Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119860 | XP_003624498.1 | 96.528 | 144 | 5 | 0 | 1 | 144 | 1 | 144 | 3.40e-98 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119860 | sp|Q96500|LIRP1_ARATH | 48.611 | 144 | 65 | 4 | 1 | 141 | 1 | 138 | 9.97e-32 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119860 | B7FGR7 | 96.528 | 144 | 5 | 0 | 1 | 144 | 1 | 144 | 1.62e-98 | 288 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043680 | Msa1119860 | 0.827041 | 1.946867e-54 | -8.615850e-47 |
| Msa0043940 | Msa1119860 | 0.855924 | 4.550555e-62 | -8.615850e-47 |
| Msa0064550 | Msa1119860 | 0.809120 | 2.213459e-50 | -8.615850e-47 |
| Msa0076720 | Msa1119860 | 0.810725 | 9.990711e-51 | -8.615850e-47 |
| Msa0079770 | Msa1119860 | 0.804902 | 1.728386e-49 | -8.615850e-47 |
| Msa0084630 | Msa1119860 | 0.843837 | 1.095778e-58 | -8.615850e-47 |
| Msa0084680 | Msa1119860 | 0.803428 | 3.502780e-49 | -8.615850e-47 |
| Msa0089510 | Msa1119860 | 0.823428 | 1.392559e-53 | -8.615850e-47 |
| Msa0089520 | Msa1119860 | 0.824699 | 7.006203e-54 | -8.615850e-47 |
| Msa0092660 | Msa1119860 | 0.838608 | 2.599192e-57 | -8.615850e-47 |
| Msa0092680 | Msa1119860 | 0.835261 | 1.859509e-56 | -8.615850e-47 |
| Msa0092710 | Msa1119860 | 0.851312 | 9.635644e-61 | -8.615850e-47 |
| Msa0092730 | Msa1119860 | 0.842509 | 2.476111e-58 | -8.615850e-47 |
| Msa0103160 | Msa1119860 | 0.808110 | 3.638238e-50 | -8.615850e-47 |
| Msa0109490 | Msa1119860 | 0.804496 | 2.100505e-49 | -8.615850e-47 |
| Msa0604700 | Msa1119860 | 0.808863 | 2.512787e-50 | -8.615850e-47 |
| Msa0604880 | Msa1119860 | 0.825769 | 3.912288e-54 | -8.615850e-47 |
| Msa0609790 | Msa1119860 | 0.865780 | 4.607285e-65 | -8.615850e-47 |
| Msa0627050 | Msa1119860 | 0.843835 | 1.097044e-58 | -8.615850e-47 |
| Msa0629500 | Msa1119860 | 0.816214 | 6.205667e-52 | -8.615850e-47 |
| Msa0636720 | Msa1119860 | 0.860992 | 1.402348e-63 | -8.615850e-47 |
| Msa0644630 | Msa1119860 | 0.812670 | 3.771853e-51 | -8.615850e-47 |
| Msa0645820 | Msa1119860 | 0.812473 | 4.165051e-51 | -8.615850e-47 |
| Msa0646190 | Msa1119860 | 0.852188 | 5.437101e-61 | -8.615850e-47 |
| Msa0649310 | Msa1119860 | 0.800979 | 1.117721e-48 | -8.615850e-47 |
| Msa0649380 | Msa1119860 | 0.805347 | 1.395061e-49 | -8.615850e-47 |
| Msa0649420 | Msa1119860 | 0.807022 | 6.192253e-50 | -8.615850e-47 |
| Msa0667970 | Msa1119860 | 0.848390 | 6.320146e-60 | -8.615850e-47 |
| Msa0681210 | Msa1119860 | 0.805287 | 1.436105e-49 | -8.615850e-47 |
| Msa0692420 | Msa1119860 | 0.801130 | 1.041101e-48 | -8.615850e-47 |
| Msa0698600 | Msa1119860 | 0.810148 | 1.330934e-50 | -8.615850e-47 |
| Msa0703760 | Msa1119860 | 0.806172 | 9.359447e-50 | -8.615850e-47 |
| Msa0704220 | Msa1119860 | 0.855488 | 6.101972e-62 | -8.615850e-47 |
| Msa0720270 | Msa1119860 | 0.808170 | 3.532683e-50 | -8.615850e-47 |
| Msa0729550 | Msa1119860 | 0.833156 | 6.271063e-56 | -8.615850e-47 |
| Msa0738870 | Msa1119860 | 0.828028 | 1.128863e-54 | -8.615850e-47 |
| Msa0738880 | Msa1119860 | 0.878859 | 1.996454e-69 | -8.615850e-47 |
| Msa0742160 | Msa1119860 | 0.814338 | 1.621014e-51 | -8.615850e-47 |
| Msa0760890 | Msa1119860 | 0.811781 | 5.896165e-51 | -8.615850e-47 |
| Msa0769830 | Msa1119860 | 0.862954 | 3.513695e-64 | -8.615850e-47 |
| Msa0780140 | Msa1119860 | 0.806521 | 7.899880e-50 | -8.615850e-47 |
| Msa0783270 | Msa1119860 | 0.800525 | 1.383333e-48 | -8.615850e-47 |
| Msa0783280 | Msa1119860 | 0.812769 | 3.589350e-51 | -8.615850e-47 |
| Msa0793090 | Msa1119860 | 0.824465 | 7.954258e-54 | -8.615850e-47 |
| Msa0795850 | Msa1119860 | 0.801033 | 1.089919e-48 | -8.615850e-47 |
| Msa0802210 | Msa1119860 | 0.812569 | 3.968772e-51 | -8.615850e-47 |
| Msa0806720 | Msa1119860 | 0.882799 | 7.694363e-71 | -8.615850e-47 |
| Msa0806760 | Msa1119860 | 0.883860 | 3.137413e-71 | -8.615850e-47 |
| Msa0809300 | Msa1119860 | 0.821890 | 3.174671e-53 | -8.615850e-47 |
| Msa0810370 | Msa1119860 | 0.819637 | 1.046339e-52 | -8.615850e-47 |
| Msa0819320 | Msa1119860 | 0.881138 | 3.079164e-70 | -8.615850e-47 |
| Msa0819330 | Msa1119860 | 0.836473 | 9.167042e-57 | -8.615850e-47 |
| Msa0819370 | Msa1119860 | 0.879044 | 1.718172e-69 | -8.615850e-47 |
| Msa0838660 | Msa1119860 | 0.812381 | 4.363324e-51 | -8.615850e-47 |
| Msa0124660 | Msa1119860 | 0.819026 | 1.441719e-52 | -8.615850e-47 |
| Msa0130760 | Msa1119860 | 0.809684 | 1.675528e-50 | -8.615850e-47 |
| Msa0137600 | Msa1119860 | 0.841766 | 3.894228e-58 | -8.615850e-47 |
| Msa0140290 | Msa1119860 | 0.807437 | 5.057356e-50 | -8.615850e-47 |
| Msa0150210 | Msa1119860 | 0.824167 | 9.346734e-54 | -8.615850e-47 |
| Msa0154240 | Msa1119860 | 0.808639 | 2.805946e-50 | -8.615850e-47 |
| Msa0154270 | Msa1119860 | 0.815719 | 8.002150e-52 | -8.615850e-47 |
| Msa0171920 | Msa1119860 | 0.840180 | 1.015239e-57 | -8.615850e-47 |
| Msa0178940 | Msa1119860 | 0.840890 | 6.620065e-58 | -8.615850e-47 |
| Msa0182640 | Msa1119860 | 0.836011 | 1.201205e-56 | -8.615850e-47 |
| Msa0197030 | Msa1119860 | 0.808983 | 2.368676e-50 | -8.615850e-47 |
| Msa0199740 | Msa1119860 | 0.807288 | 5.439784e-50 | -8.615850e-47 |
| Msa0206940 | Msa1119860 | 0.810282 | 1.245788e-50 | -8.615850e-47 |
| Msa0216210 | Msa1119860 | 0.813982 | 1.942268e-51 | -8.615850e-47 |
| Msa0218530 | Msa1119860 | -0.808327 | 3.269949e-50 | -8.615850e-47 |
| Msa0218650 | Msa1119860 | -0.827865 | 1.235697e-54 | -8.615850e-47 |
| Msa0367370 | Msa1119860 | 0.823839 | 1.115844e-53 | -8.615850e-47 |
| Msa0368430 | Msa1119860 | 0.820240 | 7.613351e-53 | -8.615850e-47 |
| Msa0380650 | Msa1119860 | 0.822623 | 2.145604e-53 | -8.615850e-47 |
| Msa0382500 | Msa1119860 | 0.811702 | 6.135042e-51 | -8.615850e-47 |
| Msa0382590 | Msa1119860 | 0.850939 | 1.227531e-60 | -8.615850e-47 |
| Msa0387790 | Msa1119860 | 0.806920 | 6.507606e-50 | -8.615850e-47 |
| Msa0387970 | Msa1119860 | 0.842921 | 1.923909e-58 | -8.615850e-47 |
| Msa0392050 | Msa1119860 | 0.854154 | 1.487259e-61 | -8.615850e-47 |
| Msa0392540 | Msa1119860 | 0.810370 | 1.192199e-50 | -8.615850e-47 |
| Msa0401340 | Msa1119860 | 0.822659 | 2.104917e-53 | -8.615850e-47 |
| Msa0415930 | Msa1119860 | 0.804533 | 2.064021e-49 | -8.615850e-47 |
| Msa0425810 | Msa1119860 | 0.815059 | 1.122202e-51 | -8.615850e-47 |
| Msa0430290 | Msa1119860 | 0.820823 | 5.595433e-53 | -8.615850e-47 |
| Msa0432680 | Msa1119860 | 0.807630 | 4.601400e-50 | -8.615850e-47 |
| Msa0432720 | Msa1119860 | 0.892671 | 1.280431e-74 | -8.615850e-47 |
| Msa0437780 | Msa1119860 | 0.835054 | 2.098133e-56 | -8.615850e-47 |
| Msa0440310 | Msa1119860 | 0.820416 | 6.939479e-53 | -8.615850e-47 |
| Msa0448120 | Msa1119860 | 0.803872 | 2.833428e-49 | -8.615850e-47 |
| Msa0469950 | Msa1119860 | 0.854241 | 1.402936e-61 | -8.615850e-47 |
| Msa0472270 | Msa1119860 | 0.862869 | 3.732125e-64 | -8.615850e-47 |
| Msa0472570 | Msa1119860 | 0.806701 | 7.240149e-50 | -8.615850e-47 |
| Msa0480150 | Msa1119860 | 0.830811 | 2.379131e-55 | -8.615850e-47 |
| Msa0481490 | Msa1119860 | 0.820505 | 6.621678e-53 | -8.615850e-47 |
| Msa0984000 | Msa1119860 | 0.834219 | 3.400529e-56 | -8.615850e-47 |
| Msa1027790 | Msa1119860 | 0.815329 | 9.777015e-52 | -8.615850e-47 |
| Msa1030870 | Msa1119860 | 0.926673 | 3.393045e-91 | -8.615850e-47 |
| Msa1034930 | Msa1119860 | 0.810603 | 1.061799e-50 | -8.615850e-47 |
| Msa1069960 | Msa1119860 | 0.987313 | 8.252783e-170 | -8.615850e-47 |
| Msa1079480 | Msa1119860 | 0.802688 | 4.982956e-49 | -8.615850e-47 |
| Msa1080620 | Msa1119860 | 0.857599 | 1.462490e-62 | -8.615850e-47 |
| Msa1080690 | Msa1119860 | 0.855219 | 7.306493e-62 | -8.615850e-47 |
| Msa1082150 | Msa1119860 | 0.810358 | 1.199133e-50 | -8.615850e-47 |
| Msa1083460 | Msa1119860 | 0.823117 | 1.646385e-53 | -8.615850e-47 |
| Msa1099690 | Msa1119860 | 0.806605 | 7.585067e-50 | -8.615850e-47 |
| Msa1106580 | Msa1119860 | 0.834993 | 2.173733e-56 | -8.615850e-47 |
| Msa0240640 | Msa1119860 | 0.814077 | 1.851413e-51 | -8.615850e-47 |
| Msa0242290 | Msa1119860 | 0.830390 | 3.017970e-55 | -8.615850e-47 |
| Msa0250520 | Msa1119860 | 0.801457 | 8.923289e-49 | -8.615850e-47 |
| Msa0260190 | Msa1119860 | 0.830990 | 2.151416e-55 | -8.615850e-47 |
| Msa0280140 | Msa1119860 | 0.832860 | 7.427551e-56 | -8.615850e-47 |
| Msa0295570 | Msa1119860 | 0.847559 | 1.071067e-59 | -8.615850e-47 |
| Msa0295730 | Msa1119860 | 0.805379 | 1.373607e-49 | -8.615850e-47 |
| Msa0296000 | Msa1119860 | 0.837617 | 4.676180e-57 | -8.615850e-47 |
| Msa0296610 | Msa1119860 | 0.801766 | 7.710682e-49 | -8.615850e-47 |
| Msa0297370 | Msa1119860 | -0.800834 | 1.196877e-48 | -8.615850e-47 |
| Msa0303440 | Msa1119860 | 0.804108 | 2.530691e-49 | -8.615850e-47 |
| Msa0308430 | Msa1119860 | 0.806869 | 6.671391e-50 | -8.615850e-47 |
| Msa0319970 | Msa1119860 | 0.800066 | 1.715741e-48 | -8.615850e-47 |
| Msa0323990 | Msa1119860 | 0.818913 | 1.529431e-52 | -8.615850e-47 |
| Msa0333900 | Msa1119860 | 0.825740 | 3.974387e-54 | -8.615850e-47 |
| Msa0334020 | Msa1119860 | 0.833057 | 6.635580e-56 | -8.615850e-47 |
| Msa0334280 | Msa1119860 | 0.803192 | 3.919606e-49 | -8.615850e-47 |
| Msa0334980 | Msa1119860 | 0.827239 | 1.745678e-54 | -8.615850e-47 |
| Msa0342620 | Msa1119860 | 0.808432 | 3.105989e-50 | -8.615850e-47 |
| Msa0344680 | Msa1119860 | 0.854941 | 8.797360e-62 | -8.615850e-47 |
| Msa0346790 | Msa1119860 | 0.837138 | 6.201933e-57 | -8.615850e-47 |
| Msa0354390 | Msa1119860 | 0.813618 | 2.337063e-51 | -8.615850e-47 |
| Msa0363940 | Msa1119860 | 0.807155 | 5.803900e-50 | -8.615850e-47 |
| Msa1112610 | Msa1119860 | 0.801898 | 7.244785e-49 | -8.615850e-47 |
| Msa1118460 | Msa1119860 | 0.840172 | 1.020510e-57 | -8.615850e-47 |
| Msa1118980 | Msa1119860 | 0.804488 | 2.109338e-49 | -8.615850e-47 |
| Msa1119860 | Msa1126310 | 0.833205 | 6.094404e-56 | -8.615850e-47 |
| Msa1119860 | Msa1131900 | 0.800002 | 1.768104e-48 | -8.615850e-47 |
| Msa1119860 | Msa1132820 | 0.800382 | 1.479538e-48 | -8.615850e-47 |
| Msa1119860 | Msa1136550 | 0.823435 | 1.387099e-53 | -8.615850e-47 |
| Msa1119860 | Msa1144730 | 0.854770 | 9.862087e-62 | -8.615850e-47 |
| Msa1119860 | Msa1144950 | 0.895136 | 1.276676e-75 | -8.615850e-47 |
| Msa1119860 | Msa1149960 | 0.806553 | 7.777065e-50 | -8.615850e-47 |
| Msa1119860 | Msa1157730 | 0.886275 | 3.939974e-72 | -8.615850e-47 |
| Msa1119860 | Msa1165290 | 0.802321 | 5.931586e-49 | -8.615850e-47 |
| Msa1119860 | Msa1167160 | 0.838520 | 2.738866e-57 | -8.615850e-47 |
| Msa1119860 | Msa1173380 | 0.825042 | 5.816229e-54 | -8.615850e-47 |
| Msa1119860 | Msa1197110 | 0.813900 | 2.025622e-51 | -8.615850e-47 |
| Msa1119860 | Msa1222580 | 0.807334 | 5.318936e-50 | -8.615850e-47 |
| Msa1119860 | Msa1238730 | 0.810429 | 1.157824e-50 | -8.615850e-47 |
| Msa1119860 | Msa1258940 | 0.803728 | 3.035000e-49 | -8.615850e-47 |
| Msa1119860 | Msa1264560 | 0.806591 | 7.636316e-50 | -8.615850e-47 |
| Msa1119860 | Msa1279700 | 0.822336 | 2.501662e-53 | -8.615850e-47 |
| Msa1119860 | Msa1281270 | 0.814249 | 1.695802e-51 | -8.615850e-47 |
| Msa1119860 | Msa1293050 | 0.847269 | 1.287142e-59 | -8.615850e-47 |
| Msa1119860 | Msa1305650 | 0.808508 | 2.993059e-50 | -8.615850e-47 |
| Msa1119860 | Msa1306200 | 0.809114 | 2.220023e-50 | -8.615850e-47 |
| Msa1119860 | Msa1317600 | 0.823753 | 1.168641e-53 | -8.615850e-47 |
| Msa1119860 | Msa1320380 | 0.826338 | 2.865357e-54 | -8.615850e-47 |
| Msa1119860 | Msa1354090 | 0.833368 | 5.550773e-56 | -8.615850e-47 |
| Msa1119860 | Msa1358340 | 0.817378 | 3.401705e-52 | -8.615850e-47 |
| Msa1119860 | Msa1359890 | 0.835271 | 1.848780e-56 | -8.615850e-47 |
| Msa1119860 | Msa1373380 | 0.840424 | 8.766686e-58 | -8.615850e-47 |
| Msa1119860 | Msa1394900 | 0.842996 | 1.838202e-58 | -8.615850e-47 |
| Msa1119860 | Msa1405770 | 0.822226 | 2.652446e-53 | -8.615850e-47 |
| Msa1119860 | Msa1406020 | 0.839685 | 1.366781e-57 | -8.615850e-47 |
| Msa1119860 | Msa1406880 | 0.808281 | 3.344818e-50 | -8.615850e-47 |
| Msa1119860 | Msa1411830 | 0.864793 | 9.417656e-65 | -8.615850e-47 |
| Msa1119860 | Msa1412520 | 0.839226 | 1.799037e-57 | -8.615850e-47 |
| Msa1119860 | Msa1418600 | 0.811369 | 7.245706e-51 | -8.615850e-47 |
| Msa1119860 | Msa1420520 | 0.800763 | 1.237077e-48 | -8.615850e-47 |
| Msa1119860 | Msa1423190 | 0.820048 | 8.427130e-53 | -8.615850e-47 |
| Msa1119860 | Msa1430760 | 0.815882 | 7.360408e-52 | -8.615850e-47 |
| Msa1119860 | Msa1434020 | 0.807248 | 5.544752e-50 | -8.615850e-47 |
| Msa1119860 | Msa1434660 | 0.836814 | 7.503072e-57 | -8.615850e-47 |
| Msa1119860 | Msa1437320 | 0.811185 | 7.945468e-51 | -8.615850e-47 |
| Msa1119860 | Msa1439120 | 0.862038 | 6.722868e-64 | -8.615850e-47 |
| Msa1119860 | Msa1440220 | 0.844658 | 6.594802e-59 | -8.615850e-47 |
| Msa1119860 | Msa1455660 | 0.861096 | 1.304229e-63 | -8.615850e-47 |
| Msa1119860 | Msa1459540 | 0.810881 | 9.246632e-51 | -8.615850e-47 |
| Msa1119860 | Msa1466350 | 0.807537 | 4.814997e-50 | -8.615850e-47 |
| Msa0485280 | Msa1119860 | 0.801825 | 7.500413e-49 | -8.615850e-47 |
| Msa0487490 | Msa1119860 | 0.814528 | 1.471612e-51 | -8.615850e-47 |
| Msa0512130 | Msa1119860 | 0.802019 | 6.842737e-49 | -8.615850e-47 |
| Msa0512310 | Msa1119860 | 0.814033 | 1.893302e-51 | -8.615850e-47 |
| Msa0525270 | Msa1119860 | 0.897069 | 2.010375e-76 | -8.615850e-47 |
| Msa0525280 | Msa1119860 | 0.896752 | 2.728021e-76 | -8.615850e-47 |
| Msa0530340 | Msa1119860 | 0.820599 | 6.298680e-53 | -8.615850e-47 |
| Msa0532840 | Msa1119860 | 0.810502 | 1.116560e-50 | -8.615850e-47 |
| Msa0533010 | Msa1119860 | 0.807247 | 5.549872e-50 | -8.615850e-47 |
| Msa0548210 | Msa1119860 | 0.827345 | 1.646889e-54 | -8.615850e-47 |
| Msa0549540 | Msa1119860 | 0.845346 | 4.300427e-59 | -8.615850e-47 |
| Msa0549760 | Msa1119860 | 0.812858 | 3.431587e-51 | -8.615850e-47 |
| Msa0561510 | Msa1119860 | 0.803494 | 3.393950e-49 | -8.615850e-47 |
| Msa0575670 | Msa1119860 | 0.802604 | 5.184979e-49 | -8.615850e-47 |
| Msa0587900 | Msa1119860 | 0.812688 | 3.738189e-51 | -8.615850e-47 |
| Msa0589290 | Msa1119860 | 0.820933 | 5.279897e-53 | -8.615850e-47 |
| Msa0848760 | Msa1119860 | 0.865134 | 7.358032e-65 | -8.615850e-47 |
| Msa0859520 | Msa1119860 | 0.801867 | 7.352674e-49 | -8.615850e-47 |
| Msa0862290 | Msa1119860 | 0.811105 | 8.269143e-51 | -8.615850e-47 |
| Msa0882700 | Msa1119860 | 0.873792 | 1.116955e-67 | -8.615850e-47 |
| Msa0929940 | Msa1119860 | 0.863745 | 1.999734e-64 | -8.615850e-47 |
| Msa0944690 | Msa1119860 | 0.851158 | 1.064967e-60 | -8.615850e-47 |
| Msa0945960 | Msa1119860 | 0.879264 | 1.436502e-69 | -8.615850e-47 |
| Msa0955260 | Msa1119860 | 0.802285 | 6.032953e-49 | -8.615850e-47 |
| Msa0968780 | Msa1119860 | 0.822256 | 2.611250e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119860 | MtrunA17_Chr7g0252111 | 96.528 | 144 | 5 | 0 | 1 | 144 | 1 | 144 | 3.13e-102 | 288 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119860 | AT3G26740.1 | 48.611 | 144 | 65 | 4 | 1 | 141 | 1 | 138 | 1.01e-32 | 113 |
Find 74 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTCTTTGGTGTTGTTAA+AGG | 0.206963 | 7_3:-69009359 | None:intergenic |
| TGAGATGAATTAATCTTCTA+AGG | 0.271083 | 7_3:-69009269 | None:intergenic |
| GGTGTATCATTCCTTGCTTC+AGG | 0.283991 | 7_3:-69011412 | None:intergenic |
| TCAGGCTGCAGCTTGACTTC+AGG | 0.292025 | 7_3:-69011394 | None:intergenic |
| ATTAATCTTCTAAGGAAGTT+TGG | 0.317438 | 7_3:-69009261 | None:intergenic |
| AGAACGTGAGGCAATCAATT+TGG | 0.330098 | 7_3:-69009414 | None:intergenic |
| ATCTATCTCCCAAGACAAAA+AGG | 0.330799 | 7_3:+69009164 | Msa1119860:five_prime_UTR |
| TTCCCTGAAGCTGCAGTCTT+TGG | 0.331736 | 7_3:-69011433 | None:intergenic |
| CAAGCCTCCACACCTATATA+AGG | 0.332061 | 7_3:-69012089 | None:intergenic |
| ACACCAAAGACTGCAGCTTC+AGG | 0.337411 | 7_3:+69011430 | Msa1119860:CDS |
| TTGGTTTCAATTTATAGAAT+AGG | 0.339929 | 7_3:-69009242 | None:intergenic |
| GATATTTAGTATTGAGGATA+AGG | 0.355902 | 7_3:-69009190 | None:intergenic |
| GGTTGGAGGGGATGCTTGTT+TGG | 0.357304 | 7_3:+69011360 | Msa1119860:CDS |
| ATAGCGAAATCTTACGTCTT+AGG | 0.366730 | 7_3:-69011487 | None:intergenic |
| TCAATTTATAGAATAGGAAT+AGG | 0.376737 | 7_3:-69009236 | None:intergenic |
| TGCTCATGGTGCGGCCGAGC+TGG | 0.391083 | 7_3:+69011933 | Msa1119860:three_prime_UTR |
| ATATTAAGAAGGGAATATAA+TGG | 0.392582 | 7_3:+69011856 | Msa1119860:three_prime_UTR |
| ATCTCATCCATTACAATGAT+AGG | 0.399298 | 7_3:+69009210 | Msa1119860:five_prime_UTR |
| CTGTGAGCCTGATTATCAAA+AGG | 0.404528 | 7_3:+69011647 | Msa1119860:CDS |
| GAAGATTAATTCATCTCAAA+AGG | 0.416071 | 7_3:+69009274 | Msa1119860:five_prime_UTR |
| TATTAAGAAGGGAATATAAT+GGG | 0.431529 | 7_3:+69011857 | Msa1119860:three_prime_UTR |
| CAAAGAAACTTATATTAAGA+AGG | 0.445828 | 7_3:+69011845 | Msa1119860:three_prime_UTR |
| ATGAGGAATCACCCTTATAT+AGG | 0.447838 | 7_3:+69012077 | Msa1119860:three_prime_UTR |
| ACCGTTTCACATGCCTCAGC+TGG | 0.450987 | 7_3:-69011340 | None:intergenic |
| TGGAGTGCTAACGCACTTGT+AGG | 0.459639 | 7_3:-69011982 | None:intergenic |
| GCAGAGGCTTGTGATGATCT+TGG | 0.462484 | 7_3:+69011615 | Msa1119860:CDS |
| GCAAGATGTGAAACACTCTT+TGG | 0.470394 | 7_3:-69009371 | None:intergenic |
| CACCAAAGACTGCAGCTTCA+GGG | 0.489453 | 7_3:+69011431 | Msa1119860:CDS |
| GGATGAGATATTTAGTATTG+AGG | 0.491448 | 7_3:-69009196 | None:intergenic |
| TCTTGGGAGATAGATTGTCC+TGG | 0.500035 | 7_3:-69009156 | None:intergenic |
| GATCATCACAAGCCTCTGCT+TGG | 0.508891 | 7_3:-69011611 | None:intergenic |
| TGTGAGCCTGATTATCAAAA+GGG | 0.510012 | 7_3:+69011648 | Msa1119860:CDS |
| TAGGACACCTATCATTGTAA+TGG | 0.518462 | 7_3:-69009217 | None:intergenic |
| TCACATTCTGACTTGAGCGT+TGG | 0.521901 | 7_3:-69012002 | None:intergenic |
| TGTTGAAGGATCAGAGTTGT+CGG | 0.523519 | 7_3:-69009471 | None:intergenic |
| AAGCCTCCACACCTATATAA+GGG | 0.525916 | 7_3:-69012088 | None:intergenic |
| CAATAGCCAAGGCAATAAGA+AGG | 0.530752 | 7_3:-69011695 | None:intergenic |
| CACAAAGGTAGTGGCTGCAA+AGG | 0.538246 | 7_3:-69009336 | None:intergenic |
| CAGCTTCAGGGAACATTGAG+AGG | 0.539207 | 7_3:+69011443 | Msa1119860:CDS |
| CGTGAGGCAATCAATTTGGT+AGG | 0.539328 | 7_3:-69009410 | None:intergenic |
| TGTTAAAGGCACAAAGGTAG+TGG | 0.548610 | 7_3:-69009345 | None:intergenic |
| TCCAGCTGAGGCATGTGAAA+CGG | 0.549406 | 7_3:+69011339 | Msa1119860:CDS |
| CGAGCTGGTGATTCCACGGT+GGG | 0.552818 | 7_3:+69011948 | Msa1119860:three_prime_UTR |
| AAAGAAACTTATATTAAGAA+GGG | 0.557838 | 7_3:+69011846 | Msa1119860:three_prime_UTR |
| GAATTGTAATCAACTGTTGA+AGG | 0.559497 | 7_3:-69009485 | None:intergenic |
| AGGCATGTGAAACGGTTGGA+GGG | 0.565003 | 7_3:+69011347 | Msa1119860:CDS |
| GCTGAGGCATGTGAAACGGT+TGG | 0.574341 | 7_3:+69011343 | Msa1119860:CDS |
| CGGCCGAGCTGGTGATTCCA+CGG | 0.575516 | 7_3:+69011944 | Msa1119860:three_prime_UTR |
| TGTCAGAGTGTTTCCAGCTG+AGG | 0.580476 | 7_3:+69011327 | Msa1119860:intron |
| CTCAAGTCAGAATGTGAATG+AGG | 0.587565 | 7_3:+69012008 | Msa1119860:three_prime_UTR |
| AAAAGCACAGGCAATACAGA+TGG | 0.589617 | 7_3:+69011909 | Msa1119860:three_prime_UTR |
| GAGGCATGTGAAACGGTTGG+AGG | 0.591598 | 7_3:+69011346 | Msa1119860:CDS |
| TCAAGCTGCAGCCTGAAGCA+AGG | 0.602199 | 7_3:+69011401 | Msa1119860:CDS |
| GAGGCTTGTGATGATCTTGG+AGG | 0.607345 | 7_3:+69011618 | Msa1119860:CDS |
| GGCATGTGAAACGGTTGGAG+GGG | 0.610004 | 7_3:+69011348 | Msa1119860:CDS |
| GTTGTAAGCTTCAATAGCCA+AGG | 0.612595 | 7_3:-69011706 | None:intergenic |
| ATCGTACCTCGAGGGTGATG+AGG | 0.621997 | 7_3:+69012060 | Msa1119860:three_prime_UTR |
| AATTATAAGAACAAAAGCAC+AGG | 0.624477 | 7_3:+69011897 | Msa1119860:three_prime_UTR |
| GAATCACCCTTATATAGGTG+TGG | 0.629924 | 7_3:+69012082 | Msa1119860:three_prime_UTR |
| GAAAGTGAATCGTACCTCGA+GGG | 0.634551 | 7_3:+69012052 | Msa1119860:three_prime_UTR |
| GTGAGGCAATCAATTTGGTA+GGG | 0.637953 | 7_3:-69009409 | None:intergenic |
| GCAATACAGATGGATGCTCA+TGG | 0.643896 | 7_3:+69011919 | Msa1119860:three_prime_UTR |
| TGGTGTTGTTAAAGGCACAA+AGG | 0.647032 | 7_3:-69009351 | None:intergenic |
| AGCTTCAGGGAACATTGAGA+GGG | 0.650830 | 7_3:+69011444 | Msa1119860:CDS |
| ACAGATGGATGCTCATGGTG+CGG | 0.651596 | 7_3:+69011924 | Msa1119860:three_prime_UTR |
| CCACCGTGGAATCACCAGCT+CGG | 0.654741 | 7_3:-69011947 | None:intergenic |
| TCACCCTTATATAGGTGTGG+AGG | 0.657583 | 7_3:+69012085 | Msa1119860:three_prime_UTR |
| AAGTCAGAATGTGAATGAGG+TGG | 0.672114 | 7_3:+69012011 | Msa1119860:three_prime_UTR |
| GCGAGGTGAAGAAGAACGTG+AGG | 0.676435 | 7_3:-69009426 | None:intergenic |
| TGAAAGTGAATCGTACCTCG+AGG | 0.680621 | 7_3:+69012051 | Msa1119860:three_prime_UTR |
| AGGTGGTTAAGCATAATGCA+AGG | 0.686256 | 7_3:+69012028 | Msa1119860:three_prime_UTR |
| ACTTTGATTGCAGTGTAGCG+AGG | 0.698323 | 7_3:-69009443 | None:intergenic |
| CCGAGCTGGTGATTCCACGG+TGG | 0.699711 | 7_3:+69011947 | Msa1119860:three_prime_UTR |
| GTGATTCCTCATCACCCTCG+AGG | 0.702861 | 7_3:-69012066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATATTTTTCTATTTG+AGG | + | chr7_3:69010450-69010469 | Msa1119860:intron | 10.0% |
| !! | TATATTATATTTATAACCTT+AGG | + | chr7_3:69010921-69010940 | Msa1119860:intron | 10.0% |
| !! | AACTAAACTAAAATGAATTA+AGG | - | chr7_3:69009541-69009560 | None:intergenic | 15.0% |
| !!! | AATTCATTTTAGTTTAGTTT+AGG | + | chr7_3:69009542-69009561 | Msa1119860:intron | 15.0% |
| !!! | AAAATATTTTAGCAAAACTT+GGG | - | chr7_3:69009842-69009861 | None:intergenic | 15.0% |
| !! | AAAGAAACTTATATTAAGAA+GGG | + | chr7_3:69011846-69011865 | Msa1119860:three_prime_UTR | 15.0% |
| !! | TCAATTTATAGAATAGGAAT+AGG | - | chr7_3:69009239-69009258 | None:intergenic | 20.0% |
| !! | TTGGTTTCAATTTATAGAAT+AGG | - | chr7_3:69009245-69009264 | None:intergenic | 20.0% |
| !! | ATTAGTAGTGTTTATATAGT+GGG | + | chr7_3:69009687-69009706 | Msa1119860:intron | 20.0% |
| !!! | AAATATTTTAGCAAAACTTG+GGG | - | chr7_3:69009841-69009860 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGCAAAACT+TGG | - | chr7_3:69009843-69009862 | None:intergenic | 20.0% |
| !!! | CAAGTTTTGCTAAAATATTT+TGG | + | chr7_3:69009841-69009860 | Msa1119860:intron | 20.0% |
| !! | TAAGAACACTCTTAAAAATA+TGG | - | chr7_3:69010238-69010257 | None:intergenic | 20.0% |
| !! | CGAAAATTATTATTACGAAA+GGG | - | chr7_3:69010378-69010397 | None:intergenic | 20.0% |
| !! | ACGAAAATTATTATTACGAA+AGG | - | chr7_3:69010379-69010398 | None:intergenic | 20.0% |
| !! | GTAATAATACCATATTAAAG+TGG | + | chr7_3:69010591-69010610 | Msa1119860:intron | 20.0% |
| !!! | TAGTATATTATTAGTTTCCA+TGG | + | chr7_3:69010991-69011010 | Msa1119860:intron | 20.0% |
| !!! | ATCTCTATAAGTTATTCTTT+TGG | + | chr7_3:69011220-69011239 | Msa1119860:intron | 20.0% |
| !! | AATAACACAAACAAATGTTA+TGG | - | chr7_3:69011301-69011320 | None:intergenic | 20.0% |
| !! | CAAAGAAACTTATATTAAGA+AGG | + | chr7_3:69011845-69011864 | Msa1119860:three_prime_UTR | 20.0% |
| !! | ATATTAAGAAGGGAATATAA+TGG | + | chr7_3:69011856-69011875 | Msa1119860:three_prime_UTR | 20.0% |
| !! | TATTAAGAAGGGAATATAAT+GGG | + | chr7_3:69011857-69011876 | Msa1119860:three_prime_UTR | 20.0% |
| !! | GATATTTAGTATTGAGGATA+AGG | - | chr7_3:69009193-69009212 | None:intergenic | 25.0% |
| !! | ATTAATCTTCTAAGGAAGTT+TGG | - | chr7_3:69009264-69009283 | None:intergenic | 25.0% |
| ! | TGAGATGAATTAATCTTCTA+AGG | - | chr7_3:69009272-69009291 | None:intergenic | 25.0% |
| ! | GAAGATTAATTCATCTCAAA+AGG | + | chr7_3:69009274-69009293 | Msa1119860:five_prime_UTR | 25.0% |
| !!! | TTTAGTTTAGGTTTTCTGTT+TGG | + | chr7_3:69009554-69009573 | Msa1119860:intron | 25.0% |
| ! | TAAACACAAATTTCCATGTT+GGG | + | chr7_3:69009605-69009624 | Msa1119860:intron | 25.0% |
| ! | TGTTGTGTGAATTAAAAAAG+TGG | + | chr7_3:69009637-69009656 | Msa1119860:intron | 25.0% |
| ! | CATTAGTAGTGTTTATATAG+TGG | + | chr7_3:69009686-69009705 | Msa1119860:intron | 25.0% |
| ! | TTAGTAGTGTTTATATAGTG+GGG | + | chr7_3:69009688-69009707 | Msa1119860:intron | 25.0% |
| ! | CAAGTAATATGAGAAACTTT+GGG | - | chr7_3:69009984-69010003 | None:intergenic | 25.0% |
| ! | ACAAGTAATATGAGAAACTT+TGG | - | chr7_3:69009985-69010004 | None:intergenic | 25.0% |
| ! | ACTAATAAGTGAGAAACTTT+GGG | - | chr7_3:69010009-69010028 | None:intergenic | 25.0% |
| ! | AACTAATAAGTGAGAAACTT+TGG | - | chr7_3:69010010-69010029 | None:intergenic | 25.0% |
| ! | ATGTGAGTTCTCTATTTATA+GGG | - | chr7_3:69010042-69010061 | None:intergenic | 25.0% |
| ! | TATGTGAGTTCTCTATTTAT+AGG | - | chr7_3:69010043-69010062 | None:intergenic | 25.0% |
| !! | CAACTCAATGAAATTCTTTT+CGG | - | chr7_3:69010080-69010099 | None:intergenic | 25.0% |
| !! | AAAGAATTTCATTGAGTTGT+CGG | + | chr7_3:69010081-69010100 | Msa1119860:intron | 25.0% |
| !! | TTTTTCTATTTGAGGAGAAA+TGG | + | chr7_3:69010458-69010477 | Msa1119860:intron | 25.0% |
| ! | GGTATTATTACCATTCTATA+TGG | - | chr7_3:69010582-69010601 | None:intergenic | 25.0% |
| ! | ATACTGAAACCACTTTAATA+TGG | - | chr7_3:69010603-69010622 | None:intergenic | 25.0% |
| !!! | CCTAAGAAAATGTTGTTTTT+TGG | - | chr7_3:69010873-69010892 | None:intergenic | 25.0% |
| !! | CCAAAAAACAACATTTTCTT+AGG | + | chr7_3:69010870-69010889 | Msa1119860:intron | 25.0% |
| !! | TATTATTAGTTTCCATGGTA+TGG | + | chr7_3:69010996-69011015 | Msa1119860:intron | 25.0% |
| ! | TAGCTTAAAAAAACCATTGA+AGG | - | chr7_3:69011043-69011062 | None:intergenic | 25.0% |
| !!! | GACTTTTAGAATTTTGTTTC+AGG | + | chr7_3:69011242-69011261 | Msa1119860:intron | 25.0% |
| !! | TTTGTTTCAGGACTAAATTT+TGG | + | chr7_3:69011254-69011273 | Msa1119860:intron | 25.0% |
| ! | ATCAGAATTGTGATGTTAAA+TGG | + | chr7_3:69011565-69011584 | Msa1119860:intron | 25.0% |
| !! | GTGCTTTTGTTCTTATAATT+GGG | - | chr7_3:69011897-69011916 | None:intergenic | 25.0% |
| !! | TGTGCTTTTGTTCTTATAAT+TGG | - | chr7_3:69011898-69011917 | None:intergenic | 25.0% |
| !! | AATTATAAGAACAAAAGCAC+AGG | + | chr7_3:69011897-69011916 | Msa1119860:three_prime_UTR | 25.0% |
| GGATGAGATATTTAGTATTG+AGG | - | chr7_3:69009199-69009218 | None:intergenic | 30.0% | |
| ATCTCATCCATTACAATGAT+AGG | + | chr7_3:69009210-69009229 | Msa1119860:five_prime_UTR | 30.0% | |
| GAATTGTAATCAACTGTTGA+AGG | - | chr7_3:69009488-69009507 | None:intergenic | 30.0% | |
| ATTAAGGTGATAGAGAATGA+AGG | - | chr7_3:69009525-69009544 | None:intergenic | 30.0% | |
| CTAAACACAAATTTCCATGT+TGG | + | chr7_3:69009604-69009623 | Msa1119860:intron | 30.0% | |
| TAGTAGTGTTTATATAGTGG+GGG | + | chr7_3:69009689-69009708 | Msa1119860:intron | 30.0% | |
| ! | AAGAATTTCATTGAGTTGTC+GGG | + | chr7_3:69010082-69010101 | Msa1119860:intron | 30.0% |
| !! | AGAAACTTGTTAACACAAGT+CGG | - | chr7_3:69010131-69010150 | None:intergenic | 30.0% |
| AGGGACATATATTATCGAAA+GGG | - | chr7_3:69010324-69010343 | None:intergenic | 30.0% | |
| AAGGGACATATATTATCGAA+AGG | - | chr7_3:69010325-69010344 | None:intergenic | 30.0% | |
| TTCGATAATATATGTCCCTT+CGG | + | chr7_3:69010325-69010344 | Msa1119860:intron | 30.0% | |
| ATAGTACTCTTTATTCCGAA+GGG | - | chr7_3:69010343-69010362 | None:intergenic | 30.0% | |
| AATAGTACTCTTTATTCCGA+AGG | - | chr7_3:69010344-69010363 | None:intergenic | 30.0% | |
| AAGATCATTCATAATTCCGA+CGG | - | chr7_3:69010414-69010433 | None:intergenic | 30.0% | |
| GTAGTACCATATTGAAAGTT+TGG | + | chr7_3:69010505-69010524 | Msa1119860:intron | 30.0% | |
| AGTTCTCCAAACTTTCAATA+TGG | - | chr7_3:69010514-69010533 | None:intergenic | 30.0% | |
| TGAAAGTTTGGAGAACTTAA+AGG | + | chr7_3:69010517-69010536 | Msa1119860:intron | 30.0% | |
| GAGAATTACACCTTCAAATA+TGG | - | chr7_3:69010644-69010663 | None:intergenic | 30.0% | |
| CTTCGGTAGATAATAGAATT+TGG | + | chr7_3:69010821-69010840 | Msa1119860:intron | 30.0% | |
| GAAATCCAAATACAACAGTT+TGG | + | chr7_3:69010843-69010862 | Msa1119860:intron | 30.0% | |
| GATTTCCAAACTGTTGTATT+TGG | - | chr7_3:69010851-69010870 | None:intergenic | 30.0% | |
| !! | AGATCGTGCTCATTATTTTT+AGG | + | chr7_3:69010950-69010969 | Msa1119860:intron | 30.0% |
| ATCTACCTATTTGTGACAAA+TGG | + | chr7_3:69011071-69011090 | Msa1119860:intron | 30.0% | |
| GATTACCATTTGTCACAAAT+AGG | - | chr7_3:69011079-69011098 | None:intergenic | 30.0% | |
| !!! | AATGGATGATGTGTTTTTTC+AGG | + | chr7_3:69011583-69011602 | Msa1119860:intron | 30.0% |
| !!! | ATGGATGATGTGTTTTTTCA+GGG | + | chr7_3:69011584-69011603 | Msa1119860:intron | 30.0% |
| ATCTATCTCCCAAGACAAAA+AGG | + | chr7_3:69009164-69009183 | Msa1119860:five_prime_UTR | 35.0% | |
| ! | TAAGGTTGCCTTTTTGTCTT+GGG | - | chr7_3:69009175-69009194 | None:intergenic | 35.0% |
| ! | ATAAGGTTGCCTTTTTGTCT+TGG | - | chr7_3:69009176-69009195 | None:intergenic | 35.0% |
| TAGGACACCTATCATTGTAA+TGG | - | chr7_3:69009220-69009239 | None:intergenic | 35.0% | |
| !! | ACACTCTTTGGTGTTGTTAA+AGG | - | chr7_3:69009362-69009381 | None:intergenic | 35.0% |
| !! | TTTTCTGTTTGGAACATGTG+TGG | + | chr7_3:69009565-69009584 | Msa1119860:intron | 35.0% |
| !! | ATGAAATTCTTTTCGGTGTG+TGG | - | chr7_3:69010073-69010092 | None:intergenic | 35.0% |
| ! | TTAAGACCATAGTCCCTTTT+CGG | + | chr7_3:69010255-69010274 | Msa1119860:intron | 35.0% |
| ATTAAACCGAAAAGGGACTA+TGG | - | chr7_3:69010264-69010283 | None:intergenic | 35.0% | |
| AAGGGACATTAAACCGAAAA+GGG | - | chr7_3:69010271-69010290 | None:intergenic | 35.0% | |
| AGACCACTCTTAATTTCGAA+GGG | - | chr7_3:69010289-69010308 | None:intergenic | 35.0% | |
| AAGACCACTCTTAATTTCGA+AGG | - | chr7_3:69010290-69010309 | None:intergenic | 35.0% | |
| TCGTAATAATAATGTCCCGT+CGG | + | chr7_3:69010395-69010414 | Msa1119860:intron | 35.0% | |
| AGATCATTCATAATTCCGAC+GGG | - | chr7_3:69010413-69010432 | None:intergenic | 35.0% | |
| TTCTATTTGAGGAGAAATGG+TGG | + | chr7_3:69010461-69010480 | Msa1119860:intron | 35.0% | |
| GGAGAACTTAAAGGTTAGAA+TGG | + | chr7_3:69010526-69010545 | Msa1119860:intron | 35.0% | |
| GAACTTAAAGGTTAGAATGG+TGG | + | chr7_3:69010529-69010548 | Msa1119860:intron | 35.0% | |
| GTGGTTTCAGTATTAAAGAG+TGG | + | chr7_3:69010610-69010629 | Msa1119860:intron | 35.0% | |
| GGTCTTAGTACCATATTTGA+AGG | + | chr7_3:69010631-69010650 | Msa1119860:intron | 35.0% | |
| ! | TTGAAGGTGTAATTCTCGAA+CGG | + | chr7_3:69010647-69010666 | Msa1119860:intron | 35.0% |
| ! | AATTCTCGAACGGTTTTCTA+CGG | + | chr7_3:69010657-69010676 | Msa1119860:intron | 35.0% |
| ! | TAGTCTACCTTGCACAATTT+TGG | + | chr7_3:69010741-69010760 | Msa1119860:intron | 35.0% |
| ! | AGTCTACCTTGCACAATTTT+GGG | + | chr7_3:69010742-69010761 | Msa1119860:intron | 35.0% |
| ACTCAACCTAGTAACAACTT+CGG | + | chr7_3:69010804-69010823 | Msa1119860:intron | 35.0% | |
| TATCTACCGAAGTTGTTACT+AGG | - | chr7_3:69010813-69010832 | None:intergenic | 35.0% | |
| !! | AATTTTGGAGAGTCACAACA+TGG | + | chr7_3:69011269-69011288 | Msa1119860:intron | 35.0% |
| ATAGCGAAATCTTACGTCTT+AGG | - | chr7_3:69011490-69011509 | None:intergenic | 35.0% | |
| TGTGAGCCTGATTATCAAAA+GGG | + | chr7_3:69011648-69011667 | Msa1119860:CDS | 35.0% | |
| !! | TAGACACCCTTTTGATAATC+AGG | - | chr7_3:69011657-69011676 | None:intergenic | 35.0% |
| GAAAAACCTTCTTATTGCCT+TGG | + | chr7_3:69011689-69011708 | Msa1119860:three_prime_UTR | 35.0% | |
| ATGAGGAATCACCCTTATAT+AGG | + | chr7_3:69012077-69012096 | Msa1119860:three_prime_UTR | 35.0% | |
| ! | GAGCTGTCTGCATTTTTGAA+GGG | - | chr7_3:69009313-69009332 | None:intergenic | 40.0% |
| ! | AGAGCTGTCTGCATTTTTGA+AGG | - | chr7_3:69009314-69009333 | None:intergenic | 40.0% |
| ! | TGTTAAAGGCACAAAGGTAG+TGG | - | chr7_3:69009348-69009367 | None:intergenic | 40.0% |
| !! | TGGTGTTGTTAAAGGCACAA+AGG | - | chr7_3:69009354-69009373 | None:intergenic | 40.0% |
| GCAAGATGTGAAACACTCTT+TGG | - | chr7_3:69009374-69009393 | None:intergenic | 40.0% | |
| GTGAGGCAATCAATTTGGTA+GGG | - | chr7_3:69009412-69009431 | None:intergenic | 40.0% | |
| AGAACGTGAGGCAATCAATT+TGG | - | chr7_3:69009417-69009436 | None:intergenic | 40.0% | |
| TGTTGAAGGATCAGAGTTGT+CGG | - | chr7_3:69009474-69009493 | None:intergenic | 40.0% | |
| !! | AACACTAGTTCTACCCAACA+TGG | - | chr7_3:69009621-69009640 | None:intergenic | 40.0% |
| AAAAAGTGGAAGTCCCACAT+CGG | + | chr7_3:69009651-69009670 | Msa1119860:intron | 40.0% | |
| GGGGTGTACCTCTAATTAAT+GGG | + | chr7_3:69009708-69009727 | Msa1119860:intron | 40.0% | |
| GGGTGTACCTCTAATTAATG+GGG | + | chr7_3:69009709-69009728 | Msa1119860:intron | 40.0% | |
| GGTGTACCTCTAATTAATGG+GGG | + | chr7_3:69009710-69009729 | Msa1119860:intron | 40.0% | |
| GTGTACCTCTAATTAATGGG+GGG | + | chr7_3:69009711-69009730 | Msa1119860:intron | 40.0% | |
| ATGTACCCCCCATTAATTAG+AGG | - | chr7_3:69009719-69009738 | None:intergenic | 40.0% | |
| ! | ACTTGTTAACACAAGTCGGA+GGG | - | chr7_3:69010127-69010146 | None:intergenic | 40.0% |
| !! | AACTTGTTAACACAAGTCGG+AGG | - | chr7_3:69010128-69010147 | None:intergenic | 40.0% |
| ! | CGCTCTATTTGAAACCGAAA+GGG | - | chr7_3:69010175-69010194 | None:intergenic | 40.0% |
| CCTTTCGGTTTCAAATAGAG+CGG | + | chr7_3:69010173-69010192 | Msa1119860:intron | 40.0% | |
| TTGATCGAAACCACTCGATA+CGG | - | chr7_3:69010206-69010225 | None:intergenic | 40.0% | |
| GAAGGGACATTAAACCGAAA+AGG | - | chr7_3:69010272-69010291 | None:intergenic | 40.0% | |
| TGTCCCTTCGAAATTAAGAG+TGG | + | chr7_3:69010283-69010302 | Msa1119860:intron | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | + | chr7_3:69010480-69010499 | Msa1119860:intron | 40.0% | |
| GTACTACGACCACTCAAATA+TGG | - | chr7_3:69010492-69010511 | None:intergenic | 40.0% | |
| GTGGAAACACCATATTTGAG+TGG | + | chr7_3:69010548-69010567 | Msa1119860:intron | 40.0% | |
| GTGCTAAGACCACTCAAATA+TGG | - | chr7_3:69010560-69010579 | None:intergenic | 40.0% | |
| GGTCTTAGCACCATATAGAA+TGG | + | chr7_3:69010569-69010588 | Msa1119860:intron | 40.0% | |
| AACGTCTTAAAGAAGCGACT+TGG | + | chr7_3:69010776-69010795 | Msa1119860:intron | 40.0% | |
| CAAGTGTTTGAACCATACCA+TGG | - | chr7_3:69011011-69011030 | None:intergenic | 40.0% | |
| CTTGCATGAAACTCCTTCAA+TGG | + | chr7_3:69011027-69011046 | Msa1119860:intron | 40.0% | |
| CTGTGAGCCTGATTATCAAA+AGG | + | chr7_3:69011647-69011666 | Msa1119860:CDS | 40.0% | |
| CAATAGCCAAGGCAATAAGA+AGG | - | chr7_3:69011698-69011717 | None:intergenic | 40.0% | |
| GTTGTAAGCTTCAATAGCCA+AGG | - | chr7_3:69011709-69011728 | None:intergenic | 40.0% | |
| ! | AAAAGCACAGGCAATACAGA+TGG | + | chr7_3:69011909-69011928 | Msa1119860:three_prime_UTR | 40.0% |
| CTCAAGTCAGAATGTGAATG+AGG | + | chr7_3:69012008-69012027 | Msa1119860:three_prime_UTR | 40.0% | |
| AAGTCAGAATGTGAATGAGG+TGG | + | chr7_3:69012011-69012030 | Msa1119860:three_prime_UTR | 40.0% | |
| AGGTGGTTAAGCATAATGCA+AGG | + | chr7_3:69012028-69012047 | Msa1119860:three_prime_UTR | 40.0% | |
| GAATCACCCTTATATAGGTG+TGG | + | chr7_3:69012082-69012101 | Msa1119860:three_prime_UTR | 40.0% | |
| AAGCCTCCACACCTATATAA+GGG | - | chr7_3:69012091-69012110 | None:intergenic | 40.0% | |
| CGTGAGGCAATCAATTTGGT+AGG | - | chr7_3:69009413-69009432 | None:intergenic | 45.0% | |
| ACTTTGATTGCAGTGTAGCG+AGG | - | chr7_3:69009446-69009465 | None:intergenic | 45.0% | |
| ! | GGGGGTGTACCTCTAATTAA+TGG | + | chr7_3:69009707-69009726 | Msa1119860:intron | 45.0% |
| CTACTCCTTTCTGTCCCTTT+CGG | + | chr7_3:69010158-69010177 | Msa1119860:intron | 45.0% | |
| TGAAACCGAAAGGGACAGAA+AGG | - | chr7_3:69010166-69010185 | None:intergenic | 45.0% | |
| ! | CCGCTCTATTTGAAACCGAA+AGG | - | chr7_3:69010176-69010195 | None:intergenic | 45.0% |
| TTAACCGCACAGTTGTAGCT+GGG | + | chr7_3:69010688-69010707 | Msa1119860:intron | 45.0% | |
| !!! | TAGCTGGGCTTGTTTTATCC+TGG | + | chr7_3:69010703-69010722 | Msa1119860:intron | 45.0% |
| GCACTACCCAAAATTGTGCA+AGG | - | chr7_3:69010751-69010770 | None:intergenic | 45.0% | |
| !! | CGCTTCTTTAAGACGTTTCG+TGG | - | chr7_3:69010773-69010792 | None:intergenic | 45.0% |
| AGCACGATCTGTACTTCCTA+AGG | - | chr7_3:69010940-69010959 | None:intergenic | 45.0% | |
| GGTGTATCATTCCTTGCTTC+AGG | - | chr7_3:69011415-69011434 | None:intergenic | 45.0% | |
| AGCTTCAGGGAACATTGAGA+GGG | + | chr7_3:69011444-69011463 | Msa1119860:CDS | 45.0% | |
| ! | TTTCAGGGTTTTCCAAGCAG+AGG | + | chr7_3:69011599-69011618 | Msa1119860:intron | 45.0% |
| GCAATACAGATGGATGCTCA+TGG | + | chr7_3:69011919-69011938 | Msa1119860:three_prime_UTR | 45.0% | |
| ! | TCACATTCTGACTTGAGCGT+TGG | - | chr7_3:69012005-69012024 | None:intergenic | 45.0% |
| TGAAAGTGAATCGTACCTCG+AGG | + | chr7_3:69012051-69012070 | Msa1119860:three_prime_UTR | 45.0% | |
| GAAAGTGAATCGTACCTCGA+GGG | + | chr7_3:69012052-69012071 | Msa1119860:three_prime_UTR | 45.0% | |
| TCACCCTTATATAGGTGTGG+AGG | + | chr7_3:69012085-69012104 | Msa1119860:three_prime_UTR | 45.0% | |
| CAAGCCTCCACACCTATATA+AGG | - | chr7_3:69012092-69012111 | None:intergenic | 45.0% | |
| !!! | TTGATATATATTTTATTATT+TGG | + | chr7_3:69009762-69009781 | Msa1119860:intron | 5.0% |
| ! | CACAAAGGTAGTGGCTGCAA+AGG | - | chr7_3:69009339-69009358 | None:intergenic | 50.0% |
| GTGTGTGTTCCATCCGATGT+GGG | - | chr7_3:69009667-69009686 | None:intergenic | 50.0% | |
| TGTGTGTGTTCCATCCGATG+TGG | - | chr7_3:69009668-69009687 | None:intergenic | 50.0% | |
| GTTAACCGCACAGTTGTAGC+TGG | + | chr7_3:69010687-69010706 | Msa1119860:intron | 50.0% | |
| !!! | CTGGGCTTGTTTTATCCTGG+AGG | + | chr7_3:69010706-69010725 | Msa1119860:intron | 50.0% |
| !!! | GGCTTGTTTTATCCTGGAGG+CGG | + | chr7_3:69010709-69010728 | Msa1119860:intron | 50.0% |
| ! | TGTCAGAGTGTTTCCAGCTG+AGG | + | chr7_3:69011327-69011346 | Msa1119860:intron | 50.0% |
| TCCAGCTGAGGCATGTGAAA+CGG | + | chr7_3:69011339-69011358 | Msa1119860:CDS | 50.0% | |
| AGGCATGTGAAACGGTTGGA+GGG | + | chr7_3:69011347-69011366 | Msa1119860:CDS | 50.0% | |
| ACACCAAAGACTGCAGCTTC+AGG | + | chr7_3:69011430-69011449 | Msa1119860:CDS | 50.0% | |
| CACCAAAGACTGCAGCTTCA+GGG | + | chr7_3:69011431-69011450 | Msa1119860:CDS | 50.0% | |
| TTCCCTGAAGCTGCAGTCTT+TGG | - | chr7_3:69011436-69011455 | None:intergenic | 50.0% | |
| CAGCTTCAGGGAACATTGAG+AGG | + | chr7_3:69011443-69011462 | Msa1119860:CDS | 50.0% | |
| GATCATCACAAGCCTCTGCT+TGG | - | chr7_3:69011614-69011633 | None:intergenic | 50.0% | |
| GCAGAGGCTTGTGATGATCT+TGG | + | chr7_3:69011615-69011634 | Msa1119860:CDS | 50.0% | |
| GAGGCTTGTGATGATCTTGG+AGG | + | chr7_3:69011618-69011637 | Msa1119860:CDS | 50.0% | |
| ACAGATGGATGCTCATGGTG+CGG | + | chr7_3:69011924-69011943 | Msa1119860:three_prime_UTR | 50.0% | |
| ! | TGGAGTGCTAACGCACTTGT+AGG | - | chr7_3:69011985-69012004 | None:intergenic | 50.0% |
| GCGAGGTGAAGAAGAACGTG+AGG | - | chr7_3:69009429-69009448 | None:intergenic | 55.0% | |
| AGTGGAAGTCCCACATCGGA+TGG | + | chr7_3:69009655-69009674 | Msa1119860:intron | 55.0% | |
| CGGTTACGTACCGTATCGAG+TGG | + | chr7_3:69010193-69010212 | Msa1119860:intron | 55.0% | |
| CAAGCCCAGCTACAACTGTG+CGG | - | chr7_3:69010695-69010714 | None:intergenic | 55.0% | |
| ACCGTTTCACATGCCTCAGC+TGG | - | chr7_3:69011343-69011362 | None:intergenic | 55.0% | |
| GCTGAGGCATGTGAAACGGT+TGG | + | chr7_3:69011343-69011362 | Msa1119860:CDS | 55.0% | |
| GAGGCATGTGAAACGGTTGG+AGG | + | chr7_3:69011346-69011365 | Msa1119860:CDS | 55.0% | |
| GGCATGTGAAACGGTTGGAG+GGG | + | chr7_3:69011348-69011367 | Msa1119860:CDS | 55.0% | |
| GGTTGGAGGGGATGCTTGTT+TGG | + | chr7_3:69011360-69011379 | Msa1119860:CDS | 55.0% | |
| TCAGGCTGCAGCTTGACTTC+AGG | - | chr7_3:69011397-69011416 | None:intergenic | 55.0% | |
| TCAAGCTGCAGCCTGAAGCA+AGG | + | chr7_3:69011401-69011420 | Msa1119860:CDS | 55.0% | |
| ! | GGTACTTTTCACTCCCACCG+TGG | - | chr7_3:69011964-69011983 | None:intergenic | 55.0% |
| ATCGTACCTCGAGGGTGATG+AGG | + | chr7_3:69012060-69012079 | Msa1119860:three_prime_UTR | 55.0% | |
| GTGATTCCTCATCACCCTCG+AGG | - | chr7_3:69012069-69012088 | None:intergenic | 55.0% | |
| ! | GTTTTATCCTGGAGGCGGCG+TGG | + | chr7_3:69010714-69010733 | Msa1119860:intron | 60.0% |
| CCACCGTGGAATCACCAGCT+CGG | - | chr7_3:69011950-69011969 | None:intergenic | 60.0% | |
| CGAGCTGGTGATTCCACGGT+GGG | + | chr7_3:69011948-69011967 | Msa1119860:three_prime_UTR | 60.0% | |
| CTATCAACCACGCCGCCTCC+AGG | - | chr7_3:69010724-69010743 | None:intergenic | 65.0% | |
| CGGCCGAGCTGGTGATTCCA+CGG | + | chr7_3:69011944-69011963 | Msa1119860:three_prime_UTR | 65.0% | |
| CCGAGCTGGTGATTCCACGG+TGG | + | chr7_3:69011947-69011966 | Msa1119860:three_prime_UTR | 65.0% | |
| TGCTCATGGTGCGGCCGAGC+TGG | + | chr7_3:69011933-69011952 | Msa1119860:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 69009159 | 69012121 | 69009159 | ID=Msa1119860;Name=Msa1119860 |
| chr7_3 | mRNA | 69009159 | 69012121 | 69009159 | ID=Msa1119860-mRNA-1;Parent=Msa1119860;Name=Msa1119860-mRNA-1;_AED=0.01;_eAED=0.01;_QI=161|1|1|1|1|1|3|441|144 |
| chr7_3 | exon | 69009159 | 69009516 | 69009159 | ID=Msa1119860-mRNA-1:exon:17333;Parent=Msa1119860-mRNA-1 |
| chr7_3 | exon | 69011333 | 69011494 | 69011333 | ID=Msa1119860-mRNA-1:exon:17334;Parent=Msa1119860-mRNA-1 |
| chr7_3 | exon | 69011605 | 69012121 | 69011605 | ID=Msa1119860-mRNA-1:exon:17335;Parent=Msa1119860-mRNA-1 |
| chr7_3 | five_prime_UTR | 69009159 | 69009319 | 69009159 | ID=Msa1119860-mRNA-1:five_prime_utr;Parent=Msa1119860-mRNA-1 |
| chr7_3 | CDS | 69009320 | 69009516 | 69009320 | ID=Msa1119860-mRNA-1:cds;Parent=Msa1119860-mRNA-1 |
| chr7_3 | CDS | 69011333 | 69011494 | 69011333 | ID=Msa1119860-mRNA-1:cds;Parent=Msa1119860-mRNA-1 |
| chr7_3 | CDS | 69011605 | 69011680 | 69011605 | ID=Msa1119860-mRNA-1:cds;Parent=Msa1119860-mRNA-1 |
| chr7_3 | three_prime_UTR | 69011681 | 69012121 | 69011681 | ID=Msa1119860-mRNA-1:three_prime_utr;Parent=Msa1119860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
