AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0377400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0377400 MtrunA17_Chr2g0282451 95.726 234 10 0 1 234 1 234 2.20e-163 451
Msa0377400 MtrunA17_Chr7g0269061 95.726 234 10 0 1 234 1 234 3.56e-163 450
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0377400 AT2G27490.2 72.000 225 63 0 1 225 1 225 1.58e-118 337
Msa0377400 AT2G27490.3 72.000 225 63 0 1 225 1 225 1.58e-118 337
Msa0377400 AT2G27490.1 72.000 225 63 0 1 225 1 225 1.58e-118 337
Msa0377400 AT2G27490.4 72.000 225 63 0 1 225 1 225 1.58e-118 337

Find 141 sgRNAs with CRISPR-Local

Find 710 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATATTATTGATATATTTA+TGG 0.125983 3_1:+77854308 Msa0377400:three_prime_UTR
GGTATGTCATATCTATTTAT+TGG 0.172164 3_1:-77853482 None:intergenic
AGTCTCTGAATCTGTGTTTC+AGG 0.209401 3_1:-77853127 None:intergenic
ATCAACCCACACAACAATTA+TGG 0.226242 3_1:-77853104 None:intergenic
ATATATCCTCGGGGATCTTT+TGG 0.227206 3_1:+77852990 Msa0377400:CDS
TCCCAACCAACGGCAATAAA+AGG 0.227221 3_1:-77853595 None:intergenic
TGTCTTGGAGGCATTGGATT+TGG 0.235211 3_1:-77853894 None:intergenic
GTATGTCATATCTATTTATT+GGG 0.258375 3_1:-77853481 None:intergenic
CCTTGACATGGTATGAGTTT+TGG 0.281857 3_1:+77853314 Msa0377400:CDS
GAAAATAAAGGGATGTAATC+TGG 0.288439 3_1:-77843169 None:intergenic
AGTTTATGAACAATATAATA+AGG 0.294358 3_1:+77853940 Msa0377400:three_prime_UTR
TTGAGAAATTGACGCTTATC+AGG 0.303211 3_1:-77852866 None:intergenic
AGTTCTTGAAACTTGATCTA+TGG 0.305756 3_1:-77853503 None:intergenic
CGTGAGAAATAAGAAAATAA+AGG 0.321742 3_1:-77843181 None:intergenic
ATCGGATCCTTAGGTGTTCT+TGG 0.327992 3_1:-77843990 None:intergenic
CACCTAAGGATCCGATTATT+AGG 0.328713 3_1:+77843997 Msa0377400:five_prime_UTR
TGAACAATTTCAGAACGTTT+TGG 0.336190 3_1:+77853276 Msa0377400:CDS
AACACCAACCTCACCCAAAC+TGG 0.343212 3_1:+77844533 Msa0377400:five_prime_UTR
TATGTTTAAGATGTCCAGTT+TGG 0.343390 3_1:-77844547 None:intergenic
ATTTAAAGAATCAGCGATAA+TGG 0.346826 3_1:-77843313 None:intergenic
GTCTTGGAGGCATTGGATTT+GGG 0.349754 3_1:-77853893 None:intergenic
AGATGCCGCTGGATGGTAAA+AGG 0.351308 3_1:+77853203 Msa0377400:CDS
AGAATCAGCGATAATGGATT+TGG 0.355436 3_1:-77843307 None:intergenic
TGACGTCCCTTTGTTATTTG+AGG 0.363223 3_1:+77853057 Msa0377400:CDS
AAGATACAAAATTTGAAATC+TGG 0.364677 3_1:+77853806 Msa0377400:three_prime_UTR
TTTGGTGCCCTGCATCCTTT+TGG 0.372168 3_1:+77843892 Msa0377400:five_prime_UTR
TATTACATATATATAATTGC+AGG 0.377374 3_1:+77853675 Msa0377400:three_prime_UTR
AAGATCCCCGAGGATATATA+TGG 0.384217 3_1:-77852986 None:intergenic
ATAGAATAAATGAGGATTGT+TGG 0.388584 3_1:+77852528 Msa0377400:exon
GTGAGAACTGAGAGAGATAA+TGG 0.396104 3_1:-77843402 None:intergenic
ACTACATCAGCGTCGACAAC+AGG 0.406465 3_1:-77852615 None:intergenic
ATCTGAAGGTGGACTAATTC+TGG 0.407958 3_1:+77844492 Msa0377400:five_prime_UTR
GTCGTGAGACTTGAATAAAT+TGG 0.409640 3_1:-77852589 None:intergenic
ACATATATAGTTTAATGTCT+TGG 0.412696 3_1:-77853909 None:intergenic
GTTTAATGTCTTGGAGGCAT+TGG 0.422608 3_1:-77853900 None:intergenic
ATGTTTAAGATGTCCAGTTT+GGG 0.431149 3_1:-77844546 None:intergenic
CCTCTGAGAATCAGAACATT+TGG 0.435675 3_1:+77843874 Msa0377400:five_prime_UTR
TACTTGAGCCAACCAACAAA+AGG 0.440758 3_1:+77854124 Msa0377400:three_prime_UTR
TAATACTCAAGAAGAGTTGA+AGG 0.447543 3_1:+77854177 Msa0377400:three_prime_UTR
TGTTGGTTGGCTCAAGTACA+AGG 0.448590 3_1:-77854119 None:intergenic
TAAAGTAATTATCATAATAC+AGG 0.450885 3_1:-77854245 None:intergenic
GTGAGAAATAAGAAAATAAA+GGG 0.452200 3_1:-77843180 None:intergenic
ATTGAAGTATACCTAATAAT+CGG 0.452709 3_1:-77844008 None:intergenic
TCAACCCACACAACAATTAT+GGG 0.455800 3_1:-77853103 None:intergenic
TACTAGGATGCGTTGAAGAA+AGG 0.463219 3_1:+77852740 Msa0377400:intron
GTCAACACATAGGTTGTCAT+TGG 0.464847 3_1:+77853729 Msa0377400:three_prime_UTR
TATATTCACCAAAAGGATGC+AGG 0.468647 3_1:-77843900 None:intergenic
TGCATAATATATTCACCAAA+AGG 0.482121 3_1:-77843907 None:intergenic
TTGGCTCCATATATATCCTC+GGG 0.483634 3_1:+77852980 Msa0377400:CDS
ACTAGGATGCGTTGAAGAAA+GGG 0.487032 3_1:+77852741 Msa0377400:intron
TTAATAGCCGACAAGTTTCA+AGG 0.489514 3_1:+77852493 Msa0377400:five_prime_UTR
CTGGTGTGCTATTTGTGTGA+TGG 0.489663 3_1:+77853855 Msa0377400:three_prime_UTR
ACTGCACCCTTGAAACTTGT+CGG 0.494284 3_1:-77852500 None:intergenic
AAAATAAAGGGATGTAATCT+GGG 0.496160 3_1:-77843168 None:intergenic
ATAAGCGTCAATTTCTCAAT+CGG 0.497613 3_1:+77852870 Msa0377400:CDS
ATTCTCGCTTCATTTACCTC+AGG 0.499986 3_1:+77853361 Msa0377400:CDS
CTCATACCATGTCAAGGGTC+CGG 0.506695 3_1:-77853308 None:intergenic
GAATATTATGATGATATATG+TGG 0.507468 3_1:+77854339 Msa0377400:three_prime_UTR
GATCTCAATCCAATGCCTCC+TGG 0.508671 3_1:+77853836 Msa0377400:three_prime_UTR
GTTGGCTCCATATATATCCT+CGG 0.510068 3_1:+77852979 Msa0377400:CDS
ATTATGCAGCTGCAAGTGCT+TGG 0.511397 3_1:+77843922 Msa0377400:five_prime_UTR
ATGAGGATTGTTGGACTGAC+TGG 0.512619 3_1:+77852537 Msa0377400:CDS
GATTTGAAGAAGATAGTTGA+AGG 0.512801 3_1:-77843380 None:intergenic
GTTCTCACTCAGATTAAGCC+AGG 0.513137 3_1:+77843417 Msa0377400:five_prime_UTR
AATAGCACACCAGGAGGCAT+TGG 0.515850 3_1:-77853845 None:intergenic
TACCTAATAATCGGATCCTT+AGG 0.518302 3_1:-77843999 None:intergenic
TCTGCTTAGTAAAATCATCA+AGG 0.521976 3_1:-77854053 None:intergenic
GTTTATGAACAATATAATAA+GGG 0.524370 3_1:+77853941 Msa0377400:three_prime_UTR
TATATAGTTTAATGTCTTGG+AGG 0.524849 3_1:-77853906 None:intergenic
GTCATTGGATCAAGATCGAT+TGG 0.525007 3_1:+77853744 Msa0377400:three_prime_UTR
TAAGATGTCCAGTTTGGGTG+AGG 0.529177 3_1:-77844541 None:intergenic
AACACAGATTCAGAGACTCT+TGG 0.532676 3_1:+77853132 Msa0377400:CDS
CTATTTGTGTGATGGACTGC+AGG 0.534642 3_1:+77853863 Msa0377400:three_prime_UTR
CGAAGCCCATAATTGTTGTG+TGG 0.541419 3_1:+77853098 Msa0377400:CDS
TGAAGAAAGGGAGCGGCGGA+TGG 0.543910 3_1:+77852753 Msa0377400:CDS
TCTTAGCCTCAAATAACAAA+GGG 0.545675 3_1:-77853063 None:intergenic
AGACTTGAATAAATTGGAAA+CGG 0.547925 3_1:-77852583 None:intergenic
GCTTCAGCTGCTGAAAATTG+TGG 0.553264 3_1:+77854150 Msa0377400:three_prime_UTR
CAAAACATAATATAAGAAAG+TGG 0.559889 3_1:-77853427 None:intergenic
AAAACGATTTGGCCAAGTCT+GGG 0.565501 3_1:-77852836 None:intergenic
GGTCAATGCTCAGATGCCGC+TGG 0.566232 3_1:+77853192 Msa0377400:CDS
ATGTCCAGTTTGGGTGAGGT+TGG 0.566616 3_1:-77844537 None:intergenic
CATCACACAAATAGCACACC+AGG 0.568412 3_1:-77853854 None:intergenic
ACTTGAGCCAACCAACAAAA+GGG 0.575182 3_1:+77854125 Msa0377400:three_prime_UTR
TTTGGGAAGTTGTGAAGCTG+TGG 0.578755 3_1:+77853008 Msa0377400:CDS
CGAGGAGGATGGTCGGAACA+AGG 0.580768 3_1:+77853171 Msa0377400:CDS
TTGTGTGATGGACTGCAGGC+AGG 0.583796 3_1:+77853867 Msa0377400:three_prime_UTR
AGGAGGCATTGGATTGAGAT+CGG 0.584666 3_1:-77853834 None:intergenic
GAAGAGTTGAAGGATTTGCA+AGG 0.584722 3_1:+77854187 Msa0377400:three_prime_UTR
GTTGTGAAGCTGTGGTTGAA+AGG 0.585087 3_1:+77853016 Msa0377400:CDS
ATCTTAGCCTCAAATAACAA+AGG 0.586193 3_1:-77853064 None:intergenic
AGTGATTGATAGAATAAATG+AGG 0.587156 3_1:+77852520 Msa0377400:exon
AAGAAAATCAGACTCAAACA+AGG 0.588974 3_1:-77853571 None:intergenic
GCATTCACCAAGAACACCTA+AGG 0.594242 3_1:+77843983 Msa0377400:five_prime_UTR
TCTCAGAGGAGAGAAGAGAA+AGG 0.597259 3_1:-77843242 None:intergenic
CCAAAACTCATACCATGTCA+AGG 0.598156 3_1:-77853314 None:intergenic
AGTCTAGCGAGGAGGATGGT+CGG 0.598811 3_1:+77853164 Msa0377400:CDS
ATATTCACCAAAAGGATGCA+GGG 0.599347 3_1:-77843899 None:intergenic
AGTTGTTGCCGCGTTTGGGG+AGG 0.599566 3_1:+77852781 Msa0377400:CDS
CTGCTTAGTAAAATCATCAA+GGG 0.599741 3_1:-77854052 None:intergenic
GAAGTTAACAGACCCAGACT+TGG 0.601753 3_1:+77852824 Msa0377400:CDS
AGTTAGGATTGAACATCTGA+AGG 0.601786 3_1:+77844478 Msa0377400:intron
AAAAGTTGTTGCCGCGTTTG+GGG 0.604856 3_1:+77852778 Msa0377400:CDS
GGGTCACCGGACCCTTGACA+TGG 0.606552 3_1:+77853302 Msa0377400:CDS
GAGGAAATTCTACTAGACAA+TGG 0.608332 3_1:+77852800 Msa0377400:CDS
GATAAGTCTAGCGAGGAGGA+TGG 0.608356 3_1:+77853160 Msa0377400:CDS
AATGCTCAGATGCCGCTGGA+TGG 0.610763 3_1:+77853196 Msa0377400:CDS
GAAGCCCATAATTGTTGTGT+GGG 0.612377 3_1:+77853099 Msa0377400:CDS
GCTGTGGTTGAAAGGTTACA+AGG 0.613383 3_1:+77853024 Msa0377400:CDS
AATGGATTTGGTGTGTGGGA+AGG 0.614774 3_1:-77843295 None:intergenic
TAATAGCCGACAAGTTTCAA+GGG 0.617660 3_1:+77852494 Msa0377400:five_prime_UTR
TATGTCATATCTATTTATTG+GGG 0.625257 3_1:-77853480 None:intergenic
TGAAGGTGGACTAATTCTGG+TGG 0.625835 3_1:+77844495 Msa0377400:five_prime_UTR
GCGATAATGGATTTGGTGTG+TGG 0.631377 3_1:-77843300 None:intergenic
TAGAATTTCCTCCCCAAACG+CGG 0.631720 3_1:-77852789 None:intergenic
GTTGGTTGGCTCAAGTACAA+GGG 0.632408 3_1:-77854118 None:intergenic
ATGTGTTGACTGTGAATGCG+TGG 0.635322 3_1:-77853716 None:intergenic
AGAAAATCAGACTCAAACAA+GGG 0.637370 3_1:-77853570 None:intergenic
ATTGGATCAAGATCGATTGG+TGG 0.640365 3_1:+77853747 Msa0377400:three_prime_UTR
CAAAACTCATACCATGTCAA+GGG 0.641999 3_1:-77853313 None:intergenic
CGATAATGGATTTGGTGTGT+GGG 0.644573 3_1:-77843299 None:intergenic
AGGATTGTTGGACTGACTGG+TGG 0.644760 3_1:+77852540 Msa0377400:CDS
CGCATTCACAGTCAACACAT+AGG 0.644870 3_1:+77853719 Msa0377400:three_prime_UTR
GGCAAGAGATAAGTCTAGCG+AGG 0.649336 3_1:+77853153 Msa0377400:CDS
TTCTCACTCAGATTAAGCCA+GGG 0.652666 3_1:+77843418 Msa0377400:five_prime_UTR
GATGCGTTGAAGAAAGGGAG+CGG 0.653195 3_1:+77852746 Msa0377400:CDS
TAGGATTGAACATCTGAAGG+TGG 0.657919 3_1:+77844481 Msa0377400:five_prime_UTR
CAGTATGGAAAACTATGAAG+CGG 0.661448 3_1:+77843144 None:intergenic
GATATAGTAATCGACAACAC+TGG 0.662812 3_1:+77853235 Msa0377400:CDS
CCAAATGTTCTGATTCTCAG+AGG 0.676485 3_1:-77843874 None:intergenic
TGCTGCGATTTGCTTCTCAG+AGG 0.678643 3_1:-77843256 None:intergenic
ATTGTGAAAGAAATACACAC+TGG 0.680544 3_1:-77853982 None:intergenic
AAGAGATAAGTCTAGCGAGG+AGG 0.683714 3_1:+77853156 Msa0377400:CDS
GCGTTGAAGAAAGGGAGCGG+CGG 0.690363 3_1:+77852749 Msa0377400:CDS
CAGAGGAGAGAAGAGAAAGG+CGG 0.691647 3_1:-77843239 None:intergenic
CTACATCAGCGTCGACAACA+GGG 0.699636 3_1:-77852614 None:intergenic
CACACAAATAGCACACCAGG+AGG 0.712829 3_1:-77853851 None:intergenic
TGGCTCCATATATATCCTCG+GGG 0.732858 3_1:+77852981 Msa0377400:CDS
CATACATAGAACAACACCTG+AGG 0.740107 3_1:-77853377 None:intergenic
CTGACTGGTGGAATAGCAAG+TGG 0.743435 3_1:+77852552 Msa0377400:CDS
AACTTCCCAAAAGATCCCCG+AGG 0.762062 3_1:-77852996 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATGAAATGTTTTTTTTT+TGG + chr3_1:77843845-77843864 Msa0377400:intron 10.0%
!! AATTAGAACAATATAATAAA+AGG - chr3_1:77844636-77844655 None:intergenic 10.0%
!! AAATAATAAAATTGTTAGTT+CGG - chr3_1:77845805-77845824 None:intergenic 10.0%
!! TAATGAAATAATATTAAGAT+GGG - chr3_1:77846359-77846378 None:intergenic 10.0%
!! ATAATGAAATAATATTAAGA+TGG - chr3_1:77846360-77846379 None:intergenic 10.0%
!!! TGTTATCTTTAAAATTAATT+AGG + chr3_1:77848989-77849008 Msa0377400:intron 10.0%
!!! GTTATCTTTAAAATTAATTA+GGG + chr3_1:77848990-77849009 Msa0377400:intron 10.0%
!! AAATAATCAAATAATTAAGA+CGG - chr3_1:77851214-77851233 None:intergenic 10.0%
!! TGATTTATAAATTAATTATG+TGG + chr3_1:77851320-77851339 Msa0377400:intron 10.0%
!! GATTTATAAATTAATTATGT+GGG + chr3_1:77851321-77851340 Msa0377400:intron 10.0%
!!! ACTAATTTTCAATATTATTA+AGG + chr3_1:77851625-77851644 Msa0377400:intron 10.0%
!! GAATATTATTGATATATTTA+TGG + chr3_1:77854308-77854327 Msa0377400:three_prime_UTR 10.0%
!!! AGAATTTGTGAATATTTTTA+GGG + chr3_1:77843505-77843524 Msa0377400:intron 15.0%
!! ATAAACATTTCATTAACTAT+AGG - chr3_1:77843797-77843816 None:intergenic 15.0%
!! ATATTTAGAGATTAATAAGT+TGG + chr3_1:77845233-77845252 Msa0377400:intron 15.0%
!!! TACAAATAGAAATTTTAACA+TGG + chr3_1:77846432-77846451 Msa0377400:intron 15.0%
!! AATAATCAAATAATTAAGAC+GGG - chr3_1:77851213-77851232 None:intergenic 15.0%
!! ATACAAGTATTATAAATAGA+AGG + chr3_1:77851479-77851498 Msa0377400:intron 15.0%
!!! TTACTTTATTTTTGAAGTTT+CGG + chr3_1:77852935-77852954 Msa0377400:intron 15.0%
!! TATTACATATATATAATTGC+AGG + chr3_1:77853675-77853694 Msa0377400:three_prime_UTR 15.0%
!! AGTTTATGAACAATATAATA+AGG + chr3_1:77853940-77853959 Msa0377400:three_prime_UTR 15.0%
!! GTTTATGAACAATATAATAA+GGG + chr3_1:77853941-77853960 Msa0377400:three_prime_UTR 15.0%
!! TAAAGTAATTATCATAATAC+AGG - chr3_1:77854248-77854267 None:intergenic 15.0%
!! GTGAGAAATAAGAAAATAAA+GGG - chr3_1:77843183-77843202 None:intergenic 20.0%
!!! GAGAATTTGTGAATATTTTT+AGG + chr3_1:77843504-77843523 Msa0377400:intron 20.0%
!!! TATTTTTAGGGTTTTAGAAT+TGG + chr3_1:77843517-77843536 Msa0377400:intron 20.0%
!!! ATTTTTAGGGTTTTAGAATT+GGG + chr3_1:77843518-77843537 Msa0377400:intron 20.0%
!! ATATGAACAAATTAACAATG+TGG + chr3_1:77843645-77843664 Msa0377400:intron 20.0%
!! ATTGAAGTATACCTAATAAT+CGG - chr3_1:77844011-77844030 None:intergenic 20.0%
!! TGTTTATAAATTATAAGGCT+TGG - chr3_1:77844314-77844333 None:intergenic 20.0%
!! GGTAGTGTTTATAAATTATA+AGG - chr3_1:77844319-77844338 None:intergenic 20.0%
!! TGTTTATAACTTATAACACT+TGG - chr3_1:77844405-77844424 None:intergenic 20.0%
!! TAATAACTACAGAAGTAATA+AGG + chr3_1:77844726-77844745 Msa0377400:intron 20.0%
!!! CTAAATTTTGTGATCTAATA+AGG - chr3_1:77844791-77844810 None:intergenic 20.0%
!!! GACATAAAATAAGTTTTAAG+TGG + chr3_1:77845113-77845132 Msa0377400:intron 20.0%
!! GTTCTATCATAAATCATATT+TGG - chr3_1:77845261-77845280 None:intergenic 20.0%
!!! GAGCTAATTTTATAACTTTT+TGG + chr3_1:77845588-77845607 Msa0377400:intron 20.0%
!! TTCAATTGAGTTAGAATTTA+TGG + chr3_1:77845828-77845847 Msa0377400:intron 20.0%
!!! TTTTAAATAGTTTAACGCTT+TGG + chr3_1:77845871-77845890 Msa0377400:intron 20.0%
!! AAGGAATTAAAGACTAAATA+AGG + chr3_1:77846156-77846175 Msa0377400:intron 20.0%
!! TAATAAAAATAGGGTGAAAT+GGG - chr3_1:77846260-77846279 None:intergenic 20.0%
!!! TAATAAGATTATTTTAGCGA+CGG - chr3_1:77846287-77846306 None:intergenic 20.0%
!! TTCTATAATCAATGTTATGA+GGG - chr3_1:77846410-77846429 None:intergenic 20.0%
!! ATTCTATAATCAATGTTATG+AGG - chr3_1:77846411-77846430 None:intergenic 20.0%
!!! CATTTAAAACAAGTAAGTTT+TGG - chr3_1:77846507-77846526 None:intergenic 20.0%
!! CACTACACTAAAAATAATTA+AGG - chr3_1:77846714-77846733 None:intergenic 20.0%
!! TTATTAGATTAATCTAACGA+TGG + chr3_1:77846765-77846784 Msa0377400:intron 20.0%
!! ACTATATTATCTACTTCAAT+TGG - chr3_1:77847160-77847179 None:intergenic 20.0%
!!! TGACAGGTTTAATTTTAAAA+GGG - chr3_1:77847210-77847229 None:intergenic 20.0%
!!! AGAATAAAATTTTAAGTGAC+AGG - chr3_1:77847226-77847245 None:intergenic 20.0%
!! TTCATAAATGTTTCACTATT+AGG - chr3_1:77848520-77848539 None:intergenic 20.0%
!! TAATTGATTAAAGTCAAAGA+GGG - chr3_1:77848639-77848658 None:intergenic 20.0%
!! TTAATTGATTAAAGTCAAAG+AGG - chr3_1:77848640-77848659 None:intergenic 20.0%
!! TAAAATCAATCAAGGAATAA+AGG - chr3_1:77848666-77848685 None:intergenic 20.0%
!!! ATAACAAATCTTGATGATTA+AGG - chr3_1:77848975-77848994 None:intergenic 20.0%
!! GTATTATAAATAGAAGGTTT+AGG + chr3_1:77851485-77851504 Msa0377400:intron 20.0%
!! TATTAAGGACATAATTCTAT+AGG + chr3_1:77851640-77851659 Msa0377400:intron 20.0%
!! TCAATAAGTATGGAAATTTA+AGG - chr3_1:77852390-77852409 None:intergenic 20.0%
!! CATAAATAACTCAATAAGTA+TGG - chr3_1:77852400-77852419 None:intergenic 20.0%
!! CAAAACATAATATAAGAAAG+TGG - chr3_1:77853430-77853449 None:intergenic 20.0%
!! TATGTCATATCTATTTATTG+GGG - chr3_1:77853483-77853502 None:intergenic 20.0%
!! GTATGTCATATCTATTTATT+GGG - chr3_1:77853484-77853503 None:intergenic 20.0%
!!! AGATTTCAAATTTTGTATCT+TGG - chr3_1:77853807-77853826 None:intergenic 20.0%
!!! AAGATACAAAATTTGAAATC+TGG + chr3_1:77853806-77853825 Msa0377400:three_prime_UTR 20.0%
!! ACATATATAGTTTAATGTCT+TGG - chr3_1:77853912-77853931 None:intergenic 20.0%
!! GAATATTATGATGATATATG+TGG + chr3_1:77854339-77854358 Msa0377400:three_prime_UTR 20.0%
! AAAATAAAGGGATGTAATCT+GGG - chr3_1:77843171-77843190 None:intergenic 25.0%
! CGTGAGAAATAAGAAAATAA+AGG - chr3_1:77843184-77843203 None:intergenic 25.0%
! ATTTAAAGAATCAGCGATAA+TGG - chr3_1:77843316-77843335 None:intergenic 25.0%
! TGAGAAATTAAAGAATCAGT+TGG - chr3_1:77843448-77843467 None:intergenic 25.0%
!!! TTTTTAGGGTTTTAGAATTG+GGG + chr3_1:77843519-77843538 Msa0377400:intron 25.0%
! GTTCATATGCTAAACTTTAA+AGG - chr3_1:77843633-77843652 None:intergenic 25.0%
! TTCAAATTACATTACACTAG+AGG - chr3_1:77843720-77843739 None:intergenic 25.0%
!! AGTCCTGTGATATATTATTT+TGG + chr3_1:77843749-77843768 Msa0377400:intron 25.0%
!! GTCCTGTGATATATTATTTT+GGG + chr3_1:77843750-77843769 Msa0377400:intron 25.0%
! TGCATAATATATTCACCAAA+AGG - chr3_1:77843910-77843929 None:intergenic 25.0%
!!! CTTAGAAGCATATTTTAGTA+TGG + chr3_1:77844210-77844229 Msa0377400:intron 25.0%
!!! TTGAAAAGTTCTAAATCAGT+TGG - chr3_1:77844446-77844465 None:intergenic 25.0%
! AAGTATAACAGACCTATTAT+AGG + chr3_1:77844601-77844620 Msa0377400:intron 25.0%
! ATCCTATATAATTGGTAAGT+AGG + chr3_1:77844668-77844687 Msa0377400:intron 25.0%
! ACTTCTGTAGTTATTAAACT+CGG - chr3_1:77844722-77844741 None:intergenic 25.0%
! AGTAATAAGGATACTTGATA+TGG + chr3_1:77844739-77844758 Msa0377400:intron 25.0%
! TAAATTAAGCAATCTTGAGT+AGG + chr3_1:77844862-77844881 Msa0377400:intron 25.0%
!! AATATTTTGCATTAGATGTG+TGG + chr3_1:77845044-77845063 Msa0377400:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr3_1:77845204-77845223 None:intergenic 25.0%
! TTTATCTCACTAAATGAGAA+CGG - chr3_1:77845310-77845329 None:intergenic 25.0%
! CCATAATAAATTGAACTCAT+CGG + chr3_1:77845407-77845426 Msa0377400:intron 25.0%
!! AATGATGATGTTATCTTTGT+TGG - chr3_1:77845644-77845663 None:intergenic 25.0%
! AAATTTAAACACCTAACTAG+AGG + chr3_1:77845756-77845775 Msa0377400:intron 25.0%
! AATTTAAACACCTAACTAGA+GGG + chr3_1:77845757-77845776 Msa0377400:intron 25.0%
!! TTACTGGTAATTTTCATTCA+TGG - chr3_1:77846137-77846156 None:intergenic 25.0%
! TGAATGAAAATTACCAGTAA+AGG + chr3_1:77846137-77846156 Msa0377400:intron 25.0%
!! TTAGTCTTTAATTCCTTTAC+TGG - chr3_1:77846153-77846172 None:intergenic 25.0%
! CTAATAAAAATAGGGTGAAA+TGG - chr3_1:77846261-77846280 None:intergenic 25.0%
! GACGGAAACTAATAAAAATA+GGG - chr3_1:77846269-77846288 None:intergenic 25.0%
! ATGCTTAACTAATATTCTTG+TGG + chr3_1:77846524-77846543 Msa0377400:intron 25.0%
!!! AGTGTTACACTTTTAAAACA+TGG - chr3_1:77846566-77846585 None:intergenic 25.0%
! ATTAAGGAACAAATTAACGT+TGG - chr3_1:77846698-77846717 None:intergenic 25.0%
! AAACAATCCAATGATTCATT+TGG + chr3_1:77846824-77846843 Msa0377400:intron 25.0%
! AAAGTCAAATACATAGCTAA+AGG - chr3_1:77847062-77847081 None:intergenic 25.0%
! AAGTAGATAATATAGTCACA+AGG + chr3_1:77847164-77847183 Msa0377400:intron 25.0%
!!! GTGACAGGTTTAATTTTAAA+AGG - chr3_1:77847211-77847230 None:intergenic 25.0%
!!! TTATTCTCAAGTTGAAAACT+TGG + chr3_1:77847239-77847258 Msa0377400:intron 25.0%
!!! TTTAAGGGTACTAAAGTATT+AGG - chr3_1:77847621-77847640 None:intergenic 25.0%
!! GACTTTGTTTACAATTTGTA+TGG + chr3_1:77847650-77847669 Msa0377400:intron 25.0%
! TACAGTTGTTGAAAAGAAAA+AGG - chr3_1:77848377-77848396 None:intergenic 25.0%
! TCATTCTAAGTGAAACAAAA+AGG - chr3_1:77848466-77848485 None:intergenic 25.0%
!! CATTTGAAGTACAAAACATT+AGG - chr3_1:77848587-77848606 None:intergenic 25.0%
! ACAATGACTAAAATCAATCA+AGG - chr3_1:77848674-77848693 None:intergenic 25.0%
!! TTTTAGTCATTGTACTTTAC+TGG + chr3_1:77848681-77848700 Msa0377400:intron 25.0%
! TTTAGTCATTGTACTTTACT+GGG + chr3_1:77848682-77848701 Msa0377400:intron 25.0%
! TCATTTGGATCATGAAAATT+TGG + chr3_1:77848739-77848758 Msa0377400:intron 25.0%
! CATTTGGATCATGAAAATTT+GGG + chr3_1:77848740-77848759 Msa0377400:intron 25.0%
! TTAAAAAGAGTTCAGAATGT+TGG - chr3_1:77848809-77848828 None:intergenic 25.0%
!!! ATGGACTTTGATTAATTTGT+TGG - chr3_1:77848947-77848966 None:intergenic 25.0%
!! CTTGATGATTAAGGAATTAA+TGG - chr3_1:77848966-77848985 None:intergenic 25.0%
! TTGTATTTGTGCTTAAGATT+TGG + chr3_1:77849398-77849417 Msa0377400:intron 25.0%
! TTGTTGAAAGATTATGACTT+TGG + chr3_1:77849529-77849548 Msa0377400:intron 25.0%
!!! CTTTGGTTTGAATTATCATT+CGG + chr3_1:77849546-77849565 Msa0377400:intron 25.0%
!!! TTTGGTTTGAATTATCATTC+GGG + chr3_1:77849547-77849566 Msa0377400:intron 25.0%
! ATAGGAAAACTAACATTGAT+CGG - chr3_1:77850216-77850235 None:intergenic 25.0%
! TTATAAGTGAACTCTATCAA+CGG - chr3_1:77850495-77850514 None:intergenic 25.0%
! TTATGATTCATAAAGTTGAG+TGG + chr3_1:77851291-77851310 Msa0377400:intron 25.0%
!! AGCATGATTAAGTTAAGTTT+TGG + chr3_1:77851671-77851690 Msa0377400:intron 25.0%
! ATCATCTTGAGTAATATCTA+AGG - chr3_1:77851781-77851800 None:intergenic 25.0%
! GATGATAATTAGATGCTATT+TGG + chr3_1:77851795-77851814 Msa0377400:intron 25.0%
! ATATGTTTATCCATCAATAG+AGG - chr3_1:77852291-77852310 None:intergenic 25.0%
! AGTGATTGATAGAATAAATG+AGG + chr3_1:77852520-77852539 Msa0377400:exon 25.0%
! ATAGAATAAATGAGGATTGT+TGG + chr3_1:77852528-77852547 Msa0377400:exon 25.0%
! AGACTTGAATAAATTGGAAA+CGG - chr3_1:77852586-77852605 None:intergenic 25.0%
! AAATTATAAGCAAAGCCAAA+AGG - chr3_1:77852678-77852697 None:intergenic 25.0%
!!! TTTTGGCTTTGCTTATAATT+TGG + chr3_1:77852677-77852696 Msa0377400:intron 25.0%
!!! TTTGGCTTTGCTTATAATTT+GGG + chr3_1:77852678-77852697 Msa0377400:intron 25.0%
! TTATTGGGATTTGAATTACT+AGG + chr3_1:77852724-77852743 Msa0377400:intron 25.0%
! GGTATTCTAAATTTATGTTG+TGG + chr3_1:77852891-77852910 Msa0377400:intron 25.0%
! GGTATGTCATATCTATTTAT+TGG - chr3_1:77853485-77853504 None:intergenic 25.0%
! TATATAGTTTAATGTCTTGG+AGG - chr3_1:77853909-77853928 None:intergenic 25.0%
GAAAATAAAGGGATGTAATC+TGG - chr3_1:77843172-77843191 None:intergenic 30.0%
GATTTGAAGAAGATAGTTGA+AGG - chr3_1:77843383-77843402 None:intergenic 30.0%
TTTCTCATTCATTCTCCAAT+TGG + chr3_1:77843461-77843480 Msa0377400:intron 30.0%
!! ATTCTCCAATTGGTTGTTTT+AGG + chr3_1:77843471-77843490 Msa0377400:intron 30.0%
!! TTCTCCAATTGGTTGTTTTA+GGG + chr3_1:77843472-77843491 Msa0377400:intron 30.0%
TAAACCCTAAAACAACCAAT+TGG - chr3_1:77843479-77843498 None:intergenic 30.0%
GACCCAAAATAATATATCAC+AGG - chr3_1:77843755-77843774 None:intergenic 30.0%
GCATGAGAATAGAAAAAAGT+GGG + chr3_1:77843944-77843963 Msa0377400:five_prime_UTR 30.0%
CTGCTGTAAATGAAAAGAAA+GGG - chr3_1:77844040-77844059 None:intergenic 30.0%
ACTGCTGTAAATGAAAAGAA+AGG - chr3_1:77844041-77844060 None:intergenic 30.0%
TAATGATGTCATAGACTCAT+AGG + chr3_1:77844079-77844098 Msa0377400:intron 30.0%
TGGACAATCTTCATATAAGT+TGG - chr3_1:77844385-77844404 None:intergenic 30.0%
! ATGTTTAAGATGTCCAGTTT+GGG - chr3_1:77844549-77844568 None:intergenic 30.0%
! TATGTTTAAGATGTCCAGTT+TGG - chr3_1:77844550-77844569 None:intergenic 30.0%
CATCTTAAACATAATGTGAG+TGG + chr3_1:77844557-77844576 Msa0377400:intron 30.0%
ATAGGTCTGTTATACTTACT+GGG - chr3_1:77844598-77844617 None:intergenic 30.0%
AATAGGTCTGTTATACTTAC+TGG - chr3_1:77844599-77844618 None:intergenic 30.0%
AGGATATCAAAGCCTATAAT+AGG - chr3_1:77844616-77844635 None:intergenic 30.0%
GCATGCATATCCTATATAAT+TGG + chr3_1:77844660-77844679 Msa0377400:intron 30.0%
GTCCTACTTACCAATTATAT+AGG - chr3_1:77844673-77844692 None:intergenic 30.0%
CAATATAGTTTCAGCAAACA+AGG - chr3_1:77845006-77845025 None:intergenic 30.0%
CTGAAACTATATTGTTGTGT+TGG + chr3_1:77845012-77845031 Msa0377400:intron 30.0%
! ATAAAGAAAGTAGACCGTTT+TGG + chr3_1:77845366-77845385 Msa0377400:intron 30.0%
! TAAAGAAAGTAGACCGTTTT+GGG + chr3_1:77845367-77845386 Msa0377400:intron 30.0%
CCGATGAGTTCAATTTATTA+TGG - chr3_1:77845410-77845429 None:intergenic 30.0%
! ATAGTTTAACGCTTTGGATA+AGG + chr3_1:77845877-77845896 Msa0377400:intron 30.0%
TCGAGTACAAAAATTTACTG+AGG - chr3_1:77845916-77845935 None:intergenic 30.0%
ACCACATCAAGATAAAGTTT+AGG - chr3_1:77846019-77846038 None:intergenic 30.0%
CGACGGAAACTAATAAAAAT+AGG - chr3_1:77846270-77846289 None:intergenic 30.0%
TCTTATTACACACAATCTAC+TGG + chr3_1:77846299-77846318 Msa0377400:intron 30.0%
CTTAATAGTAGGGAATTTCA+TGG - chr3_1:77846613-77846632 None:intergenic 30.0%
TGTTTGTGTGCTTAATAGTA+GGG - chr3_1:77846623-77846642 None:intergenic 30.0%
ATGTTTGTGTGCTTAATAGT+AGG - chr3_1:77846624-77846643 None:intergenic 30.0%
CGAGACTTAAAGAAAGAAAA+AGG - chr3_1:77846744-77846763 None:intergenic 30.0%
TAATCATGTAACTTCGTTCA+TGG - chr3_1:77846803-77846822 None:intergenic 30.0%
AAAGCTACCAAATGAATCAT+TGG - chr3_1:77846834-77846853 None:intergenic 30.0%
TAGTTTGATCCATCAAAAAG+TGG + chr3_1:77847017-77847036 Msa0377400:intron 30.0%
AAGTGTTAGAGAAAAGATTC+AGG - chr3_1:77847099-77847118 None:intergenic 30.0%
AGATAATATAGTCACAAGGA+AGG + chr3_1:77847168-77847187 Msa0377400:intron 30.0%
GATAATATAGTCACAAGGAA+GGG + chr3_1:77847169-77847188 Msa0377400:intron 30.0%
ATAATATAGTCACAAGGAAG+GGG + chr3_1:77847170-77847189 Msa0377400:intron 30.0%
!! AAAGTCTCATCTAGCTTTAA+GGG - chr3_1:77847636-77847655 None:intergenic 30.0%
CAATTTGTATGGAGTTTGTA+TGG + chr3_1:77847661-77847680 Msa0377400:intron 30.0%
GAATGATATAGATCAGACAA+AGG + chr3_1:77847689-77847708 Msa0377400:intron 30.0%
! TTTTCTTGTATGCTTTGCAA+AGG + chr3_1:77847835-77847854 Msa0377400:intron 30.0%
! ATTTTCTTTGCAATCTGTCT+TGG + chr3_1:77848214-77848233 Msa0377400:intron 30.0%
AACAAGATTTCGACACATAA+GGG - chr3_1:77848324-77848343 None:intergenic 30.0%
! ATCAGATTTGATCTTGCTTT+TGG + chr3_1:77848346-77848365 Msa0377400:intron 30.0%
! TCCTTTGATTCTTTGTTTCT+TGG + chr3_1:77848865-77848884 Msa0377400:intron 30.0%
ACCAAGAAACAAAGAATCAA+AGG - chr3_1:77848869-77848888 None:intergenic 30.0%
AGTTATCTAAGTGTGAATTC+TGG + chr3_1:77849038-77849057 Msa0377400:intron 30.0%
TACCATTGTCAGAAATAACA+TGG - chr3_1:77849087-77849106 None:intergenic 30.0%
TATTACCGCAGATTTATTGA+AGG + chr3_1:77849199-77849218 Msa0377400:intron 30.0%
GAAATCCTTCAATAAATCTG+CGG - chr3_1:77849207-77849226 None:intergenic 30.0%
TATTGAAGGATTTCCTAAGT+TGG + chr3_1:77849213-77849232 Msa0377400:intron 30.0%
CTAATTCAAGATCATGAGTA+GGG - chr3_1:77849372-77849391 None:intergenic 30.0%
ATTTGGAGACATTACTTGTA+TGG + chr3_1:77849415-77849434 Msa0377400:intron 30.0%
TTTGATCAGACAAATACTTC+AGG - chr3_1:77849474-77849493 None:intergenic 30.0%
ATGTAAAGTCTTCCTACTTA+AGG - chr3_1:77849596-77849615 None:intergenic 30.0%
AAACTCTTTAACCATCATAG+CGG - chr3_1:77849623-77849642 None:intergenic 30.0%
AACTGAAGATAATGACTTCA+AGG + chr3_1:77849804-77849823 Msa0377400:intron 30.0%
TTCTTTATCTCATCATTGTC+TGG - chr3_1:77849874-77849893 None:intergenic 30.0%
! ATGACTTGAAGAAGTTGTTT+TGG + chr3_1:77849959-77849978 Msa0377400:intron 30.0%
CAAAATCTCGAAGTAAATCT+TGG - chr3_1:77850318-77850337 None:intergenic 30.0%
! CAAGATTTACTTCGAGATTT+TGG + chr3_1:77850316-77850335 Msa0377400:intron 30.0%
AACAGCTATCATTCAAGTAT+TGG + chr3_1:77850516-77850535 Msa0377400:intron 30.0%
ACAGCTATCATTCAAGTATT+GGG + chr3_1:77850517-77850536 Msa0377400:intron 30.0%
TGATAAGGACCAATAAACTT+CGG - chr3_1:77850819-77850838 None:intergenic 30.0%
ATTCTCTCAGATATCTGATA+AGG - chr3_1:77850834-77850853 None:intergenic 30.0%
TATCAGATATCTGAGAGAAT+TGG + chr3_1:77850834-77850853 Msa0377400:intron 30.0%
AGGACGAAAATTCTATAAGT+TGG + chr3_1:77851173-77851192 Msa0377400:intron 30.0%
GGACGAAAATTCTATAAGTT+GGG + chr3_1:77851174-77851193 Msa0377400:intron 30.0%
GACGAAAATTCTATAAGTTG+GGG + chr3_1:77851175-77851194 Msa0377400:intron 30.0%
!! TGAAACGTTTTTGGAGAAAA+AGG + chr3_1:77851534-77851553 Msa0377400:intron 30.0%
!! GAAACGTTTTTGGAGAAAAA+GGG + chr3_1:77851535-77851554 Msa0377400:intron 30.0%
TTTGGTGAGAATTGAGAATT+AGG + chr3_1:77851689-77851708 Msa0377400:intron 30.0%
GATGAAAGAATCATGAAGTT+AGG + chr3_1:77851817-77851836 Msa0377400:intron 30.0%
! GGTGAAAAGTTGTGATTTTT+AGG + chr3_1:77851838-77851857 Msa0377400:intron 30.0%
!!! AGTTGTGATTTTTAGGTTTC+TGG + chr3_1:77851845-77851864 Msa0377400:intron 30.0%
!!! TTCGTGTTTTTTTCACCTTT+TGG + chr3_1:77852660-77852679 Msa0377400:intron 30.0%
!! TTGGCTTTGCTTATAATTTG+GGG + chr3_1:77852679-77852698 Msa0377400:intron 30.0%
ATAAGCGTCAATTTCTCAAT+CGG + chr3_1:77852870-77852889 Msa0377400:CDS 30.0%
!!! TTTTGAAGTTTCGGTTGTAA+TGG + chr3_1:77852944-77852963 Msa0377400:intron 30.0%
!!! TAATGGTTGTTTTAGGTTGT+TGG + chr3_1:77852961-77852980 Msa0377400:intron 30.0%
TCTTAGCCTCAAATAACAAA+GGG - chr3_1:77853066-77853085 None:intergenic 30.0%
ATCTTAGCCTCAAATAACAA+AGG - chr3_1:77853067-77853086 None:intergenic 30.0%
! TGAACAATTTCAGAACGTTT+TGG + chr3_1:77853276-77853295 Msa0377400:CDS 30.0%
!!! AATTTCAGAACGTTTTGGTT+CGG + chr3_1:77853281-77853300 Msa0377400:CDS 30.0%
AGTTCTTGAAACTTGATCTA+TGG - chr3_1:77853506-77853525 None:intergenic 30.0%
!!! ACTTTCACGTTTTGAAGTAT+AGG + chr3_1:77853523-77853542 Msa0377400:three_prime_UTR 30.0%
AGAAAATCAGACTCAAACAA+GGG - chr3_1:77853573-77853592 None:intergenic 30.0%
AAGAAAATCAGACTCAAACA+AGG - chr3_1:77853574-77853593 None:intergenic 30.0%
! TTAATCATTTTCCCAACCAA+CGG - chr3_1:77853608-77853627 None:intergenic 30.0%
! TCATTTTGTCGTAAAGACTT+CGG + chr3_1:77853633-77853652 Msa0377400:three_prime_UTR 30.0%
! CAAATTTTGTATCTTGGAGT+TGG - chr3_1:77853801-77853820 None:intergenic 30.0%
ATTGTGAAAGAAATACACAC+TGG - chr3_1:77853985-77854004 None:intergenic 30.0%
CTGCTTAGTAAAATCATCAA+GGG - chr3_1:77854055-77854074 None:intergenic 30.0%
TCTGCTTAGTAAAATCATCA+AGG - chr3_1:77854056-77854075 None:intergenic 30.0%
! TGATTTTACTAAGCAGATTC+TGG + chr3_1:77854059-77854078 Msa0377400:three_prime_UTR 30.0%
! GATTTTACTAAGCAGATTCT+GGG + chr3_1:77854060-77854079 Msa0377400:three_prime_UTR 30.0%
TAATACTCAAGAAGAGTTGA+AGG + chr3_1:77854177-77854196 Msa0377400:three_prime_UTR 30.0%
!!! ATTTGCAAGGATTTTGAGTT+AGG + chr3_1:77854200-77854219 Msa0377400:three_prime_UTR 30.0%
!! AGAATCAGCGATAATGGATT+TGG - chr3_1:77843310-77843329 None:intergenic 35.0%
GCGATTTGAAGAAAAATCAG+AGG - chr3_1:77843346-77843365 None:intergenic 35.0%
! GGATTGAGAATTGCTGTTAA+GGG + chr3_1:77843547-77843566 Msa0377400:intron 35.0%
CATTCACAAGTCAAAAACAC+AGG - chr3_1:77843677-77843696 None:intergenic 35.0%
ATATTCACCAAAAGGATGCA+GGG - chr3_1:77843902-77843921 None:intergenic 35.0%
TATATTCACCAAAAGGATGC+AGG - chr3_1:77843903-77843922 None:intergenic 35.0%
GGCATGAGAATAGAAAAAAG+TGG + chr3_1:77843943-77843962 Msa0377400:five_prime_UTR 35.0%
GAGAATAGAAAAAAGTGGGT+TGG + chr3_1:77843948-77843967 Msa0377400:five_prime_UTR 35.0%
TACCTAATAATCGGATCCTT+AGG - chr3_1:77844002-77844021 None:intergenic 35.0%
TAAATGAAAAGAAAGGGAGC+TGG - chr3_1:77844034-77844053 None:intergenic 35.0%
AAAACTGTCCATCATCCTAA+AGG - chr3_1:77844259-77844278 None:intergenic 35.0%
TGGACAGTCTTCATATAAGT+TGG - chr3_1:77844294-77844313 None:intergenic 35.0%
TGATTGTTGAAAACTGTCCA+CGG - chr3_1:77844359-77844378 None:intergenic 35.0%
TCAGATGTTCAATCCTAACT+GGG - chr3_1:77844478-77844497 None:intergenic 35.0%
TTCAGATGTTCAATCCTAAC+TGG - chr3_1:77844479-77844498 None:intergenic 35.0%
AGTTAGGATTGAACATCTGA+AGG + chr3_1:77844478-77844497 Msa0377400:intron 35.0%
ACCAAGTTCACTTGTTCAAA+CGG + chr3_1:77844691-77844710 Msa0377400:intron 35.0%
GATCAAGTTTCTCCCATATA+TGG + chr3_1:77844925-77844944 Msa0377400:intron 35.0%
GAAGCTATGTTGCCATATAT+GGG - chr3_1:77844940-77844959 None:intergenic 35.0%
AGAAGCTATGTTGCCATATA+TGG - chr3_1:77844941-77844960 None:intergenic 35.0%
AAGACTATGATGTTGCATTC+AGG + chr3_1:77845068-77845087 Msa0377400:intron 35.0%
!!! GTTATATTTTTTGCGGTCGT+GGG - chr3_1:77845484-77845503 None:intergenic 35.0%
GCCTAAACTTTATCTTGATG+TGG + chr3_1:77846015-77846034 Msa0377400:intron 35.0%
! AATCAATGTTATGAGGGTAC+TGG - chr3_1:77846404-77846423 None:intergenic 35.0%
AACTAATATTCTTGTGGCAC+TGG + chr3_1:77846530-77846549 Msa0377400:intron 35.0%
TTTCATGGCCAACATAAGTT+GGG - chr3_1:77846598-77846617 None:intergenic 35.0%
ATTTCATGGCCAACATAAGT+TGG - chr3_1:77846599-77846618 None:intergenic 35.0%
AACAAATTAACGTTGGCCAT+TGG - chr3_1:77846691-77846710 None:intergenic 35.0%
!! ATCTTTGATGGTGTCTTCTT+TGG + chr3_1:77846902-77846921 Msa0377400:intron 35.0%
! TCAAACTACTACTTCTGGAA+AGG - chr3_1:77847005-77847024 None:intergenic 35.0%
ATGGATCAAACTACTACTTC+TGG - chr3_1:77847010-77847029 None:intergenic 35.0%
TTTGATCCATCAAAAAGTGG+TGG + chr3_1:77847020-77847039 Msa0377400:intron 35.0%
GTCAAATACATAGCTAAAGG+AGG - chr3_1:77847059-77847078 None:intergenic 35.0%
GTTAGAGAAAAGATTCAGGA+AGG - chr3_1:77847095-77847114 None:intergenic 35.0%
TAATATAGTCACAAGGAAGG+GGG + chr3_1:77847171-77847190 Msa0377400:intron 35.0%
!! CTCAAGTTGAAAACTTGGAA+TGG + chr3_1:77847244-77847263 Msa0377400:intron 35.0%
AGAGTAAAGAGAAGAGAAGA+AGG + chr3_1:77847378-77847397 Msa0377400:intron 35.0%
TTATAGTAGTTCACCCAATG+TGG + chr3_1:77847413-77847432 Msa0377400:intron 35.0%
TATAGTAGTTCACCCAATGT+GGG + chr3_1:77847414-77847433 Msa0377400:intron 35.0%
GAAAATCTCACAAAACTGTG+AGG - chr3_1:77847450-77847469 None:intergenic 35.0%
AGTTATCTCAAGCATCATAG+TGG - chr3_1:77847472-77847491 None:intergenic 35.0%
TACAGGTTGTGTAATTGTTC+AGG - chr3_1:77847526-77847545 None:intergenic 35.0%
AGTAGGTAACTTAGCAAGAA+AGG - chr3_1:77847574-77847593 None:intergenic 35.0%
! GAAAGGTGTAAAGTCTAAGT+AGG - chr3_1:77847591-77847610 None:intergenic 35.0%
!! AAGGGTACTAAAGTATTAGG+TGG - chr3_1:77847618-77847637 None:intergenic 35.0%
!! CAAAGTCTCATCTAGCTTTA+AGG - chr3_1:77847637-77847656 None:intergenic 35.0%
TAGATCAGACAAAGGAGAAA+TGG + chr3_1:77847697-77847716 Msa0377400:intron 35.0%
! TGTACACTTTGAAGACTTCT+TGG + chr3_1:77847760-77847779 Msa0377400:intron 35.0%
!! GAATTCAAGTGTAAGTTGGT+GGG - chr3_1:77847960-77847979 None:intergenic 35.0%
! AGAATTCAAGTGTAAGTTGG+TGG - chr3_1:77847961-77847980 None:intergenic 35.0%
ACCAACTTACACTTGAATTC+TGG + chr3_1:77847960-77847979 Msa0377400:intron 35.0%
CCAACTTACACTTGAATTCT+GGG + chr3_1:77847961-77847980 Msa0377400:intron 35.0%
TGTTCATCATGATCTTCATC+TGG + chr3_1:77848073-77848092 Msa0377400:intron 35.0%
GTTCATCATGATCTTCATCT+GGG + chr3_1:77848074-77848093 Msa0377400:intron 35.0%
TCACTTTCATTCCATGCTTT+AGG + chr3_1:77848268-77848287 Msa0377400:intron 35.0%
CACTTTCATTCCATGCTTTA+GGG + chr3_1:77848269-77848288 Msa0377400:intron 35.0%
ACTTTCATTCCATGCTTTAG+GGG + chr3_1:77848270-77848289 Msa0377400:intron 35.0%
CAACAAGATTTCGACACATA+AGG - chr3_1:77848325-77848344 None:intergenic 35.0%
TGTTCATGTCAGAAAAAGCA+TGG + chr3_1:77848398-77848417 Msa0377400:intron 35.0%
AACATTTATGAAGTGCAGCT+TGG + chr3_1:77848528-77848547 Msa0377400:intron 35.0%
! CATCTAGGATGATATTCTGA+TGG + chr3_1:77848555-77848574 Msa0377400:intron 35.0%
ATCCAAATGAAGAACATGCA+AGG - chr3_1:77848729-77848748 None:intergenic 35.0%
CTTGAGTGGTTAATTAAGAC+AGG - chr3_1:77848909-77848928 None:intergenic 35.0%
!! ATTTAACTTGTGCTCTTGAG+TGG - chr3_1:77848923-77848942 None:intergenic 35.0%
AACTTAGCATATAGCTGTTG+AGG - chr3_1:77849022-77849041 None:intergenic 35.0%
!! GACCATGTTATTTCTGACAA+TGG + chr3_1:77849082-77849101 Msa0377400:intron 35.0%
! TACGGAGATTAGAAGCTTTT+TGG + chr3_1:77849165-77849184 Msa0377400:intron 35.0%
! ACGGAGATTAGAAGCTTTTT+GGG + chr3_1:77849166-77849185 Msa0377400:intron 35.0%
GCTAATTCAAGATCATGAGT+AGG - chr3_1:77849373-77849392 None:intergenic 35.0%
GAGACATTACTTGTATGGTT+CGG + chr3_1:77849420-77849439 Msa0377400:intron 35.0%
AGACATTACTTGTATGGTTC+GGG + chr3_1:77849421-77849440 Msa0377400:intron 35.0%
AATTGAATATGAGACAGCGA+AGG + chr3_1:77849497-77849516 Msa0377400:intron 35.0%
TTTACATATGTCCGCTATGA+TGG + chr3_1:77849609-77849628 Msa0377400:intron 35.0%
! TAGTTTGTGAAATGTCGTCT+CGG + chr3_1:77849674-77849693 Msa0377400:intron 35.0%
GAAAGCTGATGTTAAGTTTG+TGG + chr3_1:77849759-77849778 Msa0377400:intron 35.0%
TGTTAAGTTTGTGGACTTGT+TGG + chr3_1:77849768-77849787 Msa0377400:intron 35.0%
TGATTCTTGAAGAGAGTCAT+AGG + chr3_1:77849896-77849915 Msa0377400:intron 35.0%
GAGTAGCTTAAGTATTCATC+CGG + chr3_1:77849918-77849937 Msa0377400:intron 35.0%
AGTAGCTTAAGTATTCATCC+GGG + chr3_1:77849919-77849938 Msa0377400:intron 35.0%
!!! ACTTGAAGAAGTTGTTTTGG+TGG + chr3_1:77849962-77849981 Msa0377400:intron 35.0%
TTCCATTCTGGTACATCTAA+CGG - chr3_1:77850084-77850103 None:intergenic 35.0%
TAGATGTACCAGAATGGAAA+TGG + chr3_1:77850085-77850104 Msa0377400:intron 35.0%
AGATGTACCAGAATGGAAAT+GGG + chr3_1:77850086-77850105 Msa0377400:intron 35.0%
!! TCATTCCCTTTAGGAGTATT+CGG - chr3_1:77850144-77850163 None:intergenic 35.0%
TAAAGGGAATGACGCTATTT+GGG + chr3_1:77850152-77850171 Msa0377400:intron 35.0%
! TAGTTTTCCTATAGCTCAGT+TGG + chr3_1:77850224-77850243 Msa0377400:intron 35.0%
! CTATCTGAAACAATGCTTGA+AGG - chr3_1:77850291-77850310 None:intergenic 35.0%
AAGAGTTTGCAAGAAGCTTT+AGG + chr3_1:77850339-77850358 Msa0377400:intron 35.0%
! CTCTAAGTTGAGATTGAGTT+CGG + chr3_1:77850362-77850381 Msa0377400:intron 35.0%
!! CTATCATTCAAGTATTGGGA+TGG + chr3_1:77850521-77850540 Msa0377400:intron 35.0%
GTAGTCTGTTGAACAATTTC+AGG - chr3_1:77850627-77850646 None:intergenic 35.0%
! AAGTTGACTCCGAAGTTTAT+TGG + chr3_1:77850807-77850826 Msa0377400:intron 35.0%
TCGTGCAAATTCGATAAATG+CGG - chr3_1:77850888-77850907 None:intergenic 35.0%
ATCATCACTCTGAATCACAT+GGG - chr3_1:77850955-77850974 None:intergenic 35.0%
! TTGCTTGAGGTAAATTTTCG+AGG + chr3_1:77851153-77851172 Msa0377400:intron 35.0%
ATTCTGCTATTACCAGGTAA+AGG + chr3_1:77851598-77851617 Msa0377400:intron 35.0%
! AAATTAGTCTCACCTTTACC+TGG - chr3_1:77851613-77851632 None:intergenic 35.0%
AGCTCTCTTACTTACTTCTA+AGG - chr3_1:77852154-77852173 None:intergenic 35.0%
AGTAAGTAAGAGAGCTGTTT+AGG + chr3_1:77852158-77852177 Msa0377400:intron 35.0%
! CTTTTAATGCTGCATAGTAG+TGG + chr3_1:77852258-77852277 Msa0377400:intron 35.0%
TGGTATAGTACCTCTATTGA+TGG + chr3_1:77852278-77852297 Msa0377400:intron 35.0%
TTAATAGCCGACAAGTTTCA+AGG + chr3_1:77852493-77852512 Msa0377400:five_prime_UTR 35.0%
TAATAGCCGACAAGTTTCAA+GGG + chr3_1:77852494-77852513 Msa0377400:five_prime_UTR 35.0%
GTCGTGAGACTTGAATAAAT+TGG - chr3_1:77852592-77852611 None:intergenic 35.0%
GAGGAAATTCTACTAGACAA+TGG + chr3_1:77852800-77852819 Msa0377400:CDS 35.0%
TTGAGAAATTGACGCTTATC+AGG - chr3_1:77852869-77852888 None:intergenic 35.0%
!! TCGGTTGTAATGGTTGTTTT+AGG + chr3_1:77852954-77852973 Msa0377400:intron 35.0%
TCAACCCACACAACAATTAT+GGG - chr3_1:77853106-77853125 None:intergenic 35.0%
ATCAACCCACACAACAATTA+TGG - chr3_1:77853107-77853126 None:intergenic 35.0%
GATATAGTAATCGACAACAC+TGG + chr3_1:77853235-77853254 Msa0377400:CDS 35.0%
!!! ATTTCAGAACGTTTTGGTTC+GGG + chr3_1:77853282-77853301 Msa0377400:CDS 35.0%
CAAAACTCATACCATGTCAA+GGG - chr3_1:77853316-77853335 None:intergenic 35.0%
! TTCTTTCCTTTTATTGCCGT+TGG + chr3_1:77853589-77853608 Msa0377400:three_prime_UTR 35.0%
!! CGATAATGGATTTGGTGTGT+GGG - chr3_1:77843302-77843321 None:intergenic 40.0%
GTGAGAACTGAGAGAGATAA+TGG - chr3_1:77843405-77843424 None:intergenic 40.0%
TTCTCACTCAGATTAAGCCA+GGG + chr3_1:77843418-77843437 Msa0377400:five_prime_UTR 40.0%
AAGAATCAGTTGGATTACCC+TGG - chr3_1:77843438-77843457 None:intergenic 40.0%
!!! AGGGTTTTAGAATTGGGGAA+TGG + chr3_1:77843524-77843543 Msa0377400:intron 40.0%
!!! GGGTTTTAGAATTGGGGAAT+GGG + chr3_1:77843525-77843544 Msa0377400:intron 40.0%
!!! GGTTTTAGAATTGGGGAATG+GGG + chr3_1:77843526-77843545 Msa0377400:intron 40.0%
! GGGATTGAGAATTGCTGTTA+AGG + chr3_1:77843546-77843565 Msa0377400:intron 40.0%
CCAAATGTTCTGATTCTCAG+AGG - chr3_1:77843877-77843896 None:intergenic 40.0%
! CCTCTGAGAATCAGAACATT+TGG + chr3_1:77843874-77843893 Msa0377400:five_prime_UTR 40.0%
CACCTAAGGATCCGATTATT+AGG + chr3_1:77843997-77844016 Msa0377400:five_prime_UTR 40.0%
TGTCATAGACTCATAGGCAT+TGG + chr3_1:77844085-77844104 Msa0377400:intron 40.0%
! TGCTGTTTGTTGATAGAGAG+TGG + chr3_1:77844141-77844160 Msa0377400:intron 40.0%
TAGAGAGTGGTAACTACTTC+CGG + chr3_1:77844154-77844173 Msa0377400:intron 40.0%
! AAGGACTAAACCTCTGCTTT+TGG - chr3_1:77844240-77844259 None:intergenic 40.0%
AAGCAGAGGTTTAGTCCTTT+AGG + chr3_1:77844241-77844260 Msa0377400:intron 40.0%
!! GGTTTAGTCCTTTAGGATGA+TGG + chr3_1:77844248-77844267 Msa0377400:intron 40.0%
ACGGTTCGATATATGACACT+CGG - chr3_1:77844340-77844359 None:intergenic 40.0%
ATGTTCAATCCTAACTGGGA+GGG - chr3_1:77844474-77844493 None:intergenic 40.0%
TAGGATTGAACATCTGAAGG+TGG + chr3_1:77844481-77844500 Msa0377400:five_prime_UTR 40.0%
!! ATCTGAAGGTGGACTAATTC+TGG + chr3_1:77844492-77844511 Msa0377400:five_prime_UTR 40.0%
GTGAGTGGTATTTACTACCT+TGG + chr3_1:77844572-77844591 Msa0377400:intron 40.0%
ACCGTTTGAACAAGTGAACT+TGG - chr3_1:77844695-77844714 None:intergenic 40.0%
GAGAAAAAGTCAGCCCAAAA+CGG - chr3_1:77845383-77845402 None:intergenic 40.0%
!!! CGTTATATTTTTTGCGGTCG+TGG - chr3_1:77845485-77845504 None:intergenic 40.0%
!!! GGTGGGCGTTATATTTTTTG+CGG - chr3_1:77845491-77845510 None:intergenic 40.0%
AAAAAATATAACGCCCACCG+TGG + chr3_1:77845492-77845511 Msa0377400:intron 40.0%
AAAAATATAACGCCCACCGT+GGG + chr3_1:77845493-77845512 Msa0377400:intron 40.0%
GGCACGTTCAGTTTGTATAT+AGG - chr3_1:77845998-77846017 None:intergenic 40.0%
CATTGAGATGCATGGGAAAT+TGG - chr3_1:77846235-77846254 None:intergenic 40.0%
!! AATGTTATGAGGGTACTGGT+TGG - chr3_1:77846400-77846419 None:intergenic 40.0%
!! ATATTCTTGTGGCACTGGTT+AGG + chr3_1:77846535-77846554 Msa0377400:intron 40.0%
GTCAACTGATGAAAAAGCTC+AGG - chr3_1:77846871-77846890 None:intergenic 40.0%
! CCATCAAAGATAAGAGTGCA+TGG - chr3_1:77846893-77846912 None:intergenic 40.0%
CCATGCACTCTTATCTTTGA+TGG + chr3_1:77846890-77846909 Msa0377400:intron 40.0%
! ATGGTGTCTTCTTTGGTCTT+TGG + chr3_1:77846909-77846928 Msa0377400:intron 40.0%
ATGTGGTCAGTAATCACAGA+TGG - chr3_1:77846945-77846964 None:intergenic 40.0%
GATCTCAAGACAATGACATG+TGG - chr3_1:77846962-77846981 None:intergenic 40.0%
!!! AACAGACCACCACTTTTTGA+TGG - chr3_1:77847029-77847048 None:intergenic 40.0%
AGTGTTCAAACCCTTAGAAC+CGG + chr3_1:77847124-77847143 Msa0377400:intron 40.0%
TTCAATTGGCATCAAGATCC+CGG - chr3_1:77847146-77847165 None:intergenic 40.0%
AATATAGTCACAAGGAAGGG+GGG + chr3_1:77847172-77847191 Msa0377400:intron 40.0%
TTCAGGTGAACAGAGTTGTA+CGG - chr3_1:77847509-77847528 None:intergenic 40.0%
AAGTATTAGGTGGAGCAGAA+AGG - chr3_1:77847608-77847627 None:intergenic 40.0%
ATCAGACAAAGGAGAAATGG+AGG + chr3_1:77847700-77847719 Msa0377400:intron 40.0%
CCCAGAATTCAAGTGTAAGT+TGG - chr3_1:77847964-77847983 None:intergenic 40.0%
TACGACTTCAGAATGTTCCT+GGG + chr3_1:77848187-77848206 Msa0377400:intron 40.0%
TTGCAAAGAAAATCTGACCC+AGG - chr3_1:77848207-77848226 None:intergenic 40.0%
AAGTGCAGGATCTCATAAAG+TGG + chr3_1:77848240-77848259 Msa0377400:intron 40.0%
!! ATTCCATGCTTTAGGGGATT+TGG + chr3_1:77848276-77848295 Msa0377400:intron 40.0%
AAACCAAATCCCCTAAAGCA+TGG - chr3_1:77848282-77848301 None:intergenic 40.0%
ATTTCGACACATAAGGGAGT+TGG - chr3_1:77848318-77848337 None:intergenic 40.0%
TGATCGAACTTTCTGAACTC+AGG + chr3_1:77848425-77848444 Msa0377400:intron 40.0%
GATCGAACTTTCTGAACTCA+GGG + chr3_1:77848426-77848445 Msa0377400:intron 40.0%
ATCGAACTTTCTGAACTCAG+GGG + chr3_1:77848427-77848446 Msa0377400:intron 40.0%
GACCTTGCATGTTCTTCATT+TGG + chr3_1:77848724-77848743 Msa0377400:intron 40.0%
GGATCATGAAAATTTGGGCT+TGG + chr3_1:77848745-77848764 Msa0377400:intron 40.0%
AATGTTGGACAGAGTTCAGA+AGG - chr3_1:77848794-77848813 None:intergenic 40.0%
! AGATCCGTCTAAAGTTGAAG+CGG + chr3_1:77849114-77849133 Msa0377400:intron 40.0%
! CGGAGATTAGAAGCTTTTTG+GGG + chr3_1:77849167-77849186 Msa0377400:intron 40.0%
!! GTTAACAGAAGTGCCAACTT+AGG - chr3_1:77849229-77849248 None:intergenic 40.0%
TATTGTGATGCGTCCAAGTT+GGG + chr3_1:77849268-77849287 Msa0377400:intron 40.0%
GCTTATGCAAGATGGTAAAG+TGG + chr3_1:77849303-77849322 Msa0377400:intron 40.0%
TCTCAACTGTCTTGATGCAT+AGG - chr3_1:77849332-77849351 None:intergenic 40.0%
TTGTTGCAGATGCCTTAAGT+AGG + chr3_1:77849581-77849600 Msa0377400:intron 40.0%
GACTTCAAGGTAGATGATCA+AGG + chr3_1:77849817-77849836 Msa0377400:intron 40.0%
TGATACATCTTTGTAGCTCC+CGG - chr3_1:77849940-77849959 None:intergenic 40.0%
!!! AAGAAGTTGTTTTGGTGGTC+TGG + chr3_1:77849967-77849986 Msa0377400:intron 40.0%
! TCTGATTTGTCAGAAGTCGA+AGG + chr3_1:77850026-77850045 Msa0377400:intron 40.0%
ATGCTATCCCATTTCCATTC+TGG - chr3_1:77850096-77850115 None:intergenic 40.0%
GAAATGGGATAGCATATCCA+TGG + chr3_1:77850101-77850120 Msa0377400:intron 40.0%
CAAACTCGTCACAAAATCCA+TGG - chr3_1:77850121-77850140 None:intergenic 40.0%
AGTTTGCCGAATACTCCTAA+AGG + chr3_1:77850135-77850154 Msa0377400:intron 40.0%
GTTTGCCGAATACTCCTAAA+GGG + chr3_1:77850136-77850155 Msa0377400:intron 40.0%
CAAATAGCGTCATTCCCTTT+AGG - chr3_1:77850153-77850172 None:intergenic 40.0%
CTAAAGGGAATGACGCTATT+TGG + chr3_1:77850151-77850170 Msa0377400:intron 40.0%
TGTCGATAGATTGACGAAGT+CGG + chr3_1:77850179-77850198 Msa0377400:intron 40.0%
! TTTTCCTATAGCTCAGTTGG+CGG + chr3_1:77850227-77850246 Msa0377400:intron 40.0%
CGAGATATTGTGAAGTTGCA+TGG + chr3_1:77850261-77850280 Msa0377400:intron 40.0%
AGAGTATGTGTACTTGAGCA+AGG + chr3_1:77850447-77850466 Msa0377400:intron 40.0%
TGTTCAACAGACTACTGAGA+AGG + chr3_1:77850632-77850651 Msa0377400:intron 40.0%
GGTCTTTCTTACGCTTATCA+TGG - chr3_1:77850710-77850729 None:intergenic 40.0%
AAAGACCTTGAGTTCCAAGA+GGG + chr3_1:77850723-77850742 Msa0377400:intron 40.0%
GAGTAACTCTCAAGAACACA+TGG - chr3_1:77850752-77850771 None:intergenic 40.0%
GATATCTGAGAGAATTGGCA+CGG + chr3_1:77850839-77850858 Msa0377400:intron 40.0%
TGCAAATTCGATAAATGCGG+TGG - chr3_1:77850885-77850904 None:intergenic 40.0%
CATCATCACTCTGAATCACA+TGG - chr3_1:77850956-77850975 None:intergenic 40.0%
! AGAGTGATGATGTGCAAGTT+AGG + chr3_1:77850964-77850983 Msa0377400:intron 40.0%
! GAGTGATGATGTGCAAGTTA+GGG + chr3_1:77850965-77850984 Msa0377400:intron 40.0%
! CTCTCAACGTCTTCATTTTG+CGG - chr3_1:77851031-77851050 None:intergenic 40.0%
TACCTCTAGTGAGAGTTGTT+TGG + chr3_1:77851060-77851079 Msa0377400:intron 40.0%
GGAACTAGAGAGTAAGATGA+AGG + chr3_1:77851112-77851131 Msa0377400:intron 40.0%
TACCTCAAGCAAACAACTCT+GGG - chr3_1:77851145-77851164 None:intergenic 40.0%
TTACCTCAAGCAAACAACTC+TGG - chr3_1:77851146-77851165 None:intergenic 40.0%
TGTGAGGAGAGTAAGTTAAG+TGG + chr3_1:77851445-77851464 Msa0377400:intron 40.0%
! CAACGTACGTGAAACGTTTT+TGG + chr3_1:77851525-77851544 Msa0377400:intron 40.0%
TCAGAAAGAGAGAAGAACCA+AGG + chr3_1:77851565-77851584 Msa0377400:intron 40.0%
CAGAAAGAGAGAAGAACCAA+GGG + chr3_1:77851566-77851585 Msa0377400:intron 40.0%
! GATTGCATCGGGACAATTTT+GGG - chr3_1:77852104-77852123 None:intergenic 40.0%
! TAAGCTCCAGAAGTTTGTTC+AGG + chr3_1:77852190-77852209 Msa0377400:intron 40.0%
TGAGTTTGTCTCACTTACCT+GGG - chr3_1:77852470-77852489 None:intergenic 40.0%
TACTAGGATGCGTTGAAGAA+AGG + chr3_1:77852740-77852759 Msa0377400:intron 40.0%
ACTAGGATGCGTTGAAGAAA+GGG + chr3_1:77852741-77852760 Msa0377400:intron 40.0%
AAAAAAGTTGTTGCCGCGTT+TGG + chr3_1:77852776-77852795 Msa0377400:CDS 40.0%
AAAAAGTTGTTGCCGCGTTT+GGG + chr3_1:77852777-77852796 Msa0377400:CDS 40.0%
! AAAACGATTTGGCCAAGTCT+GGG - chr3_1:77852839-77852858 None:intergenic 40.0%
! AAAAACGATTTGGCCAAGTC+TGG - chr3_1:77852840-77852859 None:intergenic 40.0%
CAGGATCAGCAAAAACGATT+TGG - chr3_1:77852850-77852869 None:intergenic 40.0%
! GTTGGCTCCATATATATCCT+CGG + chr3_1:77852979-77852998 Msa0377400:CDS 40.0%
TTGGCTCCATATATATCCTC+GGG + chr3_1:77852980-77852999 Msa0377400:CDS 40.0%
AAGATCCCCGAGGATATATA+TGG - chr3_1:77852989-77853008 None:intergenic 40.0%
! ATATATCCTCGGGGATCTTT+TGG + chr3_1:77852990-77853009 Msa0377400:CDS 40.0%
! TATATCCTCGGGGATCTTTT+GGG + chr3_1:77852991-77853010 Msa0377400:CDS 40.0%
!! TGACGTCCCTTTGTTATTTG+AGG + chr3_1:77853057-77853076 Msa0377400:CDS 40.0%
GAAGCCCATAATTGTTGTGT+GGG + chr3_1:77853099-77853118 Msa0377400:CDS 40.0%
! TTACTCCTTTTACCATCCAG+CGG - chr3_1:77853211-77853230 None:intergenic 40.0%
CCAAAACTCATACCATGTCA+AGG - chr3_1:77853317-77853336 None:intergenic 40.0%
! CCTTGACATGGTATGAGTTT+TGG + chr3_1:77853314-77853333 Msa0377400:CDS 40.0%
ATTCTCGCTTCATTTACCTC+AGG + chr3_1:77853361-77853380 Msa0377400:CDS 40.0%
CATACATAGAACAACACCTG+AGG - chr3_1:77853380-77853399 None:intergenic 40.0%
! TTCCTTTTATTGCCGTTGGT+TGG + chr3_1:77853593-77853612 Msa0377400:three_prime_UTR 40.0%
!! TCCTTTTATTGCCGTTGGTT+GGG + chr3_1:77853594-77853613 Msa0377400:three_prime_UTR 40.0%
GTCAACACATAGGTTGTCAT+TGG + chr3_1:77853729-77853748 Msa0377400:three_prime_UTR 40.0%
GTCATTGGATCAAGATCGAT+TGG + chr3_1:77853744-77853763 Msa0377400:three_prime_UTR 40.0%
ATTGGATCAAGATCGATTGG+TGG + chr3_1:77853747-77853766 Msa0377400:three_prime_UTR 40.0%
! GTTTAATGTCTTGGAGGCAT+TGG - chr3_1:77853903-77853922 None:intergenic 40.0%
TACTTGAGCCAACCAACAAA+AGG + chr3_1:77854124-77854143 Msa0377400:three_prime_UTR 40.0%
ACTTGAGCCAACCAACAAAA+GGG + chr3_1:77854125-77854144 Msa0377400:three_prime_UTR 40.0%
GAAGAGTTGAAGGATTTGCA+AGG + chr3_1:77854187-77854206 Msa0377400:three_prime_UTR 40.0%
!!! TGCAAGGATTTTGAGTTAGG+AGG + chr3_1:77854203-77854222 Msa0377400:three_prime_UTR 40.0%
!!! GCAAGGATTTTGAGTTAGGA+GGG + chr3_1:77854204-77854223 Msa0377400:three_prime_UTR 40.0%
TCTCAGAGGAGAGAAGAGAA+AGG - chr3_1:77843245-77843264 None:intergenic 45.0%
!! AATGGATTTGGTGTGTGGGA+AGG - chr3_1:77843298-77843317 None:intergenic 45.0%
!! GCGATAATGGATTTGGTGTG+TGG - chr3_1:77843303-77843322 None:intergenic 45.0%
GTTCTCACTCAGATTAAGCC+AGG + chr3_1:77843417-77843436 Msa0377400:five_prime_UTR 45.0%
ATTATGCAGCTGCAAGTGCT+TGG + chr3_1:77843922-77843941 Msa0377400:five_prime_UTR 45.0%
GCATTCACCAAGAACACCTA+AGG + chr3_1:77843983-77844002 Msa0377400:five_prime_UTR 45.0%
ATCGGATCCTTAGGTGTTCT+TGG - chr3_1:77843993-77844012 None:intergenic 45.0%
CACTTCTCTTCACACAACTC+CGG - chr3_1:77844176-77844195 None:intergenic 45.0%
GTATGGCATTCCAAAAGCAG+AGG + chr3_1:77844227-77844246 Msa0377400:intron 45.0%
GAGTGTCATATATCGAACCG+TGG + chr3_1:77844339-77844358 Msa0377400:intron 45.0%
TGTTCAATCCTAACTGGGAG+GGG - chr3_1:77844473-77844492 None:intergenic 45.0%
GATGTTCAATCCTAACTGGG+AGG - chr3_1:77844475-77844494 None:intergenic 45.0%
!! TGAAGGTGGACTAATTCTGG+TGG + chr3_1:77844495-77844514 Msa0377400:five_prime_UTR 45.0%
TAAGATGTCCAGTTTGGGTG+AGG - chr3_1:77844544-77844563 None:intergenic 45.0%
CTGTTATACTTACTGGGCCA+AGG - chr3_1:77844592-77844611 None:intergenic 45.0%
ATGAAATATAACGCCCACCG+TGG + chr3_1:77845450-77845469 Msa0377400:intron 45.0%
TGAAATATAACGCCCACCGT+GGG + chr3_1:77845451-77845470 Msa0377400:intron 45.0%
AAAATATAACGCCCACCGTG+GGG + chr3_1:77845494-77845513 Msa0377400:intron 45.0%
ACACCTAACTAGAGGGCTTA+CGG + chr3_1:77845764-77845783 Msa0377400:intron 45.0%
AAACCGTAAGCCCTCTAGTT+AGG - chr3_1:77845770-77845789 None:intergenic 45.0%
! AACTAGAGGGCTTACGGTTT+TGG + chr3_1:77845770-77845789 Msa0377400:intron 45.0%
!! ATGGGAGCATTGAGATGCAT+GGG - chr3_1:77846242-77846261 None:intergenic 45.0%
!! AATGGGAGCATTGAGATGCA+TGG - chr3_1:77846243-77846262 None:intergenic 45.0%
! CCAACATAAGTTGGGTCTAG+TGG - chr3_1:77846590-77846609 None:intergenic 45.0%
CCACTAGACCCAACTTATGT+TGG + chr3_1:77846587-77846606 Msa0377400:intron 45.0%
! CTACTTCTGGAAAGGCAAGA+TGG - chr3_1:77846997-77847016 None:intergenic 45.0%
GTGTTCAAACCCTTAGAACC+GGG + chr3_1:77847125-77847144 Msa0377400:intron 45.0%
! CATCAAGATCCCGGTTCTAA+GGG - chr3_1:77847137-77847156 None:intergenic 45.0%
TGCTGAGGCTTAGAGAATAC+AGG - chr3_1:77847543-77847562 None:intergenic 45.0%
TGTATTCTCTAAGCCTCAGC+AGG + chr3_1:77847542-77847561 Msa0377400:intron 45.0%
! CAAAGGTGTGTGTTATGCTG+AGG + chr3_1:77847852-77847871 Msa0377400:intron 45.0%
TCTTGAACCTTTGTAGCCGT+TGG + chr3_1:77847898-77847917 Msa0377400:intron 45.0%
GATCTTCATCTGGGTTCATG+TGG + chr3_1:77848083-77848102 Msa0377400:intron 45.0%
TCTGGGTTCATGTGGATGAA+CGG + chr3_1:77848091-77848110 Msa0377400:intron 45.0%
TGAACGGTCAGATATGCATC+TGG + chr3_1:77848107-77848126 Msa0377400:intron 45.0%
GAACGGTCAGATATGCATCT+GGG + chr3_1:77848108-77848127 Msa0377400:intron 45.0%
GTACGACTTCAGAATGTTCC+TGG + chr3_1:77848186-77848205 Msa0377400:intron 45.0%
ATCTGTCTTGGAACAAGTGC+AGG + chr3_1:77848226-77848245 Msa0377400:intron 45.0%
GTGCAGCTTGGAAAACATCT+AGG + chr3_1:77848540-77848559 Msa0377400:intron 45.0%
GACACCGCTTCAACTTTAGA+CGG - chr3_1:77849121-77849140 None:intergenic 45.0%
! CTAATCTCCGTAACCGACTT+AGG - chr3_1:77849157-77849176 None:intergenic 45.0%
!!! AGAAGCTTTTTGGGGTTAGC+AGG + chr3_1:77849175-77849194 Msa0377400:intron 45.0%
GTATTGTGATGCGTCCAAGT+TGG + chr3_1:77849267-77849286 Msa0377400:intron 45.0%
! CTTGTATGGTTCGGGATTTG+AGG + chr3_1:77849429-77849448 Msa0377400:intron 45.0%
TGAATATGAGACAGCGAAGG+TGG + chr3_1:77849500-77849519 Msa0377400:intron 45.0%
! TAGAGCATCAGAAACCTGCT+AGG + chr3_1:77850049-77850068 Msa0377400:intron 45.0%
CACCGTTAGATGTACCAGAA+TGG + chr3_1:77850079-77850098 Msa0377400:intron 45.0%
ATTTCCGCCAACTGAGCTAT+AGG - chr3_1:77850234-77850253 None:intergenic 45.0%
GCTTATCATCCCCAAACAGA+TGG + chr3_1:77850384-77850403 Msa0377400:intron 45.0%
TTCCGACTGACCATCTGTTT+GGG - chr3_1:77850397-77850416 None:intergenic 45.0%
TTTCCGACTGACCATCTGTT+TGG - chr3_1:77850398-77850417 None:intergenic 45.0%
AAACAGATGGTCAGTCGGAA+AGG + chr3_1:77850397-77850416 Msa0377400:intron 45.0%
GTATGTGTACTTGAGCAAGG+TGG + chr3_1:77850450-77850469 Msa0377400:intron 45.0%
TACTTGAGCAAGGTGGAACT+TGG + chr3_1:77850457-77850476 Msa0377400:intron 45.0%
ACTTGAGCAAGGTGGAACTT+GGG + chr3_1:77850458-77850477 Msa0377400:intron 45.0%
! CTTTCGAGGCTTTGTATGGT+CGG + chr3_1:77850547-77850566 Msa0377400:intron 45.0%
CCTGTCTCAAACCAACACAA+CGG - chr3_1:77850585-77850604 None:intergenic 45.0%
! GTTTGAGACAGGTGAAAGTG+TGG + chr3_1:77850593-77850612 Msa0377400:intron 45.0%
! ACAGGTGAAAGTGTGGTTCT+AGG + chr3_1:77850600-77850619 Msa0377400:intron 45.0%
GAAAGACCTTGAGTTCCAAG+AGG + chr3_1:77850722-77850741 Msa0377400:intron 45.0%
TCACTCTGAATCACATGGGA+CGG - chr3_1:77850951-77850970 None:intergenic 45.0%
GCAAGTTAGGGACAACCTTA+CGG + chr3_1:77850977-77850996 Msa0377400:intron 45.0%
AAGGTAAAGTCTCCACCGTA+AGG - chr3_1:77850995-77851014 None:intergenic 45.0%
TTGCGGTCATCAATCCTCAA+AGG - chr3_1:77851014-77851033 None:intergenic 45.0%
CGCAAAATGAAGACGTTGAG+AGG + chr3_1:77851029-77851048 Msa0377400:intron 45.0%
CTCCAAACAACTCTCACTAG+AGG - chr3_1:77851065-77851084 None:intergenic 45.0%
CTAGTGAGAGTTGTTTGGAG+TGG + chr3_1:77851065-77851084 Msa0377400:intron 45.0%
TACTGGTGAAAGCTTGACGT+GGG + chr3_1:77851091-77851110 Msa0377400:intron 45.0%
TACCCAGAGTTGTTTGCTTG+AGG + chr3_1:77851140-77851159 Msa0377400:intron 45.0%
AGAATTTGGGCTGTGTTGTG+AGG + chr3_1:77851429-77851448 Msa0377400:intron 45.0%
AAAGAGAGAAGAACCAAGGG+AGG + chr3_1:77851569-77851588 Msa0377400:intron 45.0%
AAGAGAGAAGAACCAAGGGA+GGG + chr3_1:77851570-77851589 Msa0377400:intron 45.0%
! GGATTGCATCGGGACAATTT+TGG - chr3_1:77852105-77852124 None:intergenic 45.0%
ACGTGCGAAAAGGATTGCAT+CGG - chr3_1:77852116-77852135 None:intergenic 45.0%
TCAAGACTACACGTGCGAAA+AGG - chr3_1:77852126-77852145 None:intergenic 45.0%
CAGTCACCTGAACAAACTTC+TGG - chr3_1:77852199-77852218 None:intergenic 45.0%
CTGAGTTTGTCTCACTTACC+TGG - chr3_1:77852471-77852490 None:intergenic 45.0%
ACTGCACCCTTGAAACTTGT+CGG - chr3_1:77852503-77852522 None:intergenic 45.0%
ATGAGGATTGTTGGACTGAC+TGG + chr3_1:77852537-77852556 Msa0377400:CDS 45.0%
ATTTGGGGAAAACCCTCTCA+TGG + chr3_1:77852694-77852713 Msa0377400:intron 45.0%
AATAACCACCGACCATGAGA+GGG - chr3_1:77852709-77852728 None:intergenic 45.0%
TCTCATGGTCGGTGGTTATT+GGG + chr3_1:77852709-77852728 Msa0377400:intron 45.0%
AAAAGTTGTTGCCGCGTTTG+GGG + chr3_1:77852778-77852797 Msa0377400:CDS 45.0%
TAGAATTTCCTCCCCAAACG+CGG - chr3_1:77852792-77852811 None:intergenic 45.0%
GAAGTTAACAGACCCAGACT+TGG + chr3_1:77852824-77852843 Msa0377400:CDS 45.0%
TGGCTCCATATATATCCTCG+GGG + chr3_1:77852981-77853000 Msa0377400:CDS 45.0%
TTTGGGAAGTTGTGAAGCTG+TGG + chr3_1:77853008-77853027 Msa0377400:CDS 45.0%
GTTGTGAAGCTGTGGTTGAA+AGG + chr3_1:77853016-77853035 Msa0377400:CDS 45.0%
GCTGTGGTTGAAAGGTTACA+AGG + chr3_1:77853024-77853043 Msa0377400:CDS 45.0%
CGAAGCCCATAATTGTTGTG+TGG + chr3_1:77853098-77853117 Msa0377400:CDS 45.0%
AAGAGATAAGTCTAGCGAGG+AGG + chr3_1:77853156-77853175 Msa0377400:CDS 45.0%
!! GGTATGAGTTTTGGCGTTCT+AGG + chr3_1:77853323-77853342 Msa0377400:CDS 45.0%
TCCCAACCAACGGCAATAAA+AGG - chr3_1:77853598-77853617 None:intergenic 45.0%
!! ATGTGTTGACTGTGAATGCG+TGG - chr3_1:77853719-77853738 None:intergenic 45.0%
CGCATTCACAGTCAACACAT+AGG + chr3_1:77853719-77853738 Msa0377400:three_prime_UTR 45.0%
!! AGGAGGCATTGGATTGAGAT+CGG - chr3_1:77853837-77853856 None:intergenic 45.0%
CATCACACAAATAGCACACC+AGG - chr3_1:77853857-77853876 None:intergenic 45.0%
!! CTGGTGTGCTATTTGTGTGA+TGG + chr3_1:77853855-77853874 Msa0377400:three_prime_UTR 45.0%
!! CTATTTGTGTGATGGACTGC+AGG + chr3_1:77853863-77853882 Msa0377400:three_prime_UTR 45.0%
!! GTCTTGGAGGCATTGGATTT+GGG - chr3_1:77853896-77853915 None:intergenic 45.0%
!! TGTCTTGGAGGCATTGGATT+TGG - chr3_1:77853897-77853916 None:intergenic 45.0%
! GTTGGTTGGCTCAAGTACAA+GGG - chr3_1:77854121-77854140 None:intergenic 45.0%
! TGTTGGTTGGCTCAAGTACA+AGG - chr3_1:77854122-77854141 None:intergenic 45.0%
GCTTCAGCTGCTGAAAATTG+TGG + chr3_1:77854150-77854169 Msa0377400:three_prime_UTR 45.0%
!! TTATATTTAAAAAAAAAACA+AGG - chr3_1:77845965-77845984 None:intergenic 5.0%
!! AAAATAAAAATATTAGAATT+TGG + chr3_1:77851415-77851434 Msa0377400:intron 5.0%
!! AAATAAAAATATTAGAATTT+GGG + chr3_1:77851416-77851435 Msa0377400:intron 5.0%
CAGAGGAGAGAAGAGAAAGG+CGG - chr3_1:77843242-77843261 None:intergenic 50.0%
! TGCTGCGATTTGCTTCTCAG+AGG - chr3_1:77843259-77843278 None:intergenic 50.0%
!!! TTTGGTGCCCTGCATCCTTT+TGG + chr3_1:77843892-77843911 Msa0377400:five_prime_UTR 50.0%
AACACCAACCTCACCCAAAC+TGG + chr3_1:77844533-77844552 Msa0377400:five_prime_UTR 50.0%
ATGTCCAGTTTGGGTGAGGT+TGG - chr3_1:77844540-77844559 None:intergenic 50.0%
GAAATATAACGCCCACCGTG+GGG + chr3_1:77845452-77845471 Msa0377400:intron 50.0%
GCTCTTAACCTTGTGGTCGT+GGG - chr3_1:77845526-77845545 None:intergenic 50.0%
GCTCTACCAACTGAGCTAGA+CGG + chr3_1:77845551-77845570 Msa0377400:intron 50.0%
CTCTACCAACTGAGCTAGAC+GGG + chr3_1:77845552-77845571 Msa0377400:intron 50.0%
! AATTGCCCGTCTAGCTCAGT+TGG - chr3_1:77845560-77845579 None:intergenic 50.0%
TTCTACAGCCTAGCAGCCAA+TGG + chr3_1:77846672-77846691 Msa0377400:intron 50.0%
GCATCAAGATCCCGGTTCTA+AGG - chr3_1:77847138-77847157 None:intergenic 50.0%
! GGAGTAGACTAGCCCACATT+GGG - chr3_1:77847429-77847448 None:intergenic 50.0%
! AGGAGTAGACTAGCCCACAT+TGG - chr3_1:77847430-77847449 None:intergenic 50.0%
TGAACAGAGTTGTACGGTGC+AGG - chr3_1:77847503-77847522 None:intergenic 50.0%
ACACTCTCCAACGGCTACAA+AGG - chr3_1:77847908-77847927 None:intergenic 50.0%
!! AAGTTGAAGCGGTGTCGCAA+TGG + chr3_1:77849125-77849144 Msa0377400:intron 50.0%
!! AGTTGAAGCGGTGTCGCAAT+GGG + chr3_1:77849126-77849145 Msa0377400:intron 50.0%
GCAATGGGAGACTCCTAAGT+CGG + chr3_1:77849141-77849160 Msa0377400:intron 50.0%
GGAGACTCCTAAGTCGGTTA+CGG + chr3_1:77849147-77849166 Msa0377400:intron 50.0%
! TCGTCTCGGAGCGTTAAGTT+AGG + chr3_1:77849688-77849707 Msa0377400:intron 50.0%
CAAGGTGTGCTGAGATTTCG+AGG + chr3_1:77849835-77849854 Msa0377400:intron 50.0%
GTGTGCTGAGATTTCGAGGT+AGG + chr3_1:77849839-77849858 Msa0377400:intron 50.0%
!! AACGGTGTCATCAACCTAGC+AGG - chr3_1:77850066-77850085 None:intergenic 50.0%
TCCCCAAACAGATGGTCAGT+CGG + chr3_1:77850392-77850411 Msa0377400:intron 50.0%
TCCGACTGACCATCTGTTTG+GGG - chr3_1:77850396-77850415 None:intergenic 50.0%
TATTGGGATGGCACCTTTCG+AGG + chr3_1:77850533-77850552 Msa0377400:intron 50.0%
! GCACCTTTCGAGGCTTTGTA+TGG + chr3_1:77850543-77850562 Msa0377400:intron 50.0%
CGACCATACAAAGCCTCGAA+AGG - chr3_1:77850549-77850568 None:intergenic 50.0%
! CTTTGTATGGTCGGAGGTGT+AGG + chr3_1:77850556-77850575 Msa0377400:intron 50.0%
!! CCGTTGTGTTGGTTTGAGAC+AGG + chr3_1:77850582-77850601 Msa0377400:intron 50.0%
AGAACACATGGTCTCCCTCT+TGG - chr3_1:77850740-77850759 None:intergenic 50.0%
TTGAGAGTTACTCCGACGAC+CGG + chr3_1:77850759-77850778 Msa0377400:intron 50.0%
ATCTGAGAGAATTGGCACGG+TGG + chr3_1:77850842-77850861 Msa0377400:intron 50.0%
TGTTTCATGTGTCGCAGCTG+AGG + chr3_1:77850910-77850929 Msa0377400:intron 50.0%
CACTCTGAATCACATGGGAC+GGG - chr3_1:77850950-77850969 None:intergenic 50.0%
AGTTAGGGACAACCTTACGG+TGG + chr3_1:77850980-77850999 Msa0377400:intron 50.0%
CGGTGGAGACTTTACCTTTG+AGG + chr3_1:77850997-77851016 Msa0377400:intron 50.0%
! GTTGTTTGGAGTGGCACTAC+TGG + chr3_1:77851074-77851093 Msa0377400:intron 50.0%
CTACTGGTGAAAGCTTGACG+TGG + chr3_1:77851090-77851109 Msa0377400:intron 50.0%
GCTGCGATTCTGCTATTACC+AGG + chr3_1:77851592-77851611 Msa0377400:intron 50.0%
GCGAGCGATGAATGTCAGTA+CGG - chr3_1:77851871-77851890 None:intergenic 50.0%
GCGAGTTATTCTGCTCGCAA+TGG - chr3_1:77851989-77852008 None:intergenic 50.0%
ATAACTCGCCACTGCGAGTA+AGG + chr3_1:77852000-77852019 Msa0377400:intron 50.0%
TCCTAAGTCCTTACTCGCAG+TGG - chr3_1:77852011-77852030 None:intergenic 50.0%
ACTATCAGCCTAACTCGCAG+TGG - chr3_1:77852079-77852098 None:intergenic 50.0%
CGTGCGAAAAGGATTGCATC+GGG - chr3_1:77852115-77852134 None:intergenic 50.0%
AGGATTGTTGGACTGACTGG+TGG + chr3_1:77852540-77852559 Msa0377400:CDS 50.0%
CTGACTGGTGGAATAGCAAG+TGG + chr3_1:77852552-77852571 Msa0377400:CDS 50.0%
!! CTACATCAGCGTCGACAACA+GGG - chr3_1:77852617-77852636 None:intergenic 50.0%
!! ACTACATCAGCGTCGACAAC+AGG - chr3_1:77852618-77852637 None:intergenic 50.0%
CAATAACCACCGACCATGAG+AGG - chr3_1:77852710-77852729 None:intergenic 50.0%
CTCTCATGGTCGGTGGTTAT+TGG + chr3_1:77852708-77852727 Msa0377400:intron 50.0%
GATGCGTTGAAGAAAGGGAG+CGG + chr3_1:77852746-77852765 Msa0377400:CDS 50.0%
AACTTCCCAAAAGATCCCCG+AGG - chr3_1:77852999-77853018 None:intergenic 50.0%
GGCAAGAGATAAGTCTAGCG+AGG + chr3_1:77853153-77853172 Msa0377400:CDS 50.0%
GATAAGTCTAGCGAGGAGGA+TGG + chr3_1:77853160-77853179 Msa0377400:CDS 50.0%
AGATGCCGCTGGATGGTAAA+AGG + chr3_1:77853203-77853222 Msa0377400:CDS 50.0%
!!! AACGTTTTGGTTCGGGTCAC+CGG + chr3_1:77853289-77853308 Msa0377400:CDS 50.0%
CTCATACCATGTCAAGGGTC+CGG - chr3_1:77853311-77853330 None:intergenic 50.0%
!! TGAGTTTTGGCGTTCTAGGC+AGG + chr3_1:77853327-77853346 Msa0377400:CDS 50.0%
!! GAGTTTTGGCGTTCTAGGCA+GGG + chr3_1:77853328-77853347 Msa0377400:CDS 50.0%
GATCTCAATCCAATGCCTCC+TGG + chr3_1:77853836-77853855 Msa0377400:three_prime_UTR 50.0%
! AATAGCACACCAGGAGGCAT+TGG - chr3_1:77853848-77853867 None:intergenic 50.0%
CACACAAATAGCACACCAGG+AGG - chr3_1:77853854-77853873 None:intergenic 50.0%
! GAAGCAGCCCTTTTGTTGGT+TGG - chr3_1:77854135-77854154 None:intergenic 50.0%
! AGCTGAAGCAGCCCTTTTGT+TGG - chr3_1:77854139-77854158 None:intergenic 50.0%
TCAACACACCCCTCCCAGTT+AGG + chr3_1:77844462-77844481 Msa0377400:intron 55.0%
GGCTCTTAACCTTGTGGTCG+TGG - chr3_1:77845527-77845546 None:intergenic 55.0%
GCGCAAGGCTCTTAACCTTG+TGG - chr3_1:77845533-77845552 None:intergenic 55.0%
!! AGCTCAGTTGGTAGAGCGCA+AGG - chr3_1:77845548-77845567 None:intergenic 55.0%
! AACGTTGGCCATTGGCTGCT+AGG - chr3_1:77846683-77846702 None:intergenic 55.0%
! AGAAAGGTGCAAGCCTGCTG+AGG - chr3_1:77847558-77847577 None:intergenic 55.0%
GACCAGTGGACACTCTCCAA+CGG - chr3_1:77847917-77847936 None:intergenic 55.0%
!! AGTGTAAGTTGGTGGGTCCC+AGG - chr3_1:77847953-77847972 None:intergenic 55.0%
! GATGCGTCCAAGTTGGGCTT+AGG + chr3_1:77849274-77849293 Msa0377400:intron 55.0%
GGCGGTGTGCTTATGCAAGA+TGG + chr3_1:77849295-77849314 Msa0377400:intron 55.0%
! TCGAGGCTTTGTATGGTCGG+AGG + chr3_1:77850550-77850569 Msa0377400:intron 55.0%
GGTGTAGGACTCCGTTGTGT+TGG + chr3_1:77850571-77850590 Msa0377400:intron 55.0%
GGTCTCCCTCTTGGAACTCA+AGG - chr3_1:77850731-77850750 None:intergenic 55.0%
CTTCAATGCACGACCAACGC+CGG - chr3_1:77850781-77850800 None:intergenic 55.0%
GGCACGGTGGCTTATAGAGT+TGG + chr3_1:77850855-77850874 Msa0377400:intron 55.0%
GAATCACATGGGACGGGTCT+GGG - chr3_1:77850944-77850963 None:intergenic 55.0%
TGAATCACATGGGACGGGTC+TGG - chr3_1:77850945-77850964 None:intergenic 55.0%
TGATCGCAGTTGCGAGCTCT+GGG - chr3_1:77851931-77851950 None:intergenic 55.0%
TTGATCGCAGTTGCGAGCTC+TGG - chr3_1:77851932-77851951 None:intergenic 55.0%
GCCACTGCGAGTAAGGACTT+AGG + chr3_1:77852007-77852026 Msa0377400:intron 55.0%
GTTACTCGCCACTGCGAGTT+AGG + chr3_1:77852068-77852087 Msa0377400:intron 55.0%
CTTACCTGGGTGAGCATGGA+CGG - chr3_1:77852457-77852476 None:intergenic 55.0%
CTCACTTACCTGGGTGAGCA+TGG - chr3_1:77852461-77852480 None:intergenic 55.0%
GGGGAAAACCCTCTCATGGT+CGG + chr3_1:77852698-77852717 Msa0377400:intron 55.0%
GAAAACCCTCTCATGGTCGG+TGG + chr3_1:77852701-77852720 Msa0377400:intron 55.0%
AGTCTAGCGAGGAGGATGGT+CGG + chr3_1:77853164-77853183 Msa0377400:CDS 55.0%
AATGCTCAGATGCCGCTGGA+TGG + chr3_1:77853196-77853215 Msa0377400:CDS 55.0%
!! TTGTGTGATGGACTGCAGGC+AGG + chr3_1:77853867-77853886 Msa0377400:three_prime_UTR 55.0%
!! AGCCGTTGGAGAGTGTCCAC+TGG + chr3_1:77847912-77847931 Msa0377400:intron 60.0%
GACACGTGGCACAAGACCAG+TGG - chr3_1:77847931-77847950 None:intergenic 60.0%
!! TGGTCTTGTGCCACGTGTCC+TGG + chr3_1:77847932-77847951 Msa0377400:intron 60.0%
! GGTCTTGTGCCACGTGTCCT+GGG + chr3_1:77847933-77847952 Msa0377400:intron 60.0%
! GCGTCCAAGTTGGGCTTAGG+CGG + chr3_1:77849277-77849296 Msa0377400:intron 60.0%
CACACCGCCTAAGCCCAACT+TGG - chr3_1:77849284-77849303 None:intergenic 60.0%
GCTCGCAATGGCGAGCTTAC+AGG - chr3_1:77851977-77851996 None:intergenic 60.0%
ATGACCGTCCATGCTCACCC+AGG + chr3_1:77852450-77852469 Msa0377400:intron 60.0%
GCGTTGAAGAAAGGGAGCGG+CGG + chr3_1:77852749-77852768 Msa0377400:CDS 60.0%
TGAAGAAAGGGAGCGGCGGA+TGG + chr3_1:77852753-77852772 Msa0377400:CDS 60.0%
AGTTGTTGCCGCGTTTGGGG+AGG + chr3_1:77852781-77852800 Msa0377400:CDS 60.0%
CGAGGAGGATGGTCGGAACA+AGG + chr3_1:77853171-77853190 Msa0377400:CDS 60.0%
GGTCAATGCTCAGATGCCGC+TGG + chr3_1:77853192-77853211 Msa0377400:CDS 60.0%
GGCTCGAACCCACGACCACA+AGG + chr3_1:77845515-77845534 Msa0377400:intron 65.0%
! TTGGTGGGTCCCAGGACACG+TGG - chr3_1:77847945-77847964 None:intergenic 65.0%
GTTACTCCGACGACCGGCGT+TGG + chr3_1:77850765-77850784 Msa0377400:intron 65.0%
GCAGAATCGCAGCCCTCCCT+TGG - chr3_1:77851585-77851604 None:intergenic 65.0%
GGGTCACCGGACCCTTGACA+TGG + chr3_1:77853302-77853321 Msa0377400:CDS 65.0%
GTGGGTTCGAGCCCCACGGT+GGG - chr3_1:77845466-77845485 None:intergenic 70.0%
GGTCGTGGGTTCGAGCCCCA+CGG - chr3_1:77845470-77845489 None:intergenic 70.0%
GTGGGTTCGAGCCCCACGGT+GGG - chr3_1:77845466-77845485 None:intergenic 70.0%
GGTCGTGGGTTCGAGCCCCA+CGG - chr3_1:77845470-77845489 None:intergenic 70.0%
GCACGACCAACGCCGGTCGT+CGG - chr3_1:77850774-77850793 None:intergenic 70.0%
CGTGGGTTCGAGCCCCACGG+TGG - chr3_1:77845467-77845486 None:intergenic 75.0%
CGTGGGTTCGAGCCCCACGG+TGG - chr3_1:77845467-77845486 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 77843149 77854406 77843149 ID=Msa0377400;Name=Msa0377400
chr3_1 mRNA 77843149 77854406 77843149 ID=Msa0377400-mRNA-1;Parent=Msa0377400;Name=Msa0377400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=594|1|1|1|0.33|0.14|7|959|234
chr3_1 exon 77843149 77843439 77843149 ID=Msa0377400-mRNA-1:exon:18628;Parent=Msa0377400-mRNA-1
chr3_1 exon 77843873 77844018 77843873 ID=Msa0377400-mRNA-1:exon:18629;Parent=Msa0377400-mRNA-1
chr3_1 exon 77844480 77844571 77844480 ID=Msa0377400-mRNA-1:exon:18630;Parent=Msa0377400-mRNA-1
chr3_1 exon 77852472 77852644 77852472 ID=Msa0377400-mRNA-1:exon:18631;Parent=Msa0377400-mRNA-1
chr3_1 exon 77852746 77852891 77852746 ID=Msa0377400-mRNA-1:exon:18632;Parent=Msa0377400-mRNA-1
chr3_1 exon 77852976 77854272 77852976 ID=Msa0377400-mRNA-1:exon:18633;Parent=Msa0377400-mRNA-1
chr3_1 exon 77854294 77854406 77854294 ID=Msa0377400-mRNA-1:exon:18634;Parent=Msa0377400-mRNA-1
chr3_1 five_prime_UTR 77843149 77843439 77843149 ID=Msa0377400-mRNA-1:five_prime_utr;Parent=Msa0377400-mRNA-1
chr3_1 five_prime_UTR 77843873 77844018 77843873 ID=Msa0377400-mRNA-1:five_prime_utr;Parent=Msa0377400-mRNA-1
chr3_1 five_prime_UTR 77844480 77844571 77844480 ID=Msa0377400-mRNA-1:five_prime_utr;Parent=Msa0377400-mRNA-1
chr3_1 five_prime_UTR 77852472 77852536 77852472 ID=Msa0377400-mRNA-1:five_prime_utr;Parent=Msa0377400-mRNA-1
chr3_1 CDS 77852537 77852644 77852537 ID=Msa0377400-mRNA-1:cds;Parent=Msa0377400-mRNA-1
chr3_1 CDS 77852746 77852891 77852746 ID=Msa0377400-mRNA-1:cds;Parent=Msa0377400-mRNA-1
chr3_1 CDS 77852976 77853426 77852976 ID=Msa0377400-mRNA-1:cds;Parent=Msa0377400-mRNA-1
chr3_1 three_prime_UTR 77853427 77854272 77853427 ID=Msa0377400-mRNA-1:three_prime_utr;Parent=Msa0377400-mRNA-1
chr3_1 three_prime_UTR 77854294 77854406 77854294 ID=Msa0377400-mRNA-1:three_prime_utr;Parent=Msa0377400-mRNA-1
Gene Sequence

>Msa0377400

ATGAGGATTGTTGGACTGACTGGTGGAATAGCAAGTGGCAAGAGCACCGTTTCCAATTTATTCAAGTCTCACGACATCCCTGTTGTCGACGCTGATGTAGTTGCTCGTGATGCGTTGAAGAAAGGGAGCGGCGGATGGAAAAAAGTTGTTGCCGCGTTTGGGGAGGAAATTCTACTAGACAATGGAGAAGTTAACAGACCCAGACTTGGCCAAATCGTTTTTGCTGATCCTGATAAGCGTCAATTTCTCAATCGGTTGTTGGCTCCATATATATCCTCGGGGATCTTTTGGGAAGTTGTGAAGCTGTGGTTGAAAGGTTACAAGGTCATTGTTCTTGACGTCCCTTTGTTATTTGAGGCTAAGATTGACAAGTTCACGAAGCCCATAATTGTTGTGTGGGTTGATCCTGAAACACAGATTCAGAGACTCTTGGCAAGAGATAAGTCTAGCGAGGAGGATGGTCGGAACAAGGTCAATGCTCAGATGCCGCTGGATGGTAAAAGGAGTAAAGCTGATATAGTAATCGACAACACTGGTTCACTAGATGACTTGAATGAACAATTTCAGAACGTTTTGGTTCGGGTCACCGGACCCTTGACATGGTATGAGTTTTGGCGTTCTAGGCAGGGAGTCTCAATCATTCTCGCTTCATTTACCTCAGGTGTTGTTCTATGTATGAAGACATTTAACAACAACAGTTTATAG
Protein sequence

>Msa0377400

MRIVGLTGGIASGKSTVSNLFKSHDIPVVDADVVARDALKKGSGGWKKVVAAFGEEILLDNGEVNRPRLGQIVFADPDKRQFLNRLLAPYISSGIFWEVVKLWLKGYKVIVLDVPLLFEAKIDKFTKPIIVVWVDPETQIQRLLARDKSSEEDGRNKVNAQMPLDGKRSKADIVIDNTGSLDDLNEQFQNVLVRVTGPLTWYEFWRSRQGVSIILASFTSGVVLCMKTFNNNSL*