGCATGATCCTCCAGA+AGG + chr5_2:39401383-39401402 None:intergenic 55.0%
! CCTTCTGGAGGATCATGCAC+AGG - chr5_2:39401380-39401399 Msa0769830:intron 55.0%
GGCCTGCTGAGATGACTATC+TGG - chr5_2:39401507-39401526 Msa0769830:CDS 55.0%
CGTAGCGGTGAAACCCTCCA+CGG + chr5_2:39393025-39393044 None:intergenic 60.0%
CGTGGAGGGTTTCACCGCTA+CGG - chr5_2:39393023-39393042 Msa0769830:intron 60.0%
GCTATAGCGGTGTGCCGTAG+CGG + chr5_2:39393040-39393059 None:intergenic 60.0%
CTCCCTCGAAACCCCACACT+AGG + chr5_2:39394796-39394815 None:intergenic 60.0%
CTAGTGTGGGGTTTCGAGGG+AGG - chr5_2:39394794-39394813 Msa0769830:intron 60.0%
GCCGCGGATGGCACATCATA+TGG + chr5_2:39395312-39395331 None:intergenic 60.0%
AAGGGCTAGAATAGCGGCCG+CGG + chr5_2:39395328-39395347 None:intergenic 60.0%
GGTGCTTATCCCTCACCCCT+TGG - chr5_2:39396075-39396094 Msa0769830:intron 60.0%
!! ACTCGGCTTGCTGCATGGTC+CGG + chr5_2:39397731-39397750 None:intergenic 60.0%
!! GCACTACTCGGCTTGCTGCA+TGG + chr5_2:39397736-39397755 None:intergenic 60.0%
TGCAGCAAGCCGAGTAGTGC+TGG - chr5_2:39397736-39397755 Msa0769830:intron 60.0%
GCAGCAAGCCGAGTAGTGCT+GGG - chr5_2:39397737-39397756 Msa0769830:intron 60.0%
!!! CCGTGTAGCGTTTTGGGGGT+TGG + chr5_2:39398662-39398681 None:intergenic 60.0%
GCCACAATGTGACGCACCGT+TGG - chr5_2:39399438-39399457 Msa0769830:CDS 60.0%
CCCAACGGTGCGTCACATTG+TGG + chr5_2:39399442-39399461 None:intergenic 60.0%
! GGCGTGCTGAGGTTTTTGCC+GGG - chr5_2:39399740-39399759 Msa0769830:intron 60.0%
! GTTTTTGCCGGGAGTCGGGA+AGG - chr5_2:39399751-39399770 Msa0769830:intron 60.0%
! GGGTTTTCCTTCCCGACTCC+CGG + chr5_2:39399761-39399780 None:intergenic 60.0%
CCCACCCTTGATCGTCCTCA+TGG - chr5_2:39399778-39399797 Msa0769830:intron 60.0%
CCCATGAGGACGATCAAGGG+TGG + chr5_2:39399782-39399801 None:intergenic 60.0%
GCCTAAGGCGTAGCCGTGGA+GGG - chr5_2:39393009-39393028 Msa0769830:intron 65.0%
ACCCTCCACGGCTACGCCTT+AGG + chr5_2:39393013-39393032 None:intergenic 65.0%
GCTAGAATAGCGGCCGCGGA+TGG + chr5_2:39395324-39395343 None:intergenic 65.0%
GGTGCGTCACATTGTGGCGG+TGG + chr5_2:39399436-39399455 None:intergenic 65.0%
GTCATCTCAGCAGGCCCCTC+TGG + chr5_2:39401503-39401522 None:intergenic 65.0%
GCAGGCCTAAGGCGTAGCCG+TGG - chr5_2:39393005-39393024 Msa0769830:intron 70.0%
GGCCTAAGGCGTAGCCGTGG+AGG - chr5_2:39393008-39393027 Msa0769830:intron 70.0%
CCTCAGCACGCCATGGGGCA+GGG + chr5_2:39399732-39399751 None:intergenic 70.0%
ACCTCAGCACGCCATGGGGC+AGG + chr5_2:39399733-39399752 None:intergenic 70.0%
CCCTGCCCCATGGCGTGCTG+AGG - chr5_2:39399729-39399748 Msa0769830:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 39391103 39401831 39391103 ID=Msa0769830;Name=Msa0769830
chr5_2 mRNA 39391103 39401831 39391103 ID=Msa0769830-mRNA-1;Parent=Msa0769830;Name=Msa0769830-mRNA-1;_AED=0.18;_eAED=0.18;_QI=24|0.69|0.78|0.78|0.92|0.85|14|459|448
chr5_2 exon 39391103 39391557 39391103 ID=Msa0769830-mRNA-1:exon:12678;Parent=Msa0769830-mRNA-1
chr5_2 exon 39391657 39391806 39391657 ID=Msa0769830-mRNA-1:exon:12677;Parent=Msa0769830-mRNA-1
chr5_2 exon 39392205 39392252 39392205 ID=Msa0769830-mRNA-1:exon:12676;Parent=Msa0769830-mRNA-1
chr5_2 exon 39392622 39392719 39392622 ID=Msa0769830-mRNA-1:exon:12675;Parent=Msa0769830-mRNA-1
chr5_2 exon 39395444 39395523 39395444 ID=Msa0769830-mRNA-1:exon:12674;Parent=Msa0769830-mRNA-1
chr5_2 exon 39395739 39395810 39395739 ID=Msa0769830-mRNA-1:exon:12673;Parent=Msa0769830-mRNA-1
chr5_2 exon 39396626 39396667 39396626 ID=Msa0769830-mRNA-1:exon:12672;Parent=Msa0769830-mRNA-1
chr5_2 exon 39396755 39396916 39396755 ID=Msa0769830-mRNA-1:exon:12671;Parent=Msa0769830-mRNA-1
chr5_2 exon 39397845 39398001 39397845 ID=Msa0769830-mRNA-1:exon:12670;Parent=Msa0769830-mRNA-1
chr5_2 exon 39398258 39398286 39398258 ID=Msa0769830-mRNA-1:exon:12669;Parent=Msa0769830-mRNA-1
chr5_2 exon 39398506 39398595 39398506 ID=Msa0769830-mRNA-1:exon:12668;Parent=Msa0769830-mRNA-1
chr5_2 exon 39399298 39399535 39399298 ID=Msa0769830-mRNA-1:exon:12667;Parent=Msa0769830-mRNA-1
chr5_2 exon 39401507 39401588 39401507 ID=Msa0769830-mRNA-1:exon:12666;Parent=Msa0769830-mRNA-1
chr5_2 exon 39401705 39401831 39401705 ID=Msa0769830-mRNA-1:exon:12665;Parent=Msa0769830-mRNA-1
chr5_2 five_prime_UTR 39401808 39401831 39401808 ID=Msa0769830-mRNA-1:five_prime_utr;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39401705 39401807 39401705 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39401507 39401588 39401507 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39399298 39399535 39399298 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39398506 39398595 39398506 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39398258 39398286 39398258 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39397845 39398001 39397845 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39396755 39396916 39396755 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39396626 39396667 39396626 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39395739 39395810 39395739 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39395444 39395523 39395444 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39392622 39392719 39392622 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39392205 39392252 39392205 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 CDS 39391661 39391806 39391661 ID=Msa0769830-mRNA-1:cds;Parent=Msa0769830-mRNA-1
chr5_2 three_prime_UTR 39391657 39391660 39391657 ID=Msa0769830-mRNA-1:three_prime_utr;Parent=Msa0769830-mRNA-1
chr5_2 three_prime_UTR 39391103 39391557 39391103 ID=Msa0769830-mRNA-1:three_prime_utr;Parent=Msa0769830-mRNA-1
Gene Sequence

>Msa0769830

ATGGCGCTCACTGCTTCACTCGGACACTCCGCATTTCTGAAACTCTCTACTTCCTTTTATGGCGACACATCACCTTCTTCTTCAATTTCTACCACGTTTCCCGGAAACCAATCATTTTCAAGAAAACAATTTGTGGTTTTTGCTCGGAAGATGTCAGGATTGGAGGAGGCCAGAAGAATCAAGAGAGAACGTGAACTTCAGGTTGTGAAGAAGGATAGAAAAGGGCCTCCATTAAGGCGTGGAAAAGTATCGCCACGTCTACCTGTCCCTGATGATATACTAAAGCCTCCTTATGTAGGCTCAGATGTACTTCCAGAAATGGGAACTGAATATCAAATTCATGATTCTGAAGGTATAGCTAAAATGAGGGCTGCAGGTGAGCTTGCAGCACGTGTCTTGAACTTCGCAGGAACTTTGGTTAGGCAGCAAGTTCTAAGTGAAGGTCGAAACGAAAAGGGATTTGTTGCATTGGTTGCACAACACGTTACTCTACTCACTGTTGGAGATTTGCTGCAAGTTTACCCAAATTTATCTGAGGCTACCCCAGGGAGTGCAAAACATGCCGATACAGAACAGTGGCTAGCCACCTCTTCATGCATCGATGCTGCACAAAATGGAGTTGTAGCCGCGTTTGCACCTACAAATCGCGTCGTATTTACTGATTGGTTTACCGGTACAAGAGCACGTATGATTTTAGGGCCTTCTGTAACAACTAATGAAATTGATAAAGCAGTGCACCAGATGATAATTGATGCTGGTGCTTATCCCTCACCCCTTGGTTATGGTGGATTTCCGAAAAGTGTATGCACATCAGTTAATGAGTGCATGTGCCATGGGATACCTGATTCACGGCAGTTACAGAATGGTGATATTATCAACATTGATGTGACAGTCTACCTGAATGGATATCATGGAGACACGTCAAAGACTTTTTTTTGTGGGGATGTCAGTGATGCAATGAAAAACCTTGTTAAGGTAACCGAAGAGTGCTTGGAGAAAGGAATAGCCGTTTGCAAAGATGGTACCCCTTTTAAGAAAATTGGAAAAAGAATCAGTGAGCATGCCGAAAAGTATGGCTACGGTGTAGTGGAGCGTTTTGTTGGGCATGGTGTTGGAACAGTGTTTCACTGTGAGCCATATATTTACCATCATCGCAATGACGAAGGAGGTTGCATGGTTGAAGGTCAAACATTTACAATTGAGCCTATTCTTTCAATGGGAAGCACTGATTGCATTACATGGCCAGATAACTGGACAACAGTTACAACTGATGGCAGTCCAGCCGCACAGTTTGAGCATACCATTCTGATAACAAGAACTGGAGCTGAAATTTTGACTACATGTTGA

Protein sequence

>Msa0769830

MALTASLGHSAFLKLSTSFYGDTSPSSSISTTFPGNQSFSRKQFVVFARKMSGLEEARRIKRERELQVVKKDRKGPPLRRGKVSPRLPVPDDILKPPYVGSDVLPEMGTEYQIHDSEGIAKMRAAGELAARVLNFAGTLVRQQVLSEGRNEKGFVALVAQHVTLLTVGDLLQVYPNLSEATPGSAKHADTEQWLATSSCIDAAQNGVVAAFAPTNRVVFTDWFTGTRARMILGPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKTFFCGDVSDAMKNLVKVTEECLEKGIAVCKDGTPFKKIGKRISEHAEKYGYGVVERFVGHGVGTVFHCEPYIYHHRNDEGGCMVEGQTFTIEPILSMGSTDCITWPDNWTTVTTDGSPAAQFEHTILITRTGAEILTTC*