Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113970 | XP_013467519.1 | 97.414 | 116 | 3 | 0 | 1 | 116 | 1 | 116 | 1.20e-70 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113970 | A0A072VIW8 | 97.414 | 116 | 3 | 0 | 1 | 116 | 1 | 116 | 5.71e-71 | 216 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0113970 | 0.808893 | 2.476018e-50 | -8.615850e-47 |
| Msa0004920 | Msa0113970 | 0.812322 | 4.493592e-51 | -8.615850e-47 |
| Msa0015390 | Msa0113970 | 0.806860 | 6.699493e-50 | -8.615850e-47 |
| Msa0017510 | Msa0113970 | 0.814473 | 1.513084e-51 | -8.615850e-47 |
| Msa0018620 | Msa0113970 | 0.808757 | 2.647720e-50 | -8.615850e-47 |
| Msa0020930 | Msa0113970 | 0.811053 | 8.486410e-51 | -8.615850e-47 |
| Msa0026910 | Msa0113970 | 0.804770 | 1.841255e-49 | -8.615850e-47 |
| Msa0031340 | Msa0113970 | 0.819001 | 1.460145e-52 | -8.615850e-47 |
| Msa0040450 | Msa0113970 | 0.841649 | 4.179835e-58 | -8.615850e-47 |
| Msa0044020 | Msa0113970 | 0.811619 | 6.394953e-51 | -8.615850e-47 |
| Msa0051770 | Msa0113970 | 0.801968 | 7.008275e-49 | -8.615850e-47 |
| Msa0052730 | Msa0113970 | 0.805293 | 1.431610e-49 | -8.615850e-47 |
| Msa0076000 | Msa0113970 | 0.820095 | 8.218633e-53 | -8.615850e-47 |
| Msa0090100 | Msa0113970 | 0.801117 | 1.047687e-48 | -8.615850e-47 |
| Msa0110970 | Msa0113970 | 0.807308 | 5.385669e-50 | -8.615850e-47 |
| Msa0113970 | Msa0115810 | 0.806706 | 7.220619e-50 | -8.615850e-47 |
| Msa0113970 | Msa0150800 | 0.802356 | 5.832273e-49 | -8.615850e-47 |
| Msa0113970 | Msa0157100 | 0.835256 | 1.865809e-56 | -8.615850e-47 |
| Msa0113970 | Msa0157290 | 0.813584 | 2.376658e-51 | -8.615850e-47 |
| Msa0113970 | Msa0170570 | 0.815434 | 9.262819e-52 | -8.615850e-47 |
| Msa0113970 | Msa0171290 | 0.802367 | 5.802039e-49 | -8.615850e-47 |
| Msa0113970 | Msa0173990 | 0.825039 | 5.824275e-54 | -8.615850e-47 |
| Msa0113970 | Msa0182680 | 0.821211 | 4.556039e-53 | -8.615850e-47 |
| Msa0113970 | Msa0185590 | 0.807560 | 4.763111e-50 | -8.615850e-47 |
| Msa0113970 | Msa0186890 | 0.847481 | 1.125612e-59 | -8.615850e-47 |
| Msa0113970 | Msa0188680 | -0.807241 | 5.565612e-50 | -8.615850e-47 |
| Msa0113970 | Msa0189290 | 0.803273 | 3.771841e-49 | -8.615850e-47 |
| Msa0113970 | Msa0204980 | 0.810916 | 9.087231e-51 | -8.615850e-47 |
| Msa0113970 | Msa0205850 | 0.839699 | 1.355019e-57 | -8.615850e-47 |
| Msa0113970 | Msa0210450 | 0.808094 | 3.666679e-50 | -8.615850e-47 |
| Msa0113970 | Msa0216240 | 0.823432 | 1.389565e-53 | -8.615850e-47 |
| Msa0113970 | Msa0220580 | 0.827755 | 1.312881e-54 | -8.615850e-47 |
| Msa0113970 | Msa0231650 | 0.816447 | 5.503898e-52 | -8.615850e-47 |
| Msa0113970 | Msa0231880 | 0.833154 | 6.278450e-56 | -8.615850e-47 |
| Msa0113970 | Msa0233350 | 0.814690 | 1.355146e-51 | -8.615850e-47 |
| Msa0113970 | Msa0237230 | 0.804311 | 2.295358e-49 | -8.615850e-47 |
| Msa0113970 | Msa0241640 | 0.802732 | 4.879697e-49 | -8.615850e-47 |
| Msa0113970 | Msa0243100 | 0.812272 | 4.608449e-51 | -8.615850e-47 |
| Msa0113970 | Msa0244860 | 0.837200 | 5.980632e-57 | -8.615850e-47 |
| Msa0113970 | Msa0246430 | 0.830639 | 2.622363e-55 | -8.615850e-47 |
| Msa0113970 | Msa0258760 | 0.801097 | 1.057592e-48 | -8.615850e-47 |
| Msa0113970 | Msa0260210 | 0.800100 | 1.688265e-48 | -8.615850e-47 |
| Msa0113970 | Msa0262340 | 0.802814 | 4.693144e-49 | -8.615850e-47 |
| Msa0113970 | Msa0270220 | -0.827230 | 1.754384e-54 | -8.615850e-47 |
| Msa0113970 | Msa0271810 | 0.829553 | 4.826362e-55 | -8.615850e-47 |
| Msa0113970 | Msa0276920 | 0.813339 | 2.691111e-51 | -8.615850e-47 |
| Msa0113970 | Msa0279790 | 0.824312 | 8.639889e-54 | -8.615850e-47 |
| Msa0113970 | Msa0282250 | 0.823769 | 1.159106e-53 | -8.615850e-47 |
| Msa0113970 | Msa0283450 | 0.831760 | 1.390619e-55 | -8.615850e-47 |
| Msa0113970 | Msa0283520 | 0.839481 | 1.543996e-57 | -8.615850e-47 |
| Msa0113970 | Msa0287410 | 0.801267 | 9.758329e-49 | -8.615850e-47 |
| Msa0113970 | Msa0287650 | 0.821046 | 4.971438e-53 | -8.615850e-47 |
| Msa0113970 | Msa0291500 | 0.808468 | 3.052304e-50 | -8.615850e-47 |
| Msa0113970 | Msa0304290 | 0.800890 | 1.165341e-48 | -8.615850e-47 |
| Msa0113970 | Msa0304330 | 0.803416 | 3.522742e-49 | -8.615850e-47 |
| Msa0113970 | Msa0307830 | -0.822832 | 1.918409e-53 | -8.615850e-47 |
| Msa0113970 | Msa0311700 | 0.834967 | 2.205900e-56 | -8.615850e-47 |
| Msa0113970 | Msa0316800 | 0.800571 | 1.354026e-48 | -8.615850e-47 |
| Msa0113970 | Msa0317730 | 0.831897 | 1.286598e-55 | -8.615850e-47 |
| Msa0113970 | Msa0329320 | 0.808879 | 2.492701e-50 | -8.615850e-47 |
| Msa0113970 | Msa0329350 | 0.804167 | 2.460329e-49 | -8.615850e-47 |
| Msa0113970 | Msa0332000 | 0.840330 | 9.278265e-58 | -8.615850e-47 |
| Msa0113970 | Msa0333920 | 0.806421 | 8.293499e-50 | -8.615850e-47 |
| Msa0113970 | Msa0333930 | 0.809874 | 1.525322e-50 | -8.615850e-47 |
| Msa0113970 | Msa0334040 | 0.816269 | 6.032459e-52 | -8.615850e-47 |
| Msa0113970 | Msa0337620 | 0.803629 | 3.182221e-49 | -8.615850e-47 |
| Msa0113970 | Msa0355270 | 0.800745 | 1.247852e-48 | -8.615850e-47 |
| Msa0113970 | Msa0366240 | 0.814153 | 1.781302e-51 | -8.615850e-47 |
| Msa0113970 | Msa0372660 | 0.819764 | 9.786381e-53 | -8.615850e-47 |
| Msa0113970 | Msa0372670 | 0.809588 | 1.757117e-50 | -8.615850e-47 |
| Msa0113970 | Msa0373930 | 0.807797 | 4.240943e-50 | -8.615850e-47 |
| Msa0113970 | Msa0376590 | 0.802713 | 4.923272e-49 | -8.615850e-47 |
| Msa0113970 | Msa0377400 | 0.800039 | 1.737254e-48 | -8.615850e-47 |
| Msa0113970 | Msa0385580 | 0.812696 | 3.723961e-51 | -8.615850e-47 |
| Msa0113970 | Msa0402330 | 0.800943 | 1.136694e-48 | -8.615850e-47 |
| Msa0113970 | Msa0410650 | 0.817026 | 4.082504e-52 | -8.615850e-47 |
| Msa0113970 | Msa0414170 | 0.810800 | 9.628238e-51 | -8.615850e-47 |
| Msa0113970 | Msa0414950 | -0.806418 | 8.306387e-50 | -8.615850e-47 |
| Msa0113970 | Msa0415810 | 0.805624 | 1.220210e-49 | -8.615850e-47 |
| Msa0113970 | Msa0416300 | 0.814804 | 1.278483e-51 | -8.615850e-47 |
| Msa0113970 | Msa0419820 | 0.824700 | 7.001698e-54 | -8.615850e-47 |
| Msa0113970 | Msa0426330 | 0.823229 | 1.549679e-53 | -8.615850e-47 |
| Msa0113970 | Msa0427200 | 0.803567 | 3.278540e-49 | -8.615850e-47 |
| Msa0113970 | Msa0430790 | 0.801052 | 1.079867e-48 | -8.615850e-47 |
| Msa0113970 | Msa0433640 | 0.814168 | 1.767446e-51 | -8.615850e-47 |
| Msa0113970 | Msa0449830 | 0.800093 | 1.694301e-48 | -8.615850e-47 |
| Msa0113970 | Msa0470690 | 0.801132 | 1.039946e-48 | -8.615850e-47 |
| Msa0113970 | Msa0473080 | 0.824159 | 9.386797e-54 | -8.615850e-47 |
| Msa0113970 | Msa0474950 | 0.801277 | 9.716121e-49 | -8.615850e-47 |
| Msa0113970 | Msa0484780 | 0.850049 | 2.182687e-60 | -8.615850e-47 |
| Msa0113970 | Msa0495320 | 0.806671 | 7.345558e-50 | -8.615850e-47 |
| Msa0113970 | Msa0498650 | 0.804476 | 2.121299e-49 | -8.615850e-47 |
| Msa0113970 | Msa0506890 | 0.809149 | 2.182518e-50 | -8.615850e-47 |
| Msa0113970 | Msa0507680 | 0.823094 | 1.666128e-53 | -8.615850e-47 |
| Msa0113970 | Msa0516370 | 0.811497 | 6.797274e-51 | -8.615850e-47 |
| Msa0113970 | Msa0521540 | 0.819556 | 1.091398e-52 | -8.615850e-47 |
| Msa0113970 | Msa0523460 | 0.811341 | 7.350324e-51 | -8.615850e-47 |
| Msa0113970 | Msa0526890 | 0.804149 | 2.481638e-49 | -8.615850e-47 |
| Msa0113970 | Msa0541860 | 0.846492 | 2.099913e-59 | -8.615850e-47 |
| Msa0113970 | Msa0545070 | 0.810142 | 1.335024e-50 | -8.615850e-47 |
| Msa0113970 | Msa0546680 | 0.808554 | 2.924873e-50 | -8.615850e-47 |
| Msa0113970 | Msa0547360 | 0.814058 | 1.869293e-51 | -8.615850e-47 |
| Msa0113970 | Msa0552810 | 0.810121 | 1.349429e-50 | -8.615850e-47 |
| Msa0113970 | Msa0563840 | 0.829510 | 4.944815e-55 | -8.615850e-47 |
| Msa0113970 | Msa0577220 | 0.821614 | 3.677004e-53 | -8.615850e-47 |
| Msa0113970 | Msa0577500 | 0.837372 | 5.403921e-57 | -8.615850e-47 |
| Msa0113970 | Msa0616160 | 0.802017 | 6.849423e-49 | -8.615850e-47 |
| Msa0113970 | Msa0626090 | 0.804076 | 2.570054e-49 | -8.615850e-47 |
| Msa0113970 | Msa0630830 | 0.805669 | 1.194156e-49 | -8.615850e-47 |
| Msa0113970 | Msa0633840 | 0.806632 | 7.484595e-50 | -8.615850e-47 |
| Msa0113970 | Msa0638070 | 0.817279 | 3.581670e-52 | -8.615850e-47 |
| Msa0113970 | Msa0639310 | 0.805414 | 1.350616e-49 | -8.615850e-47 |
| Msa0113970 | Msa0643220 | 0.804989 | 1.657657e-49 | -8.615850e-47 |
| Msa0113970 | Msa0657970 | 0.821478 | 3.951647e-53 | -8.615850e-47 |
| Msa0113970 | Msa0663900 | 0.814295 | 1.656644e-51 | -8.615850e-47 |
| Msa0113970 | Msa0667050 | 0.805993 | 1.020855e-49 | -8.615850e-47 |
| Msa0113970 | Msa0677270 | 0.802151 | 6.427734e-49 | -8.615850e-47 |
| Msa0113970 | Msa0679710 | 0.807414 | 5.113409e-50 | -8.615850e-47 |
| Msa0113970 | Msa0682900 | 0.818586 | 1.814526e-52 | -8.615850e-47 |
| Msa0113970 | Msa0688480 | 0.806813 | 6.855338e-50 | -8.615850e-47 |
| Msa0113970 | Msa0692840 | 0.809173 | 2.156824e-50 | -8.615850e-47 |
| Msa0113970 | Msa0693380 | 0.839611 | 1.428405e-57 | -8.615850e-47 |
| Msa0113970 | Msa0696640 | 0.809474 | 1.858367e-50 | -8.615850e-47 |
| Msa0113970 | Msa0698060 | 0.805792 | 1.124965e-49 | -8.615850e-47 |
| Msa0113970 | Msa0703230 | 0.849713 | 2.710311e-60 | -8.615850e-47 |
| Msa0113970 | Msa0708520 | 0.828949 | 6.763542e-55 | -8.615850e-47 |
| Msa0113970 | Msa0709500 | 0.809919 | 1.491240e-50 | -8.615850e-47 |
| Msa0113970 | Msa0711780 | 0.802818 | 4.684717e-49 | -8.615850e-47 |
| Msa0113970 | Msa0720820 | 0.824691 | 7.036421e-54 | -8.615850e-47 |
| Msa0113970 | Msa0724830 | 0.829250 | 5.716929e-55 | -8.615850e-47 |
| Msa0113970 | Msa0726080 | 0.800485 | 1.409585e-48 | -8.615850e-47 |
| Msa0113970 | Msa0741900 | 0.800596 | 1.338525e-48 | -8.615850e-47 |
| Msa0113970 | Msa0742380 | 0.835505 | 1.613520e-56 | -8.615850e-47 |
| Msa0113970 | Msa0742390 | 0.811845 | 5.709309e-51 | -8.615850e-47 |
| Msa0113970 | Msa0743200 | 0.801641 | 8.181437e-49 | -8.615850e-47 |
| Msa0113970 | Msa0743260 | 0.800505 | 1.396562e-48 | -8.615850e-47 |
| Msa0113970 | Msa0744040 | 0.818522 | 1.875854e-52 | -8.615850e-47 |
| Msa0113970 | Msa0750350 | 0.806591 | 7.635676e-50 | -8.615850e-47 |
| Msa0113970 | Msa0750430 | 0.802559 | 5.297698e-49 | -8.615850e-47 |
| Msa0113970 | Msa0750880 | 0.857544 | 1.518788e-62 | -8.615850e-47 |
| Msa0113970 | Msa0756630 | -0.807296 | 5.417080e-50 | -8.615850e-47 |
| Msa0113970 | Msa0761940 | 0.822260 | 2.604761e-53 | -8.615850e-47 |
| Msa0113970 | Msa0765380 | 0.800245 | 1.578009e-48 | -8.615850e-47 |
| Msa0113970 | Msa0777230 | 0.802120 | 6.522163e-49 | -8.615850e-47 |
| Msa0113970 | Msa0777990 | 0.801361 | 9.337040e-49 | -8.615850e-47 |
| Msa0113970 | Msa0787260 | 0.811884 | 5.598589e-51 | -8.615850e-47 |
| Msa0113970 | Msa0790390 | -0.805922 | 1.056335e-49 | -8.615850e-47 |
| Msa0113970 | Msa0790850 | 0.804754 | 1.856083e-49 | -8.615850e-47 |
| Msa0113970 | Msa0794510 | -0.810239 | 1.272545e-50 | -8.615850e-47 |
| Msa0113970 | Msa0794670 | 0.803651 | 3.148968e-49 | -8.615850e-47 |
| Msa0113970 | Msa0803890 | 0.824315 | 8.628139e-54 | -8.615850e-47 |
| Msa0113970 | Msa0808270 | 0.806266 | 8.940173e-50 | -8.615850e-47 |
| Msa0113970 | Msa0820770 | 0.805895 | 1.070269e-49 | -8.615850e-47 |
| Msa0113970 | Msa0822990 | 0.807554 | 4.776833e-50 | -8.615850e-47 |
| Msa0113970 | Msa0824660 | 0.819492 | 1.128740e-52 | -8.615850e-47 |
| Msa0113970 | Msa0827780 | 0.800692 | 1.278955e-48 | -8.615850e-47 |
| Msa0113970 | Msa0841940 | 0.825088 | 5.670642e-54 | -8.615850e-47 |
| Msa0113970 | Msa0849200 | 0.810149 | 1.330501e-50 | -8.615850e-47 |
| Msa0113970 | Msa0850960 | 0.803018 | 4.258546e-49 | -8.615850e-47 |
| Msa0113970 | Msa0861090 | 0.800996 | 1.108741e-48 | -8.615850e-47 |
| Msa0113970 | Msa0863370 | 0.807689 | 4.471855e-50 | -8.615850e-47 |
| Msa0113970 | Msa0863930 | 0.804158 | 2.470561e-49 | -8.615850e-47 |
| Msa0113970 | Msa0869100 | 0.800030 | 1.744439e-48 | -8.615850e-47 |
| Msa0113970 | Msa0871270 | 0.805830 | 1.104497e-49 | -8.615850e-47 |
| Msa0113970 | Msa0876200 | 0.838033 | 3.656764e-57 | -8.615850e-47 |
| Msa0113970 | Msa0876580 | 0.810140 | 1.336279e-50 | -8.615850e-47 |
| Msa0113970 | Msa0880140 | 0.812378 | 4.368578e-51 | -8.615850e-47 |
| Msa0113970 | Msa0881020 | 0.801202 | 1.006250e-48 | -8.615850e-47 |
| Msa0113970 | Msa0902760 | 0.826696 | 2.354565e-54 | -8.615850e-47 |
| Msa0113970 | Msa0910980 | -0.800582 | 1.347240e-48 | -8.615850e-47 |
| Msa0113970 | Msa0933230 | 0.810228 | 1.279330e-50 | -8.615850e-47 |
| Msa0113970 | Msa0938220 | 0.803501 | 3.383297e-49 | -8.615850e-47 |
| Msa0113970 | Msa0954550 | 0.803190 | 3.922995e-49 | -8.615850e-47 |
| Msa0113970 | Msa0968590 | 0.817972 | 2.498825e-52 | -8.615850e-47 |
| Msa0113970 | Msa0979010 | 0.803899 | 2.797344e-49 | -8.615850e-47 |
| Msa0113970 | Msa1010350 | 0.800135 | 1.660731e-48 | -8.615850e-47 |
| Msa0113970 | Msa1012370 | 0.802136 | 6.473967e-49 | -8.615850e-47 |
| Msa0113970 | Msa1013400 | 0.835303 | 1.815232e-56 | -8.615850e-47 |
| Msa0113970 | Msa1014540 | 0.813129 | 2.992229e-51 | -8.615850e-47 |
| Msa0113970 | Msa1027630 | 0.806777 | 6.974811e-50 | -8.615850e-47 |
| Msa0113970 | Msa1040400 | 0.801178 | 1.017960e-48 | -8.615850e-47 |
| Msa0113970 | Msa1040890 | 0.818926 | 1.518587e-52 | -8.615850e-47 |
| Msa0113970 | Msa1043390 | 0.823683 | 1.214140e-53 | -8.615850e-47 |
| Msa0113970 | Msa1043450 | 0.828423 | 9.066041e-55 | -8.615850e-47 |
| Msa0113970 | Msa1045200 | 0.825739 | 3.977597e-54 | -8.615850e-47 |
| Msa0113970 | Msa1046300 | 0.804960 | 1.680495e-49 | -8.615850e-47 |
| Msa0113970 | Msa1081150 | 0.821557 | 3.789857e-53 | -8.615850e-47 |
| Msa0113970 | Msa1082500 | 0.842625 | 2.306705e-58 | -8.615850e-47 |
| Msa0113970 | Msa1083210 | 0.830758 | 2.452483e-55 | -8.615850e-47 |
| Msa0113970 | Msa1085200 | 0.822943 | 1.807630e-53 | -8.615850e-47 |
| Msa0113970 | Msa1093530 | 0.825913 | 3.615764e-54 | -8.615850e-47 |
| Msa0113970 | Msa1100720 | 0.807963 | 3.910328e-50 | -8.615850e-47 |
| Msa0113970 | Msa1108160 | 0.800049 | 1.729587e-48 | -8.615850e-47 |
| Msa0113970 | Msa1117170 | 0.806709 | 7.210917e-50 | -8.615850e-47 |
| Msa0113970 | Msa1119500 | 0.802108 | 6.560467e-49 | -8.615850e-47 |
| Msa0113970 | Msa1119540 | 0.803017 | 4.260775e-49 | -8.615850e-47 |
| Msa0113970 | Msa1125760 | 0.810185 | 1.306985e-50 | -8.615850e-47 |
| Msa0113970 | Msa1127830 | 0.800853 | 1.186240e-48 | -8.615850e-47 |
| Msa0113970 | Msa1127890 | 0.843174 | 1.648320e-58 | -8.615850e-47 |
| Msa0113970 | Msa1131220 | 0.804687 | 1.916594e-49 | -8.615850e-47 |
| Msa0113970 | Msa1147900 | 0.814395 | 1.574451e-51 | -8.615850e-47 |
| Msa0113970 | Msa1165870 | 0.817880 | 2.621128e-52 | -8.615850e-47 |
| Msa0113970 | Msa1168160 | 0.813114 | 3.015698e-51 | -8.615850e-47 |
| Msa0113970 | Msa1171360 | 0.810159 | 1.324292e-50 | -8.615850e-47 |
| Msa0113970 | Msa1172670 | 0.843031 | 1.798801e-58 | -8.615850e-47 |
| Msa0113970 | Msa1178170 | 0.810221 | 1.283557e-50 | -8.615850e-47 |
| Msa0113970 | Msa1187840 | 0.808034 | 3.776666e-50 | -8.615850e-47 |
| Msa0113970 | Msa1199560 | 0.820055 | 8.396307e-53 | -8.615850e-47 |
| Msa0113970 | Msa1214880 | 0.806201 | 9.230197e-50 | -8.615850e-47 |
| Msa0113970 | Msa1214890 | 0.821787 | 3.352790e-53 | -8.615850e-47 |
| Msa0113970 | Msa1218600 | 0.829302 | 5.555006e-55 | -8.615850e-47 |
| Msa0113970 | Msa1227400 | 0.831740 | 1.406801e-55 | -8.615850e-47 |
| Msa0113970 | Msa1233500 | 0.810072 | 1.382619e-50 | -8.615850e-47 |
| Msa0113970 | Msa1233890 | 0.831619 | 1.506748e-55 | -8.615850e-47 |
| Msa0113970 | Msa1254710 | 0.816169 | 6.351624e-52 | -8.615850e-47 |
| Msa0113970 | Msa1255040 | -0.832110 | 1.139814e-55 | -8.615850e-47 |
| Msa0113970 | Msa1279210 | 0.801359 | 9.345365e-49 | -8.615850e-47 |
| Msa0113970 | Msa1283170 | 0.822529 | 2.256388e-53 | -8.615850e-47 |
| Msa0113970 | Msa1288420 | 0.816107 | 6.556833e-52 | -8.615850e-47 |
| Msa0113970 | Msa1296760 | 0.808620 | 2.831502e-50 | -8.615850e-47 |
| Msa0113970 | Msa1300870 | 0.803909 | 2.783046e-49 | -8.615850e-47 |
| Msa0113970 | Msa1303250 | 0.816962 | 4.219008e-52 | -8.615850e-47 |
| Msa0113970 | Msa1305340 | 0.802727 | 4.890429e-49 | -8.615850e-47 |
| Msa0113970 | Msa1306840 | 0.838405 | 2.932416e-57 | -8.615850e-47 |
| Msa0113970 | Msa1316780 | 0.831131 | 1.986267e-55 | -8.615850e-47 |
| Msa0113970 | Msa1316830 | 0.833063 | 6.611892e-56 | -8.615850e-47 |
| Msa0113970 | Msa1328700 | 0.812837 | 3.467774e-51 | -8.615850e-47 |
| Msa0113970 | Msa1329700 | 0.809228 | 2.099026e-50 | -8.615850e-47 |
| Msa0113970 | Msa1331910 | 0.805776 | 1.133750e-49 | -8.615850e-47 |
| Msa0113970 | Msa1331920 | 0.800046 | 1.731628e-48 | -8.615850e-47 |
| Msa0113970 | Msa1336710 | 0.826528 | 2.581364e-54 | -8.615850e-47 |
| Msa0113970 | Msa1340650 | 0.820312 | 7.331788e-53 | -8.615850e-47 |
| Msa0113970 | Msa1343070 | 0.800075 | 1.708574e-48 | -8.615850e-47 |
| Msa0113970 | Msa1353060 | 0.860828 | 1.572677e-63 | -8.615850e-47 |
| Msa0113970 | Msa1359040 | 0.804694 | 1.910306e-49 | -8.615850e-47 |
| Msa0113970 | Msa1367880 | 0.800567 | 1.356427e-48 | -8.615850e-47 |
| Msa0113970 | Msa1372760 | 0.808595 | 2.866810e-50 | -8.615850e-47 |
| Msa0113970 | Msa1385670 | 0.803295 | 3.731938e-49 | -8.615850e-47 |
| Msa0113970 | Msa1386230 | 0.816805 | 4.576670e-52 | -8.615850e-47 |
| Msa0113970 | Msa1389400 | 0.803102 | 4.091029e-49 | -8.615850e-47 |
| Msa0113970 | Msa1403580 | -0.822330 | 2.510109e-53 | -8.615850e-47 |
| Msa0113970 | Msa1409870 | 0.834949 | 2.229525e-56 | -8.615850e-47 |
| Msa0113970 | Msa1411020 | 0.807369 | 5.227257e-50 | -8.615850e-47 |
| Msa0113970 | Msa1423350 | 0.803294 | 3.733756e-49 | -8.615850e-47 |
| Msa0113970 | Msa1424290 | 0.805220 | 1.482694e-49 | -8.615850e-47 |
| Msa0113970 | Msa1424450 | 0.816564 | 5.181379e-52 | -8.615850e-47 |
| Msa0113970 | Msa1426030 | 0.805874 | 1.081432e-49 | -8.615850e-47 |
| Msa0113970 | Msa1427060 | 0.841388 | 4.897472e-58 | -8.615850e-47 |
| Msa0113970 | Msa1434350 | 0.802290 | 6.019181e-49 | -8.615850e-47 |
| Msa0113970 | Msa1439320 | 0.803570 | 3.273515e-49 | -8.615850e-47 |
| Msa0113970 | Msa1443290 | -0.819086 | 1.396994e-52 | -8.615850e-47 |
| Msa0113970 | Msa1452120 | 0.805919 | 1.057975e-49 | -8.615850e-47 |
| Msa0113970 | Msa1457910 | 0.816636 | 4.992727e-52 | -8.615850e-47 |
| Msa0113970 | Msa1460020 | 0.811527 | 6.695513e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113970 | MtrunA17_Chr1g0172941 | 97.414 | 116 | 3 | 0 | 1 | 116 | 1 | 116 | 1.10e-74 | 216 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113970 | AT3G57320.1 | 50.000 | 96 | 47 | 1 | 8 | 102 | 5 | 100 | 3.02e-22 | 84.3 |
Find 27 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAAATAGGTCAAGTAATA+TGG | 0.170369 | 1_3:-30329277 | Msa0113970:five_prime_UTR |
| TTTGGAATGAAACTAATTTA+AGG | 0.180020 | 1_3:+30325719 | None:intergenic |
| TCTTCGATAGAAAGGCTTTA+AGG | 0.224574 | 1_3:+30329119 | None:intergenic |
| CGAAATCTGTTTGGCCTTGC+TGG | 0.272167 | 1_3:-30325828 | Msa0113970:three_prime_UTR |
| GATGTTAGTGCAGATTAGTT+AGG | 0.427109 | 1_3:+30329230 | None:intergenic |
| TTGATGATACGAAATCTGTT+TGG | 0.432468 | 1_3:-30325837 | Msa0113970:three_prime_UTR |
| ATAGTGCAAATATTCTAAAT+AGG | 0.432995 | 1_3:-30329290 | Msa0113970:five_prime_UTR |
| ACGGAGGGAGTAATAAATAT+AGG | 0.454550 | 1_3:-30329253 | Msa0113970:five_prime_UTR |
| TCAGAAGCTCTTCGATAGAA+AGG | 0.463559 | 1_3:+30329111 | None:intergenic |
| GCTGCCATCAATAGTAGAAA+AGG | 0.467186 | 1_3:-30327010 | Msa0113970:intron |
| CTAAATAGGTCAAGTAATAT+GGG | 0.468666 | 1_3:-30329276 | Msa0113970:five_prime_UTR |
| ATCGCAGAAGATGAATTATA+CGG | 0.472527 | 1_3:+30326678 | None:intergenic |
| CAATTAAATCACCATACACT+TGG | 0.491325 | 1_3:+30325755 | None:intergenic |
| AGACGGTACTTCCAAGTGTA+TGG | 0.498151 | 1_3:-30325766 | Msa0113970:three_prime_UTR |
| GGTCAAAGCACAGGAACAGC+TGG | 0.502758 | 1_3:-30325939 | Msa0113970:CDS |
| GTCTGTTAAAATAAACGAGT+TGG | 0.507951 | 1_3:-30329148 | Msa0113970:CDS |
| GAGGAATTTGTATCGAAGAA+TGG | 0.537737 | 1_3:-30329175 | Msa0113970:exon |
| GTCAAGTAATATGGGACGGA+GGG | 0.572651 | 1_3:-30329268 | Msa0113970:five_prime_UTR |
| AAGACTCAAAAGCAGAGAGA+AGG | 0.579421 | 1_3:-30329203 | Msa0113970:five_prime_UTR |
| TTGACCACAGGTCAAAGCAC+AGG | 0.579489 | 1_3:-30325948 | Msa0113970:intron |
| AAGCAGAGAGAAGGAAGCAG+AGG | 0.606587 | 1_3:-30329194 | Msa0113970:five_prime_UTR |
| GAATTTGTATCGAAGAATGG+TGG | 0.607570 | 1_3:-30329172 | Msa0113970:exon |
| GAGTGGGGAACAATTGAAAG+TGG | 0.620724 | 1_3:-30326879 | Msa0113970:CDS |
| TCGAAGAGCTTCTGAAGCTG+AGG | 0.630900 | 1_3:-30329103 | Msa0113970:intron |
| ATAGGTCAAGTAATATGGGA+CGG | 0.639119 | 1_3:-30329272 | Msa0113970:five_prime_UTR |
| GGTCAAGTAATATGGGACGG+AGG | 0.676234 | 1_3:-30329269 | Msa0113970:five_prime_UTR |
| CTATAGTGCTAAAACCAGCA+AGG | 0.685122 | 1_3:+30325814 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAAGAAATTATAAAATTA+AGG | - | chr1_3:30328668-30328687 | Msa0113970:intron | 10.0% |
| !!! | GTTTGTATTTTTATTTTTTT+TGG | - | chr1_3:30329143-30329162 | Msa0113970:CDS | 10.0% |
| !!! | TTTGTTTGGTTTAATTATTA+GGG | + | chr1_3:30326020-30326039 | None:intergenic | 15.0% |
| !!! | TATTTGGTAAGTAATTTTTT+TGG | - | chr1_3:30326755-30326774 | Msa0113970:intron | 15.0% |
| !!! | ATACATTTAATTTTTTGCAA+CGG | - | chr1_3:30328251-30328270 | Msa0113970:intron | 15.0% |
| !! | AAAATCAAATAATTGGTAAA+AGG | + | chr1_3:30328284-30328303 | None:intergenic | 15.0% |
| !! | ACAATTCATTTATCTAATTT+GGG | + | chr1_3:30328569-30328588 | None:intergenic | 15.0% |
| !! | AACAATTCATTTATCTAATT+TGG | + | chr1_3:30328570-30328589 | None:intergenic | 15.0% |
| !!! | ATTAGATAAATGAATTGTTT+TGG | - | chr1_3:30328571-30328590 | Msa0113970:intron | 15.0% |
| !!! | TTAGATAAATGAATTGTTTT+GGG | - | chr1_3:30328572-30328591 | Msa0113970:intron | 15.0% |
| !!! | TAAAATTAACTTTATTTGCA+GGG | + | chr1_3:30328750-30328769 | None:intergenic | 15.0% |
| !!! | ATAAAATTAACTTTATTTGC+AGG | + | chr1_3:30328751-30328770 | None:intergenic | 15.0% |
| !!! | TAACATTTTAAATCTTACAT+GGG | + | chr1_3:30328871-30328890 | None:intergenic | 15.0% |
| !!! | TTTTTTATTGCAAAAATAGA+CGG | - | chr1_3:30329240-30329259 | Msa0113970:five_prime_UTR | 15.0% |
| !! | ATAGTGCAAATATTCTAAAT+AGG | - | chr1_3:30325733-30325752 | Msa0113970:three_prime_UTR | 20.0% |
| !! | ATTATTAGGGTATATATGAA+GGG | + | chr1_3:30326007-30326026 | None:intergenic | 20.0% |
| !! | AATTATTAGGGTATATATGA+AGG | + | chr1_3:30326008-30326027 | None:intergenic | 20.0% |
| !!! | GTTTGTTTGGTTTAATTATT+AGG | + | chr1_3:30326021-30326040 | None:intergenic | 20.0% |
| !! | AGAGATATATAGATAAATTG+AGG | - | chr1_3:30326240-30326259 | Msa0113970:intron | 20.0% |
| !! | TTTCAAATTATTATCCATGT+TGG | + | chr1_3:30326326-30326345 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTGTGTTAGAAA+GGG | + | chr1_3:30326615-30326634 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTTGTGTTAGAA+AGG | + | chr1_3:30326616-30326635 | None:intergenic | 20.0% |
| !!! | AAATTAATGCTTTTGATTGA+TGG | - | chr1_3:30326636-30326655 | Msa0113970:intron | 20.0% |
| !! | TAGTGTACATTAAAAATAGA+TGG | + | chr1_3:30326706-30326725 | None:intergenic | 20.0% |
| !! | AATAAAGTTTGAGTATTATC+AGG | - | chr1_3:30326727-30326746 | Msa0113970:intron | 20.0% |
| !! | AAATTTCTTTACAAAACACT+TGG | - | chr1_3:30327533-30327552 | Msa0113970:intron | 20.0% |
| !!! | TTCTTACCACTTAATATTTT+AGG | - | chr1_3:30327970-30327989 | Msa0113970:intron | 20.0% |
| !!! | TACATTTAATTTTTTGCAAC+GGG | - | chr1_3:30328252-30328271 | Msa0113970:intron | 20.0% |
| !!! | TTACCAATTATTTGATTTTC+AGG | - | chr1_3:30328285-30328304 | Msa0113970:intron | 20.0% |
| !!! | TTGTACCACATTTTTAAAAA+AGG | - | chr1_3:30328772-30328791 | Msa0113970:intron | 20.0% |
| !!! | GAATACCTTTTTTAAAAATG+TGG | + | chr1_3:30328780-30328799 | None:intergenic | 20.0% |
| !!! | CTAACATTTTAAATCTTACA+TGG | + | chr1_3:30328872-30328891 | None:intergenic | 20.0% |
| !!! | TTTGGAATGAAACTAATTTA+AGG | + | chr1_3:30329307-30329326 | None:intergenic | 20.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | - | chr1_3:30325746-30325765 | Msa0113970:three_prime_UTR | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | - | chr1_3:30325747-30325766 | Msa0113970:three_prime_UTR | 25.0% |
| !!! | GTTATTTTGATGCTATGAAA+TGG | + | chr1_3:30326149-30326168 | None:intergenic | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | - | chr1_3:30326352-30326371 | Msa0113970:intron | 25.0% |
| ! | AAAACTTGAGTTTGATTACT+TGG | - | chr1_3:30326531-30326550 | Msa0113970:intron | 25.0% |
| ! | GTATTATCAGGTATGATATT+TGG | - | chr1_3:30326739-30326758 | Msa0113970:intron | 25.0% |
| ! | TATATTCATTTCAGTATGTG+TGG | + | chr1_3:30327388-30327407 | None:intergenic | 25.0% |
| ! | ACTGAAATGAATATACAAAC+CGG | - | chr1_3:30327393-30327412 | Msa0113970:intron | 25.0% |
| !!! | GAAATTTGCAAGTTTGTTAA+AGG | + | chr1_3:30327520-30327539 | None:intergenic | 25.0% |
| ! | TTGGATAGTATCAAAGAAAA+TGG | + | chr1_3:30327567-30327586 | None:intergenic | 25.0% |
| ! | GGTTAAACTCTTGTATATAA+AGG | - | chr1_3:30327725-30327744 | Msa0113970:intron | 25.0% |
| !!! | CGTTTTAATTGACAACAAAA+TGG | + | chr1_3:30327835-30327854 | None:intergenic | 25.0% |
| ! | TTGTATAAGTGAGTTACTAA+AGG | - | chr1_3:30327934-30327953 | Msa0113970:intron | 25.0% |
| !! | TAGTCTTTTCAAATTGAAGT+TGG | - | chr1_3:30328067-30328086 | Msa0113970:intron | 25.0% |
| ! | GTTAATTTCAGAAAAACGAA+AGG | - | chr1_3:30328207-30328226 | Msa0113970:intron | 25.0% |
| !!! | TGTTGCTTTAATTCCAAAAT+CGG | - | chr1_3:30328630-30328649 | Msa0113970:intron | 25.0% |
| !!! | AAAAAAGGTATTCGTAAACA+AGG | - | chr1_3:30328787-30328806 | Msa0113970:intron | 25.0% |
| ! | TTATCAGACACAAACTAATA+TGG | - | chr1_3:30328824-30328843 | Msa0113970:intron | 25.0% |
| !!! | AACTTATTGTGCCATTTTTT+GGG | - | chr1_3:30328984-30329003 | Msa0113970:intron | 25.0% |
| GTCTGTTAAAATAAACGAGT+TGG | - | chr1_3:30325875-30325894 | Msa0113970:three_prime_UTR | 30.0% | |
| TCGTATCACATCTATCAAAT+GGG | + | chr1_3:30326204-30326223 | None:intergenic | 30.0% | |
| ATCGTATCACATCTATCAAA+TGG | + | chr1_3:30326205-30326224 | None:intergenic | 30.0% | |
| GTTATGTGGAACATGATATT+TGG | + | chr1_3:30326468-30326487 | None:intergenic | 30.0% | |
| ! | AAGTTTTACTGTCCTATTGA+TGG | + | chr1_3:30326518-30326537 | None:intergenic | 30.0% |
| AATAGATGGAATGTTGAAGT+AGG | + | chr1_3:30326692-30326711 | None:intergenic | 30.0% | |
| ACAAAGTTCAGTTTCACATA+AGG | + | chr1_3:30326802-30326821 | None:intergenic | 30.0% | |
| CAAAGGAAATAGAATGTGTA+GGG | + | chr1_3:30326896-30326915 | None:intergenic | 30.0% | |
| !! | AACCTTTGGAATAAAAGGTT+TGG | - | chr1_3:30326985-30327004 | Msa0113970:intron | 30.0% |
| !! | ACCTTTGGAATAAAAGGTTT+GGG | - | chr1_3:30326986-30327005 | Msa0113970:intron | 30.0% |
| TTATTTGACAATTTGCCTAG+TGG | - | chr1_3:30327362-30327381 | Msa0113970:intron | 30.0% | |
| CTGAAATGAATATACAAACC+GGG | - | chr1_3:30327394-30327413 | Msa0113970:intron | 30.0% | |
| TGAAATGAATATACAAACCG+GGG | - | chr1_3:30327395-30327414 | Msa0113970:intron | 30.0% | |
| !! | ATTTGCAAGTTTGTTAAAGG+AGG | + | chr1_3:30327517-30327536 | None:intergenic | 30.0% |
| TTCTTTGATACTATCCAAAC+TGG | - | chr1_3:30327569-30327588 | Msa0113970:intron | 30.0% | |
| TCTTTGATACTATCCAAACT+GGG | - | chr1_3:30327570-30327589 | Msa0113970:intron | 30.0% | |
| !!! | CACTATTCAAGTTTGTTTTG+TGG | - | chr1_3:30327653-30327672 | Msa0113970:intron | 30.0% |
| ! | TTTTGTGCTACATGAAATGA+AGG | + | chr1_3:30327757-30327776 | None:intergenic | 30.0% |
| AGCGTTCCTAAAATATTAAG+TGG | + | chr1_3:30327979-30327998 | None:intergenic | 30.0% | |
| ! | CATACCTTTTCTACTATTGA+TGG | + | chr1_3:30328020-30328039 | None:intergenic | 30.0% |
| GTTTCAAAGACACGTAATTT+AGG | + | chr1_3:30328109-30328128 | None:intergenic | 30.0% | |
| GAGCCTGAAAATCAAATAAT+TGG | + | chr1_3:30328291-30328310 | None:intergenic | 30.0% | |
| !! | ATTATTTGATTTTCAGGCTC+AGG | - | chr1_3:30328291-30328310 | Msa0113970:intron | 30.0% |
| ATCGCAGAAGATGAATTATA+CGG | + | chr1_3:30328348-30328367 | None:intergenic | 30.0% | |
| TTAGAGCAAGTTAGTATTTC+TGG | - | chr1_3:30328391-30328410 | Msa0113970:intron | 30.0% | |
| ! | CAGATACTTTGAGAATTGAA+AGG | + | chr1_3:30328421-30328440 | None:intergenic | 30.0% |
| ! | TCTGAAAAGTCTCTGAAAAA+TGG | - | chr1_3:30328494-30328513 | Msa0113970:intron | 30.0% |
| ! | TTTGTTGTCGTAGAGTAATT+CGG | - | chr1_3:30328526-30328545 | Msa0113970:intron | 30.0% |
| !!! | AATTGTTTTGGGTACACTTT+TGG | - | chr1_3:30328583-30328602 | Msa0113970:intron | 30.0% |
| GACATGTAGAAAATTTAGAC+AGG | - | chr1_3:30328690-30328709 | Msa0113970:intron | 30.0% | |
| AGGAATCATGTAATAGTGAA+CGG | - | chr1_3:30328710-30328729 | Msa0113970:intron | 30.0% | |
| TTAAATCTTACATGGGAAAC+TGG | + | chr1_3:30328864-30328883 | None:intergenic | 30.0% | |
| TAGCCAATAGAATGTAAGTT+AGG | - | chr1_3:30328889-30328908 | Msa0113970:intron | 30.0% | |
| AAGCCTAACTTACATTCTAT+TGG | + | chr1_3:30328895-30328914 | None:intergenic | 30.0% | |
| AAATCTGGTAAACAGATACA+GGG | + | chr1_3:30328918-30328937 | None:intergenic | 30.0% | |
| AAAATCTGGTAAACAGATAC+AGG | + | chr1_3:30328919-30328938 | None:intergenic | 30.0% | |
| AATTCATCGAAGCTAAAATC+TGG | + | chr1_3:30328933-30328952 | None:intergenic | 30.0% | |
| !!! | GAACTTATTGTGCCATTTTT+TGG | - | chr1_3:30328983-30329002 | Msa0113970:intron | 30.0% |
| !!! | ACTTATTGTGCCATTTTTTG+GGG | - | chr1_3:30328985-30329004 | Msa0113970:intron | 30.0% |
| AAATTGTGTTCCCCAAAAAA+TGG | + | chr1_3:30328998-30329017 | None:intergenic | 30.0% | |
| TTATTTCATTTCTTGACCAC+AGG | - | chr1_3:30329063-30329082 | Msa0113970:intron | 30.0% | |
| ! | TTGATGATACGAAATCTGTT+TGG | - | chr1_3:30329186-30329205 | Msa0113970:five_prime_UTR | 30.0% |
| CAATTAAATCACCATACACT+TGG | + | chr1_3:30329271-30329290 | None:intergenic | 30.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | - | chr1_3:30325751-30325770 | Msa0113970:three_prime_UTR | 35.0% | |
| ACGGAGGGAGTAATAAATAT+AGG | - | chr1_3:30325770-30325789 | Msa0113970:three_prime_UTR | 35.0% | |
| ! | GATGTTAGTGCAGATTAGTT+AGG | + | chr1_3:30325796-30325815 | None:intergenic | 35.0% |
| GAGGAATTTGTATCGAAGAA+TGG | - | chr1_3:30325848-30325867 | Msa0113970:three_prime_UTR | 35.0% | |
| GAATTTGTATCGAAGAATGG+TGG | - | chr1_3:30325851-30325870 | Msa0113970:three_prime_UTR | 35.0% | |
| TCTTCGATAGAAAGGCTTTA+AGG | + | chr1_3:30325907-30325926 | None:intergenic | 35.0% | |
| ! | GAAGAAATGAAGGGTTTGTT+TGG | + | chr1_3:30326034-30326053 | None:intergenic | 35.0% |
| CGTATCACATCTATCAAATG+GGG | + | chr1_3:30326203-30326222 | None:intergenic | 35.0% | |
| ! | TGATACGATGATGATGTGAT+AGG | - | chr1_3:30326216-30326235 | Msa0113970:intron | 35.0% |
| TCAATGAGTGTATGGAAAAG+TGG | - | chr1_3:30326266-30326285 | Msa0113970:intron | 35.0% | |
| CAATGAGTGTATGGAAAAGT+GGG | - | chr1_3:30326267-30326286 | Msa0113970:intron | 35.0% | |
| ATCATGTTCCACATAACAGT+TGG | - | chr1_3:30326471-30326490 | Msa0113970:intron | 35.0% | |
| ! | TTTGAGTTCCAACTGTTATG+TGG | + | chr1_3:30326482-30326501 | None:intergenic | 35.0% |
| GAATAATGAGCTCCATCAAT+AGG | - | chr1_3:30326503-30326522 | Msa0113970:intron | 35.0% | |
| ACTTGAGTTTGATTACTTGG+TGG | - | chr1_3:30326534-30326553 | Msa0113970:intron | 35.0% | |
| CTTGAGTTTGATTACTTGGT+GGG | - | chr1_3:30326535-30326554 | Msa0113970:intron | 35.0% | |
| ATGTTGAAGTAGGAGGAAAA+GGG | + | chr1_3:30326682-30326701 | None:intergenic | 35.0% | |
| AATGTTGAAGTAGGAGGAAA+AGG | + | chr1_3:30326683-30326702 | None:intergenic | 35.0% | |
| AGTTCAGTTTCACATAAGGT+AGG | + | chr1_3:30326798-30326817 | None:intergenic | 35.0% | |
| GCAAAGGAAATAGAATGTGT+AGG | + | chr1_3:30326897-30326916 | None:intergenic | 35.0% | |
| ATTTCCTTTGCTTGTCTATG+TGG | - | chr1_3:30326906-30326925 | Msa0113970:intron | 35.0% | |
| CTTGTCTATGTGGATGATTA+CGG | - | chr1_3:30326916-30326935 | Msa0113970:intron | 35.0% | |
| TTGTCTATGTGGATGATTAC+GGG | - | chr1_3:30326917-30326936 | Msa0113970:intron | 35.0% | |
| AGATTTCTTCACTCAACCTT+TGG | - | chr1_3:30326971-30326990 | Msa0113970:intron | 35.0% | |
| !! | CACTCAACCTTTGGAATAAA+AGG | - | chr1_3:30326980-30326999 | Msa0113970:intron | 35.0% |
| ! | ACCCAAACCTTTTATTCCAA+AGG | + | chr1_3:30326990-30327009 | None:intergenic | 35.0% |
| ! | TTTGGAATAAAAGGTTTGGG+TGG | - | chr1_3:30326989-30327008 | Msa0113970:intron | 35.0% |
| AAGACCTATTGGACAAGAAA+AGG | + | chr1_3:30327060-30327079 | None:intergenic | 35.0% | |
| CTGATAGATGTTTGAGTGTT+GGG | + | chr1_3:30327088-30327107 | None:intergenic | 35.0% | |
| ACTGATAGATGTTTGAGTGT+TGG | + | chr1_3:30327089-30327108 | None:intergenic | 35.0% | |
| ! | CTATGATCTTCACTGTTTCT+TGG | - | chr1_3:30327124-30327143 | Msa0113970:intron | 35.0% |
| TTCCGCTTCAAAGGAAAAAT+GGG | + | chr1_3:30327175-30327194 | None:intergenic | 35.0% | |
| ATTCCGCTTCAAAGGAAAAA+TGG | + | chr1_3:30327176-30327195 | None:intergenic | 35.0% | |
| ! | AAGAGTACAAGTGCAGTAAA+GGG | + | chr1_3:30327267-30327286 | None:intergenic | 35.0% |
| CTCATGAAAACTTGAGTTTG+AGG | + | chr1_3:30327322-30327341 | None:intergenic | 35.0% | |
| TCAGAGAAAAGCTTCAATCT+CGG | - | chr1_3:30327469-30327488 | Msa0113970:intron | 35.0% | |
| AGTATCAAAGAAAATGGTGC+TGG | + | chr1_3:30327561-30327580 | None:intergenic | 35.0% | |
| AACATACACTCTCCAACTTA+AGG | - | chr1_3:30327600-30327619 | Msa0113970:intron | 35.0% | |
| !!! | CAAGTTTGTTTTGTGGTTAG+TGG | - | chr1_3:30327660-30327679 | Msa0113970:intron | 35.0% |
| TAACAAGTTCACATGGACAT+AGG | + | chr1_3:30327868-30327887 | None:intergenic | 35.0% | |
| ! | AGAGCTTTAACAAGTTCACA+TGG | + | chr1_3:30327875-30327894 | None:intergenic | 35.0% |
| ! | TAGAAAAGGTATGTACTGAG+AGG | - | chr1_3:30328027-30328046 | Msa0113970:intron | 35.0% |
| ! | AAGTTGGTTCTTGATGCTAT+GGG | - | chr1_3:30328083-30328102 | Msa0113970:intron | 35.0% |
| !!! | ACTTTTTCAGATACTGAGAG+TGG | - | chr1_3:30328127-30328146 | Msa0113970:intron | 35.0% |
| !!! | CTTTTTCAGATACTGAGAGT+GGG | - | chr1_3:30328128-30328147 | Msa0113970:intron | 35.0% |
| !! | TTTTTCAGATACTGAGAGTG+GGG | - | chr1_3:30328129-30328148 | Msa0113970:intron | 35.0% |
| ATAGTATGCGTTATCAGAGT+AGG | - | chr1_3:30328465-30328484 | Msa0113970:intron | 35.0% | |
| !!! | AACAGATAGAATGCCGATTT+TGG | + | chr1_3:30328646-30328665 | None:intergenic | 35.0% |
| GTTATGTGAAATGTGACACA+TGG | - | chr1_3:30329029-30329048 | Msa0113970:intron | 35.0% | |
| AAGACTCAAAAGCAGAGAGA+AGG | - | chr1_3:30325820-30325839 | Msa0113970:three_prime_UTR | 40.0% | |
| TCAGAAGCTCTTCGATAGAA+AGG | + | chr1_3:30325915-30325934 | None:intergenic | 40.0% | |
| GGTATATATGAAGGGCAAAG+CGG | + | chr1_3:30325999-30326018 | None:intergenic | 40.0% | |
| CCACGATTGGAAGAAATGAA+GGG | + | chr1_3:30326043-30326062 | None:intergenic | 40.0% | |
| ACCACGATTGGAAGAAATGA+AGG | + | chr1_3:30326044-30326063 | None:intergenic | 40.0% | |
| ACATGAGTAGTAACCACGAT+TGG | + | chr1_3:30326056-30326075 | None:intergenic | 40.0% | |
| CCATAAAAGCAGCAGAAAAG+TGG | + | chr1_3:30326089-30326108 | None:intergenic | 40.0% | |
| !!! | CCACTTTTCTGCTGCTTTTA+TGG | - | chr1_3:30326086-30326105 | Msa0113970:intron | 40.0% |
| ! | TTTTATGGACTCACTGCTGT+TGG | - | chr1_3:30326101-30326120 | Msa0113970:intron | 40.0% |
| ! | TGAGGTGTTCAATGAGTGTA+TGG | - | chr1_3:30326258-30326277 | Msa0113970:intron | 40.0% |
| ACTACCTCTGGATTGAACTT+CGG | - | chr1_3:30326579-30326598 | Msa0113970:intron | 40.0% | |
| TAATCCGAAGTTCAATCCAG+AGG | + | chr1_3:30326586-30326605 | None:intergenic | 40.0% | |
| ! | AGGAGGAAAAGGGGTTATTT+TGG | + | chr1_3:30326672-30326691 | None:intergenic | 40.0% |
| TGTTGAAGTAGGAGGAAAAG+GGG | + | chr1_3:30326681-30326700 | None:intergenic | 40.0% | |
| AGATGGAATGTTGAAGTAGG+AGG | + | chr1_3:30326689-30326708 | None:intergenic | 40.0% | |
| ! | TCACATAAGGTAGGTTGGAT+TGG | + | chr1_3:30326789-30326808 | None:intergenic | 40.0% |
| CAGTTTCACATAAGGTAGGT+TGG | + | chr1_3:30326794-30326813 | None:intergenic | 40.0% | |
| TCATCCACATAGACAAGCAA+AGG | + | chr1_3:30326913-30326932 | None:intergenic | 40.0% | |
| TGTCTATGTGGATGATTACG+GGG | - | chr1_3:30326918-30326937 | Msa0113970:intron | 40.0% | |
| TCCGCTTCAAAGGAAAAATG+GGG | + | chr1_3:30327174-30327193 | None:intergenic | 40.0% | |
| AGTGTGATATTCCGCTTCAA+AGG | + | chr1_3:30327184-30327203 | None:intergenic | 40.0% | |
| TAAAGGGAACAACAAGTTCC+TGG | + | chr1_3:30327251-30327270 | None:intergenic | 40.0% | |
| ! | CAAGAGTACAAGTGCAGTAA+AGG | + | chr1_3:30327268-30327287 | None:intergenic | 40.0% |
| AATGAATATACAAACCGGGG+AGG | - | chr1_3:30327398-30327417 | Msa0113970:intron | 40.0% | |
| ATGAATATACAAACCGGGGA+GGG | - | chr1_3:30327399-30327418 | Msa0113970:intron | 40.0% | |
| ! | GTTTGTTAAAGGAGGAAGCT+GGG | + | chr1_3:30327509-30327528 | None:intergenic | 40.0% |
| !! | AGTTTGTTAAAGGAGGAAGC+TGG | + | chr1_3:30327510-30327529 | None:intergenic | 40.0% |
| TATGTTTAACACGCCCAGTT+TGG | + | chr1_3:30327586-30327605 | None:intergenic | 40.0% | |
| ATACACTCTCCAACTTAAGG+AGG | - | chr1_3:30327603-30327622 | Msa0113970:intron | 40.0% | |
| TACACTCTCCAACTTAAGGA+GGG | - | chr1_3:30327604-30327623 | Msa0113970:intron | 40.0% | |
| ATCAATGTCACACTCGCTAA+AGG | + | chr1_3:30327804-30327823 | None:intergenic | 40.0% | |
| GCTGCCATCAATAGTAGAAA+AGG | - | chr1_3:30328013-30328032 | Msa0113970:intron | 40.0% | |
| ! | GAAGTTGGTTCTTGATGCTA+TGG | - | chr1_3:30328082-30328101 | Msa0113970:intron | 40.0% |
| GCTTCGATGAATTGTTATCC+AGG | - | chr1_3:30328940-30328959 | Msa0113970:intron | 40.0% | |
| CGATGAATTGTTATCCAGGA+TGG | - | chr1_3:30328944-30328963 | Msa0113970:intron | 40.0% | |
| ! | GCATTTTCACAAAACCATCC+TGG | + | chr1_3:30328961-30328980 | None:intergenic | 40.0% |
| CTATAGTGCTAAAACCAGCA+AGG | + | chr1_3:30329212-30329231 | None:intergenic | 40.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | chr1_3:30325755-30325774 | Msa0113970:three_prime_UTR | 45.0% | |
| CCCTTCATTTCTTCCAATCG+TGG | - | chr1_3:30326040-30326059 | Msa0113970:intron | 45.0% | |
| GACCCATCTTGACACTAACA+CGG | - | chr1_3:30326289-30326308 | Msa0113970:intron | 45.0% | |
| GTCCGTGTTAGTGTCAAGAT+GGG | + | chr1_3:30326294-30326313 | None:intergenic | 45.0% | |
| TGTCCGTGTTAGTGTCAAGA+TGG | + | chr1_3:30326295-30326314 | None:intergenic | 45.0% | |
| ! | TGTAATCATAGGCGTCGTGT+CGG | - | chr1_3:30326363-30326382 | Msa0113970:intron | 45.0% |
| CGTCAGACTTTAACTACCTC+TGG | - | chr1_3:30326567-30326586 | Msa0113970:intron | 45.0% | |
| AACTTTGTGTGACTCGCTCT+AGG | - | chr1_3:30326814-30326833 | Msa0113970:intron | 45.0% | |
| !! | TGACTCGCTCTAGGTTTTAG+TGG | - | chr1_3:30326823-30326842 | Msa0113970:CDS | 45.0% |
| GTCTATGTGGATGATTACGG+GGG | - | chr1_3:30326919-30326938 | Msa0113970:intron | 45.0% | |
| ACATAAAAGCTGCCCCTTCT+CGG | - | chr1_3:30327032-30327051 | Msa0113970:CDS | 45.0% | |
| ACAAGAAAAGGCTCCGAGAA+GGG | + | chr1_3:30327048-30327067 | None:intergenic | 45.0% | |
| ! | GGAGCCTTTTCTTGTCCAAT+AGG | - | chr1_3:30327053-30327072 | Msa0113970:intron | 45.0% |
| !! | AGATGTTTGAGTGTTGGGAC+AGG | + | chr1_3:30327083-30327102 | None:intergenic | 45.0% |
| ! | ATCTTCACTGTTTCTTGGCG+TGG | - | chr1_3:30327129-30327148 | Msa0113970:intron | 45.0% |
| !! | GCCCCATTTTTCCTTTGAAG+CGG | - | chr1_3:30327170-30327189 | Msa0113970:intron | 45.0% |
| GAACCATTGGAGTTCACAAG+CGG | + | chr1_3:30327217-30327236 | None:intergenic | 45.0% | |
| AACAAGTTCCTGGCGAATGT+AGG | + | chr1_3:30327241-30327260 | None:intergenic | 45.0% | |
| AGGCAATGTGACAAGCTGAA+TGG | + | chr1_3:30327302-30327321 | None:intergenic | 45.0% | |
| TTTCAGTATGTGTGGCCACT+AGG | + | chr1_3:30327380-30327399 | None:intergenic | 45.0% | |
| TGAATATACAAACCGGGGAG+GGG | - | chr1_3:30327400-30327419 | Msa0113970:intron | 45.0% | |
| ACACTCTCCAACTTAAGGAG+GGG | - | chr1_3:30327605-30327624 | Msa0113970:intron | 45.0% | |
| GAGTGGGGAACAATTGAAAG+TGG | - | chr1_3:30328144-30328163 | Msa0113970:intron | 45.0% | |
| TATGCGTTATCAGAGTAGGC+AGG | - | chr1_3:30328469-30328488 | Msa0113970:intron | 45.0% | |
| AGACGGTACTTCCAAGTGTA+TGG | - | chr1_3:30329257-30329276 | Msa0113970:five_prime_UTR | 45.0% | |
| GGTCAAGTAATATGGGACGG+AGG | - | chr1_3:30325754-30325773 | Msa0113970:three_prime_UTR | 50.0% | |
| AAGCAGAGAGAAGGAAGCAG+AGG | - | chr1_3:30325829-30325848 | Msa0113970:three_prime_UTR | 50.0% | |
| !! | TCGAAGAGCTTCTGAAGCTG+AGG | - | chr1_3:30325920-30325939 | Msa0113970:CDS | 50.0% |
| GAAGGGCAAAGCGGTTGAAT+CGG | + | chr1_3:30325990-30326009 | None:intergenic | 50.0% | |
| CGGACACTGATATGCCAACA+TGG | - | chr1_3:30326309-30326328 | Msa0113970:intron | 50.0% | |
| TCCTCAGATTAGGTGCGTCA+CGG | + | chr1_3:30326417-30326436 | None:intergenic | 50.0% | |
| AGTGTCCGTGCGTCATATAG+TGG | - | chr1_3:30326436-30326455 | Msa0113970:intron | 50.0% | |
| GTGTCCGTGCGTCATATAGT+GGG | - | chr1_3:30326437-30326456 | Msa0113970:intron | 50.0% | |
| TGTCCGTGCGTCATATAGTG+GGG | - | chr1_3:30326438-30326457 | Msa0113970:intron | 50.0% | |
| CAAGAAAAGGCTCCGAGAAG+GGG | + | chr1_3:30327047-30327066 | None:intergenic | 50.0% | |
| GACAAGAAAAGGCTCCGAGA+AGG | + | chr1_3:30327049-30327068 | None:intergenic | 50.0% | |
| GTTGGGACAGGAAGACCTAT+TGG | + | chr1_3:30327071-30327090 | None:intergenic | 50.0% | |
| TTGGAGTTCACAAGCGGTAG+AGG | + | chr1_3:30327211-30327230 | None:intergenic | 50.0% | |
| CTACCGCTTGTGAACTCCAA+TGG | - | chr1_3:30327211-30327230 | Msa0113970:intron | 50.0% | |
| GGCGAATGTAGGTGAACCAT+TGG | + | chr1_3:30327230-30327249 | None:intergenic | 50.0% | |
| ATGGTTCACCTACATTCGCC+AGG | - | chr1_3:30327230-30327249 | Msa0113970:intron | 50.0% | |
| GAATATACAAACCGGGGAGG+GGG | - | chr1_3:30327401-30327420 | Msa0113970:intron | 50.0% | |
| TGTTAAAGGAGGAAGCTGGG+AGG | + | chr1_3:30327506-30327525 | None:intergenic | 50.0% | |
| ACACACACCCCTCCTTAAGT+TGG | + | chr1_3:30327615-30327634 | None:intergenic | 50.0% | |
| TTATGAGCTGTTGCGACTGC+TGG | - | chr1_3:30327690-30327709 | Msa0113970:intron | 50.0% | |
| ! | CGACTGCTGGAGTTGGTTAA+CGG | - | chr1_3:30327703-30327722 | Msa0113970:intron | 50.0% |
| ! | GACTGCTGGAGTTGGTTAAC+GGG | - | chr1_3:30327704-30327723 | Msa0113970:intron | 50.0% |
| TTGACCACAGGTCAAAGCAC+AGG | - | chr1_3:30329075-30329094 | Msa0113970:intron | 50.0% | |
| TGTTCCTGTGCTTTGACCTG+TGG | + | chr1_3:30329082-30329101 | None:intergenic | 50.0% | |
| !! | CGAAATCTGTTTGGCCTTGC+TGG | - | chr1_3:30329195-30329214 | Msa0113970:five_prime_UTR | 50.0% |
| GATTAGGTGCGTCACGGTGT+CGG | + | chr1_3:30326411-30326430 | None:intergenic | 55.0% | |
| ACCGTGACGCACCTAATCTG+AGG | - | chr1_3:30326413-30326432 | Msa0113970:intron | 55.0% | |
| GCACGGACACTCCTCAGATT+AGG | + | chr1_3:30326427-30326446 | None:intergenic | 55.0% | |
| GCACCCCACTATATGACGCA+CGG | + | chr1_3:30326444-30326463 | None:intergenic | 55.0% | |
| GGGGGACTCGCTTAATGAGA+TGG | - | chr1_3:30326937-30326956 | Msa0113970:intron | 55.0% | |
| AGGGGGATATGTGGTGACTC+AGG | - | chr1_3:30327418-30327437 | Msa0113970:intron | 55.0% | |
| GGTCAAAGCACAGGAACAGC+TGG | - | chr1_3:30329084-30329103 | Msa0113970:intron | 55.0% | |
| ! | CATAGGCGTCGTGTCGGTGT+CGG | - | chr1_3:30326369-30326388 | Msa0113970:intron | 60.0% |
| AAACCGGGGAGGGGGATATG+TGG | - | chr1_3:30327409-30327428 | Msa0113970:intron | 60.0% | |
| TCACCACATATCCCCCTCCC+CGG | + | chr1_3:30327415-30327434 | None:intergenic | 60.0% | |
| GCTGTTGCGACTGCTGGAGT+TGG | - | chr1_3:30327696-30327715 | Msa0113970:intron | 60.0% | |
| TGTGTGTGTGCGCGCGCGTT+AGG | - | chr1_3:30327628-30327647 | Msa0113970:intron | 65.0% | |
| ! | ACGGTGTCGGACGCACGTCG+AGG | + | chr1_3:30326398-30326417 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 30325710 | 30329335 | 30325710 | ID=Msa0113970;Name=Msa0113970 |
| chr1_3 | mRNA | 30325710 | 30329335 | 30325710 | ID=Msa0113970-mRNA-1;Parent=Msa0113970;Name=Msa0113970-mRNA-1;_AED=0.12;_eAED=0.12;_QI=157|1|1|1|1|1|5|203|116 |
| chr1_3 | exon | 30325710 | 30325960 | 30325710 | ID=Msa0113970-mRNA-1:exon:10045;Parent=Msa0113970-mRNA-1 |
| chr1_3 | exon | 30326646 | 30326738 | 30326646 | ID=Msa0113970-mRNA-1:exon:10044;Parent=Msa0113970-mRNA-1 |
| chr1_3 | exon | 30326817 | 30326908 | 30326817 | ID=Msa0113970-mRNA-1:exon:10043;Parent=Msa0113970-mRNA-1 |
| chr1_3 | exon | 30327011 | 30327053 | 30327011 | ID=Msa0113970-mRNA-1:exon:10042;Parent=Msa0113970-mRNA-1 |
| chr1_3 | exon | 30329104 | 30329335 | 30329104 | ID=Msa0113970-mRNA-1:exon:10041;Parent=Msa0113970-mRNA-1 |
| chr1_3 | five_prime_UTR | 30329179 | 30329335 | 30329179 | ID=Msa0113970-mRNA-1:five_prime_utr;Parent=Msa0113970-mRNA-1 |
| chr1_3 | CDS | 30329104 | 30329178 | 30329104 | ID=Msa0113970-mRNA-1:cds;Parent=Msa0113970-mRNA-1 |
| chr1_3 | CDS | 30327011 | 30327053 | 30327011 | ID=Msa0113970-mRNA-1:cds;Parent=Msa0113970-mRNA-1 |
| chr1_3 | CDS | 30326817 | 30326908 | 30326817 | ID=Msa0113970-mRNA-1:cds;Parent=Msa0113970-mRNA-1 |
| chr1_3 | CDS | 30326646 | 30326738 | 30326646 | ID=Msa0113970-mRNA-1:cds;Parent=Msa0113970-mRNA-1 |
| chr1_3 | CDS | 30325913 | 30325960 | 30325913 | ID=Msa0113970-mRNA-1:cds;Parent=Msa0113970-mRNA-1 |
| chr1_3 | three_prime_UTR | 30325710 | 30325912 | 30325710 | ID=Msa0113970-mRNA-1:three_prime_utr;Parent=Msa0113970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
