Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069960 | XP_003624498.1 | 97.222 | 144 | 4 | 0 | 1 | 144 | 1 | 144 | 7.64e-99 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069960 | sp|Q96500|LIRP1_ARATH | 48.611 | 144 | 65 | 4 | 1 | 141 | 1 | 138 | 6.66e-32 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069960 | B7FGR7 | 97.222 | 144 | 4 | 0 | 1 | 144 | 1 | 144 | 3.65e-99 | 290 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043680 | Msa1069960 | 0.821466 | 3.977895e-53 | -8.615850e-47 |
| Msa0043940 | Msa1069960 | 0.862937 | 3.556298e-64 | -8.615850e-47 |
| Msa0064550 | Msa1069960 | 0.812093 | 5.043180e-51 | -8.615850e-47 |
| Msa0079770 | Msa1069960 | 0.809440 | 1.889938e-50 | -8.615850e-47 |
| Msa0084630 | Msa1069960 | 0.841972 | 3.435407e-58 | -8.615850e-47 |
| Msa0084680 | Msa1069960 | 0.803847 | 2.867773e-49 | -8.615850e-47 |
| Msa0089510 | Msa1069960 | 0.823895 | 1.082909e-53 | -8.615850e-47 |
| Msa0089520 | Msa1069960 | 0.825088 | 5.671523e-54 | -8.615850e-47 |
| Msa0092660 | Msa1069960 | 0.834769 | 2.475054e-56 | -8.615850e-47 |
| Msa0092680 | Msa1069960 | 0.830025 | 3.704702e-55 | -8.615850e-47 |
| Msa0092710 | Msa1069960 | 0.857236 | 1.872431e-62 | -8.615850e-47 |
| Msa0092730 | Msa1069960 | 0.836508 | 8.981023e-57 | -8.615850e-47 |
| Msa0103160 | Msa1069960 | 0.810165 | 1.320065e-50 | -8.615850e-47 |
| Msa0109490 | Msa1069960 | 0.802015 | 6.856398e-49 | -8.615850e-47 |
| Msa0604700 | Msa1069960 | 0.805679 | 1.188283e-49 | -8.615850e-47 |
| Msa0604880 | Msa1069960 | 0.827204 | 1.779773e-54 | -8.615850e-47 |
| Msa0605250 | Msa1069960 | 0.805192 | 1.503423e-49 | -8.615850e-47 |
| Msa0609790 | Msa1069960 | 0.864777 | 9.528086e-65 | -8.615850e-47 |
| Msa0627050 | Msa1069960 | 0.840685 | 7.491625e-58 | -8.615850e-47 |
| Msa0629500 | Msa1069960 | 0.810714 | 1.004943e-50 | -8.615850e-47 |
| Msa0636720 | Msa1069960 | 0.863885 | 1.808329e-64 | -8.615850e-47 |
| Msa0644630 | Msa1069960 | 0.813894 | 2.031061e-51 | -8.615850e-47 |
| Msa0645820 | Msa1069960 | 0.813893 | 2.032503e-51 | -8.615850e-47 |
| Msa0646190 | Msa1069960 | 0.852893 | 3.422408e-61 | -8.615850e-47 |
| Msa0649310 | Msa1069960 | 0.802139 | 6.463973e-49 | -8.615850e-47 |
| Msa0649380 | Msa1069960 | 0.814750 | 1.314277e-51 | -8.615850e-47 |
| Msa0649420 | Msa1069960 | 0.817614 | 3.009050e-52 | -8.615850e-47 |
| Msa0667970 | Msa1069960 | 0.841413 | 4.823457e-58 | -8.615850e-47 |
| Msa0675010 | Msa1069960 | 0.800644 | 1.308520e-48 | -8.615850e-47 |
| Msa0681210 | Msa1069960 | 0.801919 | 7.172799e-49 | -8.615850e-47 |
| Msa0698600 | Msa1069960 | 0.816330 | 5.844972e-52 | -8.615850e-47 |
| Msa0703760 | Msa1069960 | 0.802048 | 6.748830e-49 | -8.615850e-47 |
| Msa0704220 | Msa1069960 | 0.849696 | 2.740362e-60 | -8.615850e-47 |
| Msa0720270 | Msa1069960 | 0.808926 | 2.435494e-50 | -8.615850e-47 |
| Msa0729550 | Msa1069960 | 0.827837 | 1.254640e-54 | -8.615850e-47 |
| Msa0738870 | Msa1069960 | 0.828961 | 6.717867e-55 | -8.615850e-47 |
| Msa0738880 | Msa1069960 | 0.875210 | 3.687909e-68 | -8.615850e-47 |
| Msa0742160 | Msa1069960 | 0.817190 | 3.749740e-52 | -8.615850e-47 |
| Msa0760890 | Msa1069960 | 0.814391 | 1.577599e-51 | -8.615850e-47 |
| Msa0769830 | Msa1069960 | 0.857547 | 1.515761e-62 | -8.615850e-47 |
| Msa0780140 | Msa1069960 | 0.800237 | 1.583864e-48 | -8.615850e-47 |
| Msa0783280 | Msa1069960 | 0.806521 | 7.902126e-50 | -8.615850e-47 |
| Msa0793090 | Msa1069960 | 0.814696 | 1.350656e-51 | -8.615850e-47 |
| Msa0802210 | Msa1069960 | 0.808647 | 2.794687e-50 | -8.615850e-47 |
| Msa0806720 | Msa1069960 | 0.884705 | 1.525635e-71 | -8.615850e-47 |
| Msa0806760 | Msa1069960 | 0.884703 | 1.529214e-71 | -8.615850e-47 |
| Msa0809300 | Msa1069960 | 0.813061 | 3.096859e-51 | -8.615850e-47 |
| Msa0810370 | Msa1069960 | 0.816001 | 6.925867e-52 | -8.615850e-47 |
| Msa0819320 | Msa1069960 | 0.876837 | 1.016376e-68 | -8.615850e-47 |
| Msa0819330 | Msa1069960 | 0.837486 | 5.052195e-57 | -8.615850e-47 |
| Msa0819360 | Msa1069960 | 0.801854 | 7.398135e-49 | -8.615850e-47 |
| Msa0819370 | Msa1069960 | 0.875476 | 2.991390e-68 | -8.615850e-47 |
| Msa0838660 | Msa1069960 | 0.807218 | 5.626847e-50 | -8.615850e-47 |
| Msa0124660 | Msa1069960 | 0.805368 | 1.380733e-49 | -8.615850e-47 |
| Msa0130760 | Msa1069960 | 0.808681 | 2.748438e-50 | -8.615850e-47 |
| Msa0137600 | Msa1069960 | 0.836012 | 1.200763e-56 | -8.615850e-47 |
| Msa0140290 | Msa1069960 | 0.814771 | 1.300416e-51 | -8.615850e-47 |
| Msa0150210 | Msa1069960 | 0.814240 | 1.703765e-51 | -8.615850e-47 |
| Msa0154240 | Msa1069960 | 0.811231 | 7.762284e-51 | -8.615850e-47 |
| Msa0154270 | Msa1069960 | 0.820326 | 7.276050e-53 | -8.615850e-47 |
| Msa0155610 | Msa1069960 | 0.801779 | 7.664966e-49 | -8.615850e-47 |
| Msa0170040 | Msa1069960 | 0.802433 | 5.623438e-49 | -8.615850e-47 |
| Msa0171920 | Msa1069960 | 0.841485 | 4.617112e-58 | -8.615850e-47 |
| Msa0178940 | Msa1069960 | 0.837798 | 4.201739e-57 | -8.615850e-47 |
| Msa0182640 | Msa1069960 | 0.840167 | 1.023749e-57 | -8.615850e-47 |
| Msa0197030 | Msa1069960 | 0.813496 | 2.485920e-51 | -8.615850e-47 |
| Msa0199740 | Msa1069960 | 0.810638 | 1.043284e-50 | -8.615850e-47 |
| Msa0206940 | Msa1069960 | 0.806132 | 9.543610e-50 | -8.615850e-47 |
| Msa0216210 | Msa1069960 | 0.815539 | 8.778579e-52 | -8.615850e-47 |
| Msa0218530 | Msa1069960 | -0.814250 | 1.694972e-51 | -8.615850e-47 |
| Msa0218650 | Msa1069960 | -0.833788 | 4.360306e-56 | -8.615850e-47 |
| Msa0367370 | Msa1069960 | 0.823865 | 1.100107e-53 | -8.615850e-47 |
| Msa0368430 | Msa1069960 | 0.816698 | 4.836623e-52 | -8.615850e-47 |
| Msa0380650 | Msa1069960 | 0.832652 | 8.367984e-56 | -8.615850e-47 |
| Msa0382500 | Msa1069960 | 0.809214 | 2.113843e-50 | -8.615850e-47 |
| Msa0382590 | Msa1069960 | 0.862584 | 4.568429e-64 | -8.615850e-47 |
| Msa0387790 | Msa1069960 | 0.801622 | 8.254559e-49 | -8.615850e-47 |
| Msa0387970 | Msa1069960 | 0.840668 | 7.572021e-58 | -8.615850e-47 |
| Msa0392050 | Msa1069960 | 0.864691 | 1.013766e-64 | -8.615850e-47 |
| Msa0392540 | Msa1069960 | 0.814168 | 1.767676e-51 | -8.615850e-47 |
| Msa0401340 | Msa1069960 | 0.819861 | 9.298235e-53 | -8.615850e-47 |
| Msa0411560 | Msa1069960 | 0.801198 | 1.008289e-48 | -8.615850e-47 |
| Msa0425810 | Msa1069960 | 0.814810 | 1.274355e-51 | -8.615850e-47 |
| Msa0430290 | Msa1069960 | 0.832260 | 1.045994e-55 | -8.615850e-47 |
| Msa0432680 | Msa1069960 | 0.804183 | 2.440860e-49 | -8.615850e-47 |
| Msa0432720 | Msa1069960 | 0.896924 | 2.311531e-76 | -8.615850e-47 |
| Msa0437780 | Msa1069960 | 0.824382 | 8.318548e-54 | -8.615850e-47 |
| Msa0440310 | Msa1069960 | 0.823968 | 1.040910e-53 | -8.615850e-47 |
| Msa0448120 | Msa1069960 | 0.806639 | 7.461251e-50 | -8.615850e-47 |
| Msa0469950 | Msa1069960 | 0.864894 | 8.754015e-65 | -8.615850e-47 |
| Msa0472270 | Msa1069960 | 0.868509 | 6.195636e-66 | -8.615850e-47 |
| Msa0472570 | Msa1069960 | 0.807298 | 5.412183e-50 | -8.615850e-47 |
| Msa0480150 | Msa1069960 | 0.827563 | 1.460099e-54 | -8.615850e-47 |
| Msa0481490 | Msa1069960 | 0.833153 | 6.281753e-56 | -8.615850e-47 |
| Msa0984000 | Msa1069960 | 0.837325 | 5.554932e-57 | -8.615850e-47 |
| Msa1027790 | Msa1069960 | 0.813128 | 2.993773e-51 | -8.615850e-47 |
| Msa1030870 | Msa1069960 | 0.927066 | 1.971965e-91 | -8.615850e-47 |
| Msa1034930 | Msa1069960 | 0.812553 | 4.001434e-51 | -8.615850e-47 |
| Msa1069960 | Msa1079480 | 0.801882 | 7.302043e-49 | -8.615850e-47 |
| Msa1069960 | Msa1080620 | 0.856187 | 3.811916e-62 | -8.615850e-47 |
| Msa1069960 | Msa1080690 | 0.854995 | 8.490583e-62 | -8.615850e-47 |
| Msa1069960 | Msa1082150 | 0.818899 | 1.540922e-52 | -8.615850e-47 |
| Msa1069960 | Msa1083460 | 0.815460 | 9.140388e-52 | -8.615850e-47 |
| Msa1069960 | Msa1106580 | 0.831649 | 1.480643e-55 | -8.615850e-47 |
| Msa1069960 | Msa1112610 | 0.800608 | 1.330758e-48 | -8.615850e-47 |
| Msa1069960 | Msa1118460 | 0.828134 | 1.064094e-54 | -8.615850e-47 |
| Msa1069960 | Msa1118980 | 0.800291 | 1.544176e-48 | -8.615850e-47 |
| Msa1069960 | Msa1119860 | 0.987313 | 8.252783e-170 | -8.615850e-47 |
| Msa1069960 | Msa1126310 | 0.829410 | 5.227390e-55 | -8.615850e-47 |
| Msa1069960 | Msa1136550 | 0.817785 | 2.753797e-52 | -8.615850e-47 |
| Msa1069960 | Msa1144730 | 0.865657 | 5.037922e-65 | -8.615850e-47 |
| Msa1069960 | Msa1144950 | 0.887704 | 1.129537e-72 | -8.615850e-47 |
| Msa1069960 | Msa1149960 | 0.805761 | 1.141915e-49 | -8.615850e-47 |
| Msa1069960 | Msa1157730 | 0.877614 | 5.457831e-69 | -8.615850e-47 |
| Msa1069960 | Msa1167160 | 0.836929 | 7.016515e-57 | -8.615850e-47 |
| Msa1069960 | Msa1173380 | 0.828833 | 7.216690e-55 | -8.615850e-47 |
| Msa1069960 | Msa1177240 | 0.800726 | 1.258969e-48 | -8.615850e-47 |
| Msa1069960 | Msa1197110 | 0.812700 | 3.715038e-51 | -8.615850e-47 |
| Msa1069960 | Msa1222580 | 0.806559 | 7.757548e-50 | -8.615850e-47 |
| Msa1069960 | Msa1229640 | 0.803883 | 2.818140e-49 | -8.615850e-47 |
| Msa1069960 | Msa1231260 | 0.804998 | 1.650202e-49 | -8.615850e-47 |
| Msa1069960 | Msa1238730 | 0.812629 | 3.851301e-51 | -8.615850e-47 |
| Msa1069960 | Msa1258940 | 0.802682 | 4.996506e-49 | -8.615850e-47 |
| Msa1069960 | Msa1264560 | 0.805175 | 1.515351e-49 | -8.615850e-47 |
| Msa1069960 | Msa1279700 | 0.819130 | 1.364705e-52 | -8.615850e-47 |
| Msa1069960 | Msa1281270 | 0.828417 | 9.094881e-55 | -8.615850e-47 |
| Msa1069960 | Msa1293050 | 0.856098 | 4.047303e-62 | -8.615850e-47 |
| Msa1069960 | Msa1305650 | 0.800441 | 1.438960e-48 | -8.615850e-47 |
| Msa1069960 | Msa1306200 | 0.818241 | 2.172488e-52 | -8.615850e-47 |
| Msa1069960 | Msa1317600 | 0.819732 | 9.953095e-53 | -8.615850e-47 |
| Msa1069960 | Msa1320380 | 0.838992 | 2.068359e-57 | -8.615850e-47 |
| Msa1069960 | Msa1349810 | 0.806770 | 7.001308e-50 | -8.615850e-47 |
| Msa1069960 | Msa1354090 | 0.831362 | 1.742274e-55 | -8.615850e-47 |
| Msa1069960 | Msa1358340 | 0.813383 | 2.631521e-51 | -8.615850e-47 |
| Msa1069960 | Msa1359890 | 0.831575 | 1.544058e-55 | -8.615850e-47 |
| Msa1069960 | Msa1373380 | 0.830529 | 2.790527e-55 | -8.615850e-47 |
| Msa1069960 | Msa1394900 | 0.841372 | 4.944999e-58 | -8.615850e-47 |
| Msa1069960 | Msa1405770 | 0.818303 | 2.103416e-52 | -8.615850e-47 |
| Msa1069960 | Msa1406020 | 0.838935 | 2.139444e-57 | -8.615850e-47 |
| Msa1069960 | Msa1406880 | 0.802135 | 6.477979e-49 | -8.615850e-47 |
| Msa1069960 | Msa1411830 | 0.873198 | 1.770077e-67 | -8.615850e-47 |
| Msa1069960 | Msa1412520 | 0.835242 | 1.881112e-56 | -8.615850e-47 |
| Msa1069960 | Msa1418600 | 0.803758 | 2.992524e-49 | -8.615850e-47 |
| Msa1069960 | Msa1422890 | 0.813661 | 2.285707e-51 | -8.615850e-47 |
| Msa1069960 | Msa1423190 | 0.815881 | 7.364655e-52 | -8.615850e-47 |
| Msa1069960 | Msa1430760 | 0.816399 | 5.642063e-52 | -8.615850e-47 |
| Msa1069960 | Msa1434020 | 0.808884 | 2.486405e-50 | -8.615850e-47 |
| Msa1069960 | Msa1434660 | 0.835711 | 1.431408e-56 | -8.615850e-47 |
| Msa1069960 | Msa1437320 | 0.804032 | 2.624925e-49 | -8.615850e-47 |
| Msa1069960 | Msa1439120 | 0.869123 | 3.917823e-66 | -8.615850e-47 |
| Msa1069960 | Msa1440220 | 0.853094 | 2.998947e-61 | -8.615850e-47 |
| Msa1069960 | Msa1455660 | 0.868016 | 8.925988e-66 | -8.615850e-47 |
| Msa1069960 | Msa1459540 | 0.817691 | 2.892014e-52 | -8.615850e-47 |
| Msa1069960 | Msa1466350 | 0.800947 | 1.134901e-48 | -8.615850e-47 |
| Msa0240640 | Msa1069960 | 0.811284 | 7.560082e-51 | -8.615850e-47 |
| Msa0242290 | Msa1069960 | 0.834976 | 2.194362e-56 | -8.615850e-47 |
| Msa0260190 | Msa1069960 | 0.835809 | 1.351683e-56 | -8.615850e-47 |
| Msa0265580 | Msa1069960 | 0.800778 | 1.228788e-48 | -8.615850e-47 |
| Msa0280140 | Msa1069960 | 0.827478 | 1.530116e-54 | -8.615850e-47 |
| Msa0280500 | Msa1069960 | 0.810438 | 1.152701e-50 | -8.615850e-47 |
| Msa0295570 | Msa1069960 | 0.845359 | 4.264881e-59 | -8.615850e-47 |
| Msa0295730 | Msa1069960 | 0.803783 | 2.956700e-49 | -8.615850e-47 |
| Msa0296000 | Msa1069960 | 0.836301 | 1.013902e-56 | -8.615850e-47 |
| Msa0297370 | Msa1069960 | -0.807549 | 4.787182e-50 | -8.615850e-47 |
| Msa0303440 | Msa1069960 | 0.808171 | 3.530032e-50 | -8.615850e-47 |
| Msa0319970 | Msa1069960 | 0.800242 | 1.579664e-48 | -8.615850e-47 |
| Msa0323990 | Msa1069960 | 0.821199 | 4.584123e-53 | -8.615850e-47 |
| Msa0333900 | Msa1069960 | 0.822976 | 1.775998e-53 | -8.615850e-47 |
| Msa0334020 | Msa1069960 | 0.830731 | 2.489481e-55 | -8.615850e-47 |
| Msa0334280 | Msa1069960 | 0.801781 | 7.656049e-49 | -8.615850e-47 |
| Msa0334980 | Msa1069960 | 0.827857 | 1.241155e-54 | -8.615850e-47 |
| Msa0342620 | Msa1069960 | 0.801048 | 1.082196e-48 | -8.615850e-47 |
| Msa0344680 | Msa1069960 | 0.866119 | 3.599236e-65 | -8.615850e-47 |
| Msa0346790 | Msa1069960 | 0.838833 | 2.274121e-57 | -8.615850e-47 |
| Msa0354390 | Msa1069960 | 0.818584 | 1.815880e-52 | -8.615850e-47 |
| Msa0485280 | Msa1069960 | 0.800019 | 1.753475e-48 | -8.615850e-47 |
| Msa0486530 | Msa1069960 | 0.802379 | 5.768053e-49 | -8.615850e-47 |
| Msa0487490 | Msa1069960 | 0.815765 | 7.817603e-52 | -8.615850e-47 |
| Msa0512310 | Msa1069960 | 0.808034 | 3.776947e-50 | -8.615850e-47 |
| Msa0525270 | Msa1069960 | 0.903459 | 3.394526e-79 | -8.615850e-47 |
| Msa0525280 | Msa1069960 | 0.901551 | 2.390405e-78 | -8.615850e-47 |
| Msa0530340 | Msa1069960 | 0.825551 | 4.407575e-54 | -8.615850e-47 |
| Msa0532840 | Msa1069960 | 0.811647 | 6.304311e-51 | -8.615850e-47 |
| Msa0533010 | Msa1069960 | 0.807410 | 5.124395e-50 | -8.615850e-47 |
| Msa0548210 | Msa1069960 | 0.826159 | 3.160335e-54 | -8.615850e-47 |
| Msa0549540 | Msa1069960 | 0.844192 | 8.801919e-59 | -8.615850e-47 |
| Msa0549760 | Msa1069960 | 0.812686 | 3.741952e-51 | -8.615850e-47 |
| Msa0587900 | Msa1069960 | 0.808308 | 3.301544e-50 | -8.615850e-47 |
| Msa0589290 | Msa1069960 | 0.813992 | 1.932387e-51 | -8.615850e-47 |
| Msa0589640 | Msa1069960 | 0.801142 | 1.035215e-48 | -8.615850e-47 |
| Msa0848760 | Msa1069960 | 0.858658 | 7.081166e-63 | -8.615850e-47 |
| Msa0859520 | Msa1069960 | 0.807707 | 4.431510e-50 | -8.615850e-47 |
| Msa0862290 | Msa1069960 | 0.813255 | 2.808180e-51 | -8.615850e-47 |
| Msa0882700 | Msa1069960 | 0.875732 | 2.442568e-68 | -8.615850e-47 |
| Msa0929940 | Msa1069960 | 0.859589 | 3.724694e-63 | -8.615850e-47 |
| Msa0944690 | Msa1069960 | 0.858118 | 1.025761e-62 | -8.615850e-47 |
| Msa0945960 | Msa1069960 | 0.878726 | 2.224597e-69 | -8.615850e-47 |
| Msa0968780 | Msa1069960 | 0.820838 | 5.552508e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069960 | MtrunA17_Chr7g0252111 | 97.222 | 144 | 4 | 0 | 1 | 144 | 1 | 144 | 7.03e-103 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069960 | AT3G26740.1 | 48.611 | 144 | 65 | 4 | 1 | 141 | 1 | 138 | 6.77e-33 | 113 |
Find 73 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTCTTTGGTGTTGTTAA+AGG | 0.206963 | 7_2:+65815576 | None:intergenic |
| AAGCAAAGAAACTTATATTA+AGG | 0.269919 | 7_2:-65814411 | Msa1069960:three_prime_UTR |
| TGAGATGAATTAATCTTCTA+AGG | 0.271083 | 7_2:+65815666 | None:intergenic |
| GGTGTATCATTCCTTGCTTC+AGG | 0.283991 | 7_2:+65814841 | None:intergenic |
| TCAGGCTGCAGCTTGACTTC+AGG | 0.292025 | 7_2:+65814859 | None:intergenic |
| CTTATATTAAGGTAATATAA+TGG | 0.305318 | 7_2:-65814400 | Msa1069960:three_prime_UTR |
| CAAGCCTCCACGCCTATATA+AGG | 0.310017 | 7_2:+65814167 | None:intergenic |
| ATTAATCTTCTAAGGAAGTT+TGG | 0.317438 | 7_2:+65815674 | None:intergenic |
| AGAACGTGAGGCAATCAATT+TGG | 0.330098 | 7_2:+65815521 | None:intergenic |
| ATCTATCTCCCAAGACAAAA+AGG | 0.330799 | 7_2:-65815771 | Msa1069960:five_prime_UTR |
| TTCCCTGAAGCTGCAGTCTT+TGG | 0.331736 | 7_2:+65814820 | None:intergenic |
| ACACCAAAGACTGCAGCTTC+AGG | 0.337411 | 7_2:-65814823 | Msa1069960:CDS |
| TTGGTTTCAATTTATAGAAT+AGG | 0.339929 | 7_2:+65815693 | None:intergenic |
| GATATTTAGTATTGAGGATA+AGG | 0.355902 | 7_2:+65815745 | None:intergenic |
| GGTTGGAGGGGATGCTTGTT+TGG | 0.357304 | 7_2:-65814893 | Msa1069960:CDS |
| ATAGCGAAATCTTACGTCTT+AGG | 0.366730 | 7_2:+65814766 | None:intergenic |
| TCAATTTATAGAATAGGAAT+AGG | 0.376737 | 7_2:+65815699 | None:intergenic |
| TGCTCATGGTGCGGCCGAGC+TGG | 0.391083 | 7_2:-65814323 | Msa1069960:three_prime_UTR |
| TTATATTAAGGTAATATAAT+GGG | 0.396868 | 7_2:-65814399 | Msa1069960:three_prime_UTR |
| ATCTCATCCATTACAATGAT+AGG | 0.399298 | 7_2:-65815725 | Msa1069960:five_prime_UTR |
| CTGTGAGCCTGATTATCAAA+AGG | 0.404528 | 7_2:-65814606 | Msa1069960:CDS |
| GAAGATTAATTCATCTCAAA+AGG | 0.416071 | 7_2:-65815661 | Msa1069960:five_prime_UTR |
| ATGAGGAATCACCCTTATAT+AGG | 0.441104 | 7_2:-65814179 | Msa1069960:three_prime_UTR |
| ACCGTTTCACATGCCTCAGC+TGG | 0.450987 | 7_2:+65814913 | None:intergenic |
| TGGAGTGCTAACGCACTTGT+AGG | 0.459639 | 7_2:+65814274 | None:intergenic |
| GCAGAGGCTTGTGATGATCT+TGG | 0.462484 | 7_2:-65814638 | Msa1069960:CDS |
| GCAAGATGTGAAACACTCTT+TGG | 0.470394 | 7_2:+65815564 | None:intergenic |
| CACCAAAGACTGCAGCTTCA+GGG | 0.489453 | 7_2:-65814822 | Msa1069960:CDS |
| GGATGAGATATTTAGTATTG+AGG | 0.491448 | 7_2:+65815739 | None:intergenic |
| AAGCCTCCACGCCTATATAA+GGG | 0.498989 | 7_2:+65814168 | None:intergenic |
| TCTTGGGAGATAGATTGTCC+TGG | 0.500035 | 7_2:+65815779 | None:intergenic |
| GATCATCACAAGCCTCTGCT+TGG | 0.508891 | 7_2:+65814642 | None:intergenic |
| TGTGAGCCTGATTATCAAAA+GGG | 0.510012 | 7_2:-65814605 | Msa1069960:CDS |
| TAGGACACCTATCATTGTAA+TGG | 0.518462 | 7_2:+65815718 | None:intergenic |
| TCACATTCTGACTTGAGCGT+TGG | 0.521901 | 7_2:+65814254 | None:intergenic |
| TGTTGAAGGATCAGAGTTGT+CGG | 0.523519 | 7_2:+65815464 | None:intergenic |
| CAATAGCCAAGGCAATAAGA+AGG | 0.530752 | 7_2:+65814558 | None:intergenic |
| CACAAAGGTAGTGGCTGCAA+AGG | 0.538246 | 7_2:+65815599 | None:intergenic |
| CAGCTTCAGGGAACATTGAG+AGG | 0.539207 | 7_2:-65814810 | Msa1069960:CDS |
| CGTGAGGCAATCAATTTGGT+AGG | 0.539328 | 7_2:+65815525 | None:intergenic |
| TGTTAAAGGCACAAAGGTAG+TGG | 0.548610 | 7_2:+65815590 | None:intergenic |
| TCCAGCTGAGGCATGTGAAA+CGG | 0.549406 | 7_2:-65814914 | Msa1069960:CDS |
| CGAGCTGGTGATTCCACGGT+GGG | 0.552818 | 7_2:-65814308 | Msa1069960:three_prime_UTR |
| GAATTGTAATCAACTGTTGA+AGG | 0.559497 | 7_2:+65815450 | None:intergenic |
| AGGCATGTGAAACGGTTGGA+GGG | 0.565003 | 7_2:-65814906 | Msa1069960:CDS |
| GCTGAGGCATGTGAAACGGT+TGG | 0.574341 | 7_2:-65814910 | Msa1069960:CDS |
| CGGCCGAGCTGGTGATTCCA+CGG | 0.575516 | 7_2:-65814312 | Msa1069960:three_prime_UTR |
| TGAAAGTGAATCGTACCTCA+AGG | 0.577488 | 7_2:-65814205 | Msa1069960:three_prime_UTR |
| TGTCAGAGTGTTTCCAGCTG+AGG | 0.580476 | 7_2:-65814926 | Msa1069960:intron |
| CTCAAGTCAGAATGTGAATG+AGG | 0.587565 | 7_2:-65814248 | Msa1069960:three_prime_UTR |
| AAAAGCACAGGCAATACAGA+TGG | 0.589617 | 7_2:-65814347 | Msa1069960:three_prime_UTR |
| GAGGCATGTGAAACGGTTGG+AGG | 0.591598 | 7_2:-65814907 | Msa1069960:CDS |
| TCAAGCTGCAGCCTGAAGCA+AGG | 0.602199 | 7_2:-65814852 | Msa1069960:CDS |
| GAGGCTTGTGATGATCTTGG+AGG | 0.607345 | 7_2:-65814635 | Msa1069960:CDS |
| GGCATGTGAAACGGTTGGAG+GGG | 0.610004 | 7_2:-65814905 | Msa1069960:CDS |
| GTTGTAAGCTTCAATAGCCA+AGG | 0.612595 | 7_2:+65814547 | None:intergenic |
| GAAAGTGAATCGTACCTCAA+GGG | 0.620943 | 7_2:-65814204 | Msa1069960:three_prime_UTR |
| ATCGTACCTCAAGGGTGATG+AGG | 0.621997 | 7_2:-65814196 | Msa1069960:three_prime_UTR |
| AATTATAAGAACAAAAGCAC+AGG | 0.624477 | 7_2:-65814359 | Msa1069960:three_prime_UTR |
| GAATCACCCTTATATAGGCG+TGG | 0.629924 | 7_2:-65814174 | Msa1069960:three_prime_UTR |
| GTGAGGCAATCAATTTGGTA+GGG | 0.637953 | 7_2:+65815526 | None:intergenic |
| GTGATTCCTCATCACCCTTG+AGG | 0.642155 | 7_2:+65814190 | None:intergenic |
| GCAATACAGATGGATGCTCA+TGG | 0.643896 | 7_2:-65814337 | Msa1069960:three_prime_UTR |
| TGGTGTTGTTAAAGGCACAA+AGG | 0.647032 | 7_2:+65815584 | None:intergenic |
| AGCTTCAGGGAACATTGAGA+GGG | 0.650830 | 7_2:-65814809 | Msa1069960:CDS |
| ACAGATGGATGCTCATGGTG+CGG | 0.651596 | 7_2:-65814332 | Msa1069960:three_prime_UTR |
| CCACCGTGGAATCACCAGCT+CGG | 0.654741 | 7_2:+65814309 | None:intergenic |
| AAGTCAGAATGTGAATGAGG+TGG | 0.672114 | 7_2:-65814245 | Msa1069960:three_prime_UTR |
| GCGAGGTGAAGAAGAACGTG+AGG | 0.676435 | 7_2:+65815509 | None:intergenic |
| AGGTGGTTAAGCATAATGCA+AGG | 0.686256 | 7_2:-65814228 | Msa1069960:three_prime_UTR |
| ACTTTGATTGCAGTGTAGCG+AGG | 0.698323 | 7_2:+65815492 | None:intergenic |
| CCGAGCTGGTGATTCCACGG+TGG | 0.699711 | 7_2:-65814309 | Msa1069960:three_prime_UTR |
| TCACCCTTATATAGGCGTGG+AGG | 0.712097 | 7_2:-65814171 | Msa1069960:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATATTTATAACCTT+AGG | - | chr7_2:65814598-65814617 | Msa1069960:CDS | 10.0% |
| !! | TTATATTAAGGTAATATAAT+GGG | - | chr7_2:65815531-65815550 | Msa1069960:CDS | 10.0% |
| !! | TATATTATATTTATAACCTT+AGG | - | chr7_2:65814598-65814617 | Msa1069960:CDS | 10.0% |
| !! | TTATATTAAGGTAATATAAT+GGG | - | chr7_2:65815531-65815550 | Msa1069960:CDS | 10.0% |
| !! | AACTAAACTAAAATGAATTA+AGG | + | chr7_2:65814536-65814555 | None:intergenic | 15.0% |
| !!! | AATTCATTTTAGTTTAGTTT+AGG | - | chr7_2:65814537-65814556 | Msa1069960:three_prime_UTR | 15.0% |
| !! | CTTATATTAAGGTAATATAA+TGG | - | chr7_2:65815530-65815549 | Msa1069960:CDS | 15.0% |
| !! | AACTAAACTAAAATGAATTA+AGG | + | chr7_2:65814536-65814555 | None:intergenic | 15.0% |
| !!! | AATTCATTTTAGTTTAGTTT+AGG | - | chr7_2:65814537-65814556 | Msa1069960:three_prime_UTR | 15.0% |
| !! | CTTATATTAAGGTAATATAA+TGG | - | chr7_2:65815530-65815549 | Msa1069960:CDS | 15.0% |
| !! | TCAATTTATAGAATAGGAAT+AGG | + | chr7_2:65814234-65814253 | None:intergenic | 20.0% |
| !! | TTGGTTTCAATTTATAGAAT+AGG | + | chr7_2:65814240-65814259 | None:intergenic | 20.0% |
| !!! | TAGTATATTATTAGTTTCCA+TGG | - | chr7_2:65814668-65814687 | Msa1069960:intron | 20.0% |
| !!! | ATCTCTATAAGTTATTCTTT+TGG | - | chr7_2:65814897-65814916 | Msa1069960:CDS | 20.0% |
| !! | AATAACACAAACAAATGTTA+TGG | + | chr7_2:65814978-65814997 | None:intergenic | 20.0% |
| !! | AAGCAAAGAAACTTATATTA+AGG | - | chr7_2:65815519-65815538 | Msa1069960:CDS | 20.0% |
| !! | TCAATTTATAGAATAGGAAT+AGG | + | chr7_2:65814234-65814253 | None:intergenic | 20.0% |
| !! | TTGGTTTCAATTTATAGAAT+AGG | + | chr7_2:65814240-65814259 | None:intergenic | 20.0% |
| !!! | TAGTATATTATTAGTTTCCA+TGG | - | chr7_2:65814668-65814687 | Msa1069960:intron | 20.0% |
| !!! | ATCTCTATAAGTTATTCTTT+TGG | - | chr7_2:65814897-65814916 | Msa1069960:CDS | 20.0% |
| !! | AATAACACAAACAAATGTTA+TGG | + | chr7_2:65814978-65814997 | None:intergenic | 20.0% |
| !! | AAGCAAAGAAACTTATATTA+AGG | - | chr7_2:65815519-65815538 | Msa1069960:CDS | 20.0% |
| !! | GATATTTAGTATTGAGGATA+AGG | + | chr7_2:65814188-65814207 | None:intergenic | 25.0% |
| !! | ATTAATCTTCTAAGGAAGTT+TGG | + | chr7_2:65814259-65814278 | None:intergenic | 25.0% |
| ! | TGAGATGAATTAATCTTCTA+AGG | + | chr7_2:65814267-65814286 | None:intergenic | 25.0% |
| ! | GAAGATTAATTCATCTCAAA+AGG | - | chr7_2:65814269-65814288 | Msa1069960:three_prime_UTR | 25.0% |
| !!! | AGTTTAGTTTAGGTTTTCTT+AGG | - | chr7_2:65814547-65814566 | Msa1069960:three_prime_UTR | 25.0% |
| !! | TATTATTAGTTTCCATGGTA+TGG | - | chr7_2:65814673-65814692 | Msa1069960:intron | 25.0% |
| ! | TAGCTAAAAAAAACCATTGA+AGG | + | chr7_2:65814720-65814739 | None:intergenic | 25.0% |
| !!! | GACTTTTAGAATTTTGTTTC+AGG | - | chr7_2:65814919-65814938 | Msa1069960:CDS | 25.0% |
| !! | TTTGTTTCAGGACTAAATTT+TGG | - | chr7_2:65814931-65814950 | Msa1069960:intron | 25.0% |
| ! | ATCAGAATTGTGATGTTAAA+TGG | - | chr7_2:65815242-65815261 | Msa1069960:intron | 25.0% |
| !! | GTGCTTTTGTTCTTATAATT+GGG | + | chr7_2:65815571-65815590 | None:intergenic | 25.0% |
| !! | TGTGCTTTTGTTCTTATAAT+TGG | + | chr7_2:65815572-65815591 | None:intergenic | 25.0% |
| !! | AATTATAAGAACAAAAGCAC+AGG | - | chr7_2:65815571-65815590 | Msa1069960:CDS | 25.0% |
| !! | GATATTTAGTATTGAGGATA+AGG | + | chr7_2:65814188-65814207 | None:intergenic | 25.0% |
| !! | ATTAATCTTCTAAGGAAGTT+TGG | + | chr7_2:65814259-65814278 | None:intergenic | 25.0% |
| ! | TGAGATGAATTAATCTTCTA+AGG | + | chr7_2:65814267-65814286 | None:intergenic | 25.0% |
| ! | GAAGATTAATTCATCTCAAA+AGG | - | chr7_2:65814269-65814288 | Msa1069960:three_prime_UTR | 25.0% |
| !!! | AGTTTAGTTTAGGTTTTCTT+AGG | - | chr7_2:65814547-65814566 | Msa1069960:three_prime_UTR | 25.0% |
| !! | TATTATTAGTTTCCATGGTA+TGG | - | chr7_2:65814673-65814692 | Msa1069960:intron | 25.0% |
| ! | TAGCTAAAAAAAACCATTGA+AGG | + | chr7_2:65814720-65814739 | None:intergenic | 25.0% |
| !!! | GACTTTTAGAATTTTGTTTC+AGG | - | chr7_2:65814919-65814938 | Msa1069960:CDS | 25.0% |
| !! | TTTGTTTCAGGACTAAATTT+TGG | - | chr7_2:65814931-65814950 | Msa1069960:intron | 25.0% |
| ! | ATCAGAATTGTGATGTTAAA+TGG | - | chr7_2:65815242-65815261 | Msa1069960:intron | 25.0% |
| !! | GTGCTTTTGTTCTTATAATT+GGG | + | chr7_2:65815571-65815590 | None:intergenic | 25.0% |
| !! | TGTGCTTTTGTTCTTATAAT+TGG | + | chr7_2:65815572-65815591 | None:intergenic | 25.0% |
| !! | AATTATAAGAACAAAAGCAC+AGG | - | chr7_2:65815571-65815590 | Msa1069960:CDS | 25.0% |
| GGATGAGATATTTAGTATTG+AGG | + | chr7_2:65814194-65814213 | None:intergenic | 30.0% | |
| ATCTCATCCATTACAATGAT+AGG | - | chr7_2:65814205-65814224 | Msa1069960:three_prime_UTR | 30.0% | |
| GAATTGTAATCAACTGTTGA+AGG | + | chr7_2:65814483-65814502 | None:intergenic | 30.0% | |
| ATTAAGGTGATAGAGAATGA+AGG | + | chr7_2:65814520-65814539 | None:intergenic | 30.0% | |
| !! | AGATCGTGCTCATTATTTTT+AGG | - | chr7_2:65814627-65814646 | Msa1069960:CDS | 30.0% |
| ATCTACCTATTTGTGACAAA+TGG | - | chr7_2:65814748-65814767 | Msa1069960:intron | 30.0% | |
| GATTACCATTTGTCACAAAT+AGG | + | chr7_2:65814756-65814775 | None:intergenic | 30.0% | |
| !!! | AATGGATGATGTGTTTTTTC+AGG | - | chr7_2:65815260-65815279 | Msa1069960:intron | 30.0% |
| !!! | ATGGATGATGTGTTTTTTCA+GGG | - | chr7_2:65815261-65815280 | Msa1069960:intron | 30.0% |
| GGATGAGATATTTAGTATTG+AGG | + | chr7_2:65814194-65814213 | None:intergenic | 30.0% | |
| ATCTCATCCATTACAATGAT+AGG | - | chr7_2:65814205-65814224 | Msa1069960:three_prime_UTR | 30.0% | |
| GAATTGTAATCAACTGTTGA+AGG | + | chr7_2:65814483-65814502 | None:intergenic | 30.0% | |
| ATTAAGGTGATAGAGAATGA+AGG | + | chr7_2:65814520-65814539 | None:intergenic | 30.0% | |
| !! | AGATCGTGCTCATTATTTTT+AGG | - | chr7_2:65814627-65814646 | Msa1069960:CDS | 30.0% |
| ATCTACCTATTTGTGACAAA+TGG | - | chr7_2:65814748-65814767 | Msa1069960:intron | 30.0% | |
| GATTACCATTTGTCACAAAT+AGG | + | chr7_2:65814756-65814775 | None:intergenic | 30.0% | |
| !!! | AATGGATGATGTGTTTTTTC+AGG | - | chr7_2:65815260-65815279 | Msa1069960:intron | 30.0% |
| !!! | ATGGATGATGTGTTTTTTCA+GGG | - | chr7_2:65815261-65815280 | Msa1069960:intron | 30.0% |
| ATCTATCTCCCAAGACAAAA+AGG | - | chr7_2:65814159-65814178 | Msa1069960:three_prime_UTR | 35.0% | |
| ! | TAAGGTTGCCTTTTTGTCTT+GGG | + | chr7_2:65814170-65814189 | None:intergenic | 35.0% |
| ! | ATAAGGTTGCCTTTTTGTCT+TGG | + | chr7_2:65814171-65814190 | None:intergenic | 35.0% |
| TAGGACACCTATCATTGTAA+TGG | + | chr7_2:65814215-65814234 | None:intergenic | 35.0% | |
| !! | ACACTCTTTGGTGTTGTTAA+AGG | + | chr7_2:65814357-65814376 | None:intergenic | 35.0% |
| !! | AATTTTGGAGAGTCACAACA+TGG | - | chr7_2:65814946-65814965 | Msa1069960:intron | 35.0% |
| ATAGCGAAATCTTACGTCTT+AGG | + | chr7_2:65815167-65815186 | None:intergenic | 35.0% | |
| TGTGAGCCTGATTATCAAAA+GGG | - | chr7_2:65815325-65815344 | Msa1069960:intron | 35.0% | |
| !! | TAGACACCCTTTTGATAATC+AGG | + | chr7_2:65815334-65815353 | None:intergenic | 35.0% |
| GAAAAACCTTCTTATTGCCT+TGG | - | chr7_2:65815366-65815385 | Msa1069960:intron | 35.0% | |
| ATGAGGAATCACCCTTATAT+AGG | - | chr7_2:65815751-65815770 | Msa1069960:five_prime_UTR | 35.0% | |
| ATCTATCTCCCAAGACAAAA+AGG | - | chr7_2:65814159-65814178 | Msa1069960:three_prime_UTR | 35.0% | |
| ! | TAAGGTTGCCTTTTTGTCTT+GGG | + | chr7_2:65814170-65814189 | None:intergenic | 35.0% |
| ! | ATAAGGTTGCCTTTTTGTCT+TGG | + | chr7_2:65814171-65814190 | None:intergenic | 35.0% |
| TAGGACACCTATCATTGTAA+TGG | + | chr7_2:65814215-65814234 | None:intergenic | 35.0% | |
| !! | ACACTCTTTGGTGTTGTTAA+AGG | + | chr7_2:65814357-65814376 | None:intergenic | 35.0% |
| !! | AATTTTGGAGAGTCACAACA+TGG | - | chr7_2:65814946-65814965 | Msa1069960:intron | 35.0% |
| ATAGCGAAATCTTACGTCTT+AGG | + | chr7_2:65815167-65815186 | None:intergenic | 35.0% | |
| TGTGAGCCTGATTATCAAAA+GGG | - | chr7_2:65815325-65815344 | Msa1069960:intron | 35.0% | |
| !! | TAGACACCCTTTTGATAATC+AGG | + | chr7_2:65815334-65815353 | None:intergenic | 35.0% |
| GAAAAACCTTCTTATTGCCT+TGG | - | chr7_2:65815366-65815385 | Msa1069960:intron | 35.0% | |
| ATGAGGAATCACCCTTATAT+AGG | - | chr7_2:65815751-65815770 | Msa1069960:five_prime_UTR | 35.0% | |
| ! | GAGCTGTCTGCATTTTTGAA+GGG | + | chr7_2:65814308-65814327 | None:intergenic | 40.0% |
| ! | AGAGCTGTCTGCATTTTTGA+AGG | + | chr7_2:65814309-65814328 | None:intergenic | 40.0% |
| ! | TGTTAAAGGCACAAAGGTAG+TGG | + | chr7_2:65814343-65814362 | None:intergenic | 40.0% |
| !! | TGGTGTTGTTAAAGGCACAA+AGG | + | chr7_2:65814349-65814368 | None:intergenic | 40.0% |
| GCAAGATGTGAAACACTCTT+TGG | + | chr7_2:65814369-65814388 | None:intergenic | 40.0% | |
| GTGAGGCAATCAATTTGGTA+GGG | + | chr7_2:65814407-65814426 | None:intergenic | 40.0% | |
| AGAACGTGAGGCAATCAATT+TGG | + | chr7_2:65814412-65814431 | None:intergenic | 40.0% | |
| TGTTGAAGGATCAGAGTTGT+CGG | + | chr7_2:65814469-65814488 | None:intergenic | 40.0% | |
| CAAGTGTTTGAACCATACCA+TGG | + | chr7_2:65814688-65814707 | None:intergenic | 40.0% | |
| CTTGCATGAAACTCCTTCAA+TGG | - | chr7_2:65814704-65814723 | Msa1069960:intron | 40.0% | |
| CTGTGAGCCTGATTATCAAA+AGG | - | chr7_2:65815324-65815343 | Msa1069960:intron | 40.0% | |
| CAATAGCCAAGGCAATAAGA+AGG | + | chr7_2:65815375-65815394 | None:intergenic | 40.0% | |
| GTTGTAAGCTTCAATAGCCA+AGG | + | chr7_2:65815386-65815405 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGGCAATACAGA+TGG | - | chr7_2:65815583-65815602 | Msa1069960:CDS | 40.0% |
| CTCAAGTCAGAATGTGAATG+AGG | - | chr7_2:65815682-65815701 | Msa1069960:five_prime_UTR | 40.0% | |
| AAGTCAGAATGTGAATGAGG+TGG | - | chr7_2:65815685-65815704 | Msa1069960:five_prime_UTR | 40.0% | |
| AGGTGGTTAAGCATAATGCA+AGG | - | chr7_2:65815702-65815721 | Msa1069960:five_prime_UTR | 40.0% | |
| TGAAAGTGAATCGTACCTCA+AGG | - | chr7_2:65815725-65815744 | Msa1069960:five_prime_UTR | 40.0% | |
| GAAAGTGAATCGTACCTCAA+GGG | - | chr7_2:65815726-65815745 | Msa1069960:five_prime_UTR | 40.0% | |
| ! | GAGCTGTCTGCATTTTTGAA+GGG | + | chr7_2:65814308-65814327 | None:intergenic | 40.0% |
| ! | AGAGCTGTCTGCATTTTTGA+AGG | + | chr7_2:65814309-65814328 | None:intergenic | 40.0% |
| ! | TGTTAAAGGCACAAAGGTAG+TGG | + | chr7_2:65814343-65814362 | None:intergenic | 40.0% |
| !! | TGGTGTTGTTAAAGGCACAA+AGG | + | chr7_2:65814349-65814368 | None:intergenic | 40.0% |
| GCAAGATGTGAAACACTCTT+TGG | + | chr7_2:65814369-65814388 | None:intergenic | 40.0% | |
| GTGAGGCAATCAATTTGGTA+GGG | + | chr7_2:65814407-65814426 | None:intergenic | 40.0% | |
| AGAACGTGAGGCAATCAATT+TGG | + | chr7_2:65814412-65814431 | None:intergenic | 40.0% | |
| TGTTGAAGGATCAGAGTTGT+CGG | + | chr7_2:65814469-65814488 | None:intergenic | 40.0% | |
| CAAGTGTTTGAACCATACCA+TGG | + | chr7_2:65814688-65814707 | None:intergenic | 40.0% | |
| CTTGCATGAAACTCCTTCAA+TGG | - | chr7_2:65814704-65814723 | Msa1069960:intron | 40.0% | |
| CTGTGAGCCTGATTATCAAA+AGG | - | chr7_2:65815324-65815343 | Msa1069960:intron | 40.0% | |
| CAATAGCCAAGGCAATAAGA+AGG | + | chr7_2:65815375-65815394 | None:intergenic | 40.0% | |
| GTTGTAAGCTTCAATAGCCA+AGG | + | chr7_2:65815386-65815405 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGGCAATACAGA+TGG | - | chr7_2:65815583-65815602 | Msa1069960:CDS | 40.0% |
| CTCAAGTCAGAATGTGAATG+AGG | - | chr7_2:65815682-65815701 | Msa1069960:five_prime_UTR | 40.0% | |
| AAGTCAGAATGTGAATGAGG+TGG | - | chr7_2:65815685-65815704 | Msa1069960:five_prime_UTR | 40.0% | |
| AGGTGGTTAAGCATAATGCA+AGG | - | chr7_2:65815702-65815721 | Msa1069960:five_prime_UTR | 40.0% | |
| TGAAAGTGAATCGTACCTCA+AGG | - | chr7_2:65815725-65815744 | Msa1069960:five_prime_UTR | 40.0% | |
| GAAAGTGAATCGTACCTCAA+GGG | - | chr7_2:65815726-65815745 | Msa1069960:five_prime_UTR | 40.0% | |
| CGTGAGGCAATCAATTTGGT+AGG | + | chr7_2:65814408-65814427 | None:intergenic | 45.0% | |
| ACTTTGATTGCAGTGTAGCG+AGG | + | chr7_2:65814441-65814460 | None:intergenic | 45.0% | |
| AGCACGATCTGTACTTCCTA+AGG | + | chr7_2:65814617-65814636 | None:intergenic | 45.0% | |
| GGTGTATCATTCCTTGCTTC+AGG | + | chr7_2:65815092-65815111 | None:intergenic | 45.0% | |
| AGCTTCAGGGAACATTGAGA+GGG | - | chr7_2:65815121-65815140 | Msa1069960:intron | 45.0% | |
| ! | TTTCAGGGTTTTCCAAGCAG+AGG | - | chr7_2:65815276-65815295 | Msa1069960:intron | 45.0% |
| GCAATACAGATGGATGCTCA+TGG | - | chr7_2:65815593-65815612 | Msa1069960:CDS | 45.0% | |
| ! | TCACATTCTGACTTGAGCGT+TGG | + | chr7_2:65815679-65815698 | None:intergenic | 45.0% |
| GAATCACCCTTATATAGGCG+TGG | - | chr7_2:65815756-65815775 | Msa1069960:five_prime_UTR | 45.0% | |
| AAGCCTCCACGCCTATATAA+GGG | + | chr7_2:65815765-65815784 | None:intergenic | 45.0% | |
| CGTGAGGCAATCAATTTGGT+AGG | + | chr7_2:65814408-65814427 | None:intergenic | 45.0% | |
| ACTTTGATTGCAGTGTAGCG+AGG | + | chr7_2:65814441-65814460 | None:intergenic | 45.0% | |
| AGCACGATCTGTACTTCCTA+AGG | + | chr7_2:65814617-65814636 | None:intergenic | 45.0% | |
| GGTGTATCATTCCTTGCTTC+AGG | + | chr7_2:65815092-65815111 | None:intergenic | 45.0% | |
| AGCTTCAGGGAACATTGAGA+GGG | - | chr7_2:65815121-65815140 | Msa1069960:intron | 45.0% | |
| ! | TTTCAGGGTTTTCCAAGCAG+AGG | - | chr7_2:65815276-65815295 | Msa1069960:intron | 45.0% |
| GCAATACAGATGGATGCTCA+TGG | - | chr7_2:65815593-65815612 | Msa1069960:CDS | 45.0% | |
| ! | TCACATTCTGACTTGAGCGT+TGG | + | chr7_2:65815679-65815698 | None:intergenic | 45.0% |
| GAATCACCCTTATATAGGCG+TGG | - | chr7_2:65815756-65815775 | Msa1069960:five_prime_UTR | 45.0% | |
| AAGCCTCCACGCCTATATAA+GGG | + | chr7_2:65815765-65815784 | None:intergenic | 45.0% | |
| ! | CACAAAGGTAGTGGCTGCAA+AGG | + | chr7_2:65814334-65814353 | None:intergenic | 50.0% |
| ! | TGTCAGAGTGTTTCCAGCTG+AGG | - | chr7_2:65815004-65815023 | Msa1069960:intron | 50.0% |
| TCCAGCTGAGGCATGTGAAA+CGG | - | chr7_2:65815016-65815035 | Msa1069960:intron | 50.0% | |
| AGGCATGTGAAACGGTTGGA+GGG | - | chr7_2:65815024-65815043 | Msa1069960:intron | 50.0% | |
| ACACCAAAGACTGCAGCTTC+AGG | - | chr7_2:65815107-65815126 | Msa1069960:intron | 50.0% | |
| CACCAAAGACTGCAGCTTCA+GGG | - | chr7_2:65815108-65815127 | Msa1069960:intron | 50.0% | |
| TTCCCTGAAGCTGCAGTCTT+TGG | + | chr7_2:65815113-65815132 | None:intergenic | 50.0% | |
| CAGCTTCAGGGAACATTGAG+AGG | - | chr7_2:65815120-65815139 | Msa1069960:intron | 50.0% | |
| GATCATCACAAGCCTCTGCT+TGG | + | chr7_2:65815291-65815310 | None:intergenic | 50.0% | |
| GCAGAGGCTTGTGATGATCT+TGG | - | chr7_2:65815292-65815311 | Msa1069960:intron | 50.0% | |
| GAGGCTTGTGATGATCTTGG+AGG | - | chr7_2:65815295-65815314 | Msa1069960:intron | 50.0% | |
| ACAGATGGATGCTCATGGTG+CGG | - | chr7_2:65815598-65815617 | Msa1069960:CDS | 50.0% | |
| ! | TGGAGTGCTAACGCACTTGT+AGG | + | chr7_2:65815659-65815678 | None:intergenic | 50.0% |
| ATCGTACCTCAAGGGTGATG+AGG | - | chr7_2:65815734-65815753 | Msa1069960:five_prime_UTR | 50.0% | |
| GTGATTCCTCATCACCCTTG+AGG | + | chr7_2:65815743-65815762 | None:intergenic | 50.0% | |
| TCACCCTTATATAGGCGTGG+AGG | - | chr7_2:65815759-65815778 | Msa1069960:five_prime_UTR | 50.0% | |
| CAAGCCTCCACGCCTATATA+AGG | + | chr7_2:65815766-65815785 | None:intergenic | 50.0% | |
| GAGGCTTGTAACTACCTCCA+TGG | - | chr7_2:65815778-65815797 | Msa1069960:five_prime_UTR | 50.0% | |
| ! | CACAAAGGTAGTGGCTGCAA+AGG | + | chr7_2:65814334-65814353 | None:intergenic | 50.0% |
| ! | TGTCAGAGTGTTTCCAGCTG+AGG | - | chr7_2:65815004-65815023 | Msa1069960:intron | 50.0% |
| TCCAGCTGAGGCATGTGAAA+CGG | - | chr7_2:65815016-65815035 | Msa1069960:intron | 50.0% | |
| AGGCATGTGAAACGGTTGGA+GGG | - | chr7_2:65815024-65815043 | Msa1069960:intron | 50.0% | |
| ACACCAAAGACTGCAGCTTC+AGG | - | chr7_2:65815107-65815126 | Msa1069960:intron | 50.0% | |
| CACCAAAGACTGCAGCTTCA+GGG | - | chr7_2:65815108-65815127 | Msa1069960:intron | 50.0% | |
| TTCCCTGAAGCTGCAGTCTT+TGG | + | chr7_2:65815113-65815132 | None:intergenic | 50.0% | |
| CAGCTTCAGGGAACATTGAG+AGG | - | chr7_2:65815120-65815139 | Msa1069960:intron | 50.0% | |
| GATCATCACAAGCCTCTGCT+TGG | + | chr7_2:65815291-65815310 | None:intergenic | 50.0% | |
| GCAGAGGCTTGTGATGATCT+TGG | - | chr7_2:65815292-65815311 | Msa1069960:intron | 50.0% | |
| GAGGCTTGTGATGATCTTGG+AGG | - | chr7_2:65815295-65815314 | Msa1069960:intron | 50.0% | |
| ACAGATGGATGCTCATGGTG+CGG | - | chr7_2:65815598-65815617 | Msa1069960:CDS | 50.0% | |
| ! | TGGAGTGCTAACGCACTTGT+AGG | + | chr7_2:65815659-65815678 | None:intergenic | 50.0% |
| ATCGTACCTCAAGGGTGATG+AGG | - | chr7_2:65815734-65815753 | Msa1069960:five_prime_UTR | 50.0% | |
| GTGATTCCTCATCACCCTTG+AGG | + | chr7_2:65815743-65815762 | None:intergenic | 50.0% | |
| TCACCCTTATATAGGCGTGG+AGG | - | chr7_2:65815759-65815778 | Msa1069960:five_prime_UTR | 50.0% | |
| CAAGCCTCCACGCCTATATA+AGG | + | chr7_2:65815766-65815785 | None:intergenic | 50.0% | |
| GCGAGGTGAAGAAGAACGTG+AGG | + | chr7_2:65814424-65814443 | None:intergenic | 55.0% | |
| ACCGTTTCACATGCCTCAGC+TGG | + | chr7_2:65815020-65815039 | None:intergenic | 55.0% | |
| GCTGAGGCATGTGAAACGGT+TGG | - | chr7_2:65815020-65815039 | Msa1069960:intron | 55.0% | |
| GAGGCATGTGAAACGGTTGG+AGG | - | chr7_2:65815023-65815042 | Msa1069960:intron | 55.0% | |
| GGCATGTGAAACGGTTGGAG+GGG | - | chr7_2:65815025-65815044 | Msa1069960:intron | 55.0% | |
| GGTTGGAGGGGATGCTTGTT+TGG | - | chr7_2:65815037-65815056 | Msa1069960:intron | 55.0% | |
| TCAGGCTGCAGCTTGACTTC+AGG | + | chr7_2:65815074-65815093 | None:intergenic | 55.0% | |
| TCAAGCTGCAGCCTGAAGCA+AGG | - | chr7_2:65815078-65815097 | Msa1069960:intron | 55.0% | |
| ! | GGTACTTTTCACTCCCACCG+TGG | + | chr7_2:65815638-65815657 | None:intergenic | 55.0% |
| GCGAGGTGAAGAAGAACGTG+AGG | + | chr7_2:65814424-65814443 | None:intergenic | 55.0% | |
| ACCGTTTCACATGCCTCAGC+TGG | + | chr7_2:65815020-65815039 | None:intergenic | 55.0% | |
| GCTGAGGCATGTGAAACGGT+TGG | - | chr7_2:65815020-65815039 | Msa1069960:intron | 55.0% | |
| GAGGCATGTGAAACGGTTGG+AGG | - | chr7_2:65815023-65815042 | Msa1069960:intron | 55.0% | |
| GGCATGTGAAACGGTTGGAG+GGG | - | chr7_2:65815025-65815044 | Msa1069960:intron | 55.0% | |
| GGTTGGAGGGGATGCTTGTT+TGG | - | chr7_2:65815037-65815056 | Msa1069960:intron | 55.0% | |
| TCAGGCTGCAGCTTGACTTC+AGG | + | chr7_2:65815074-65815093 | None:intergenic | 55.0% | |
| TCAAGCTGCAGCCTGAAGCA+AGG | - | chr7_2:65815078-65815097 | Msa1069960:intron | 55.0% | |
| ! | GGTACTTTTCACTCCCACCG+TGG | + | chr7_2:65815638-65815657 | None:intergenic | 55.0% |
| CCACCGTGGAATCACCAGCT+CGG | + | chr7_2:65815624-65815643 | None:intergenic | 60.0% | |
| CGAGCTGGTGATTCCACGGT+GGG | - | chr7_2:65815622-65815641 | Msa1069960:exon | 60.0% | |
| CCACCGTGGAATCACCAGCT+CGG | + | chr7_2:65815624-65815643 | None:intergenic | 60.0% | |
| CGAGCTGGTGATTCCACGGT+GGG | - | chr7_2:65815622-65815641 | Msa1069960:exon | 60.0% | |
| CGGCCGAGCTGGTGATTCCA+CGG | - | chr7_2:65815618-65815637 | Msa1069960:CDS | 65.0% | |
| CCGAGCTGGTGATTCCACGG+TGG | - | chr7_2:65815621-65815640 | Msa1069960:exon | 65.0% | |
| CGGCCGAGCTGGTGATTCCA+CGG | - | chr7_2:65815618-65815637 | Msa1069960:CDS | 65.0% | |
| CCGAGCTGGTGATTCCACGG+TGG | - | chr7_2:65815621-65815640 | Msa1069960:exon | 65.0% | |
| TGCTCATGGTGCGGCCGAGC+TGG | - | chr7_2:65815607-65815626 | Msa1069960:CDS | 70.0% | |
| TGCTCATGGTGCGGCCGAGC+TGG | - | chr7_2:65815607-65815626 | Msa1069960:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 65814154 | 65815798 | 65814154 | ID=Msa1069960;Name=Msa1069960 |
| chr7_2 | mRNA | 65814154 | 65815798 | 65814154 | ID=Msa1069960-mRNA-1;Parent=Msa1069960;Name=Msa1069960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=161|1|1|1|1|1|3|441|144 |
| chr7_2 | exon | 65814154 | 65814670 | 65814154 | ID=Msa1069960-mRNA-1:exon:13909;Parent=Msa1069960-mRNA-1 |
| chr7_2 | exon | 65814781 | 65814942 | 65814781 | ID=Msa1069960-mRNA-1:exon:13908;Parent=Msa1069960-mRNA-1 |
| chr7_2 | exon | 65815441 | 65815798 | 65815441 | ID=Msa1069960-mRNA-1:exon:13907;Parent=Msa1069960-mRNA-1 |
| chr7_2 | five_prime_UTR | 65815638 | 65815798 | 65815638 | ID=Msa1069960-mRNA-1:five_prime_utr;Parent=Msa1069960-mRNA-1 |
| chr7_2 | CDS | 65815441 | 65815637 | 65815441 | ID=Msa1069960-mRNA-1:cds;Parent=Msa1069960-mRNA-1 |
| chr7_2 | CDS | 65814781 | 65814942 | 65814781 | ID=Msa1069960-mRNA-1:cds;Parent=Msa1069960-mRNA-1 |
| chr7_2 | CDS | 65814595 | 65814670 | 65814595 | ID=Msa1069960-mRNA-1:cds;Parent=Msa1069960-mRNA-1 |
| chr7_2 | three_prime_UTR | 65814154 | 65814594 | 65814154 | ID=Msa1069960-mRNA-1:three_prime_utr;Parent=Msa1069960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
