Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802920 | XP_003612831.1 | 98.674 | 377 | 5 | 0 | 13 | 389 | 1 | 377 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802920 | sp|O82290|SKL2_ARATH | 64.740 | 346 | 116 | 2 | 38 | 383 | 42 | 381 | 9.64e-156 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802920 | G7KCE4 | 98.674 | 377 | 5 | 0 | 13 | 389 | 1 | 377 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0802920 | 0.801963 | 7.026089e-49 | -8.615850e-47 |
| Msa0008250 | Msa0802920 | 0.805624 | 1.220049e-49 | -8.615850e-47 |
| Msa0029280 | Msa0802920 | 0.812750 | 3.622685e-51 | -8.615850e-47 |
| Msa0030400 | Msa0802920 | 0.845044 | 5.190543e-59 | -8.615850e-47 |
| Msa0032700 | Msa0802920 | 0.810444 | 1.149120e-50 | -8.615850e-47 |
| Msa0076100 | Msa0802920 | 0.811934 | 5.460665e-51 | -8.615850e-47 |
| Msa0115410 | Msa0802920 | 0.824512 | 7.753008e-54 | -8.615850e-47 |
| Msa0115950 | Msa0802920 | 0.808682 | 2.746707e-50 | -8.615850e-47 |
| Msa0116200 | Msa0802920 | 0.825694 | 4.077123e-54 | -8.615850e-47 |
| Msa0608780 | Msa0802920 | 0.827976 | 1.161868e-54 | -8.615850e-47 |
| Msa0610300 | Msa0802920 | 0.834111 | 3.620994e-56 | -8.615850e-47 |
| Msa0615430 | Msa0802920 | 0.816161 | 6.378376e-52 | -8.615850e-47 |
| Msa0616000 | Msa0802920 | 0.802459 | 5.553889e-49 | -8.615850e-47 |
| Msa0618490 | Msa0802920 | 0.800498 | 1.401022e-48 | -8.615850e-47 |
| Msa0632040 | Msa0802920 | 0.807691 | 4.466659e-50 | -8.615850e-47 |
| Msa0638500 | Msa0802920 | 0.829606 | 4.686779e-55 | -8.615850e-47 |
| Msa0649250 | Msa0802920 | 0.831049 | 2.080551e-55 | -8.615850e-47 |
| Msa0650360 | Msa0802920 | 0.800085 | 1.700342e-48 | -8.615850e-47 |
| Msa0653090 | Msa0802920 | 0.804054 | 2.597187e-49 | -8.615850e-47 |
| Msa0654880 | Msa0802920 | 0.814303 | 1.650076e-51 | -8.615850e-47 |
| Msa0655360 | Msa0802920 | 0.809767 | 1.607761e-50 | -8.615850e-47 |
| Msa0658280 | Msa0802920 | 0.801319 | 9.521821e-49 | -8.615850e-47 |
| Msa0660070 | Msa0802920 | 0.842196 | 2.996592e-58 | -8.615850e-47 |
| Msa0662670 | Msa0802920 | 0.828174 | 1.041215e-54 | -8.615850e-47 |
| Msa0670690 | Msa0802920 | 0.812500 | 4.110105e-51 | -8.615850e-47 |
| Msa0677840 | Msa0802920 | 0.851728 | 7.346511e-61 | -8.615850e-47 |
| Msa0697180 | Msa0802920 | 0.830255 | 3.254472e-55 | -8.615850e-47 |
| Msa0698480 | Msa0802920 | 0.820079 | 8.289562e-53 | -8.615850e-47 |
| Msa0698650 | Msa0802920 | 0.819956 | 8.846579e-53 | -8.615850e-47 |
| Msa0705710 | Msa0802920 | 0.838420 | 2.905759e-57 | -8.615850e-47 |
| Msa0706130 | Msa0802920 | 0.832710 | 8.092494e-56 | -8.615850e-47 |
| Msa0707270 | Msa0802920 | 0.833569 | 4.945398e-56 | -8.615850e-47 |
| Msa0708870 | Msa0802920 | 0.828885 | 7.009339e-55 | -8.615850e-47 |
| Msa0710950 | Msa0802920 | 0.806429 | 8.261759e-50 | -8.615850e-47 |
| Msa0802910 | Msa0802920 | 0.979153 | 2.389288e-147 | -8.615850e-47 |
| Msa0802920 | Msa0807850 | 0.829079 | 6.292494e-55 | -8.615850e-47 |
| Msa0802920 | Msa0829430 | 0.812551 | 4.004650e-51 | -8.615850e-47 |
| Msa0802920 | Msa0846070 | 0.839524 | 1.505282e-57 | -8.615850e-47 |
| Msa0802920 | Msa0876270 | 0.871329 | 7.426312e-67 | -8.615850e-47 |
| Msa0802920 | Msa0967900 | 0.801296 | 9.625873e-49 | -8.615850e-47 |
| Msa0802920 | Msa1035790 | 0.812403 | 4.315623e-51 | -8.615850e-47 |
| Msa0802920 | Msa1038230 | 0.809443 | 1.887530e-50 | -8.615850e-47 |
| Msa0802920 | Msa1039860 | 0.812773 | 3.581522e-51 | -8.615850e-47 |
| Msa0802920 | Msa1040070 | 0.821909 | 3.142083e-53 | -8.615850e-47 |
| Msa0802920 | Msa1056590 | 0.800175 | 1.629943e-48 | -8.615850e-47 |
| Msa0802920 | Msa1056790 | 0.815685 | 8.145948e-52 | -8.615850e-47 |
| Msa0802920 | Msa1083460 | 0.801532 | 8.612261e-49 | -8.615850e-47 |
| Msa0802920 | Msa1084210 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0802920 | Msa1092430 | 0.840952 | 6.377820e-58 | -8.615850e-47 |
| Msa0802920 | Msa1128230 | 0.828966 | 6.701304e-55 | -8.615850e-47 |
| Msa0802920 | Msa1143060 | 0.836528 | 8.879259e-57 | -8.615850e-47 |
| Msa0802920 | Msa1156480 | 0.819017 | 1.448039e-52 | -8.615850e-47 |
| Msa0802920 | Msa1184010 | 0.802008 | 6.877753e-49 | -8.615850e-47 |
| Msa0802920 | Msa1215790 | 0.809287 | 2.038649e-50 | -8.615850e-47 |
| Msa0802920 | Msa1244380 | 0.803411 | 3.530566e-49 | -8.615850e-47 |
| Msa0802920 | Msa1254990 | 0.836797 | 7.580264e-57 | -8.615850e-47 |
| Msa0802920 | Msa1297720 | 0.802072 | 6.673994e-49 | -8.615850e-47 |
| Msa0802920 | Msa1301610 | 0.800671 | 1.291759e-48 | -8.615850e-47 |
| Msa0802920 | Msa1326800 | 0.804060 | 2.589519e-49 | -8.615850e-47 |
| Msa0802920 | Msa1327690 | 0.823900 | 1.079606e-53 | -8.615850e-47 |
| Msa0802920 | Msa1341390 | 0.821932 | 3.104332e-53 | -8.615850e-47 |
| Msa0802920 | Msa1348230 | 0.817219 | 3.694300e-52 | -8.615850e-47 |
| Msa0802920 | Msa1349490 | 0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0802920 | Msa1356680 | 0.841743 | 3.949073e-58 | -8.615850e-47 |
| Msa0802920 | Msa1369220 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0802920 | Msa1372570 | 0.806572 | 7.706120e-50 | -8.615850e-47 |
| Msa0802920 | Msa1372680 | 0.804884 | 1.743698e-49 | -8.615850e-47 |
| Msa0802920 | Msa1375980 | 0.816320 | 5.878020e-52 | -8.615850e-47 |
| Msa0802920 | Msa1376230 | 0.804606 | 1.992596e-49 | -8.615850e-47 |
| Msa0802920 | Msa1393550 | 0.836327 | 9.985874e-57 | -8.615850e-47 |
| Msa0802920 | Msa1403820 | 0.802706 | 4.939593e-49 | -8.615850e-47 |
| Msa0802920 | Msa1406020 | 0.822397 | 2.420922e-53 | -8.615850e-47 |
| Msa0802920 | Msa1413360 | 0.812644 | 3.821760e-51 | -8.615850e-47 |
| Msa0802920 | Msa1418780 | 0.833670 | 4.667730e-56 | -8.615850e-47 |
| Msa0802920 | Msa1426310 | 0.835997 | 1.211164e-56 | -8.615850e-47 |
| Msa0802920 | Msa1438780 | 0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0802920 | Msa1456170 | 0.804969 | 1.673282e-49 | -8.615850e-47 |
| Msa0802920 | Msa1456620 | 0.840676 | 7.532518e-58 | -8.615850e-47 |
| Msa0127060 | Msa0802920 | 0.810056 | 1.393229e-50 | -8.615850e-47 |
| Msa0133390 | Msa0802920 | 0.810875 | 9.273581e-51 | -8.615850e-47 |
| Msa0157030 | Msa0802920 | 0.816386 | 5.679330e-52 | -8.615850e-47 |
| Msa0169320 | Msa0802920 | 0.806966 | 6.364442e-50 | -8.615850e-47 |
| Msa0173760 | Msa0802920 | 0.833744 | 4.472380e-56 | -8.615850e-47 |
| Msa0173850 | Msa0802920 | 0.815486 | 9.020989e-52 | -8.615850e-47 |
| Msa0179200 | Msa0802920 | 0.828378 | 9.297017e-55 | -8.615850e-47 |
| Msa0181560 | Msa0802920 | 0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa0184800 | Msa0802920 | 0.808943 | 2.415819e-50 | -8.615850e-47 |
| Msa0184900 | Msa0802920 | 0.804831 | 1.788644e-49 | -8.615850e-47 |
| Msa0217300 | Msa0802920 | 0.842285 | 2.839759e-58 | -8.615850e-47 |
| Msa0380390 | Msa0802920 | 0.841708 | 4.034337e-58 | -8.615850e-47 |
| Msa0387970 | Msa0802920 | 0.827479 | 1.529234e-54 | -8.615850e-47 |
| Msa0400900 | Msa0802920 | 0.843895 | 1.057237e-58 | -8.615850e-47 |
| Msa0422230 | Msa0802920 | 0.834956 | 2.220754e-56 | -8.615850e-47 |
| Msa0427750 | Msa0802920 | 0.831414 | 1.691988e-55 | -8.615850e-47 |
| Msa0427960 | Msa0802920 | 0.835062 | 2.088504e-56 | -8.615850e-47 |
| Msa0459920 | Msa0802920 | 0.822263 | 2.601761e-53 | -8.615850e-47 |
| Msa0240640 | Msa0802920 | 0.819234 | 1.292655e-52 | -8.615850e-47 |
| Msa0253510 | Msa0802920 | 0.813687 | 2.255972e-51 | -8.615850e-47 |
| Msa0258410 | Msa0802920 | 0.816782 | 4.631218e-52 | -8.615850e-47 |
| Msa0265440 | Msa0802920 | 0.808031 | 3.782283e-50 | -8.615850e-47 |
| Msa0269430 | Msa0802920 | 0.826114 | 3.239353e-54 | -8.615850e-47 |
| Msa0274890 | Msa0802920 | 0.837714 | 4.415692e-57 | -8.615850e-47 |
| Msa0304020 | Msa0802920 | 0.810640 | 1.042253e-50 | -8.615850e-47 |
| Msa0306160 | Msa0802920 | 0.847832 | 9.007478e-60 | -8.615850e-47 |
| Msa0313800 | Msa0802920 | 0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa0323790 | Msa0802920 | 0.806054 | 9.911717e-50 | -8.615850e-47 |
| Msa0343230 | Msa0802920 | 0.833740 | 4.482115e-56 | -8.615850e-47 |
| Msa0349220 | Msa0802920 | 0.808639 | 2.805698e-50 | -8.615850e-47 |
| Msa0510410 | Msa0802920 | 0.806551 | 7.788302e-50 | -8.615850e-47 |
| Msa0518580 | Msa0802920 | 0.827540 | 1.478701e-54 | -8.615850e-47 |
| Msa0528830 | Msa0802920 | 0.801502 | 8.736003e-49 | -8.615850e-47 |
| Msa0548210 | Msa0802920 | 0.804474 | 2.123186e-49 | -8.615850e-47 |
| Msa0549940 | Msa0802920 | 0.813060 | 3.098461e-51 | -8.615850e-47 |
| Msa0557770 | Msa0802920 | 0.803420 | 3.515746e-49 | -8.615850e-47 |
| Msa0561420 | Msa0802920 | 0.815383 | 9.511098e-52 | -8.615850e-47 |
| Msa0565530 | Msa0802920 | 0.810336 | 1.212653e-50 | -8.615850e-47 |
| Msa0573970 | Msa0802920 | 0.815287 | 9.988795e-52 | -8.615850e-47 |
| Msa0589680 | Msa0802920 | 0.861256 | 1.165990e-63 | -8.615850e-47 |
| Msa0590260 | Msa0802920 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802920 | MtrunA17_Chr5g0410771 | 98.674 | 377 | 5 | 0 | 13 | 389 | 1 | 377 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802920 | AT2G35500.1 | 64.740 | 346 | 116 | 2 | 38 | 383 | 42 | 381 | 9.80e-157 | 447 |
Find 100 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCTCTTCAGCCACTTTA+TGG | 0.119123 | 5_3:-17766623 | None:intergenic |
| GAACGAAGTGAGTTGAAATT+TGG | 0.220360 | 5_3:-17765777 | None:intergenic |
| TCAGCAACAGCTGGAGTTCT+TGG | 0.290771 | 5_3:+17769408 | Msa0802920:three_prime_UTR |
| CTGGAAGTTTCTTGTCTGAT+AGG | 0.299443 | 5_3:-17768703 | None:intergenic |
| GTTTCACCACCTTCACTTGA+TGG | 0.305523 | 5_3:-17769326 | None:intergenic |
| TTTATGCAGGATTTACTGTT+TGG | 0.310413 | 5_3:+17768000 | Msa0802920:CDS |
| TCGTAAGTTGTGGTGGAAAC+AGG | 0.339571 | 5_3:-17765873 | None:intergenic |
| TGAAGAGCTTGCTACTGGTC+TGG | 0.344091 | 5_3:+17766635 | Msa0802920:CDS |
| TCTCCATCTTCTATCTCTAT+TGG | 0.346357 | 5_3:+17765657 | Msa0802920:CDS |
| GAAGAGCTTGCTACTGGTCT+GGG | 0.347927 | 5_3:+17766636 | Msa0802920:CDS |
| TTCTATCTCTATTGGTGAAA+TGG | 0.350542 | 5_3:+17765665 | Msa0802920:CDS |
| TTAAACCCTCGGAAACAATA+TGG | 0.358216 | 5_3:+17766350 | Msa0802920:CDS |
| GGCAGTGAAGGAGCATTTGC+AGG | 0.372222 | 5_3:-17765850 | None:intergenic |
| CTATCAGACAAGAAACTTCC+AGG | 0.381417 | 5_3:+17768704 | Msa0802920:CDS |
| CTGCTGGAAGATCTGATAAA+TGG | 0.382309 | 5_3:+17767970 | Msa0802920:CDS |
| AAGTACAGTGCCTTCGCCTT+CGG | 0.393292 | 5_3:-17767796 | None:intergenic |
| AAAATGATCCTGAGTTGAAA+TGG | 0.404730 | 5_3:+17766502 | Msa0802920:CDS |
| ATGGAGTTAAGATTAAATAT+AGG | 0.407883 | 5_3:+17766202 | Msa0802920:CDS |
| ATTGAGAAAATAACGATGAA+TGG | 0.409404 | 5_3:-17765806 | None:intergenic |
| AAGAAGCACAAAAGACATAT+TGG | 0.410030 | 5_3:+17766237 | Msa0802920:CDS |
| AGGGCAGCAGTTGCAACATT+AGG | 0.414670 | 5_3:+17767933 | Msa0802920:CDS |
| CCACCAGTCCCGCTGCTCTC+AGG | 0.427076 | 5_3:+17765697 | Msa0802920:CDS |
| GGAGGTAAACATGGTGCTGC+TGG | 0.447752 | 5_3:+17767954 | Msa0802920:CDS |
| TTGAGAAAATAACGATGAAT+GGG | 0.450204 | 5_3:-17765805 | None:intergenic |
| AGTGCTCTGCTAGTCATGTA+AGG | 0.451996 | 5_3:+17767913 | Msa0802920:intron |
| ACTTACATGAATCCACAGTT+TGG | 0.453144 | 5_3:-17766875 | None:intergenic |
| GACATCCCAATCTTATGTAT+AGG | 0.456670 | 5_3:-17769265 | None:intergenic |
| GGCCTGACATCATGGAATCA+TGG | 0.458410 | 5_3:+17766523 | Msa0802920:CDS |
| AAACCTGAGAGCAGCGGGAC+TGG | 0.458545 | 5_3:-17765700 | None:intergenic |
| AGATGTGGTTGTGAAATTAC+AGG | 0.459192 | 5_3:+17768616 | Msa0802920:CDS |
| CATAAAACTTACCAGACAAA+GGG | 0.460186 | 5_3:-17769603 | None:intergenic |
| ATTAGTGTCTATCAACGTAA+TGG | 0.470764 | 5_3:-17766311 | None:intergenic |
| TTAGTGTCTATCAACGTAAT+GGG | 0.472184 | 5_3:-17766310 | None:intergenic |
| TCATGGGAATCACTTGCTGC+TGG | 0.474008 | 5_3:+17766540 | Msa0802920:CDS |
| TCCCATGATTCCATGATGTC+AGG | 0.474648 | 5_3:-17766525 | None:intergenic |
| GAGCATTTGCAGGGAGAAAG+AGG | 0.479003 | 5_3:-17765840 | None:intergenic |
| AAAAGCCTATACATAAGATT+GGG | 0.479493 | 5_3:+17769260 | Msa0802920:CDS |
| AAACTATCCACCCCTTTGTC+TGG | 0.482686 | 5_3:+17769592 | Msa0802920:three_prime_UTR |
| GATTGGGATGTCGTGGTGAT+TGG | 0.488854 | 5_3:+17769276 | Msa0802920:CDS |
| TTTCTGGTTGTGGGATTTGG+AGG | 0.494317 | 5_3:-17765726 | None:intergenic |
| AAATGGCGACATCTTTATGC+AGG | 0.496184 | 5_3:+17767987 | Msa0802920:CDS |
| TTATGCTAAAAGTGTGGCAC+AGG | 0.496935 | 5_3:+17768652 | Msa0802920:CDS |
| GGAAGAAACCTGAGAGCAGC+GGG | 0.503731 | 5_3:-17765705 | None:intergenic |
| TCACTTGATGGATCCCAACC+AGG | 0.504453 | 5_3:-17769314 | None:intergenic |
| TTCTGATAATGCTTCAGAGA+TGG | 0.507023 | 5_3:+17766183 | Msa0802920:CDS |
| ATTCTAGGGCTGCTTGCTGA+AGG | 0.508946 | 5_3:+17767759 | Msa0802920:intron |
| GCCTGACATCATGGAATCAT+GGG | 0.510245 | 5_3:+17766524 | Msa0802920:CDS |
| TGTTTAATATGTGTGACCAT+TGG | 0.510824 | 5_3:+17769659 | Msa0802920:three_prime_UTR |
| CACTGAAATCAACCATAAAG+TGG | 0.512784 | 5_3:+17766611 | Msa0802920:CDS |
| AAGATTAAATATAGGAAGCA+TGG | 0.513771 | 5_3:+17766210 | Msa0802920:CDS |
| GTGGCTGAAGAGCTTGCTAC+TGG | 0.517891 | 5_3:+17766630 | Msa0802920:CDS |
| GGAACATCAATCTATCTTGT+CGG | 0.520634 | 5_3:+17766582 | Msa0802920:CDS |
| CGTAAGTTGTGGTGGAAACA+GGG | 0.526645 | 5_3:-17765872 | None:intergenic |
| CACTTTATGGTTGATTTCAG+TGG | 0.529748 | 5_3:-17766610 | None:intergenic |
| ACATGAATCCACAGTTTGGT+TGG | 0.537166 | 5_3:-17766871 | None:intergenic |
| AGGAAGAAACCTGAGAGCAG+CGG | 0.541060 | 5_3:-17765706 | None:intergenic |
| CACAAACCATATTGTTTCCG+AGG | 0.544173 | 5_3:-17766356 | None:intergenic |
| CTCAGGATCGTCACATCCAA+TGG | 0.554563 | 5_3:-17769675 | None:intergenic |
| TTGTCACAGACTGAAGCATC+AGG | 0.554748 | 5_3:+17768023 | Msa0802920:CDS |
| GGTGGAAACAGGGGCAGTGA+AGG | 0.554825 | 5_3:-17765862 | None:intergenic |
| GTTGAAATGGCCTGACATCA+TGG | 0.556044 | 5_3:+17766515 | Msa0802920:CDS |
| AGTGAAGGTGGTGAAACTCT+TGG | 0.556988 | 5_3:+17769332 | Msa0802920:CDS |
| TCACCAATAGAGATAGAAGA+TGG | 0.560344 | 5_3:-17765660 | None:intergenic |
| GCAGCAGTTGCAACATTAGG+AGG | 0.571731 | 5_3:+17767936 | Msa0802920:CDS |
| ATGTCAGGCCATTTCAACTC+AGG | 0.577136 | 5_3:-17766510 | None:intergenic |
| TCATAAAACTTACCAGACAA+AGG | 0.583171 | 5_3:-17769604 | None:intergenic |
| CACTTGATGGATCCCAACCA+GGG | 0.588545 | 5_3:-17769313 | None:intergenic |
| AAGTACCTCGTAAGTTGTGG+TGG | 0.588574 | 5_3:-17765880 | None:intergenic |
| TACATAAGATTGGGATGTCG+TGG | 0.592456 | 5_3:+17769269 | Msa0802920:CDS |
| CTGTACTTGAAAGCATAAGT+AGG | 0.593080 | 5_3:+17767811 | Msa0802920:CDS |
| CCTGAGAGCAGCGGGACTGG+TGG | 0.595579 | 5_3:-17765697 | None:intergenic |
| AGATGAAGATTCAGCAAGGG+AGG | 0.603993 | 5_3:+17768547 | Msa0802920:intron |
| AAGAGCTTGCTACTGGTCTG+GGG | 0.608924 | 5_3:+17766637 | Msa0802920:CDS |
| AGTAAGTACCTCGTAAGTTG+TGG | 0.609430 | 5_3:-17765883 | None:intergenic |
| GACTCAGTAGCCGAAGGCGA+AGG | 0.609903 | 5_3:+17767786 | Msa0802920:CDS |
| GCAGTGAAGGAGCATTTGCA+GGG | 0.610757 | 5_3:-17765849 | None:intergenic |
| GGTTGTGAAATTACAGGGAT+GGG | 0.612080 | 5_3:+17768622 | Msa0802920:CDS |
| TGTTTCCACCACAACTTACG+AGG | 0.616074 | 5_3:+17765875 | Msa0802920:CDS |
| AGCATTTGCAGGGAGAAAGA+GGG | 0.616324 | 5_3:-17765839 | None:intergenic |
| GTGCTCTGCTAGTCATGTAA+GGG | 0.626183 | 5_3:+17767914 | Msa0802920:intron |
| ACAAACCATATTGTTTCCGA+GGG | 0.626224 | 5_3:-17766355 | None:intergenic |
| AACTTATTCCAACCAAACTG+TGG | 0.626590 | 5_3:+17766863 | Msa0802920:CDS |
| TACAGATGAAGATTCAGCAA+GGG | 0.627827 | 5_3:+17768544 | Msa0802920:intron |
| TATAGATGACGATCATCTTG+TGG | 0.640045 | 5_3:+17766467 | Msa0802920:CDS |
| GGTTGGGATCCATCAAGTGA+AGG | 0.641352 | 5_3:+17769317 | Msa0802920:CDS |
| TGGTTGTGAAATTACAGGGA+TGG | 0.647286 | 5_3:+17768621 | Msa0802920:CDS |
| GGTTCTGACTCAGTAGCCGA+AGG | 0.651113 | 5_3:+17767780 | Msa0802920:CDS |
| TCCTGCTTATGCTAAAAGTG+TGG | 0.654346 | 5_3:+17768646 | Msa0802920:CDS |
| TGCATATACGAATGCAGATG+TGG | 0.657277 | 5_3:+17768601 | Msa0802920:CDS |
| ATACAGATGAAGATTCAGCA+AGG | 0.667293 | 5_3:+17768543 | Msa0802920:intron |
| CTTGATGGATCCCAACCAGG+GGG | 0.667634 | 5_3:-17769311 | None:intergenic |
| AAACTTACCAGACAAAGGGG+TGG | 0.670092 | 5_3:-17769599 | None:intergenic |
| ACTTGATGGATCCCAACCAG+GGG | 0.672298 | 5_3:-17769312 | None:intergenic |
| GTAAGTTGTGGTGGAAACAG+GGG | 0.682098 | 5_3:-17765871 | None:intergenic |
| GCAACATTAGGAGGTAAACA+TGG | 0.688881 | 5_3:+17767945 | Msa0802920:CDS |
| CTAATCACAAATGATCAACA+TGG | 0.691459 | 5_3:+17769527 | Msa0802920:three_prime_UTR |
| TGGGATCCATCAAGTGAAGG+TGG | 0.694285 | 5_3:+17769320 | Msa0802920:CDS |
| ATAAAACTTACCAGACAAAG+GGG | 0.695668 | 5_3:-17769602 | None:intergenic |
| GATGTGGTTGTGAAATTACA+GGG | 0.701042 | 5_3:+17768617 | Msa0802920:CDS |
| TATGCTAAAAGTGTGGCACA+GGG | 0.729528 | 5_3:+17768653 | Msa0802920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATAGAAAAAGAAAT+TGG | - | chr5_3:17766083-17766102 | None:intergenic | 10.0% |
| !! | ACAAATATATATCAAAATAT+TGG | - | chr5_3:17767464-17767483 | None:intergenic | 10.0% |
| !!! | ATTTTAGTTGATATATTATT+TGG | + | chr5_3:17768048-17768067 | Msa0802920:intron | 10.0% |
| !! | AAATATATAGAAAAAGAAAT+TGG | - | chr5_3:17766083-17766102 | None:intergenic | 10.0% |
| !! | ACAAATATATATCAAAATAT+TGG | - | chr5_3:17767464-17767483 | None:intergenic | 10.0% |
| !!! | ATTTTAGTTGATATATTATT+TGG | + | chr5_3:17768048-17768067 | Msa0802920:intron | 10.0% |
| !!! | CTTTTTATAATTTGATCTTT+TGG | + | chr5_3:17766105-17766124 | Msa0802920:intron | 15.0% |
| !!! | ATTTTAAACTACGTTAAAAA+TGG | + | chr5_3:17766381-17766400 | Msa0802920:intron | 15.0% |
| !! | TCTAATTATCAATATTCATA+AGG | + | chr5_3:17766682-17766701 | Msa0802920:intron | 15.0% |
| !!! | AATTTCTTCATTTAATTTTC+TGG | + | chr5_3:17767840-17767859 | Msa0802920:intron | 15.0% |
| !!! | CTTTTTATAATTTGATCTTT+TGG | + | chr5_3:17766105-17766124 | Msa0802920:intron | 15.0% |
| !!! | ATTTTAAACTACGTTAAAAA+TGG | + | chr5_3:17766381-17766400 | Msa0802920:intron | 15.0% |
| !! | TCTAATTATCAATATTCATA+AGG | + | chr5_3:17766682-17766701 | Msa0802920:intron | 15.0% |
| !!! | AATTTCTTCATTTAATTTTC+TGG | + | chr5_3:17767840-17767859 | Msa0802920:intron | 15.0% |
| !!! | ATTGAGAAATCAAACATTTT+TGG | + | chr5_3:17765946-17765965 | Msa0802920:intron | 20.0% |
| !! | ATGGAGTTAAGATTAAATAT+AGG | + | chr5_3:17766202-17766221 | Msa0802920:CDS | 20.0% |
| !! | AAATGATTCAAGAAAAATGA+TGG | - | chr5_3:17767346-17767365 | None:intergenic | 20.0% |
| !! | TTTGATATATATTTGTGAGT+TGG | + | chr5_3:17767468-17767487 | Msa0802920:intron | 20.0% |
| !! | AACAAATGTAATCATATTCT+AGG | + | chr5_3:17767744-17767763 | Msa0802920:intron | 20.0% |
| !! | ACAAATGTAATCATATTCTA+GGG | + | chr5_3:17767745-17767764 | Msa0802920:intron | 20.0% |
| !!! | TTTTGAAAAATTTCCAACAA+AGG | - | chr5_3:17768250-17768269 | None:intergenic | 20.0% |
| !!! | TTGTTGGAAATTTTTCAAAA+CGG | + | chr5_3:17768250-17768269 | Msa0802920:intron | 20.0% |
| !!! | TCTGAGTTTTTTGTTTTATA+GGG | - | chr5_3:17769444-17769463 | None:intergenic | 20.0% |
| !!! | TTCTGAGTTTTTTGTTTTAT+AGG | - | chr5_3:17769445-17769464 | None:intergenic | 20.0% |
| !!! | GGTAAGTTTTATGAATTAAT+CGG | + | chr5_3:17769613-17769632 | Msa0802920:three_prime_UTR | 20.0% |
| !!! | ATTGAGAAATCAAACATTTT+TGG | + | chr5_3:17765946-17765965 | Msa0802920:intron | 20.0% |
| !! | ATGGAGTTAAGATTAAATAT+AGG | + | chr5_3:17766202-17766221 | Msa0802920:CDS | 20.0% |
| !! | AAATGATTCAAGAAAAATGA+TGG | - | chr5_3:17767346-17767365 | None:intergenic | 20.0% |
| !! | TTTGATATATATTTGTGAGT+TGG | + | chr5_3:17767468-17767487 | Msa0802920:intron | 20.0% |
| !! | AACAAATGTAATCATATTCT+AGG | + | chr5_3:17767744-17767763 | Msa0802920:intron | 20.0% |
| !! | ACAAATGTAATCATATTCTA+GGG | + | chr5_3:17767745-17767764 | Msa0802920:intron | 20.0% |
| !!! | TTTTGAAAAATTTCCAACAA+AGG | - | chr5_3:17768250-17768269 | None:intergenic | 20.0% |
| !!! | TTGTTGGAAATTTTTCAAAA+CGG | + | chr5_3:17768250-17768269 | Msa0802920:intron | 20.0% |
| !!! | TCTGAGTTTTTTGTTTTATA+GGG | - | chr5_3:17769444-17769463 | None:intergenic | 20.0% |
| !!! | TTCTGAGTTTTTTGTTTTAT+AGG | - | chr5_3:17769445-17769464 | None:intergenic | 20.0% |
| !!! | GGTAAGTTTTATGAATTAAT+CGG | + | chr5_3:17769613-17769632 | Msa0802920:three_prime_UTR | 20.0% |
| ! | TTGAGAAAATAACGATGAAT+GGG | - | chr5_3:17765808-17765827 | None:intergenic | 25.0% |
| ! | ATTGAGAAAATAACGATGAA+TGG | - | chr5_3:17765809-17765828 | None:intergenic | 25.0% |
| ! | ATTTGTACATTACAAACAGT+TGG | - | chr5_3:17765928-17765947 | None:intergenic | 25.0% |
| !! | TGAGTTTGATTTATAACTGA+TGG | + | chr5_3:17766132-17766151 | Msa0802920:intron | 25.0% |
| ! | AAGATTAAATATAGGAAGCA+TGG | + | chr5_3:17766210-17766229 | Msa0802920:CDS | 25.0% |
| ! | TAATATTACAATAGAACCCT+AGG | + | chr5_3:17767038-17767057 | Msa0802920:intron | 25.0% |
| !! | ATCAGTTTGACTCTAATTTT+AGG | + | chr5_3:17767111-17767130 | Msa0802920:intron | 25.0% |
| ! | CAAAGATATGTTACAAATTG+AGG | + | chr5_3:17767267-17767286 | Msa0802920:intron | 25.0% |
| !! | ATTAATATCCCTGACATTTT+TGG | - | chr5_3:17767511-17767530 | None:intergenic | 25.0% |
| ! | ATATAGGATTTAAGTGACTA+AGG | - | chr5_3:17767711-17767730 | None:intergenic | 25.0% |
| ! | GTTAATACACTGCAATATAT+AGG | - | chr5_3:17767727-17767746 | None:intergenic | 25.0% |
| ! | ATAAAATTTCTTCGAGTCAA+GGG | - | chr5_3:17768158-17768177 | None:intergenic | 25.0% |
| !! | TGATAGGATTAACTGTTTTA+GGG | - | chr5_3:17768690-17768709 | None:intergenic | 25.0% |
| ! | TGACATTCATTAAGTTTCAT+AGG | - | chr5_3:17769037-17769056 | None:intergenic | 25.0% |
| ! | TGAATGTCATAAACTAAAAC+TGG | + | chr5_3:17769048-17769067 | Msa0802920:intron | 25.0% |
| ! | TCTAAATGTACCTTCTATAT+AGG | + | chr5_3:17769134-17769153 | Msa0802920:intron | 25.0% |
| ! | AAAAAGCCTATACATAAGAT+TGG | + | chr5_3:17769259-17769278 | Msa0802920:CDS | 25.0% |
| ! | AAAAGCCTATACATAAGATT+GGG | + | chr5_3:17769260-17769279 | Msa0802920:CDS | 25.0% |
| !!! | CTGAGTTTTTTGTTTTATAG+GGG | - | chr5_3:17769443-17769462 | None:intergenic | 25.0% |
| ! | TCCAACAAAAAATCATGTTA+CGG | - | chr5_3:17769556-17769575 | None:intergenic | 25.0% |
| !!! | TAACATGATTTTTTGTTGGA+TGG | + | chr5_3:17769556-17769575 | Msa0802920:three_prime_UTR | 25.0% |
| ! | TTGAGAAAATAACGATGAAT+GGG | - | chr5_3:17765808-17765827 | None:intergenic | 25.0% |
| ! | ATTGAGAAAATAACGATGAA+TGG | - | chr5_3:17765809-17765828 | None:intergenic | 25.0% |
| ! | ATTTGTACATTACAAACAGT+TGG | - | chr5_3:17765928-17765947 | None:intergenic | 25.0% |
| !! | TGAGTTTGATTTATAACTGA+TGG | + | chr5_3:17766132-17766151 | Msa0802920:intron | 25.0% |
| ! | AAGATTAAATATAGGAAGCA+TGG | + | chr5_3:17766210-17766229 | Msa0802920:CDS | 25.0% |
| ! | TAATATTACAATAGAACCCT+AGG | + | chr5_3:17767038-17767057 | Msa0802920:intron | 25.0% |
| !! | ATCAGTTTGACTCTAATTTT+AGG | + | chr5_3:17767111-17767130 | Msa0802920:intron | 25.0% |
| ! | CAAAGATATGTTACAAATTG+AGG | + | chr5_3:17767267-17767286 | Msa0802920:intron | 25.0% |
| !! | ATTAATATCCCTGACATTTT+TGG | - | chr5_3:17767511-17767530 | None:intergenic | 25.0% |
| ! | ATATAGGATTTAAGTGACTA+AGG | - | chr5_3:17767711-17767730 | None:intergenic | 25.0% |
| ! | GTTAATACACTGCAATATAT+AGG | - | chr5_3:17767727-17767746 | None:intergenic | 25.0% |
| ! | ATAAAATTTCTTCGAGTCAA+GGG | - | chr5_3:17768158-17768177 | None:intergenic | 25.0% |
| !! | TGATAGGATTAACTGTTTTA+GGG | - | chr5_3:17768690-17768709 | None:intergenic | 25.0% |
| ! | TGACATTCATTAAGTTTCAT+AGG | - | chr5_3:17769037-17769056 | None:intergenic | 25.0% |
| ! | TGAATGTCATAAACTAAAAC+TGG | + | chr5_3:17769048-17769067 | Msa0802920:intron | 25.0% |
| ! | TCTAAATGTACCTTCTATAT+AGG | + | chr5_3:17769134-17769153 | Msa0802920:intron | 25.0% |
| ! | AAAAAGCCTATACATAAGAT+TGG | + | chr5_3:17769259-17769278 | Msa0802920:CDS | 25.0% |
| ! | AAAAGCCTATACATAAGATT+GGG | + | chr5_3:17769260-17769279 | Msa0802920:CDS | 25.0% |
| !!! | CTGAGTTTTTTGTTTTATAG+GGG | - | chr5_3:17769443-17769462 | None:intergenic | 25.0% |
| ! | TCCAACAAAAAATCATGTTA+CGG | - | chr5_3:17769556-17769575 | None:intergenic | 25.0% |
| !!! | TAACATGATTTTTTGTTGGA+TGG | + | chr5_3:17769556-17769575 | Msa0802920:three_prime_UTR | 25.0% |
| TTCTATCTCTATTGGTGAAA+TGG | + | chr5_3:17765665-17765684 | Msa0802920:CDS | 30.0% | |
| !!! | TTGAATGTTTTTCTGGTTGT+GGG | - | chr5_3:17765738-17765757 | None:intergenic | 30.0% |
| ! | GAAGAAGTTGAATGTTTTTC+TGG | - | chr5_3:17765745-17765764 | None:intergenic | 30.0% |
| ! | AAGAAGCACAAAAGACATAT+TGG | + | chr5_3:17766237-17766256 | Msa0802920:CDS | 30.0% |
| TTAGTGTCTATCAACGTAAT+GGG | - | chr5_3:17766313-17766332 | None:intergenic | 30.0% | |
| ATTAGTGTCTATCAACGTAA+TGG | - | chr5_3:17766314-17766333 | None:intergenic | 30.0% | |
| ! | AAAATGATCCTGAGTTGAAA+TGG | + | chr5_3:17766502-17766521 | Msa0802920:CDS | 30.0% |
| GGAGAAATAATTATGCAAAG+TGG | + | chr5_3:17766715-17766734 | Msa0802920:intron | 30.0% | |
| TTTAATGTTCATCTCTTCTC+AGG | + | chr5_3:17766808-17766827 | Msa0802920:intron | 30.0% | |
| ! | AGTAACTCTTTTGTACTTAG+TGG | - | chr5_3:17766840-17766859 | None:intergenic | 30.0% |
| !!! | CTGTACCTTATTTTTTCTTC+CGG | + | chr5_3:17766905-17766924 | Msa0802920:intron | 30.0% |
| !! | AATTTTAGGTACTGCCTTAA+AGG | + | chr5_3:17767125-17767144 | Msa0802920:intron | 30.0% |
| !! | TTTTTGGCAAAGTTCACTTA+AGG | - | chr5_3:17767495-17767514 | None:intergenic | 30.0% |
| !! | AATAGCTCTAAGATAAACCT+CGG | - | chr5_3:17767564-17767583 | None:intergenic | 30.0% |
| !!! | GCATCTTGTTTTAGTATAAG+AGG | + | chr5_3:17767653-17767672 | Msa0802920:intron | 30.0% |
| !!! | TGTTTTAGTATAAGAGGACA+TGG | + | chr5_3:17767659-17767678 | Msa0802920:intron | 30.0% |
| TTTATGCAGGATTTACTGTT+TGG | + | chr5_3:17768000-17768019 | Msa0802920:CDS | 30.0% | |
| TCAAAACAAGATTGGACTAT+TGG | - | chr5_3:17768106-17768125 | None:intergenic | 30.0% | |
| TTCAAGGTTCAAAACAAGAT+TGG | - | chr5_3:17768114-17768133 | None:intergenic | 30.0% | |
| GATAAAATTTCTTCGAGTCA+AGG | - | chr5_3:17768159-17768178 | None:intergenic | 30.0% | |
| TCATTACAAAGATTGTGTGT+TGG | + | chr5_3:17768177-17768196 | Msa0802920:intron | 30.0% | |
| ! | AACAAAGGTTGATTCAATCA+TGG | - | chr5_3:17768235-17768254 | None:intergenic | 30.0% |
| ATGATTGAATCAACCTTTGT+TGG | + | chr5_3:17768234-17768253 | Msa0802920:intron | 30.0% | |
| !! | GAAATTTTTCAAAACGGTGT+GGG | + | chr5_3:17768256-17768275 | Msa0802920:intron | 30.0% |
| AGAAGTGAGAAAACTAAACA+AGG | + | chr5_3:17768292-17768311 | Msa0802920:intron | 30.0% | |
| GAAGTGAGAAAACTAAACAA+GGG | + | chr5_3:17768293-17768312 | Msa0802920:intron | 30.0% | |
| AAGTGAGAAAACTAAACAAG+GGG | + | chr5_3:17768294-17768313 | Msa0802920:intron | 30.0% | |
| ! | CTGATAGGATTAACTGTTTT+AGG | - | chr5_3:17768691-17768710 | None:intergenic | 30.0% |
| !! | CAGAAGTTTGATGTTTTAAG+GGG | - | chr5_3:17768824-17768843 | None:intergenic | 30.0% |
| !! | CCAGAAGTTTGATGTTTTAA+GGG | - | chr5_3:17768825-17768844 | None:intergenic | 30.0% |
| ! | CATTTCGTTAAGAGTATGTT+TGG | + | chr5_3:17768870-17768889 | Msa0802920:intron | 30.0% |
| ! | GCTCAAGATTTTATGTCATA+AGG | + | chr5_3:17769082-17769101 | Msa0802920:intron | 30.0% |
| ! | CCATTTTCATCCTATATAGA+AGG | - | chr5_3:17769147-17769166 | None:intergenic | 30.0% |
| CCTTCTATATAGGATGAAAA+TGG | + | chr5_3:17769144-17769163 | Msa0802920:intron | 30.0% | |
| GAAAATGGAGACTGAAAATA+AGG | + | chr5_3:17769159-17769178 | Msa0802920:intron | 30.0% | |
| !! | CTTTGTGTTCAATTTTGAGT+AGG | - | chr5_3:17769502-17769521 | None:intergenic | 30.0% |
| CTAATCACAAATGATCAACA+TGG | + | chr5_3:17769527-17769546 | Msa0802920:three_prime_UTR | 30.0% | |
| !!! | ACCGTAACATGATTTTTTGT+TGG | + | chr5_3:17769552-17769571 | Msa0802920:three_prime_UTR | 30.0% |
| ATAAAACTTACCAGACAAAG+GGG | - | chr5_3:17769605-17769624 | None:intergenic | 30.0% | |
| CATAAAACTTACCAGACAAA+GGG | - | chr5_3:17769606-17769625 | None:intergenic | 30.0% | |
| TCATAAAACTTACCAGACAA+AGG | - | chr5_3:17769607-17769626 | None:intergenic | 30.0% | |
| TGTTTAATATGTGTGACCAT+TGG | + | chr5_3:17769659-17769678 | Msa0802920:three_prime_UTR | 30.0% | |
| CTTACAAAGTGAAAAAACTC+AGG | - | chr5_3:17769695-17769714 | None:intergenic | 30.0% | |
| TTCTATCTCTATTGGTGAAA+TGG | + | chr5_3:17765665-17765684 | Msa0802920:CDS | 30.0% | |
| !!! | TTGAATGTTTTTCTGGTTGT+GGG | - | chr5_3:17765738-17765757 | None:intergenic | 30.0% |
| ! | GAAGAAGTTGAATGTTTTTC+TGG | - | chr5_3:17765745-17765764 | None:intergenic | 30.0% |
| ! | AAGAAGCACAAAAGACATAT+TGG | + | chr5_3:17766237-17766256 | Msa0802920:CDS | 30.0% |
| TTAGTGTCTATCAACGTAAT+GGG | - | chr5_3:17766313-17766332 | None:intergenic | 30.0% | |
| ATTAGTGTCTATCAACGTAA+TGG | - | chr5_3:17766314-17766333 | None:intergenic | 30.0% | |
| ! | AAAATGATCCTGAGTTGAAA+TGG | + | chr5_3:17766502-17766521 | Msa0802920:CDS | 30.0% |
| GGAGAAATAATTATGCAAAG+TGG | + | chr5_3:17766715-17766734 | Msa0802920:intron | 30.0% | |
| TTTAATGTTCATCTCTTCTC+AGG | + | chr5_3:17766808-17766827 | Msa0802920:intron | 30.0% | |
| ! | AGTAACTCTTTTGTACTTAG+TGG | - | chr5_3:17766840-17766859 | None:intergenic | 30.0% |
| !!! | CTGTACCTTATTTTTTCTTC+CGG | + | chr5_3:17766905-17766924 | Msa0802920:intron | 30.0% |
| !! | AATTTTAGGTACTGCCTTAA+AGG | + | chr5_3:17767125-17767144 | Msa0802920:intron | 30.0% |
| !! | TTTTTGGCAAAGTTCACTTA+AGG | - | chr5_3:17767495-17767514 | None:intergenic | 30.0% |
| !! | AATAGCTCTAAGATAAACCT+CGG | - | chr5_3:17767564-17767583 | None:intergenic | 30.0% |
| !!! | GCATCTTGTTTTAGTATAAG+AGG | + | chr5_3:17767653-17767672 | Msa0802920:intron | 30.0% |
| !!! | TGTTTTAGTATAAGAGGACA+TGG | + | chr5_3:17767659-17767678 | Msa0802920:intron | 30.0% |
| TTTATGCAGGATTTACTGTT+TGG | + | chr5_3:17768000-17768019 | Msa0802920:CDS | 30.0% | |
| TCAAAACAAGATTGGACTAT+TGG | - | chr5_3:17768106-17768125 | None:intergenic | 30.0% | |
| TTCAAGGTTCAAAACAAGAT+TGG | - | chr5_3:17768114-17768133 | None:intergenic | 30.0% | |
| GATAAAATTTCTTCGAGTCA+AGG | - | chr5_3:17768159-17768178 | None:intergenic | 30.0% | |
| TCATTACAAAGATTGTGTGT+TGG | + | chr5_3:17768177-17768196 | Msa0802920:intron | 30.0% | |
| ! | AACAAAGGTTGATTCAATCA+TGG | - | chr5_3:17768235-17768254 | None:intergenic | 30.0% |
| ATGATTGAATCAACCTTTGT+TGG | + | chr5_3:17768234-17768253 | Msa0802920:intron | 30.0% | |
| !! | GAAATTTTTCAAAACGGTGT+GGG | + | chr5_3:17768256-17768275 | Msa0802920:intron | 30.0% |
| AGAAGTGAGAAAACTAAACA+AGG | + | chr5_3:17768292-17768311 | Msa0802920:intron | 30.0% | |
| GAAGTGAGAAAACTAAACAA+GGG | + | chr5_3:17768293-17768312 | Msa0802920:intron | 30.0% | |
| AAGTGAGAAAACTAAACAAG+GGG | + | chr5_3:17768294-17768313 | Msa0802920:intron | 30.0% | |
| ! | CTGATAGGATTAACTGTTTT+AGG | - | chr5_3:17768691-17768710 | None:intergenic | 30.0% |
| !! | CAGAAGTTTGATGTTTTAAG+GGG | - | chr5_3:17768824-17768843 | None:intergenic | 30.0% |
| !! | CCAGAAGTTTGATGTTTTAA+GGG | - | chr5_3:17768825-17768844 | None:intergenic | 30.0% |
| ! | CATTTCGTTAAGAGTATGTT+TGG | + | chr5_3:17768870-17768889 | Msa0802920:intron | 30.0% |
| ! | GCTCAAGATTTTATGTCATA+AGG | + | chr5_3:17769082-17769101 | Msa0802920:intron | 30.0% |
| ! | CCATTTTCATCCTATATAGA+AGG | - | chr5_3:17769147-17769166 | None:intergenic | 30.0% |
| CCTTCTATATAGGATGAAAA+TGG | + | chr5_3:17769144-17769163 | Msa0802920:intron | 30.0% | |
| GAAAATGGAGACTGAAAATA+AGG | + | chr5_3:17769159-17769178 | Msa0802920:intron | 30.0% | |
| !! | CTTTGTGTTCAATTTTGAGT+AGG | - | chr5_3:17769502-17769521 | None:intergenic | 30.0% |
| CTAATCACAAATGATCAACA+TGG | + | chr5_3:17769527-17769546 | Msa0802920:three_prime_UTR | 30.0% | |
| !!! | ACCGTAACATGATTTTTTGT+TGG | + | chr5_3:17769552-17769571 | Msa0802920:three_prime_UTR | 30.0% |
| ATAAAACTTACCAGACAAAG+GGG | - | chr5_3:17769605-17769624 | None:intergenic | 30.0% | |
| CATAAAACTTACCAGACAAA+GGG | - | chr5_3:17769606-17769625 | None:intergenic | 30.0% | |
| TCATAAAACTTACCAGACAA+AGG | - | chr5_3:17769607-17769626 | None:intergenic | 30.0% | |
| TGTTTAATATGTGTGACCAT+TGG | + | chr5_3:17769659-17769678 | Msa0802920:three_prime_UTR | 30.0% | |
| CTTACAAAGTGAAAAAACTC+AGG | - | chr5_3:17769695-17769714 | None:intergenic | 30.0% | |
| TCTCCATCTTCTATCTCTAT+TGG | + | chr5_3:17765657-17765676 | Msa0802920:CDS | 35.0% | |
| TCACCAATAGAGATAGAAGA+TGG | - | chr5_3:17765663-17765682 | None:intergenic | 35.0% | |
| !!! | GTTGAATGTTTTTCTGGTTG+TGG | - | chr5_3:17765739-17765758 | None:intergenic | 35.0% |
| ! | GAACGAAGTGAGTTGAAATT+TGG | - | chr5_3:17765780-17765799 | None:intergenic | 35.0% |
| CAGTTGGATAAGTAAACAGT+TGG | - | chr5_3:17765912-17765931 | None:intergenic | 35.0% | |
| AATGTTGCTAAGTGTGTGTT+TGG | + | chr5_3:17765984-17766003 | Msa0802920:intron | 35.0% | |
| !! | AGGACGATGAAAATTGGTTT+TGG | + | chr5_3:17766011-17766030 | Msa0802920:intron | 35.0% |
| ! | TTCTGATAATGCTTCAGAGA+TGG | + | chr5_3:17766183-17766202 | Msa0802920:CDS | 35.0% |
| ! | ACACTAATCCTCTTTTTGAC+AGG | + | chr5_3:17766326-17766345 | Msa0802920:CDS | 35.0% |
| GGTTTAATCCTGTCAAAAAG+AGG | - | chr5_3:17766337-17766356 | None:intergenic | 35.0% | |
| ! | TTTTGACAGGATTAAACCCT+CGG | + | chr5_3:17766339-17766358 | Msa0802920:CDS | 35.0% |
| TTAAACCCTCGGAAACAATA+TGG | + | chr5_3:17766350-17766369 | Msa0802920:CDS | 35.0% | |
| ACAAACCATATTGTTTCCGA+GGG | - | chr5_3:17766358-17766377 | None:intergenic | 35.0% | |
| ! | TGGAATTTTGAACCGTATTG+TGG | + | chr5_3:17766401-17766420 | Msa0802920:intron | 35.0% |
| ! | GGAATTTTGAACCGTATTGT+GGG | + | chr5_3:17766402-17766421 | Msa0802920:intron | 35.0% |
| !! | TGGTTGAATGGTTCTGATTT+GGG | + | chr5_3:17766438-17766457 | Msa0802920:intron | 35.0% |
| TATAGATGACGATCATCTTG+TGG | + | chr5_3:17766467-17766486 | Msa0802920:CDS | 35.0% | |
| GGAACATCAATCTATCTTGT+CGG | + | chr5_3:17766582-17766601 | Msa0802920:CDS | 35.0% | |
| ! | CACTTTATGGTTGATTTCAG+TGG | - | chr5_3:17766613-17766632 | None:intergenic | 35.0% |
| CACTGAAATCAACCATAAAG+TGG | + | chr5_3:17766611-17766630 | Msa0802920:CDS | 35.0% | |
| TATTCATAAGGCTCGTAACT+AGG | + | chr5_3:17766694-17766713 | Msa0802920:intron | 35.0% | |
| AACTTATTCCAACCAAACTG+TGG | + | chr5_3:17766863-17766882 | Msa0802920:CDS | 35.0% | |
| ACTTACATGAATCCACAGTT+TGG | - | chr5_3:17766878-17766897 | None:intergenic | 35.0% | |
| GACATCCGGAAGAAAAAATA+AGG | - | chr5_3:17766913-17766932 | None:intergenic | 35.0% | |
| !!! | ATTTTTTCTTCCGGATGTCT+TGG | + | chr5_3:17766914-17766933 | Msa0802920:intron | 35.0% |
| !!! | TTTTTTCTTCCGGATGTCTT+GGG | + | chr5_3:17766915-17766934 | Msa0802920:intron | 35.0% |
| CTGGTAAGAGACATTACTAT+AGG | - | chr5_3:17767080-17767099 | None:intergenic | 35.0% | |
| AAACTGATACACGTACTATC+TGG | - | chr5_3:17767099-17767118 | None:intergenic | 35.0% | |
| GTCTAGACTTAAAGCCTTTA+AGG | - | chr5_3:17767142-17767161 | None:intergenic | 35.0% | |
| TTCCATGTGACACTGATAAT+GGG | - | chr5_3:17767191-17767210 | None:intergenic | 35.0% | |
| AGTCGAAGTAACACACATAA+CGG | - | chr5_3:17767245-17767264 | None:intergenic | 35.0% | |
| AAAAGCCATGAATTGCATCA+AGG | - | chr5_3:17767320-17767339 | None:intergenic | 35.0% | |
| !!! | TCTGTTTGTGAGTTGGTTTT+TGG | + | chr5_3:17767429-17767448 | Msa0802920:intron | 35.0% |
| !!! | TTTGTGAGTTGGTTTTTGGA+GGG | + | chr5_3:17767433-17767452 | Msa0802920:intron | 35.0% |
| TGAACTTTGCCAAAAATGTC+AGG | + | chr5_3:17767499-17767518 | Msa0802920:intron | 35.0% | |
| GAACTTTGCCAAAAATGTCA+GGG | + | chr5_3:17767500-17767519 | Msa0802920:intron | 35.0% | |
| !! | ATAGCTCTAAGATAAACCTC+GGG | - | chr5_3:17767563-17767582 | None:intergenic | 35.0% |
| ! | CGCTAATATCTTTCGAGTAA+GGG | - | chr5_3:17767626-17767645 | None:intergenic | 35.0% |
| ! | ACGCTAATATCTTTCGAGTA+AGG | - | chr5_3:17767627-17767646 | None:intergenic | 35.0% |
| TTACTCGAAAGATATTAGCG+TGG | + | chr5_3:17767626-17767645 | Msa0802920:intron | 35.0% | |
| ! | CTGTACTTGAAAGCATAAGT+AGG | + | chr5_3:17767811-17767830 | Msa0802920:CDS | 35.0% |
| !! | TCTGGATACTTTTTGTTGCT+AGG | + | chr5_3:17767858-17767877 | Msa0802920:intron | 35.0% |
| !!! | TGACTCATCTCTTGTTTTCA+AGG | - | chr5_3:17768130-17768149 | None:intergenic | 35.0% |
| TACAAAGATTGTGTGTTGGA+TGG | + | chr5_3:17768181-17768200 | Msa0802920:intron | 35.0% | |
| ACAAAGATTGTGTGTTGGAT+GGG | + | chr5_3:17768182-17768201 | Msa0802920:intron | 35.0% | |
| !! | GGAAATTTTTCAAAACGGTG+TGG | + | chr5_3:17768255-17768274 | Msa0802920:intron | 35.0% |
| ATACAGATGAAGATTCAGCA+AGG | + | chr5_3:17768543-17768562 | Msa0802920:intron | 35.0% | |
| TACAGATGAAGATTCAGCAA+GGG | + | chr5_3:17768544-17768563 | Msa0802920:intron | 35.0% | |
| AGATGTGGTTGTGAAATTAC+AGG | + | chr5_3:17768616-17768635 | Msa0802920:CDS | 35.0% | |
| GATGTGGTTGTGAAATTACA+GGG | + | chr5_3:17768617-17768636 | Msa0802920:CDS | 35.0% | |
| AATAAATCAGCACAACTACC+TGG | - | chr5_3:17768725-17768744 | None:intergenic | 35.0% | |
| ACTCAAACAGTCAAATGGAT+TGG | - | chr5_3:17768776-17768795 | None:intergenic | 35.0% | |
| TGACTACTCAAACAGTCAAA+TGG | - | chr5_3:17768781-17768800 | None:intergenic | 35.0% | |
| CCCTTAAAACATCAAACTTC+TGG | + | chr5_3:17768822-17768841 | Msa0802920:intron | 35.0% | |
| ! | GCCAGAAGTTTGATGTTTTA+AGG | - | chr5_3:17768826-17768845 | None:intergenic | 35.0% |
| GACATCCCAATCTTATGTAT+AGG | - | chr5_3:17769268-17769287 | None:intergenic | 35.0% | |
| !!! | CAAATTTTTTCAGCAACAGC+TGG | + | chr5_3:17769399-17769418 | Msa0802920:three_prime_UTR | 35.0% |
| TCTCCATCTTCTATCTCTAT+TGG | + | chr5_3:17765657-17765676 | Msa0802920:CDS | 35.0% | |
| TCACCAATAGAGATAGAAGA+TGG | - | chr5_3:17765663-17765682 | None:intergenic | 35.0% | |
| !!! | GTTGAATGTTTTTCTGGTTG+TGG | - | chr5_3:17765739-17765758 | None:intergenic | 35.0% |
| ! | GAACGAAGTGAGTTGAAATT+TGG | - | chr5_3:17765780-17765799 | None:intergenic | 35.0% |
| CAGTTGGATAAGTAAACAGT+TGG | - | chr5_3:17765912-17765931 | None:intergenic | 35.0% | |
| AATGTTGCTAAGTGTGTGTT+TGG | + | chr5_3:17765984-17766003 | Msa0802920:intron | 35.0% | |
| !! | AGGACGATGAAAATTGGTTT+TGG | + | chr5_3:17766011-17766030 | Msa0802920:intron | 35.0% |
| ! | TTCTGATAATGCTTCAGAGA+TGG | + | chr5_3:17766183-17766202 | Msa0802920:CDS | 35.0% |
| ! | ACACTAATCCTCTTTTTGAC+AGG | + | chr5_3:17766326-17766345 | Msa0802920:CDS | 35.0% |
| GGTTTAATCCTGTCAAAAAG+AGG | - | chr5_3:17766337-17766356 | None:intergenic | 35.0% | |
| ! | TTTTGACAGGATTAAACCCT+CGG | + | chr5_3:17766339-17766358 | Msa0802920:CDS | 35.0% |
| TTAAACCCTCGGAAACAATA+TGG | + | chr5_3:17766350-17766369 | Msa0802920:CDS | 35.0% | |
| ACAAACCATATTGTTTCCGA+GGG | - | chr5_3:17766358-17766377 | None:intergenic | 35.0% | |
| ! | TGGAATTTTGAACCGTATTG+TGG | + | chr5_3:17766401-17766420 | Msa0802920:intron | 35.0% |
| ! | GGAATTTTGAACCGTATTGT+GGG | + | chr5_3:17766402-17766421 | Msa0802920:intron | 35.0% |
| !! | TGGTTGAATGGTTCTGATTT+GGG | + | chr5_3:17766438-17766457 | Msa0802920:intron | 35.0% |
| TATAGATGACGATCATCTTG+TGG | + | chr5_3:17766467-17766486 | Msa0802920:CDS | 35.0% | |
| GGAACATCAATCTATCTTGT+CGG | + | chr5_3:17766582-17766601 | Msa0802920:CDS | 35.0% | |
| ! | CACTTTATGGTTGATTTCAG+TGG | - | chr5_3:17766613-17766632 | None:intergenic | 35.0% |
| CACTGAAATCAACCATAAAG+TGG | + | chr5_3:17766611-17766630 | Msa0802920:CDS | 35.0% | |
| TATTCATAAGGCTCGTAACT+AGG | + | chr5_3:17766694-17766713 | Msa0802920:intron | 35.0% | |
| AACTTATTCCAACCAAACTG+TGG | + | chr5_3:17766863-17766882 | Msa0802920:CDS | 35.0% | |
| ACTTACATGAATCCACAGTT+TGG | - | chr5_3:17766878-17766897 | None:intergenic | 35.0% | |
| GACATCCGGAAGAAAAAATA+AGG | - | chr5_3:17766913-17766932 | None:intergenic | 35.0% | |
| !!! | ATTTTTTCTTCCGGATGTCT+TGG | + | chr5_3:17766914-17766933 | Msa0802920:intron | 35.0% |
| !!! | TTTTTTCTTCCGGATGTCTT+GGG | + | chr5_3:17766915-17766934 | Msa0802920:intron | 35.0% |
| CTGGTAAGAGACATTACTAT+AGG | - | chr5_3:17767080-17767099 | None:intergenic | 35.0% | |
| AAACTGATACACGTACTATC+TGG | - | chr5_3:17767099-17767118 | None:intergenic | 35.0% | |
| GTCTAGACTTAAAGCCTTTA+AGG | - | chr5_3:17767142-17767161 | None:intergenic | 35.0% | |
| TTCCATGTGACACTGATAAT+GGG | - | chr5_3:17767191-17767210 | None:intergenic | 35.0% | |
| AGTCGAAGTAACACACATAA+CGG | - | chr5_3:17767245-17767264 | None:intergenic | 35.0% | |
| AAAAGCCATGAATTGCATCA+AGG | - | chr5_3:17767320-17767339 | None:intergenic | 35.0% | |
| !!! | TCTGTTTGTGAGTTGGTTTT+TGG | + | chr5_3:17767429-17767448 | Msa0802920:intron | 35.0% |
| !!! | TTTGTGAGTTGGTTTTTGGA+GGG | + | chr5_3:17767433-17767452 | Msa0802920:intron | 35.0% |
| TGAACTTTGCCAAAAATGTC+AGG | + | chr5_3:17767499-17767518 | Msa0802920:intron | 35.0% | |
| GAACTTTGCCAAAAATGTCA+GGG | + | chr5_3:17767500-17767519 | Msa0802920:intron | 35.0% | |
| !! | ATAGCTCTAAGATAAACCTC+GGG | - | chr5_3:17767563-17767582 | None:intergenic | 35.0% |
| ! | CGCTAATATCTTTCGAGTAA+GGG | - | chr5_3:17767626-17767645 | None:intergenic | 35.0% |
| ! | ACGCTAATATCTTTCGAGTA+AGG | - | chr5_3:17767627-17767646 | None:intergenic | 35.0% |
| TTACTCGAAAGATATTAGCG+TGG | + | chr5_3:17767626-17767645 | Msa0802920:intron | 35.0% | |
| ! | CTGTACTTGAAAGCATAAGT+AGG | + | chr5_3:17767811-17767830 | Msa0802920:CDS | 35.0% |
| !! | TCTGGATACTTTTTGTTGCT+AGG | + | chr5_3:17767858-17767877 | Msa0802920:intron | 35.0% |
| !!! | TGACTCATCTCTTGTTTTCA+AGG | - | chr5_3:17768130-17768149 | None:intergenic | 35.0% |
| TACAAAGATTGTGTGTTGGA+TGG | + | chr5_3:17768181-17768200 | Msa0802920:intron | 35.0% | |
| ACAAAGATTGTGTGTTGGAT+GGG | + | chr5_3:17768182-17768201 | Msa0802920:intron | 35.0% | |
| !! | GGAAATTTTTCAAAACGGTG+TGG | + | chr5_3:17768255-17768274 | Msa0802920:intron | 35.0% |
| ATACAGATGAAGATTCAGCA+AGG | + | chr5_3:17768543-17768562 | Msa0802920:intron | 35.0% | |
| TACAGATGAAGATTCAGCAA+GGG | + | chr5_3:17768544-17768563 | Msa0802920:intron | 35.0% | |
| AGATGTGGTTGTGAAATTAC+AGG | + | chr5_3:17768616-17768635 | Msa0802920:CDS | 35.0% | |
| GATGTGGTTGTGAAATTACA+GGG | + | chr5_3:17768617-17768636 | Msa0802920:CDS | 35.0% | |
| AATAAATCAGCACAACTACC+TGG | - | chr5_3:17768725-17768744 | None:intergenic | 35.0% | |
| ACTCAAACAGTCAAATGGAT+TGG | - | chr5_3:17768776-17768795 | None:intergenic | 35.0% | |
| TGACTACTCAAACAGTCAAA+TGG | - | chr5_3:17768781-17768800 | None:intergenic | 35.0% | |
| CCCTTAAAACATCAAACTTC+TGG | + | chr5_3:17768822-17768841 | Msa0802920:intron | 35.0% | |
| ! | GCCAGAAGTTTGATGTTTTA+AGG | - | chr5_3:17768826-17768845 | None:intergenic | 35.0% |
| GACATCCCAATCTTATGTAT+AGG | - | chr5_3:17769268-17769287 | None:intergenic | 35.0% | |
| !!! | CAAATTTTTTCAGCAACAGC+TGG | + | chr5_3:17769399-17769418 | Msa0802920:three_prime_UTR | 35.0% |
| !!! | GTTTTTCTGGTTGTGGGATT+TGG | - | chr5_3:17765732-17765751 | None:intergenic | 40.0% |
| AGTAAGTACCTCGTAAGTTG+TGG | - | chr5_3:17765886-17765905 | None:intergenic | 40.0% | |
| !! | CTAAGTGTGTGTTTGGTTCT+AGG | + | chr5_3:17765991-17766010 | Msa0802920:intron | 40.0% |
| !! | GGTTCTAGGACGATGAAAAT+TGG | + | chr5_3:17766005-17766024 | Msa0802920:intron | 40.0% |
| ! | ACTATCAGAGTTTTGCAGTC+AGG | + | chr5_3:17766283-17766302 | Msa0802920:CDS | 40.0% |
| CACAAACCATATTGTTTCCG+AGG | - | chr5_3:17766359-17766378 | None:intergenic | 40.0% | |
| ! | TTTTCGCCTTTGTGGTTGAA+TGG | + | chr5_3:17766426-17766445 | Msa0802920:intron | 40.0% |
| TCAGAACCATTCAACCACAA+AGG | - | chr5_3:17766435-17766454 | None:intergenic | 40.0% | |
| !! | GTGGTTGAATGGTTCTGATT+TGG | + | chr5_3:17766437-17766456 | Msa0802920:intron | 40.0% |
| ! | GGATCATCACAGCTTTTGAA+AGG | + | chr5_3:17766561-17766580 | Msa0802920:CDS | 40.0% |
| CAGAATCGCACATCAATCAT+AGG | - | chr5_3:17766760-17766779 | None:intergenic | 40.0% | |
| TGATGTGCGATTCTGATCAA+TGG | + | chr5_3:17766765-17766784 | Msa0802920:intron | 40.0% | |
| ACATGAATCCACAGTTTGGT+TGG | - | chr5_3:17766874-17766893 | None:intergenic | 40.0% | |
| CACTCACACAATTCATCCTA+GGG | - | chr5_3:17767057-17767076 | None:intergenic | 40.0% | |
| !! | ACACTGATAATGGGCAGAAT+TGG | - | chr5_3:17767182-17767201 | None:intergenic | 40.0% |
| CTTCCATGTGACACTGATAA+TGG | - | chr5_3:17767192-17767211 | None:intergenic | 40.0% | |
| TACAAATTGAGGAACCAGTC+TGG | + | chr5_3:17767278-17767297 | Msa0802920:intron | 40.0% | |
| ATGAATTGCATCAAGGACAG+AGG | - | chr5_3:17767313-17767332 | None:intergenic | 40.0% | |
| TCTGTCCTTGATGCAATTCA+TGG | + | chr5_3:17767312-17767331 | Msa0802920:intron | 40.0% | |
| !! | TATCATGGCCAACCACTTTT+GGG | - | chr5_3:17767387-17767406 | None:intergenic | 40.0% |
| ! | TTATCATGGCCAACCACTTT+TGG | - | chr5_3:17767388-17767407 | None:intergenic | 40.0% |
| !!! | GTTTGTGAGTTGGTTTTTGG+AGG | + | chr5_3:17767432-17767451 | Msa0802920:intron | 40.0% |
| !! | TAGCTCTAAGATAAACCTCG+GGG | - | chr5_3:17767562-17767581 | None:intergenic | 40.0% |
| GCAACATTAGGAGGTAAACA+TGG | + | chr5_3:17767945-17767964 | Msa0802920:CDS | 40.0% | |
| CTGCTGGAAGATCTGATAAA+TGG | + | chr5_3:17767970-17767989 | Msa0802920:CDS | 40.0% | |
| AAATGGCGACATCTTTATGC+AGG | + | chr5_3:17767987-17768006 | Msa0802920:CDS | 40.0% | |
| CAAAGATTGTGTGTTGGATG+GGG | + | chr5_3:17768183-17768202 | Msa0802920:intron | 40.0% | |
| !! | ATTTTTCAAAACGGTGTGGG+TGG | + | chr5_3:17768259-17768278 | Msa0802920:intron | 40.0% |
| !! | TTTTTCAAAACGGTGTGGGT+GGG | + | chr5_3:17768260-17768279 | Msa0802920:intron | 40.0% |
| TGCATATACGAATGCAGATG+TGG | + | chr5_3:17768601-17768620 | Msa0802920:CDS | 40.0% | |
| TGGTTGTGAAATTACAGGGA+TGG | + | chr5_3:17768621-17768640 | Msa0802920:CDS | 40.0% | |
| GGTTGTGAAATTACAGGGAT+GGG | + | chr5_3:17768622-17768641 | Msa0802920:CDS | 40.0% | |
| TCCTGCTTATGCTAAAAGTG+TGG | + | chr5_3:17768646-17768665 | Msa0802920:CDS | 40.0% | |
| ! | TTATGCTAAAAGTGTGGCAC+AGG | + | chr5_3:17768652-17768671 | Msa0802920:CDS | 40.0% |
| ! | TATGCTAAAAGTGTGGCACA+GGG | + | chr5_3:17768653-17768672 | Msa0802920:CDS | 40.0% |
| CTGGAAGTTTCTTGTCTGAT+AGG | - | chr5_3:17768706-17768725 | None:intergenic | 40.0% | |
| CTATCAGACAAGAAACTTCC+AGG | + | chr5_3:17768704-17768723 | Msa0802920:CDS | 40.0% | |
| AAACTTCTGGCCTGATAACT+TGG | + | chr5_3:17768835-17768854 | Msa0802920:intron | 40.0% | |
| AAGCAACTGTCCAAGTTATC+AGG | - | chr5_3:17768848-17768867 | None:intergenic | 40.0% | |
| TACATAAGATTGGGATGTCG+TGG | + | chr5_3:17769269-17769288 | Msa0802920:CDS | 40.0% | |
| !!! | GTTTTTCTGGTTGTGGGATT+TGG | - | chr5_3:17765732-17765751 | None:intergenic | 40.0% |
| AGTAAGTACCTCGTAAGTTG+TGG | - | chr5_3:17765886-17765905 | None:intergenic | 40.0% | |
| !! | CTAAGTGTGTGTTTGGTTCT+AGG | + | chr5_3:17765991-17766010 | Msa0802920:intron | 40.0% |
| !! | GGTTCTAGGACGATGAAAAT+TGG | + | chr5_3:17766005-17766024 | Msa0802920:intron | 40.0% |
| ! | ACTATCAGAGTTTTGCAGTC+AGG | + | chr5_3:17766283-17766302 | Msa0802920:CDS | 40.0% |
| CACAAACCATATTGTTTCCG+AGG | - | chr5_3:17766359-17766378 | None:intergenic | 40.0% | |
| ! | TTTTCGCCTTTGTGGTTGAA+TGG | + | chr5_3:17766426-17766445 | Msa0802920:intron | 40.0% |
| TCAGAACCATTCAACCACAA+AGG | - | chr5_3:17766435-17766454 | None:intergenic | 40.0% | |
| !! | GTGGTTGAATGGTTCTGATT+TGG | + | chr5_3:17766437-17766456 | Msa0802920:intron | 40.0% |
| ! | GGATCATCACAGCTTTTGAA+AGG | + | chr5_3:17766561-17766580 | Msa0802920:CDS | 40.0% |
| CAGAATCGCACATCAATCAT+AGG | - | chr5_3:17766760-17766779 | None:intergenic | 40.0% | |
| TGATGTGCGATTCTGATCAA+TGG | + | chr5_3:17766765-17766784 | Msa0802920:intron | 40.0% | |
| ACATGAATCCACAGTTTGGT+TGG | - | chr5_3:17766874-17766893 | None:intergenic | 40.0% | |
| CACTCACACAATTCATCCTA+GGG | - | chr5_3:17767057-17767076 | None:intergenic | 40.0% | |
| !! | ACACTGATAATGGGCAGAAT+TGG | - | chr5_3:17767182-17767201 | None:intergenic | 40.0% |
| CTTCCATGTGACACTGATAA+TGG | - | chr5_3:17767192-17767211 | None:intergenic | 40.0% | |
| TACAAATTGAGGAACCAGTC+TGG | + | chr5_3:17767278-17767297 | Msa0802920:intron | 40.0% | |
| ATGAATTGCATCAAGGACAG+AGG | - | chr5_3:17767313-17767332 | None:intergenic | 40.0% | |
| TCTGTCCTTGATGCAATTCA+TGG | + | chr5_3:17767312-17767331 | Msa0802920:intron | 40.0% | |
| !! | TATCATGGCCAACCACTTTT+GGG | - | chr5_3:17767387-17767406 | None:intergenic | 40.0% |
| ! | TTATCATGGCCAACCACTTT+TGG | - | chr5_3:17767388-17767407 | None:intergenic | 40.0% |
| !!! | GTTTGTGAGTTGGTTTTTGG+AGG | + | chr5_3:17767432-17767451 | Msa0802920:intron | 40.0% |
| !! | TAGCTCTAAGATAAACCTCG+GGG | - | chr5_3:17767562-17767581 | None:intergenic | 40.0% |
| GCAACATTAGGAGGTAAACA+TGG | + | chr5_3:17767945-17767964 | Msa0802920:CDS | 40.0% | |
| CTGCTGGAAGATCTGATAAA+TGG | + | chr5_3:17767970-17767989 | Msa0802920:CDS | 40.0% | |
| AAATGGCGACATCTTTATGC+AGG | + | chr5_3:17767987-17768006 | Msa0802920:CDS | 40.0% | |
| CAAAGATTGTGTGTTGGATG+GGG | + | chr5_3:17768183-17768202 | Msa0802920:intron | 40.0% | |
| !! | ATTTTTCAAAACGGTGTGGG+TGG | + | chr5_3:17768259-17768278 | Msa0802920:intron | 40.0% |
| !! | TTTTTCAAAACGGTGTGGGT+GGG | + | chr5_3:17768260-17768279 | Msa0802920:intron | 40.0% |
| TGCATATACGAATGCAGATG+TGG | + | chr5_3:17768601-17768620 | Msa0802920:CDS | 40.0% | |
| TGGTTGTGAAATTACAGGGA+TGG | + | chr5_3:17768621-17768640 | Msa0802920:CDS | 40.0% | |
| GGTTGTGAAATTACAGGGAT+GGG | + | chr5_3:17768622-17768641 | Msa0802920:CDS | 40.0% | |
| TCCTGCTTATGCTAAAAGTG+TGG | + | chr5_3:17768646-17768665 | Msa0802920:CDS | 40.0% | |
| ! | TTATGCTAAAAGTGTGGCAC+AGG | + | chr5_3:17768652-17768671 | Msa0802920:CDS | 40.0% |
| ! | TATGCTAAAAGTGTGGCACA+GGG | + | chr5_3:17768653-17768672 | Msa0802920:CDS | 40.0% |
| CTGGAAGTTTCTTGTCTGAT+AGG | - | chr5_3:17768706-17768725 | None:intergenic | 40.0% | |
| CTATCAGACAAGAAACTTCC+AGG | + | chr5_3:17768704-17768723 | Msa0802920:CDS | 40.0% | |
| AAACTTCTGGCCTGATAACT+TGG | + | chr5_3:17768835-17768854 | Msa0802920:intron | 40.0% | |
| AAGCAACTGTCCAAGTTATC+AGG | - | chr5_3:17768848-17768867 | None:intergenic | 40.0% | |
| TACATAAGATTGGGATGTCG+TGG | + | chr5_3:17769269-17769288 | Msa0802920:CDS | 40.0% | |
| !! | TTTCTGGTTGTGGGATTTGG+AGG | - | chr5_3:17765729-17765748 | None:intergenic | 45.0% |
| AGCATTTGCAGGGAGAAAGA+GGG | - | chr5_3:17765842-17765861 | None:intergenic | 45.0% | |
| ! | GTAAGTTGTGGTGGAAACAG+GGG | - | chr5_3:17765874-17765893 | None:intergenic | 45.0% |
| ! | CGTAAGTTGTGGTGGAAACA+GGG | - | chr5_3:17765875-17765894 | None:intergenic | 45.0% |
| ! | TCGTAAGTTGTGGTGGAAAC+AGG | - | chr5_3:17765876-17765895 | None:intergenic | 45.0% |
| TGTTTCCACCACAACTTACG+AGG | + | chr5_3:17765875-17765894 | Msa0802920:CDS | 45.0% | |
| AAGTACCTCGTAAGTTGTGG+TGG | - | chr5_3:17765883-17765902 | None:intergenic | 45.0% | |
| AAGGCGAAAAGCCCACAATA+CGG | - | chr5_3:17766416-17766435 | None:intergenic | 45.0% | |
| !! | TGAATGGTTCTGATTTGGGC+AGG | + | chr5_3:17766442-17766461 | Msa0802920:intron | 45.0% |
| ATGTCAGGCCATTTCAACTC+AGG | - | chr5_3:17766513-17766532 | None:intergenic | 45.0% | |
| GTTGAAATGGCCTGACATCA+TGG | + | chr5_3:17766515-17766534 | Msa0802920:CDS | 45.0% | |
| GCCTGACATCATGGAATCAT+GGG | + | chr5_3:17766524-17766543 | Msa0802920:CDS | 45.0% | |
| TCCCATGATTCCATGATGTC+AGG | - | chr5_3:17766528-17766547 | None:intergenic | 45.0% | |
| ! | CAAGCTCTTCAGCCACTTTA+TGG | - | chr5_3:17766626-17766645 | None:intergenic | 45.0% |
| AAGGAATAGCCCAAGACATC+CGG | - | chr5_3:17766927-17766946 | None:intergenic | 45.0% | |
| GCACTCACACAATTCATCCT+AGG | - | chr5_3:17767058-17767077 | None:intergenic | 45.0% | |
| TGCCCATTATCAGTGTCACA+TGG | + | chr5_3:17767186-17767205 | Msa0802920:intron | 45.0% | |
| CACACATAACGGCTACAGAA+AGG | - | chr5_3:17767234-17767253 | None:intergenic | 45.0% | |
| AGAGGAGGAAAAAACCAGAC+TGG | - | chr5_3:17767295-17767314 | None:intergenic | 45.0% | |
| AATTGCATCAAGGACAGAGG+AGG | - | chr5_3:17767310-17767329 | None:intergenic | 45.0% | |
| AATCATTTCAGACCCCATCC+CGG | + | chr5_3:17767358-17767377 | Msa0802920:intron | 45.0% | |
| ! | AGTGGTTGGCCATGATAAAG+TGG | + | chr5_3:17767390-17767409 | Msa0802920:intron | 45.0% |
| ! | GTGGTTGGCCATGATAAAGT+GGG | + | chr5_3:17767391-17767410 | Msa0802920:intron | 45.0% |
| GGTCACAACCCACTTTATCA+TGG | - | chr5_3:17767402-17767421 | None:intergenic | 45.0% | |
| !! | TAAAGTGGGTTGTGACCTGA+AGG | + | chr5_3:17767405-17767424 | Msa0802920:intron | 45.0% |
| !! | AAAGTGGGTTGTGACCTGAA+GGG | + | chr5_3:17767406-17767425 | Msa0802920:intron | 45.0% |
| AACTCACAAACAGACCCTTC+AGG | - | chr5_3:17767423-17767442 | None:intergenic | 45.0% | |
| TGAAGGGTCTGTTTGTGAGT+TGG | + | chr5_3:17767422-17767441 | Msa0802920:intron | 45.0% | |
| AATCCTAGACTTGCAACCCT+CGG | + | chr5_3:17767528-17767547 | Msa0802920:intron | 45.0% | |
| TAAGATAAACCTCGGGGTCA+AGG | - | chr5_3:17767556-17767575 | None:intergenic | 45.0% | |
| AGTGCTCTGCTAGTCATGTA+AGG | + | chr5_3:17767913-17767932 | Msa0802920:intron | 45.0% | |
| GTGCTCTGCTAGTCATGTAA+GGG | + | chr5_3:17767914-17767933 | Msa0802920:intron | 45.0% | |
| ! | TTGTCACAGACTGAAGCATC+AGG | + | chr5_3:17768023-17768042 | Msa0802920:CDS | 45.0% |
| AGATGAAGATTCAGCAAGGG+AGG | + | chr5_3:17768547-17768566 | Msa0802920:intron | 45.0% | |
| ! | GCCACACTTTTAGCATAAGC+AGG | - | chr5_3:17768650-17768669 | None:intergenic | 45.0% |
| GGAGTCTACTGTGACATCAA+GGG | - | chr5_3:17768755-17768774 | None:intergenic | 45.0% | |
| TGGAGTCTACTGTGACATCA+AGG | - | chr5_3:17768756-17768775 | None:intergenic | 45.0% | |
| GTTCAACTCTGTCATCATGC+AGG | + | chr5_3:17769233-17769252 | Msa0802920:intron | 45.0% | |
| AAACATCAAACCCCCTGGTT+GGG | + | chr5_3:17769301-17769320 | Msa0802920:CDS | 45.0% | |
| GTTTCACCACCTTCACTTGA+TGG | - | chr5_3:17769329-17769348 | None:intergenic | 45.0% | |
| AGTGAAGGTGGTGAAACTCT+TGG | + | chr5_3:17769332-17769351 | Msa0802920:CDS | 45.0% | |
| AAACTATCCACCCCTTTGTC+TGG | + | chr5_3:17769592-17769611 | Msa0802920:three_prime_UTR | 45.0% | |
| AAACTTACCAGACAAAGGGG+TGG | - | chr5_3:17769602-17769621 | None:intergenic | 45.0% | |
| !! | TTTCTGGTTGTGGGATTTGG+AGG | - | chr5_3:17765729-17765748 | None:intergenic | 45.0% |
| AGCATTTGCAGGGAGAAAGA+GGG | - | chr5_3:17765842-17765861 | None:intergenic | 45.0% | |
| ! | GTAAGTTGTGGTGGAAACAG+GGG | - | chr5_3:17765874-17765893 | None:intergenic | 45.0% |
| ! | CGTAAGTTGTGGTGGAAACA+GGG | - | chr5_3:17765875-17765894 | None:intergenic | 45.0% |
| ! | TCGTAAGTTGTGGTGGAAAC+AGG | - | chr5_3:17765876-17765895 | None:intergenic | 45.0% |
| TGTTTCCACCACAACTTACG+AGG | + | chr5_3:17765875-17765894 | Msa0802920:CDS | 45.0% | |
| AAGTACCTCGTAAGTTGTGG+TGG | - | chr5_3:17765883-17765902 | None:intergenic | 45.0% | |
| AAGGCGAAAAGCCCACAATA+CGG | - | chr5_3:17766416-17766435 | None:intergenic | 45.0% | |
| !! | TGAATGGTTCTGATTTGGGC+AGG | + | chr5_3:17766442-17766461 | Msa0802920:intron | 45.0% |
| ATGTCAGGCCATTTCAACTC+AGG | - | chr5_3:17766513-17766532 | None:intergenic | 45.0% | |
| GTTGAAATGGCCTGACATCA+TGG | + | chr5_3:17766515-17766534 | Msa0802920:CDS | 45.0% | |
| GCCTGACATCATGGAATCAT+GGG | + | chr5_3:17766524-17766543 | Msa0802920:CDS | 45.0% | |
| TCCCATGATTCCATGATGTC+AGG | - | chr5_3:17766528-17766547 | None:intergenic | 45.0% | |
| ! | CAAGCTCTTCAGCCACTTTA+TGG | - | chr5_3:17766626-17766645 | None:intergenic | 45.0% |
| AAGGAATAGCCCAAGACATC+CGG | - | chr5_3:17766927-17766946 | None:intergenic | 45.0% | |
| GCACTCACACAATTCATCCT+AGG | - | chr5_3:17767058-17767077 | None:intergenic | 45.0% | |
| TGCCCATTATCAGTGTCACA+TGG | + | chr5_3:17767186-17767205 | Msa0802920:intron | 45.0% | |
| CACACATAACGGCTACAGAA+AGG | - | chr5_3:17767234-17767253 | None:intergenic | 45.0% | |
| AGAGGAGGAAAAAACCAGAC+TGG | - | chr5_3:17767295-17767314 | None:intergenic | 45.0% | |
| AATTGCATCAAGGACAGAGG+AGG | - | chr5_3:17767310-17767329 | None:intergenic | 45.0% | |
| AATCATTTCAGACCCCATCC+CGG | + | chr5_3:17767358-17767377 | Msa0802920:intron | 45.0% | |
| ! | AGTGGTTGGCCATGATAAAG+TGG | + | chr5_3:17767390-17767409 | Msa0802920:intron | 45.0% |
| ! | GTGGTTGGCCATGATAAAGT+GGG | + | chr5_3:17767391-17767410 | Msa0802920:intron | 45.0% |
| GGTCACAACCCACTTTATCA+TGG | - | chr5_3:17767402-17767421 | None:intergenic | 45.0% | |
| !! | TAAAGTGGGTTGTGACCTGA+AGG | + | chr5_3:17767405-17767424 | Msa0802920:intron | 45.0% |
| !! | AAAGTGGGTTGTGACCTGAA+GGG | + | chr5_3:17767406-17767425 | Msa0802920:intron | 45.0% |
| AACTCACAAACAGACCCTTC+AGG | - | chr5_3:17767423-17767442 | None:intergenic | 45.0% | |
| TGAAGGGTCTGTTTGTGAGT+TGG | + | chr5_3:17767422-17767441 | Msa0802920:intron | 45.0% | |
| AATCCTAGACTTGCAACCCT+CGG | + | chr5_3:17767528-17767547 | Msa0802920:intron | 45.0% | |
| TAAGATAAACCTCGGGGTCA+AGG | - | chr5_3:17767556-17767575 | None:intergenic | 45.0% | |
| AGTGCTCTGCTAGTCATGTA+AGG | + | chr5_3:17767913-17767932 | Msa0802920:intron | 45.0% | |
| GTGCTCTGCTAGTCATGTAA+GGG | + | chr5_3:17767914-17767933 | Msa0802920:intron | 45.0% | |
| ! | TTGTCACAGACTGAAGCATC+AGG | + | chr5_3:17768023-17768042 | Msa0802920:CDS | 45.0% |
| AGATGAAGATTCAGCAAGGG+AGG | + | chr5_3:17768547-17768566 | Msa0802920:intron | 45.0% | |
| ! | GCCACACTTTTAGCATAAGC+AGG | - | chr5_3:17768650-17768669 | None:intergenic | 45.0% |
| GGAGTCTACTGTGACATCAA+GGG | - | chr5_3:17768755-17768774 | None:intergenic | 45.0% | |
| TGGAGTCTACTGTGACATCA+AGG | - | chr5_3:17768756-17768775 | None:intergenic | 45.0% | |
| GTTCAACTCTGTCATCATGC+AGG | + | chr5_3:17769233-17769252 | Msa0802920:intron | 45.0% | |
| AAACATCAAACCCCCTGGTT+GGG | + | chr5_3:17769301-17769320 | Msa0802920:CDS | 45.0% | |
| GTTTCACCACCTTCACTTGA+TGG | - | chr5_3:17769329-17769348 | None:intergenic | 45.0% | |
| AGTGAAGGTGGTGAAACTCT+TGG | + | chr5_3:17769332-17769351 | Msa0802920:CDS | 45.0% | |
| AAACTATCCACCCCTTTGTC+TGG | + | chr5_3:17769592-17769611 | Msa0802920:three_prime_UTR | 45.0% | |
| AAACTTACCAGACAAAGGGG+TGG | - | chr5_3:17769602-17769621 | None:intergenic | 45.0% | |
| AGGAAGAAACCTGAGAGCAG+CGG | - | chr5_3:17765709-17765728 | None:intergenic | 50.0% | |
| GAGCATTTGCAGGGAGAAAG+AGG | - | chr5_3:17765843-17765862 | None:intergenic | 50.0% | |
| !! | GCAGTGAAGGAGCATTTGCA+GGG | - | chr5_3:17765852-17765871 | None:intergenic | 50.0% |
| ! | TTGTGGGCTTTTCGCCTTTG+TGG | + | chr5_3:17766418-17766437 | Msa0802920:intron | 50.0% |
| GGCCTGACATCATGGAATCA+TGG | + | chr5_3:17766523-17766542 | Msa0802920:CDS | 50.0% | |
| ! | TCATGGGAATCACTTGCTGC+TGG | + | chr5_3:17766540-17766559 | Msa0802920:CDS | 50.0% |
| !! | TGAAGAGCTTGCTACTGGTC+TGG | + | chr5_3:17766635-17766654 | Msa0802920:CDS | 50.0% |
| !! | GAAGAGCTTGCTACTGGTCT+GGG | + | chr5_3:17766636-17766655 | Msa0802920:CDS | 50.0% |
| !! | AAGAGCTTGCTACTGGTCTG+GGG | + | chr5_3:17766637-17766656 | Msa0802920:CDS | 50.0% |
| TGGGCTATTCCTTCCACCAT+AGG | + | chr5_3:17766934-17766953 | Msa0802920:intron | 50.0% | |
| GGGCTATTCCTTCCACCATA+GGG | + | chr5_3:17766935-17766954 | Msa0802920:intron | 50.0% | |
| TGAAGAACCTTGCAGCCCTA+TGG | - | chr5_3:17766953-17766972 | None:intergenic | 50.0% | |
| !!! | ACTTTTGGGTTTCCGGGATG+GGG | - | chr5_3:17767373-17767392 | None:intergenic | 50.0% |
| !!! | CACTTTTGGGTTTCCGGGAT+GGG | - | chr5_3:17767374-17767393 | None:intergenic | 50.0% |
| !!! | CCAACCACTTTTGGGTTTCC+GGG | - | chr5_3:17767379-17767398 | None:intergenic | 50.0% |
| !!! | GCCAACCACTTTTGGGTTTC+CGG | - | chr5_3:17767380-17767399 | None:intergenic | 50.0% |
| !! | ATTCTAGGGCTGCTTGCTGA+AGG | + | chr5_3:17767759-17767778 | Msa0802920:intron | 50.0% |
| AAGTACAGTGCCTTCGCCTT+CGG | - | chr5_3:17767799-17767818 | None:intergenic | 50.0% | |
| AGGGCAGCAGTTGCAACATT+AGG | + | chr5_3:17767933-17767952 | Msa0802920:CDS | 50.0% | |
| GCAGCAGTTGCAACATTAGG+AGG | + | chr5_3:17767936-17767955 | Msa0802920:CDS | 50.0% | |
| GTGTGTTGGATGGGGAATTC+AGG | + | chr5_3:17768191-17768210 | Msa0802920:intron | 50.0% | |
| TGTTGGATGGGGAATTCAGG+AGG | + | chr5_3:17768194-17768213 | Msa0802920:intron | 50.0% | |
| AATTCAGGAGGCGAAGAGTG+TGG | + | chr5_3:17768206-17768225 | Msa0802920:intron | 50.0% | |
| GATTGGGATGTCGTGGTGAT+TGG | + | chr5_3:17769276-17769295 | Msa0802920:CDS | 50.0% | |
| CAACCAGGGGGTTTGATGTT+TGG | - | chr5_3:17769302-17769321 | None:intergenic | 50.0% | |
| CAAACATCAAACCCCCTGGT+TGG | + | chr5_3:17769300-17769319 | Msa0802920:CDS | 50.0% | |
| ! | ACTTGATGGATCCCAACCAG+GGG | - | chr5_3:17769315-17769334 | None:intergenic | 50.0% |
| ! | CACTTGATGGATCCCAACCA+GGG | - | chr5_3:17769316-17769335 | None:intergenic | 50.0% |
| ! | TCACTTGATGGATCCCAACC+AGG | - | chr5_3:17769317-17769336 | None:intergenic | 50.0% |
| GGTTGGGATCCATCAAGTGA+AGG | + | chr5_3:17769317-17769336 | Msa0802920:CDS | 50.0% | |
| TGGGATCCATCAAGTGAAGG+TGG | + | chr5_3:17769320-17769339 | Msa0802920:CDS | 50.0% | |
| TCAGCAACAGCTGGAGTTCT+TGG | + | chr5_3:17769408-17769427 | Msa0802920:three_prime_UTR | 50.0% | |
| CTCAGGATCGTCACATCCAA+TGG | - | chr5_3:17769678-17769697 | None:intergenic | 50.0% | |
| AGGAAGAAACCTGAGAGCAG+CGG | - | chr5_3:17765709-17765728 | None:intergenic | 50.0% | |
| GAGCATTTGCAGGGAGAAAG+AGG | - | chr5_3:17765843-17765862 | None:intergenic | 50.0% | |
| !! | GCAGTGAAGGAGCATTTGCA+GGG | - | chr5_3:17765852-17765871 | None:intergenic | 50.0% |
| ! | TTGTGGGCTTTTCGCCTTTG+TGG | + | chr5_3:17766418-17766437 | Msa0802920:intron | 50.0% |
| GGCCTGACATCATGGAATCA+TGG | + | chr5_3:17766523-17766542 | Msa0802920:CDS | 50.0% | |
| ! | TCATGGGAATCACTTGCTGC+TGG | + | chr5_3:17766540-17766559 | Msa0802920:CDS | 50.0% |
| !! | TGAAGAGCTTGCTACTGGTC+TGG | + | chr5_3:17766635-17766654 | Msa0802920:CDS | 50.0% |
| !! | GAAGAGCTTGCTACTGGTCT+GGG | + | chr5_3:17766636-17766655 | Msa0802920:CDS | 50.0% |
| !! | AAGAGCTTGCTACTGGTCTG+GGG | + | chr5_3:17766637-17766656 | Msa0802920:CDS | 50.0% |
| TGGGCTATTCCTTCCACCAT+AGG | + | chr5_3:17766934-17766953 | Msa0802920:intron | 50.0% | |
| GGGCTATTCCTTCCACCATA+GGG | + | chr5_3:17766935-17766954 | Msa0802920:intron | 50.0% | |
| TGAAGAACCTTGCAGCCCTA+TGG | - | chr5_3:17766953-17766972 | None:intergenic | 50.0% | |
| !!! | ACTTTTGGGTTTCCGGGATG+GGG | - | chr5_3:17767373-17767392 | None:intergenic | 50.0% |
| !!! | CACTTTTGGGTTTCCGGGAT+GGG | - | chr5_3:17767374-17767393 | None:intergenic | 50.0% |
| !!! | CCAACCACTTTTGGGTTTCC+GGG | - | chr5_3:17767379-17767398 | None:intergenic | 50.0% |
| !!! | GCCAACCACTTTTGGGTTTC+CGG | - | chr5_3:17767380-17767399 | None:intergenic | 50.0% |
| !! | ATTCTAGGGCTGCTTGCTGA+AGG | + | chr5_3:17767759-17767778 | Msa0802920:intron | 50.0% |
| AAGTACAGTGCCTTCGCCTT+CGG | - | chr5_3:17767799-17767818 | None:intergenic | 50.0% | |
| AGGGCAGCAGTTGCAACATT+AGG | + | chr5_3:17767933-17767952 | Msa0802920:CDS | 50.0% | |
| GCAGCAGTTGCAACATTAGG+AGG | + | chr5_3:17767936-17767955 | Msa0802920:CDS | 50.0% | |
| GTGTGTTGGATGGGGAATTC+AGG | + | chr5_3:17768191-17768210 | Msa0802920:intron | 50.0% | |
| TGTTGGATGGGGAATTCAGG+AGG | + | chr5_3:17768194-17768213 | Msa0802920:intron | 50.0% | |
| AATTCAGGAGGCGAAGAGTG+TGG | + | chr5_3:17768206-17768225 | Msa0802920:intron | 50.0% | |
| GATTGGGATGTCGTGGTGAT+TGG | + | chr5_3:17769276-17769295 | Msa0802920:CDS | 50.0% | |
| CAACCAGGGGGTTTGATGTT+TGG | - | chr5_3:17769302-17769321 | None:intergenic | 50.0% | |
| CAAACATCAAACCCCCTGGT+TGG | + | chr5_3:17769300-17769319 | Msa0802920:CDS | 50.0% | |
| ! | ACTTGATGGATCCCAACCAG+GGG | - | chr5_3:17769315-17769334 | None:intergenic | 50.0% |
| ! | CACTTGATGGATCCCAACCA+GGG | - | chr5_3:17769316-17769335 | None:intergenic | 50.0% |
| ! | TCACTTGATGGATCCCAACC+AGG | - | chr5_3:17769317-17769336 | None:intergenic | 50.0% |
| GGTTGGGATCCATCAAGTGA+AGG | + | chr5_3:17769317-17769336 | Msa0802920:CDS | 50.0% | |
| TGGGATCCATCAAGTGAAGG+TGG | + | chr5_3:17769320-17769339 | Msa0802920:CDS | 50.0% | |
| TCAGCAACAGCTGGAGTTCT+TGG | + | chr5_3:17769408-17769427 | Msa0802920:three_prime_UTR | 50.0% | |
| CTCAGGATCGTCACATCCAA+TGG | - | chr5_3:17769678-17769697 | None:intergenic | 50.0% | |
| GGAAGAAACCTGAGAGCAGC+GGG | - | chr5_3:17765708-17765727 | None:intergenic | 55.0% | |
| !! | GGCAGTGAAGGAGCATTTGC+AGG | - | chr5_3:17765853-17765872 | None:intergenic | 55.0% |
| !! | GTGGCTGAAGAGCTTGCTAC+TGG | + | chr5_3:17766630-17766649 | Msa0802920:CDS | 55.0% |
| AGAACCTTGCAGCCCTATGG+TGG | - | chr5_3:17766950-17766969 | None:intergenic | 55.0% | |
| !!! | CCACTTTTGGGTTTCCGGGA+TGG | - | chr5_3:17767375-17767394 | None:intergenic | 55.0% |
| CCATCCCGGAAACCCAAAAG+TGG | + | chr5_3:17767372-17767391 | Msa0802920:intron | 55.0% | |
| CCCGGAAACCCAAAAGTGGT+TGG | + | chr5_3:17767376-17767395 | Msa0802920:intron | 55.0% | |
| GTTCCGAGGGTTGCAAGTCT+AGG | - | chr5_3:17767534-17767553 | None:intergenic | 55.0% | |
| ! | GGTTCTGACTCAGTAGCCGA+AGG | + | chr5_3:17767780-17767799 | Msa0802920:CDS | 55.0% |
| !! | GGAGGTAAACATGGTGCTGC+TGG | + | chr5_3:17767954-17767973 | Msa0802920:CDS | 55.0% |
| TTCAAAACGGTGTGGGTGGG+TGG | + | chr5_3:17768263-17768282 | Msa0802920:intron | 55.0% | |
| TCAAAACGGTGTGGGTGGGT+GGG | + | chr5_3:17768264-17768283 | Msa0802920:intron | 55.0% | |
| TGGCCAAACATCAAACCCCC+TGG | + | chr5_3:17769296-17769315 | Msa0802920:CDS | 55.0% | |
| ! | CTTGATGGATCCCAACCAGG+GGG | - | chr5_3:17769314-17769333 | None:intergenic | 55.0% |
| GGAAGAAACCTGAGAGCAGC+GGG | - | chr5_3:17765708-17765727 | None:intergenic | 55.0% | |
| !! | GGCAGTGAAGGAGCATTTGC+AGG | - | chr5_3:17765853-17765872 | None:intergenic | 55.0% |
| !! | GTGGCTGAAGAGCTTGCTAC+TGG | + | chr5_3:17766630-17766649 | Msa0802920:CDS | 55.0% |
| AGAACCTTGCAGCCCTATGG+TGG | - | chr5_3:17766950-17766969 | None:intergenic | 55.0% | |
| !!! | CCACTTTTGGGTTTCCGGGA+TGG | - | chr5_3:17767375-17767394 | None:intergenic | 55.0% |
| CCATCCCGGAAACCCAAAAG+TGG | + | chr5_3:17767372-17767391 | Msa0802920:intron | 55.0% | |
| CCCGGAAACCCAAAAGTGGT+TGG | + | chr5_3:17767376-17767395 | Msa0802920:intron | 55.0% | |
| GTTCCGAGGGTTGCAAGTCT+AGG | - | chr5_3:17767534-17767553 | None:intergenic | 55.0% | |
| ! | GGTTCTGACTCAGTAGCCGA+AGG | + | chr5_3:17767780-17767799 | Msa0802920:CDS | 55.0% |
| !! | GGAGGTAAACATGGTGCTGC+TGG | + | chr5_3:17767954-17767973 | Msa0802920:CDS | 55.0% |
| TTCAAAACGGTGTGGGTGGG+TGG | + | chr5_3:17768263-17768282 | Msa0802920:intron | 55.0% | |
| TCAAAACGGTGTGGGTGGGT+GGG | + | chr5_3:17768264-17768283 | Msa0802920:intron | 55.0% | |
| TGGCCAAACATCAAACCCCC+TGG | + | chr5_3:17769296-17769315 | Msa0802920:CDS | 55.0% | |
| ! | CTTGATGGATCCCAACCAGG+GGG | - | chr5_3:17769314-17769333 | None:intergenic | 55.0% |
| AAACCTGAGAGCAGCGGGAC+TGG | - | chr5_3:17765703-17765722 | None:intergenic | 60.0% | |
| GGTGGAAACAGGGGCAGTGA+AGG | - | chr5_3:17765865-17765884 | None:intergenic | 60.0% | |
| ! | CCTTGCAGCCCTATGGTGGA+AGG | - | chr5_3:17766946-17766965 | None:intergenic | 60.0% |
| CCTTCCACCATAGGGCTGCA+AGG | + | chr5_3:17766943-17766962 | Msa0802920:intron | 60.0% | |
| GACTCAGTAGCCGAAGGCGA+AGG | + | chr5_3:17767786-17767805 | Msa0802920:CDS | 60.0% | |
| CAAAACGGTGTGGGTGGGTG+GGG | + | chr5_3:17768265-17768284 | Msa0802920:intron | 60.0% | |
| AAAACGGTGTGGGTGGGTGG+GGG | + | chr5_3:17768266-17768285 | Msa0802920:intron | 60.0% | |
| AAACCTGAGAGCAGCGGGAC+TGG | - | chr5_3:17765703-17765722 | None:intergenic | 60.0% | |
| GGTGGAAACAGGGGCAGTGA+AGG | - | chr5_3:17765865-17765884 | None:intergenic | 60.0% | |
| ! | CCTTGCAGCCCTATGGTGGA+AGG | - | chr5_3:17766946-17766965 | None:intergenic | 60.0% |
| CCTTCCACCATAGGGCTGCA+AGG | + | chr5_3:17766943-17766962 | Msa0802920:intron | 60.0% | |
| GACTCAGTAGCCGAAGGCGA+AGG | + | chr5_3:17767786-17767805 | Msa0802920:CDS | 60.0% | |
| CAAAACGGTGTGGGTGGGTG+GGG | + | chr5_3:17768265-17768284 | Msa0802920:intron | 60.0% | |
| AAAACGGTGTGGGTGGGTGG+GGG | + | chr5_3:17768266-17768285 | Msa0802920:intron | 60.0% | |
| CCTCGGGGTCAAGGTTCCGA+GGG | - | chr5_3:17767547-17767566 | None:intergenic | 65.0% | |
| ACCTCGGGGTCAAGGTTCCG+AGG | - | chr5_3:17767548-17767567 | None:intergenic | 65.0% | |
| CCTCGGGGTCAAGGTTCCGA+GGG | - | chr5_3:17767547-17767566 | None:intergenic | 65.0% | |
| ACCTCGGGGTCAAGGTTCCG+AGG | - | chr5_3:17767548-17767567 | None:intergenic | 65.0% | |
| CCTGAGAGCAGCGGGACTGG+TGG | - | chr5_3:17765700-17765719 | None:intergenic | 70.0% | |
| CCACCAGTCCCGCTGCTCTC+AGG | + | chr5_3:17765697-17765716 | Msa0802920:CDS | 70.0% | |
| CCCTCGGAACCTTGACCCCG+AGG | + | chr5_3:17767544-17767563 | Msa0802920:intron | 70.0% | |
| CCTGAGAGCAGCGGGACTGG+TGG | - | chr5_3:17765700-17765719 | None:intergenic | 70.0% | |
| CCACCAGTCCCGCTGCTCTC+AGG | + | chr5_3:17765697-17765716 | Msa0802920:CDS | 70.0% | |
| CCCTCGGAACCTTGACCCCG+AGG | + | chr5_3:17767544-17767563 | Msa0802920:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 17765613 | 17769721 | 17765613 | ID=Msa0802920;Name=Msa0802920 |
| chr5_3 | mRNA | 17765613 | 17769721 | 17765613 | ID=Msa0802920-mRNA-1;Parent=Msa0802920;Name=Msa0802920-mRNA-1;_AED=0.29;_eAED=0.29;_QI=35|1|1|1|1|1|8|357|389 |
| chr5_3 | exon | 17765613 | 17765896 | 17765613 | ID=Msa0802920-mRNA-1:exon:7319;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17766181 | 17766371 | 17766181 | ID=Msa0802920-mRNA-1:exon:7320;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17766464 | 17766658 | 17766464 | ID=Msa0802920-mRNA-1:exon:7321;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17766830 | 17766891 | 17766830 | ID=Msa0802920-mRNA-1:exon:7322;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17767766 | 17767832 | 17767766 | ID=Msa0802920-mRNA-1:exon:7323;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17767926 | 17768044 | 17767926 | ID=Msa0802920-mRNA-1:exon:7324;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17768549 | 17768725 | 17768549 | ID=Msa0802920-mRNA-1:exon:7325;Parent=Msa0802920-mRNA-1 |
| chr5_3 | exon | 17769255 | 17769721 | 17769255 | ID=Msa0802920-mRNA-1:exon:7326;Parent=Msa0802920-mRNA-1 |
| chr5_3 | five_prime_UTR | 17765613 | 17765647 | 17765613 | ID=Msa0802920-mRNA-1:five_prime_utr;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17765648 | 17765896 | 17765648 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17766181 | 17766371 | 17766181 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17766464 | 17766658 | 17766464 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17766830 | 17766891 | 17766830 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17767766 | 17767832 | 17767766 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17767926 | 17768044 | 17767926 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17768549 | 17768725 | 17768549 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | CDS | 17769255 | 17769364 | 17769255 | ID=Msa0802920-mRNA-1:cds;Parent=Msa0802920-mRNA-1 |
| chr5_3 | three_prime_UTR | 17769365 | 17769721 | 17769365 | ID=Msa0802920-mRNA-1:three_prime_utr;Parent=Msa0802920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
