Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466350 | XP_024635252.1 | 95.779 | 616 | 26 | 0 | 1 | 616 | 1 | 616 | 0.0 | 1233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466350 | sp|P36627|BYR3_SCHPO | 35.028 | 177 | 87 | 7 | 147 | 314 | 19 | 176 | 7.88e-20 | 90.9 |
| Msa0466350 | sp|P36627|BYR3_SCHPO | 30.729 | 192 | 94 | 4 | 169 | 355 | 19 | 176 | 1.96e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466350 | A0A396IXW8 | 89.123 | 616 | 26 | 1 | 1 | 616 | 1 | 575 | 0.0 | 1128 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016510 | Msa0466350 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa0071250 | Msa0466350 | 0.801188 | 1.012812e-48 | -8.615850e-47 |
| Msa0093010 | Msa0466350 | 0.825303 | 5.044655e-54 | -8.615850e-47 |
| Msa0093420 | Msa0466350 | 0.806610 | 7.565011e-50 | -8.615850e-47 |
| Msa0119900 | Msa0466350 | 0.816082 | 6.644109e-52 | -8.615850e-47 |
| Msa0121870 | Msa0466350 | 0.814574 | 1.437550e-51 | -8.615850e-47 |
| Msa0122530 | Msa0466350 | 0.803799 | 2.933431e-49 | -8.615850e-47 |
| Msa0190590 | Msa0466350 | 0.805385 | 1.369511e-49 | -8.615850e-47 |
| Msa0191070 | Msa0466350 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa0202490 | Msa0466350 | 0.830226 | 3.307920e-55 | -8.615850e-47 |
| Msa0206690 | Msa0466350 | 0.806104 | 9.672034e-50 | -8.615850e-47 |
| Msa0214550 | Msa0466350 | 0.811565 | 6.568807e-51 | -8.615850e-47 |
| Msa0215990 | Msa0466350 | 0.805560 | 1.258508e-49 | -8.615850e-47 |
| Msa0217670 | Msa0466350 | 0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa0367760 | Msa0466350 | 0.806539 | 7.833578e-50 | -8.615850e-47 |
| Msa0377820 | Msa0466350 | 0.817046 | 4.039425e-52 | -8.615850e-47 |
| Msa0385500 | Msa0466350 | 0.853567 | 2.194612e-61 | -8.615850e-47 |
| Msa0403770 | Msa0466350 | 0.802919 | 4.464152e-49 | -8.615850e-47 |
| Msa0456430 | Msa0466350 | 0.832627 | 8.486130e-56 | -8.615850e-47 |
| Msa0462600 | Msa0466350 | 0.859020 | 5.519503e-63 | -8.615850e-47 |
| Msa0466350 | Msa0470530 | 0.800620 | 1.322964e-48 | -8.615850e-47 |
| Msa0466350 | Msa0472930 | 0.810943 | 8.964433e-51 | -8.615850e-47 |
| Msa0466350 | Msa0485710 | 0.831142 | 1.973736e-55 | -8.615850e-47 |
| Msa0466350 | Msa0527740 | 0.801837 | 7.457361e-49 | -8.615850e-47 |
| Msa0466350 | Msa0542560 | 0.843698 | 1.194284e-58 | -8.615850e-47 |
| Msa0466350 | Msa0544540 | 0.803500 | 3.385103e-49 | -8.615850e-47 |
| Msa0466350 | Msa0588260 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0466350 | Msa0604290 | 0.816263 | 6.052100e-52 | -8.615850e-47 |
| Msa0466350 | Msa0605510 | 0.815566 | 8.655880e-52 | -8.615850e-47 |
| Msa0466350 | Msa0610550 | 0.851122 | 1.089929e-60 | -8.615850e-47 |
| Msa0466350 | Msa0646470 | 0.809593 | 1.752768e-50 | -8.615850e-47 |
| Msa0466350 | Msa0665280 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0466350 | Msa0689320 | 0.825220 | 5.278258e-54 | -8.615850e-47 |
| Msa0466350 | Msa0690310 | 0.801738 | 7.816467e-49 | -8.615850e-47 |
| Msa0466350 | Msa0690770 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
| Msa0466350 | Msa0693210 | 0.843287 | 1.537410e-58 | -8.615850e-47 |
| Msa0466350 | Msa0752700 | 0.800491 | 1.406022e-48 | -8.615850e-47 |
| Msa0466350 | Msa0794970 | 0.802086 | 6.627374e-49 | -8.615850e-47 |
| Msa0466350 | Msa0828590 | 0.846719 | 1.820182e-59 | -8.615850e-47 |
| Msa0466350 | Msa0831100 | 0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa0466350 | Msa0838370 | 0.812108 | 5.004553e-51 | -8.615850e-47 |
| Msa0466350 | Msa0858440 | 0.800998 | 1.107683e-48 | -8.615850e-47 |
| Msa0466350 | Msa0933380 | 0.809861 | 1.535078e-50 | -8.615850e-47 |
| Msa0466350 | Msa0958000 | 0.837033 | 6.600185e-57 | -8.615850e-47 |
| Msa0466350 | Msa1037520 | 0.814221 | 1.720236e-51 | -8.615850e-47 |
| Msa0466350 | Msa1039900 | 0.807755 | 4.328481e-50 | -8.615850e-47 |
| Msa0466350 | Msa1059470 | 0.801282 | 9.692964e-49 | -8.615850e-47 |
| Msa0466350 | Msa1128280 | 0.802423 | 5.650984e-49 | -8.615850e-47 |
| Msa0466350 | Msa1158640 | -0.850089 | 2.126712e-60 | -8.615850e-47 |
| Msa0466350 | Msa1165270 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
| Msa0466350 | Msa1178580 | 0.829519 | 4.920444e-55 | -8.615850e-47 |
| Msa0466350 | Msa1233850 | 0.842369 | 2.697258e-58 | -8.615850e-47 |
| Msa0466350 | Msa1276150 | 0.828135 | 1.064013e-54 | -8.615850e-47 |
| Msa0466350 | Msa1341060 | 0.807877 | 4.077226e-50 | -8.615850e-47 |
| Msa0466350 | Msa1352890 | 0.807366 | 5.235319e-50 | -8.615850e-47 |
| Msa0466350 | Msa1370590 | 0.802285 | 6.031113e-49 | -8.615850e-47 |
| Msa0466350 | Msa1384100 | 0.801835 | 7.466248e-49 | -8.615850e-47 |
| Msa0466350 | Msa1392980 | 0.826865 | 2.145517e-54 | -8.615850e-47 |
| Msa0244980 | Msa0466350 | 0.814272 | 1.676719e-51 | -8.615850e-47 |
| Msa0245580 | Msa0466350 | 0.816015 | 6.876114e-52 | -8.615850e-47 |
| Msa0256140 | Msa0466350 | 0.805712 | 1.169148e-49 | -8.615850e-47 |
| Msa0257490 | Msa0466350 | 0.838664 | 2.514850e-57 | -8.615850e-47 |
| Msa0259680 | Msa0466350 | 0.820435 | 6.868295e-53 | -8.615850e-47 |
| Msa0266360 | Msa0466350 | 0.805015 | 1.637149e-49 | -8.615850e-47 |
| Msa0269470 | Msa0466350 | 0.818137 | 2.293222e-52 | -8.615850e-47 |
| Msa0272300 | Msa0466350 | 0.818214 | 2.203255e-52 | -8.615850e-47 |
| Msa0281530 | Msa0466350 | 0.813051 | 3.112286e-51 | -8.615850e-47 |
| Msa0284180 | Msa0466350 | 0.825205 | 5.321865e-54 | -8.615850e-47 |
| Msa0296790 | Msa0466350 | 0.821883 | 3.186700e-53 | -8.615850e-47 |
| Msa0320590 | Msa0466350 | 0.813268 | 2.789606e-51 | -8.615850e-47 |
| Msa0321690 | Msa0466350 | 0.807011 | 6.225416e-50 | -8.615850e-47 |
| Msa0341480 | Msa0466350 | 0.823640 | 1.242631e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466350 | MtrunA17_Chr3g0119021 | 89.123 | 616 | 26 | 1 | 1 | 616 | 1 | 575 | 0.0 | 1128 |
| Msa0466350 | MtrunA17_Chr5g0439981 | 61.564 | 307 | 111 | 3 | 115 | 419 | 250 | 551 | 9.21e-131 | 397 |
| Msa0466350 | MtrunA17_Chr5g0439981 | 40.367 | 109 | 54 | 4 | 492 | 596 | 532 | 633 | 9.52e-11 | 64.7 |
| Msa0466350 | MtrunA17_Chr3g0080991 | 34.322 | 236 | 108 | 7 | 146 | 352 | 1458 | 1675 | 2.20e-26 | 115 |
| Msa0466350 | MtrunA17_Chr3g0080991 | 29.200 | 250 | 109 | 6 | 146 | 351 | 1985 | 2210 | 3.46e-19 | 92.8 |
| Msa0466350 | MtrunA17_Chr3g0080991 | 28.497 | 193 | 109 | 6 | 187 | 352 | 1985 | 2175 | 7.34e-13 | 72.4 |
| Msa0466350 | MtrunA17_Chr3g0145151 | 28.571 | 252 | 114 | 11 | 136 | 351 | 34 | 255 | 8.50e-12 | 66.2 |
| Msa0466350 | MtrunA17_Chr1g0203191 | 31.148 | 122 | 71 | 3 | 169 | 281 | 69 | 186 | 2.75e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0466350 | AT3G43590.1 | 43.405 | 417 | 186 | 10 | 45 | 424 | 44 | 447 | 1.50e-99 | 314 |
| Msa0466350 | AT5G36240.1 | 46.535 | 101 | 50 | 1 | 216 | 316 | 27 | 123 | 5.51e-24 | 102 |
| Msa0466350 | AT3G43490.1 | 37.267 | 161 | 87 | 5 | 38 | 184 | 23 | 183 | 4.06e-21 | 94.0 |
| Msa0466350 | AT4G36020.1 | 26.032 | 315 | 159 | 10 | 67 | 352 | 27 | 296 | 6.17e-18 | 85.5 |
| Msa0466350 | AT4G36020.3 | 26.032 | 315 | 159 | 10 | 67 | 352 | 27 | 296 | 6.17e-18 | 85.5 |
| Msa0466350 | AT2G17870.1 | 26.644 | 289 | 153 | 9 | 67 | 312 | 27 | 299 | 2.73e-15 | 77.4 |
| Msa0466350 | AT1G75560.2 | 33.333 | 198 | 101 | 6 | 134 | 313 | 63 | 247 | 4.38e-14 | 73.2 |
| Msa0466350 | AT1G75560.1 | 33.333 | 198 | 101 | 6 | 134 | 313 | 63 | 247 | 4.38e-14 | 73.2 |
| Msa0466350 | AT4G36020.2 | 26.740 | 273 | 137 | 9 | 67 | 312 | 27 | 263 | 2.79e-13 | 70.9 |
| Msa0466350 | AT4G36020.2 | 29.000 | 200 | 87 | 6 | 169 | 352 | 102 | 262 | 3.90e-13 | 70.5 |
Find 197 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCTGCTCTTCGATTTCT+TGG | 0.162405 | 3_3:+66906225 | None:intergenic |
| CCTCTACTCTTAGATTTCTT+TGG | 0.166255 | 3_3:+66906295 | None:intergenic |
| CTCTACTCTTAGATTTCTTT+GGG | 0.202709 | 3_3:+66906296 | None:intergenic |
| CCTCTCCTCTTTGATTTCTT+AGG | 0.205680 | 3_3:+66906433 | None:intergenic |
| TGTTATATCTGTAAGCTATT+TGG | 0.213807 | 3_3:-66908447 | Msa0466350:CDS |
| GTTGGAGTTCTAAAATTTCT+AGG | 0.253916 | 3_3:-66906003 | Msa0466350:CDS |
| TGCTTGAAGTGTGGAAATTC+TGG | 0.255080 | 3_3:-66908666 | Msa0466350:CDS |
| CCTCTGCTCTTCGATTTCTT+GGG | 0.268801 | 3_3:+66906226 | None:intergenic |
| TTCAGTTCGGTCCACCCTTC+AGG | 0.320128 | 3_3:-66905671 | Msa0466350:three_prime_UTR |
| ACCTCTGCTCTTGAATTTCA+TGG | 0.321755 | 3_3:+66906156 | None:intergenic |
| CCACACCTACTTTGTGCTAT+AGG | 0.325071 | 3_3:-66906900 | Msa0466350:CDS |
| CATAGTAGAAGTATTGTAAA+TGG | 0.325521 | 3_3:+66905511 | None:intergenic |
| TTGGTCTGCACCTCTCGATA+TGG | 0.332692 | 3_3:-66906509 | Msa0466350:CDS |
| ACCCTGCTACATATCTTAAA+AGG | 0.337895 | 3_3:+66905558 | None:intergenic |
| GAGAATGCACAAGTTCTATC+AGG | 0.341187 | 3_3:-66906852 | Msa0466350:CDS |
| CTGAGGTGTGCTGTAAGATT+AGG | 0.341520 | 3_3:-66910056 | Msa0466350:five_prime_UTR |
| CTTGAGACTCAGATCTTGAT+TGG | 0.346562 | 3_3:+66909877 | None:intergenic |
| CGTGCAGTCATGTGCTTCTC+TGG | 0.357612 | 3_3:+66908711 | None:intergenic |
| TGCTGCAAAACAATGTTCTA+AGG | 0.360499 | 3_3:-66908857 | Msa0466350:intron |
| CCTTGGGAATATGAGGCTTC+AGG | 0.367415 | 3_3:+66905962 | None:intergenic |
| AGGTAAAACGGCGTCGTTAG+AGG | 0.370608 | 3_3:+66909814 | None:intergenic |
| GTAAAGCTTCTTTCTTCTGT+AGG | 0.375344 | 3_3:+66906322 | None:intergenic |
| TGAGGTGTGCTGTAAGATTA+GGG | 0.375516 | 3_3:-66910055 | Msa0466350:five_prime_UTR |
| ACTCTAGTGGTGAAGGATAT+AGG | 0.378837 | 3_3:-66905841 | Msa0466350:CDS |
| TCTCTTCTTCCAAGTCCAAT+AGG | 0.385087 | 3_3:-66906105 | Msa0466350:CDS |
| TCCTCCCTCCCATGCCGCCT+AGG | 0.389727 | 3_3:+66910008 | None:intergenic |
| AAGAGTAGAGGTGGCTGGAC+GGG | 0.393769 | 3_3:-66906283 | Msa0466350:CDS |
| CCAACACATACACTTCGATT+TGG | 0.401125 | 3_3:+66909740 | None:intergenic |
| AAGGATATAGGAGAGGTAAT+TGG | 0.404417 | 3_3:-66905829 | Msa0466350:CDS |
| CATGCTCCCCAACTACTATC+TGG | 0.404551 | 3_3:+66908970 | None:intergenic |
| GAAGCATGAATCTGTGGAAC+TGG | 0.408067 | 3_3:-66909172 | Msa0466350:CDS |
| TTGACCCTCCAGATAGTAGT+TGG | 0.416306 | 3_3:-66908978 | Msa0466350:CDS |
| TGATAGAATATGTGCATTCT+CGG | 0.420405 | 3_3:+66906731 | None:intergenic |
| AGGACTCCAACTGGTCCTAT+TGG | 0.422284 | 3_3:+66906090 | None:intergenic |
| TGATTCGTGGTCTCTTGCCT+TGG | 0.422760 | 3_3:+66909970 | None:intergenic |
| CCACACCTACTTTGTGCTAT+AGG | 0.427699 | 3_3:-66906777 | Msa0466350:CDS |
| AATATTTATGCGAGTGGTAG+TGG | 0.429800 | 3_3:-66906040 | Msa0466350:CDS |
| CTCTGCTCTTCGATTTCTTG+GGG | 0.432190 | 3_3:+66906227 | None:intergenic |
| TCTGGAGGGTCAAAATATCT+TGG | 0.434365 | 3_3:+66908988 | None:intergenic |
| AGTAGTTCGGCATCAAGGTT+TGG | 0.435020 | 3_3:-66905866 | Msa0466350:CDS |
| GTTACGAACATAAGTTCAAC+AGG | 0.437267 | 3_3:+66905600 | None:intergenic |
| ATCATAGATATTCGTCATCA+AGG | 0.437302 | 3_3:-66905922 | Msa0466350:CDS |
| AGATATTCGTCATCAAGGTT+TGG | 0.438735 | 3_3:-66905917 | Msa0466350:CDS |
| TTGGAGTTCTAAAATTTCTA+GGG | 0.445546 | 3_3:-66906002 | Msa0466350:CDS |
| TAAAGCTTCTTTCTTCTGTA+GGG | 0.446719 | 3_3:+66906323 | None:intergenic |
| GGAAAGCATCGGCTGACCCT+TGG | 0.447016 | 3_3:+66905945 | None:intergenic |
| TGACCCTCCAGATAGTAGTT+GGG | 0.451078 | 3_3:-66908977 | Msa0466350:CDS |
| TGTGGTCAGATGGGTCATAC+TGG | 0.453010 | 3_3:-66908366 | Msa0466350:CDS |
| AGAGTAGAGGTGGCTGGACG+GGG | 0.454054 | 3_3:-66906282 | Msa0466350:CDS |
| GTTTCGATTCTCGTGTTCGA+AGG | 0.457467 | 3_3:+66909840 | None:intergenic |
| GAAAGCATCGGCTGACCCTT+GGG | 0.458498 | 3_3:+66905946 | None:intergenic |
| AACTCCCTAGGCGGCATGGG+AGG | 0.461569 | 3_3:-66910013 | Msa0466350:exon |
| GTATAGCTTCTTTCTTCTGT+AGG | 0.461609 | 3_3:+66906391 | None:intergenic |
| TCTCCTATATCCATCATCAT+TGG | 0.461769 | 3_3:+66905889 | None:intergenic |
| ACTCCAATGATGATGGATAT+AGG | 0.461906 | 3_3:-66905892 | Msa0466350:CDS |
| TTGGAAGAAGAGAATTCTCC+AGG | 0.464073 | 3_3:+66906115 | None:intergenic |
| GGCTGACCCTTGGGAATATG+AGG | 0.468220 | 3_3:+66905955 | None:intergenic |
| AGGCGGCATGGGAGGGAGGA+AGG | 0.469116 | 3_3:-66910005 | Msa0466350:exon |
| CCTCCCTCCCATGCCGCCTA+GGG | 0.470434 | 3_3:+66910009 | None:intergenic |
| TTGTTACAAATGTGGTCAGA+TGG | 0.471165 | 3_3:-66908376 | Msa0466350:CDS |
| AGTTGCTACGTCTGCAAGAA+AGG | 0.472885 | 3_3:-66908756 | Msa0466350:CDS |
| TTAAAGTCTCTATCTTCTGC+AGG | 0.473283 | 3_3:+66906184 | None:intergenic |
| ACTCCCTAGGCGGCATGGGA+GGG | 0.478407 | 3_3:-66910012 | Msa0466350:exon |
| TCCACCCTTCAGGAAGTAAT+GGG | 0.479144 | 3_3:-66905661 | Msa0466350:three_prime_UTR |
| AATTGATGCAGGCATGTTCA+AGG | 0.479193 | 3_3:-66906948 | Msa0466350:intron |
| GTGCTATAGGTGTGGTGAAG+GGG | 0.485852 | 3_3:-66906764 | Msa0466350:CDS |
| TTTCGATTCTCGTGTTCGAA+GGG | 0.487535 | 3_3:+66909841 | None:intergenic |
| TGTCCCCGCAGGACTCCAAC+TGG | 0.488598 | 3_3:+66906081 | None:intergenic |
| TTGCCACAAGTCTTTCAGTT+CGG | 0.488684 | 3_3:-66905684 | Msa0466350:three_prime_UTR |
| TGGTCTGCACCTCTCGATAT+GGG | 0.489901 | 3_3:-66906508 | Msa0466350:CDS |
| TGCTATAATTGTGGCGAGGA+AGG | 0.493123 | 3_3:-66908949 | Msa0466350:CDS |
| TGCTATGTATGTGGTGAGTT+GGG | 0.493262 | 3_3:-66908883 | Msa0466350:CDS |
| TCTTGCAGACGTAGCAACTC+TGG | 0.493736 | 3_3:+66908760 | None:intergenic |
| AATCGAAGAGCAGAGGTGGC+TGG | 0.497514 | 3_3:-66906219 | Msa0466350:CDS |
| TTGTGCTATAGGTGTGGTGA+AGG | 0.499258 | 3_3:-66906766 | Msa0466350:CDS |
| TTGTAACAAGAAATTTCTCC+CGG | 0.503043 | 3_3:+66908390 | None:intergenic |
| GTCCACCCTTCAGGAAGTAA+TGG | 0.506939 | 3_3:-66905662 | Msa0466350:three_prime_UTR |
| AGGACCAGTTGGAGTCCTGC+GGG | 0.507329 | 3_3:-66906085 | Msa0466350:CDS |
| CCTCTGCTCTTGAATTTCAT+GGG | 0.511578 | 3_3:+66906157 | None:intergenic |
| AAAACAACCTTGAGATCATC+CGG | 0.511648 | 3_3:+66908609 | None:intergenic |
| TGGAACTCCCTAGGCGGCAT+GGG | 0.511677 | 3_3:-66910016 | Msa0466350:exon |
| TTGATGACGAATATCTATGA+TGG | 0.512902 | 3_3:+66905924 | None:intergenic |
| CCCTAGGCGGCATGGGAGGG+AGG | 0.513398 | 3_3:-66910009 | Msa0466350:exon |
| TGGATATAGGAGAAGTAGTT+CGG | 0.513451 | 3_3:-66905879 | Msa0466350:CDS |
| AATTCAAGAGCAGAGGTGGC+TGG | 0.513526 | 3_3:-66906150 | Msa0466350:CDS |
| CCAACTGGTCCTATTGGACT+TGG | 0.517424 | 3_3:+66906096 | None:intergenic |
| GGCTGGATGGCTGATCACCC+TGG | 0.522893 | 3_3:-66906133 | Msa0466350:CDS |
| ATATTAGTGTTTCTAGCAGA+TGG | 0.528319 | 3_3:+66906058 | None:intergenic |
| AATCAAAGAGGAGAGGTGGC+TGG | 0.529181 | 3_3:-66906426 | Msa0466350:CDS |
| GATAGAATATGTGCATTCTC+GGG | 0.530153 | 3_3:+66906732 | None:intergenic |
| ATGCAGGAATGATTATTCAC+CGG | 0.532954 | 3_3:-66908628 | Msa0466350:CDS |
| GACCCTCCAGATAGTAGTTG+GGG | 0.533076 | 3_3:-66908976 | Msa0466350:CDS |
| CAGCATTGACACAACATAAG+TGG | 0.533186 | 3_3:+66908424 | None:intergenic |
| TTGGAACTCCCTAGGCGGCA+TGG | 0.534196 | 3_3:-66910017 | Msa0466350:exon |
| GAAATTTCTTGTTACAAATG+TGG | 0.535838 | 3_3:-66908384 | Msa0466350:CDS |
| TTTGGCAACTCCAATGATGA+TGG | 0.536537 | 3_3:-66905899 | Msa0466350:CDS |
| ATGCTATGTATGTGGTGAGT+TGG | 0.536721 | 3_3:-66908884 | Msa0466350:CDS |
| GATATAGGAGAGGTAATTGG+TGG | 0.536780 | 3_3:-66905826 | Msa0466350:CDS |
| ATGAAATTCAAGAGCAGAGG+TGG | 0.536820 | 3_3:-66906154 | Msa0466350:CDS |
| GCTTGAAGTGTGGAAATTCT+GGG | 0.538694 | 3_3:-66908665 | Msa0466350:CDS |
| AAGCCTCTTTCGTCTGTATG+AGG | 0.542030 | 3_3:+66906463 | None:intergenic |
| AGATTTCTGAGGAGGTAAAA+CGG | 0.542148 | 3_3:+66909802 | None:intergenic |
| CGAGATTGTCGATTGATTCG+TGG | 0.542996 | 3_3:+66909957 | None:intergenic |
| GGTAGTGGAAGTCGAACTCC+AGG | 0.543268 | 3_3:-66906025 | Msa0466350:CDS |
| AAGGTTGCAAGGTGAGACTA+CGG | 0.543377 | 3_3:-66906929 | Msa0466350:CDS |
| AATCTAAGAGTAGAGGTGGC+TGG | 0.543601 | 3_3:-66906288 | Msa0466350:CDS |
| CTAGCAGATGGTGTCCCCGC+AGG | 0.545192 | 3_3:+66906070 | None:intergenic |
| TCAGATGGGTCATACTGGTT+CGG | 0.545818 | 3_3:-66908361 | Msa0466350:intron |
| AGAATGCACATATTCTATCA+AGG | 0.551056 | 3_3:-66906728 | Msa0466350:intron |
| AAGTTTCAAAGTGAGACTAC+TGG | 0.551532 | 3_3:-66906805 | Msa0466350:CDS |
| TAAGAGTAGAGGTGGCTGGA+CGG | 0.552846 | 3_3:-66906284 | Msa0466350:CDS |
| TGCTATAGGTGTGGTGAAGG+AGG | 0.553090 | 3_3:-66906886 | Msa0466350:CDS |
| GTACGCCCATTACTTCCTGA+AGG | 0.553311 | 3_3:+66905656 | None:intergenic |
| TGTTACAAATGTGGTCAGAT+GGG | 0.553753 | 3_3:-66908375 | Msa0466350:CDS |
| CTTTAAAGAAAATGAATACA+CGG | 0.557755 | 3_3:-66906536 | Msa0466350:CDS |
| GAGGAGAGGTGGCTGGATGA+CGG | 0.558594 | 3_3:-66906419 | Msa0466350:CDS |
| TCTACTCTTAGATTTCTTTG+GGG | 0.561458 | 3_3:+66906297 | None:intergenic |
| TGCTATAGGTGTGGTGAAGG+GGG | 0.563583 | 3_3:-66906763 | Msa0466350:CDS |
| GGAGAAGTAGTTCGGCATCA+AGG | 0.564646 | 3_3:-66905871 | Msa0466350:CDS |
| TATCAGGGTACAATTGATGC+AGG | 0.564930 | 3_3:-66906836 | Msa0466350:CDS |
| TCAGAAATCTGAGCTTCTGA+TGG | 0.565548 | 3_3:-66909789 | Msa0466350:CDS |
| GAAGCGAGTGTGGATCAGAT+AGG | 0.566927 | 3_3:-66909150 | Msa0466350:CDS |
| CAAGAGCAGAGGTGGCTGGA+TGG | 0.567200 | 3_3:-66906146 | Msa0466350:CDS |
| CAATGCTGCTGATGCAACAC+CGG | 0.572275 | 3_3:-66908409 | Msa0466350:CDS |
| CCCATGAAATTCAAGAGCAG+AGG | 0.572284 | 3_3:-66906157 | Msa0466350:CDS |
| TTTGGCAACTCTAGTGGTGA+AGG | 0.574137 | 3_3:-66905848 | Msa0466350:CDS |
| AAAATGAATACACGGGACAT+TGG | 0.575346 | 3_3:-66906528 | Msa0466350:CDS |
| GAAGGAGAAGTCGAAAGCCA+AGG | 0.576316 | 3_3:-66909987 | Msa0466350:CDS |
| CGGCCTCATACAGACGAAAG+AGG | 0.581226 | 3_3:-66906466 | Msa0466350:CDS |
| CCAAGTCCAATAGGACCAGT+TGG | 0.582670 | 3_3:-66906096 | Msa0466350:CDS |
| TTTAATGGCTGCAGAGCAAG+AGG | 0.583974 | 3_3:-66909220 | Msa0466350:CDS |
| AACACTAATATTTATGCGAG+TGG | 0.584709 | 3_3:-66906046 | Msa0466350:CDS |
| TGTGGAACTGGAAGCGAGTG+TGG | 0.585170 | 3_3:-66909160 | Msa0466350:CDS |
| CAGAGAAGCACATGACTGCA+CGG | 0.586586 | 3_3:-66908710 | Msa0466350:CDS |
| AAGTAGAGGTGGCTGGACAA+TGG | 0.589351 | 3_3:-66906350 | Msa0466350:CDS |
| TTATTCACCGGATGATCTCA+AGG | 0.590352 | 3_3:-66908616 | Msa0466350:intron |
| TCAAGGTTTGGCAACTCTAG+TGG | 0.591012 | 3_3:-66905854 | Msa0466350:CDS |
| CCAAAGAAATCTAAGAGTAG+AGG | 0.593833 | 3_3:-66906295 | Msa0466350:CDS |
| TGTGCTATAGGTGTGGTGAA+GGG | 0.593983 | 3_3:-66906765 | Msa0466350:CDS |
| CAGGCATGTTCAAGGTTGCA+AGG | 0.596010 | 3_3:-66906940 | Msa0466350:CDS |
| GAGCAGAGGTGGCTGGACAA+CGG | 0.596343 | 3_3:-66906212 | Msa0466350:CDS |
| AAGAAATCTAAGAGTAGAGG+TGG | 0.596476 | 3_3:-66906292 | Msa0466350:CDS |
| AAGAAATCGAAGAGCAGAGG+TGG | 0.600256 | 3_3:-66906223 | Msa0466350:CDS |
| CTGCCGCTGAATACGAGTGA+AGG | 0.603577 | 3_3:+66909920 | None:intergenic |
| TAGGACCAGTTGGAGTCCTG+CGG | 0.605008 | 3_3:-66906086 | Msa0466350:CDS |
| TACGCCCATTACTTCCTGAA+GGG | 0.606309 | 3_3:+66905657 | None:intergenic |
| CCACACCTATAGCACAAAGT+AGG | 0.606681 | 3_3:+66906772 | None:intergenic |
| CCACACCTATAGCACAAAGT+AGG | 0.606681 | 3_3:+66906895 | None:intergenic |
| AGATCTGAGTCTCAAGATCG+TGG | 0.607666 | 3_3:-66909870 | Msa0466350:CDS |
| AACTCACCACATACATAGCA+TGG | 0.608122 | 3_3:+66908886 | None:intergenic |
| GAGTAGAGGTGGCTGGACGG+GGG | 0.608327 | 3_3:-66906281 | Msa0466350:CDS |
| CTCCCCAACTACTATCTGGA+GGG | 0.609658 | 3_3:+66908974 | None:intergenic |
| GCCCATTACTTCCTGAAGGG+TGG | 0.613166 | 3_3:+66905660 | None:intergenic |
| AGAGAAGCACATGACTGCAC+GGG | 0.614866 | 3_3:-66908709 | Msa0466350:CDS |
| TGGGGAGCATGCTATAATTG+TGG | 0.615270 | 3_3:-66908958 | Msa0466350:CDS |
| TACAGAGAAGCATGAATCTG+TGG | 0.616167 | 3_3:-66909178 | Msa0466350:CDS |
| TCTGCTCTTCGATTTCTTGG+GGG | 0.616452 | 3_3:+66906228 | None:intergenic |
| AAGAAATCAAAGAGGAGAGG+TGG | 0.616538 | 3_3:-66906430 | Msa0466350:CDS |
| GTGGAAGTCGAACTCCAGGT+TGG | 0.617850 | 3_3:-66906021 | Msa0466350:CDS |
| CCTATAGCACAAAGTAGGTG+TGG | 0.621452 | 3_3:+66906900 | None:intergenic |
| AGAATGCACAAGTTCTATCA+GGG | 0.622439 | 3_3:-66906851 | Msa0466350:CDS |
| GCTGAATACGAGTGAAGGAG+TGG | 0.622721 | 3_3:+66909925 | None:intergenic |
| AATGCTGCTGATGCAACACC+GGG | 0.624524 | 3_3:-66908408 | Msa0466350:CDS |
| CCTGAAGCCTCATATTCCCA+AGG | 0.625347 | 3_3:-66905962 | Msa0466350:CDS |
| AGAAGCTCAGATTTCTGAGG+AGG | 0.625578 | 3_3:+66909794 | None:intergenic |
| AATGGCTGCAGAGCAAGAGG+TGG | 0.629284 | 3_3:-66909217 | Msa0466350:CDS |
| GCTCCCCAACTACTATCTGG+AGG | 0.629473 | 3_3:+66908973 | None:intergenic |
| TTGTGCTATAGGTGTGGTGA+AGG | 0.629866 | 3_3:-66906889 | Msa0466350:CDS |
| TGGAGTTCTAAAATTTCTAG+GGG | 0.630318 | 3_3:-66906001 | Msa0466350:CDS |
| TTTAAAGAAAATGAATACAC+GGG | 0.632266 | 3_3:-66906535 | Msa0466350:CDS |
| CCCAAGAAATCGAAGAGCAG+AGG | 0.632661 | 3_3:-66906226 | Msa0466350:CDS |
| ATATCTATGATGGAAAGCAT+CGG | 0.635238 | 3_3:+66905934 | None:intergenic |
| ACTCCTTCACTCGTATTCAG+CGG | 0.641368 | 3_3:-66909923 | Msa0466350:CDS |
| AAGAAACCATGCTATGTATG+TGG | 0.646078 | 3_3:-66908892 | Msa0466350:CDS |
| GCTATAGGTGTGGTGAAGGA+GGG | 0.650856 | 3_3:-66906885 | Msa0466350:CDS |
| AGGTTGCAAGGTGAGACTAC+GGG | 0.652015 | 3_3:-66906928 | Msa0466350:CDS |
| ACGGGCTTCTAAAAGTCTGA+CGG | 0.658559 | 3_3:-66908691 | Msa0466350:CDS |
| CCTAAGAAATCAAAGAGGAG+AGG | 0.660128 | 3_3:-66906433 | Msa0466350:CDS |
| CCTATAGCACAAAGTAGGTG+TGG | 0.661415 | 3_3:+66906777 | None:intergenic |
| TGGAAGAAGAGAATTCTCCA+GGG | 0.661485 | 3_3:+66906116 | None:intergenic |
| CTGAAGCCTCATATTCCCAA+GGG | 0.662550 | 3_3:-66905961 | Msa0466350:CDS |
| GGACCGAACTGAAAGACTTG+TGG | 0.662660 | 3_3:+66905681 | None:intergenic |
| TGCTACGTCTGCAAGAAAGG+TGG | 0.663544 | 3_3:-66908753 | Msa0466350:CDS |
| ATCAGAAGCTCAGATTTCTG+AGG | 0.664294 | 3_3:+66909791 | None:intergenic |
| TAAACTGTACAGCAGCGAAG+CGG | 0.671137 | 3_3:-66908915 | Msa0466350:CDS |
| CAACACCTAAGAAATCAAAG+AGG | 0.673886 | 3_3:-66906438 | Msa0466350:CDS |
| GGATCAGATAGGTGACAACA+TGG | 0.674837 | 3_3:-66909139 | Msa0466350:CDS |
| TCAAAGTGAGACTACTGGTG+CGG | 0.678171 | 3_3:-66906800 | Msa0466350:CDS |
| CCTACTTTGTGCTATAGGTG+TGG | 0.685206 | 3_3:-66906772 | Msa0466350:CDS |
| CCTACTTTGTGCTATAGGTG+TGG | 0.685206 | 3_3:-66906895 | Msa0466350:CDS |
| AGTGGTGAAGGATATAGGAG+AGG | 0.686632 | 3_3:-66905836 | Msa0466350:CDS |
| TCAATTTGGAACTCCCTAGG+CGG | 0.689501 | 3_3:-66910022 | Msa0466350:five_prime_UTR |
| CTGACGGTATGCTTGAAGTG+TGG | 0.691033 | 3_3:-66908675 | Msa0466350:CDS |
| CGAGTGAAGGAGTGGAAGCG+CGG | 0.692324 | 3_3:+66909933 | None:intergenic |
| AGCATGCTATAATTGTGGCG+AGG | 0.714278 | 3_3:-66908953 | Msa0466350:CDS |
| GGACCAGTTGGAGTCCTGCG+GGG | 0.722458 | 3_3:-66906084 | Msa0466350:CDS |
| GGAGTTCTAAAATTTCTAGG+GGG | 0.732106 | 3_3:-66906000 | Msa0466350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTTTAGTTTTATTTT+TGG | + | chr3_3:66905508-66905527 | None:intergenic | 10.0% |
| !!! | TATTTTAAGATACAAAAATA+TGG | + | chr3_3:66908287-66908306 | None:intergenic | 10.0% |
| !! | AATAATAAATAACAAAGAAA+AGG | + | chr3_3:66908957-66908976 | None:intergenic | 10.0% |
| !! | AATCAGATTATGATTTAATT+TGG | - | chr3_3:66905992-66906011 | Msa0466350:CDS | 15.0% |
| !!! | TAATCTAAAGTTTAGTTATA+AGG | + | chr3_3:66906075-66906094 | None:intergenic | 15.0% |
| !!! | ATATATTACAAATTTGCTAA+AGG | - | chr3_3:66907039-66907058 | Msa0466350:intron | 15.0% |
| !!! | TTTCTTTCTTTTGTTTAATT+AGG | - | chr3_3:66907135-66907154 | Msa0466350:intron | 15.0% |
| !! | AAACTTAACATAATATATTC+AGG | + | chr3_3:66908362-66908381 | None:intergenic | 15.0% |
| !! | TATTAAAATAGTGAATTCAA+TGG | - | chr3_3:66908421-66908440 | Msa0466350:CDS | 15.0% |
| !! | ATTAAAATAGTGAATTCAAT+GGG | - | chr3_3:66908422-66908441 | Msa0466350:CDS | 15.0% |
| !! | TAATCTGATTGATATCAAAA+GGG | + | chr3_3:66905982-66906001 | None:intergenic | 20.0% |
| !! | ATAATCTGATTGATATCAAA+AGG | + | chr3_3:66905983-66906002 | None:intergenic | 20.0% |
| !! | ATAAAAATTGCATTGTAACA+TGG | - | chr3_3:66906040-66906059 | Msa0466350:CDS | 20.0% |
| !!! | TTGATAGTAATTTTATTTCC+TGG | - | chr3_3:66907740-66907759 | Msa0466350:intron | 20.0% |
| !! | ATGATAGGATAATTAAGAAT+TGG | - | chr3_3:66908045-66908064 | Msa0466350:intron | 20.0% |
| !! | ACATTACTACTAAATAACTT+TGG | + | chr3_3:66908145-66908164 | None:intergenic | 20.0% |
| !! | TTACTTCCAAATAAAACTAT+TGG | - | chr3_3:66908622-66908641 | Msa0466350:CDS | 20.0% |
| !!! | TATTTGCCAATAGTTTTATT+TGG | + | chr3_3:66908631-66908650 | None:intergenic | 20.0% |
| !!! | CTTTAAAGAAAATGAATACA+CGG | - | chr3_3:66909077-66909096 | Msa0466350:intron | 20.0% |
| !! | TTTAAAGAAAATGAATACAC+GGG | - | chr3_3:66909078-66909097 | Msa0466350:intron | 20.0% |
| !! | ATTTAAAAAAACTTGCAAGT+AGG | + | chr3_3:66909867-66909886 | None:intergenic | 20.0% |
| ! | AAAAAAAAACTGAAGATCTG+AGG | - | chr3_3:66905540-66905559 | Msa0466350:three_prime_UTR | 25.0% |
| !!! | AGGGTTTTCATTTTTCAATT+TGG | - | chr3_3:66905577-66905596 | Msa0466350:three_prime_UTR | 25.0% |
| !!! | ATTATGATTTAATTTGGAGC+TGG | - | chr3_3:66905998-66906017 | Msa0466350:CDS | 25.0% |
| !!! | TTGATTTGTAGAGACATTTT+AGG | - | chr3_3:66906153-66906172 | Msa0466350:CDS | 25.0% |
| !!! | TTTTAGGAACTAACCTAAAA+AGG | - | chr3_3:66906169-66906188 | Msa0466350:CDS | 25.0% |
| !! | AAAATTCCTCGAACTTTTAT+AGG | + | chr3_3:66906263-66906282 | None:intergenic | 25.0% |
| !!! | AATGTTTTTGCTTTCTATGT+AGG | - | chr3_3:66906369-66906388 | Msa0466350:CDS | 25.0% |
| ! | TGTTATATCTGTAAGCTATT+TGG | - | chr3_3:66907166-66907185 | Msa0466350:intron | 25.0% |
| ! | GAAATTTCTTGTTACAAATG+TGG | - | chr3_3:66907229-66907248 | Msa0466350:intron | 25.0% |
| ! | TTAATAATTATGCACCTTTC+CGG | - | chr3_3:66907288-66907307 | Msa0466350:intron | 25.0% |
| ! | ATGTGAGTATAAATTTCAGA+GGG | + | chr3_3:66907716-66907735 | None:intergenic | 25.0% |
| ! | AATGTGAGTATAAATTTCAG+AGG | + | chr3_3:66907717-66907736 | None:intergenic | 25.0% |
| !!! | GTAATTTTATTTCCTGGTAT+TGG | - | chr3_3:66907746-66907765 | Msa0466350:intron | 25.0% |
| ! | ACATATTATAGCTGAGAAAA+TGG | + | chr3_3:66908589-66908608 | None:intergenic | 25.0% |
| ! | TACAGTCTAAAAATTTAGTC+AGG | - | chr3_3:66908908-66908927 | Msa0466350:CDS | 25.0% |
| !! | CGTGTATTCATTTTCTTTAA+AGG | + | chr3_3:66909079-66909098 | None:intergenic | 25.0% |
| !!! | TTGGAGTTCTAAAATTTCTA+GGG | - | chr3_3:66909611-66909630 | Msa0466350:intron | 25.0% |
| !! | TCATTTTACAAGTTTACAGA+TGG | + | chr3_3:66909842-66909861 | None:intergenic | 25.0% |
| !!! | CATAGTAGAAGTATTGTAAA+TGG | + | chr3_3:66910105-66910124 | None:intergenic | 25.0% |
| TTAATCAAATCATGCCAAGT+AGG | - | chr3_3:66906128-66906147 | Msa0466350:CDS | 30.0% | |
| TCTACAAATCAATTCCTACT+TGG | + | chr3_3:66906145-66906164 | None:intergenic | 30.0% | |
| TCAAATCCTATAAAAGTTCG+AGG | - | chr3_3:66906254-66906273 | Msa0466350:CDS | 30.0% | |
| TTAATAAAACAACACCCACT+TGG | - | chr3_3:66906323-66906342 | Msa0466350:CDS | 30.0% | |
| !! | GCTTTCTATGTAGGTTTTAA+TGG | - | chr3_3:66906378-66906397 | Msa0466350:CDS | 30.0% |
| TTTCAAAATAGTGTACCACA+AGG | - | chr3_3:66906553-66906572 | Msa0466350:CDS | 30.0% | |
| TTAAACCTTCATAAGCCAAT+AGG | + | chr3_3:66906794-66906813 | None:intergenic | 30.0% | |
| ! | ATTGGCTTATGAAGGTTTAA+AGG | - | chr3_3:66906794-66906813 | Msa0466350:CDS | 30.0% |
| !! | ACAAATTTGCTAAAGGTTCT+TGG | - | chr3_3:66907046-66907065 | Msa0466350:intron | 30.0% |
| TTGTAACAAGAAATTTCTCC+CGG | + | chr3_3:66907226-66907245 | None:intergenic | 30.0% | |
| AAAAAAGAGATGCTTATCTC+CGG | + | chr3_3:66907318-66907337 | None:intergenic | 30.0% | |
| AATGATTGGAAGAGATTATC+AGG | + | chr3_3:66907494-66907513 | None:intergenic | 30.0% | |
| TGACATTTAAGGGTAATGAT+TGG | + | chr3_3:66907508-66907527 | None:intergenic | 30.0% | |
| GGGAATCAAGTAAGTTTAAA+AGG | + | chr3_3:66907696-66907715 | None:intergenic | 30.0% | |
| TGCTACAATGAAAGTTAGAT+TGG | - | chr3_3:66907822-66907841 | Msa0466350:intron | 30.0% | |
| CATCTATGGTATAGAAAATG+TGG | - | chr3_3:66907845-66907864 | Msa0466350:intron | 30.0% | |
| TATGGTATAGAAAATGTGGT+AGG | - | chr3_3:66907849-66907868 | Msa0466350:intron | 30.0% | |
| ATGGTATAGAAAATGTGGTA+GGG | - | chr3_3:66907850-66907869 | Msa0466350:intron | 30.0% | |
| ! | GAAGCATTAGTAAGAATAGT+AGG | - | chr3_3:66907915-66907934 | Msa0466350:intron | 30.0% |
| CTTTAAGCTTGATTCATGAT+AGG | - | chr3_3:66908030-66908049 | Msa0466350:intron | 30.0% | |
| GGATATTCCCTAAAAATGAA+TGG | - | chr3_3:66908066-66908085 | Msa0466350:intron | 30.0% | |
| TGATAGAATATGTGCATTCT+CGG | + | chr3_3:66908885-66908904 | None:intergenic | 30.0% | |
| AGAATGCACATATTCTATCA+AGG | - | chr3_3:66908885-66908904 | Msa0466350:CDS | 30.0% | |
| !!! | CCTCTACTTTTTGATTTCTT+AGG | + | chr3_3:66909252-66909271 | None:intergenic | 30.0% |
| CCTAAGAAATCAAAAAGTAG+AGG | - | chr3_3:66909249-66909268 | Msa0466350:intron | 30.0% | |
| AAGAAATCAAAAAGTAGAGG+TGG | - | chr3_3:66909252-66909271 | Msa0466350:intron | 30.0% | |
| TAAAGCTTCTTTCTTCTGTA+GGG | + | chr3_3:66909293-66909312 | None:intergenic | 30.0% | |
| TCTACTCTTAGATTTCTTTG+GGG | + | chr3_3:66909319-66909338 | None:intergenic | 30.0% | |
| CTCTACTCTTAGATTTCTTT+GGG | + | chr3_3:66909320-66909339 | None:intergenic | 30.0% | |
| !! | ATATTAGTGTTTCTAGCAGA+TGG | + | chr3_3:66909558-66909577 | None:intergenic | 30.0% |
| AACACTAATATTTATGCGAG+TGG | - | chr3_3:66909567-66909586 | Msa0466350:intron | 30.0% | |
| !! | GTTGGAGTTCTAAAATTTCT+AGG | - | chr3_3:66909610-66909629 | Msa0466350:intron | 30.0% |
| !! | TGGAGTTCTAAAATTTCTAG+GGG | - | chr3_3:66909612-66909631 | Msa0466350:intron | 30.0% |
| ! | ATATCTATGATGGAAAGCAT+CGG | + | chr3_3:66909682-66909701 | None:intergenic | 30.0% |
| !! | TTGATGACGAATATCTATGA+TGG | + | chr3_3:66909692-66909711 | None:intergenic | 30.0% |
| ATCATAGATATTCGTCATCA+AGG | - | chr3_3:66909691-66909710 | Msa0466350:intron | 30.0% | |
| !!! | TACCTTTTAAGATATGTAGC+AGG | - | chr3_3:66910053-66910072 | Msa0466350:five_prime_UTR | 30.0% |
| !!! | ACCTTTTAAGATATGTAGCA+GGG | - | chr3_3:66910054-66910073 | Msa0466350:five_prime_UTR | 30.0% |
| !! | TTTTCAATTTGGAACTCCCT+AGG | - | chr3_3:66905588-66905607 | Msa0466350:three_prime_UTR | 35.0% |
| ! | AGATTTCTGAGGAGGTAAAA+CGG | + | chr3_3:66905814-66905833 | None:intergenic | 35.0% |
| CAGCATCAGAGTGATTTAAT+TGG | - | chr3_3:66906192-66906211 | Msa0466350:CDS | 35.0% | |
| ! | CGATGTTTCTTTTCTATCAG+CGG | - | chr3_3:66906599-66906618 | Msa0466350:intron | 35.0% |
| ! | GATGTTTCTTTTCTATCAGC+GGG | - | chr3_3:66906600-66906619 | Msa0466350:intron | 35.0% |
| ! | ATGTTTCTTTTCTATCAGCG+GGG | - | chr3_3:66906601-66906620 | Msa0466350:intron | 35.0% |
| AAGAAACCATGCTATGTATG+TGG | - | chr3_3:66906721-66906740 | Msa0466350:intron | 35.0% | |
| TGCTGCAAAACAATGTTCTA+AGG | - | chr3_3:66906756-66906775 | Msa0466350:CDS | 35.0% | |
| ATGCAGGAATGATTATTCAC+CGG | - | chr3_3:66906985-66907004 | Msa0466350:intron | 35.0% | |
| AAAACAACCTTGAGATCATC+CGG | + | chr3_3:66907007-66907026 | None:intergenic | 35.0% | |
| TTGAGTTTGCATTGGAATAG+TGG | - | chr3_3:66907069-66907088 | Msa0466350:intron | 35.0% | |
| TTGTTACAAATGTGGTCAGA+TGG | - | chr3_3:66907237-66907256 | Msa0466350:intron | 35.0% | |
| TGTTACAAATGTGGTCAGAT+GGG | - | chr3_3:66907238-66907257 | Msa0466350:intron | 35.0% | |
| ACATTGTAAAGTCTCTAGTG+TGG | + | chr3_3:66907417-66907436 | None:intergenic | 35.0% | |
| !! | TTGACAGCACTGACATTTAA+GGG | + | chr3_3:66907518-66907537 | None:intergenic | 35.0% |
| !! | ATTGACAGCACTGACATTTA+AGG | + | chr3_3:66907519-66907538 | None:intergenic | 35.0% |
| ! | TTGCGGATTGCAAAAAATAG+CGG | - | chr3_3:66907538-66907557 | Msa0466350:intron | 35.0% |
| GTCACAGTATTGTCAAATAG+CGG | + | chr3_3:66907609-66907628 | None:intergenic | 35.0% | |
| TGACAATACTGTGACATGTA+TGG | - | chr3_3:66907614-66907633 | Msa0466350:intron | 35.0% | |
| TGGTCATGAATAGCAGAAAA+AGG | - | chr3_3:66907634-66907653 | Msa0466350:intron | 35.0% | |
| GGTCATGAATAGCAGAAAAA+GGG | - | chr3_3:66907635-66907654 | Msa0466350:intron | 35.0% | |
| GAAAGTTAGATTGGCATCTA+TGG | - | chr3_3:66907831-66907850 | Msa0466350:intron | 35.0% | |
| TACCTGAACCAACAAAGATA+AGG | + | chr3_3:66907876-66907895 | None:intergenic | 35.0% | |
| AGTAAGAATAGTAGGCTAGA+TGG | - | chr3_3:66907923-66907942 | Msa0466350:intron | 35.0% | |
| GAGGGAAAACATTTGAAAAC+TGG | - | chr3_3:66907970-66907989 | Msa0466350:intron | 35.0% | |
| GGAAAACATTTGAAAACTGG+AGG | - | chr3_3:66907973-66907992 | Msa0466350:intron | 35.0% | |
| ATTTAACTCCAAGTTCTCAG+TGG | + | chr3_3:66908004-66908023 | None:intergenic | 35.0% | |
| ACTGAGAACTTGGAGTTAAA+TGG | - | chr3_3:66908003-66908022 | Msa0466350:intron | 35.0% | |
| !! | GCAGCATCCATTCATTTTTA+GGG | + | chr3_3:66908076-66908095 | None:intergenic | 35.0% |
| !! | TGCAGCATCCATTCATTTTT+AGG | + | chr3_3:66908077-66908096 | None:intergenic | 35.0% |
| ATAGCCATTGGGACATTAAA+AGG | + | chr3_3:66908225-66908244 | None:intergenic | 35.0% | |
| AAGCTTTCAAAAATGGCCTT+GGG | + | chr3_3:66908556-66908575 | None:intergenic | 35.0% | |
| AAAGCTTTCAAAAATGGCCT+TGG | + | chr3_3:66908557-66908576 | None:intergenic | 35.0% | |
| !!! | AAGGCCATTTTTGAAAGCTT+TGG | - | chr3_3:66908556-66908575 | Msa0466350:intron | 35.0% |
| ATCTGAGTATCAATTGATGC+AGG | - | chr3_3:66908654-66908673 | Msa0466350:CDS | 35.0% | |
| AGAATGCACAAGTTCTATCA+GGG | - | chr3_3:66908762-66908781 | Msa0466350:CDS | 35.0% | |
| AAGTTTCAAAGTGAGACTAC+TGG | - | chr3_3:66908808-66908827 | Msa0466350:intron | 35.0% | |
| GATAGAATATGTGCATTCTC+GGG | + | chr3_3:66908884-66908903 | None:intergenic | 35.0% | |
| AAAATGAATACACGGGACAT+TGG | - | chr3_3:66909085-66909104 | Msa0466350:intron | 35.0% | |
| GCAAAACGCACAAAAAGAAA+CGG | - | chr3_3:66909127-66909146 | Msa0466350:CDS | 35.0% | |
| CAACACCTAAGAAATCAAAG+AGG | - | chr3_3:66909175-66909194 | Msa0466350:CDS | 35.0% | |
| GTATAGCTTCTTTCTTCTGT+AGG | + | chr3_3:66909225-66909244 | None:intergenic | 35.0% | |
| GTAAAGCTTCTTTCTTCTGT+AGG | + | chr3_3:66909294-66909313 | None:intergenic | 35.0% | |
| CCTCTACTCTTAGATTTCTT+TGG | + | chr3_3:66909321-66909340 | None:intergenic | 35.0% | |
| CCAAAGAAATCTAAGAGTAG+AGG | - | chr3_3:66909318-66909337 | Msa0466350:intron | 35.0% | |
| AAGAAATCTAAGAGTAGAGG+TGG | - | chr3_3:66909321-66909340 | Msa0466350:intron | 35.0% | |
| ! | GAGCATTTTACTGAAGAAAG+AGG | - | chr3_3:66909354-66909373 | Msa0466350:intron | 35.0% |
| TTAAAGTCTCTATCTTCTGC+AGG | + | chr3_3:66909432-66909451 | None:intergenic | 35.0% | |
| AATATTTATGCGAGTGGTAG+TGG | - | chr3_3:66909573-66909592 | Msa0466350:intron | 35.0% | |
| !!! | GAAATTTTAGAACTCCAACC+TGG | + | chr3_3:66909609-66909628 | None:intergenic | 35.0% |
| !! | GGAGTTCTAAAATTTCTAGG+GGG | - | chr3_3:66909613-66909632 | Msa0466350:intron | 35.0% |
| AGATATTCGTCATCAAGGTT+TGG | - | chr3_3:66909696-66909715 | Msa0466350:intron | 35.0% | |
| !! | ACTCCAATGATGATGGATAT+AGG | - | chr3_3:66909721-66909740 | Msa0466350:intron | 35.0% |
| TCTCCTATATCCATCATCAT+TGG | + | chr3_3:66909727-66909746 | None:intergenic | 35.0% | |
| TGGATATAGGAGAAGTAGTT+CGG | - | chr3_3:66909734-66909753 | Msa0466350:intron | 35.0% | |
| AAGGATATAGGAGAGGTAAT+TGG | - | chr3_3:66909784-66909803 | Msa0466350:CDS | 35.0% | |
| GTTACGAACATAAGTTCAAC+AGG | + | chr3_3:66910016-66910035 | None:intergenic | 35.0% | |
| ACCCTGCTACATATCTTAAA+AGG | + | chr3_3:66910058-66910077 | None:intergenic | 35.0% | |
| TGAGGTGTGCTGTAAGATTA+GGG | - | chr3_3:66905558-66905577 | Msa0466350:three_prime_UTR | 40.0% | |
| CTTGAGACTCAGATCTTGAT+TGG | + | chr3_3:66905739-66905758 | None:intergenic | 40.0% | |
| TTTCGATTCTCGTGTTCGAA+GGG | + | chr3_3:66905775-66905794 | None:intergenic | 40.0% | |
| ATCAGAAGCTCAGATTTCTG+AGG | + | chr3_3:66905825-66905844 | None:intergenic | 40.0% | |
| TCAGAAATCTGAGCTTCTGA+TGG | - | chr3_3:66905824-66905843 | Msa0466350:CDS | 40.0% | |
| CCAACACATACACTTCGATT+TGG | + | chr3_3:66905876-66905895 | None:intergenic | 40.0% | |
| CCAAATCGAAGTGTATGTGT+TGG | - | chr3_3:66905873-66905892 | Msa0466350:CDS | 40.0% | |
| ATCCAAGTGATTCTCCAAGT+GGG | + | chr3_3:66906340-66906359 | None:intergenic | 40.0% | |
| AATCCAAGTGATTCTCCAAG+TGG | + | chr3_3:66906341-66906360 | None:intergenic | 40.0% | |
| ! | TACAGAGAAGCATGAATCTG+TGG | - | chr3_3:66906435-66906454 | Msa0466350:CDS | 40.0% |
| TACCACAAGGAATGCTTAGT+TGG | - | chr3_3:66906566-66906585 | Msa0466350:CDS | 40.0% | |
| ACCACAAGGAATGCTTAGTT+GGG | - | chr3_3:66906567-66906586 | Msa0466350:CDS | 40.0% | |
| TCTGGAGGGTCAAAATATCT+TGG | + | chr3_3:66906628-66906647 | None:intergenic | 40.0% | |
| AACTCACCACATACATAGCA+TGG | + | chr3_3:66906730-66906749 | None:intergenic | 40.0% | |
| ATGCTATGTATGTGGTGAGT+TGG | - | chr3_3:66906729-66906748 | Msa0466350:CDS | 40.0% | |
| TGCTATGTATGTGGTGAGTT+GGG | - | chr3_3:66906730-66906749 | Msa0466350:CDS | 40.0% | |
| GTATACTGAGATCTGCTTGA+TGG | - | chr3_3:66906820-66906839 | Msa0466350:CDS | 40.0% | |
| ! | ATCTGCTTGATGGTCATGTA+GGG | - | chr3_3:66906830-66906849 | Msa0466350:CDS | 40.0% |
| TGCTTGAAGTGTGGAAATTC+TGG | - | chr3_3:66906947-66906966 | Msa0466350:intron | 40.0% | |
| GCTTGAAGTGTGGAAATTCT+GGG | - | chr3_3:66906948-66906967 | Msa0466350:intron | 40.0% | |
| ! | GGCATGATATGTTTTCATGC+AGG | - | chr3_3:66906969-66906988 | Msa0466350:intron | 40.0% |
| TTATTCACCGGATGATCTCA+AGG | - | chr3_3:66906997-66907016 | Msa0466350:intron | 40.0% | |
| GTTCTTGGTTGAGTTTGCAT+TGG | - | chr3_3:66907061-66907080 | Msa0466350:intron | 40.0% | |
| !! | CAGCATTGACACAACATAAG+TGG | + | chr3_3:66907192-66907211 | None:intergenic | 40.0% |
| CTGTATACTTTCTCGTACGA+GGG | - | chr3_3:66907358-66907377 | Msa0466350:intron | 40.0% | |
| AATGTCAGTGCTGTCAATTG+CGG | - | chr3_3:66907521-66907540 | Msa0466350:intron | 40.0% | |
| ! | TGCGGATTGCAAAAAATAGC+GGG | - | chr3_3:66907539-66907558 | Msa0466350:intron | 40.0% |
| !! | ATAGAGGAGCAGTAGTTTTG+TGG | + | chr3_3:66907584-66907603 | None:intergenic | 40.0% |
| TTGTCAAATAGCGGCTATAG+AGG | + | chr3_3:66907600-66907619 | None:intergenic | 40.0% | |
| CAGAAAAAGGGACTTCGTAA+AGG | - | chr3_3:66907647-66907666 | Msa0466350:intron | 40.0% | |
| AAGAATAGTAGGCTAGATGG+AGG | - | chr3_3:66907926-66907945 | Msa0466350:intron | 40.0% | |
| ATGCTGCATCGTAACTAACA+AGG | - | chr3_3:66908089-66908108 | Msa0466350:intron | 40.0% | |
| TGCCTTAAGTGTAGTAGCTA+AGG | - | chr3_3:66908168-66908187 | Msa0466350:intron | 40.0% | |
| GACCTTAGCTACTACACTTA+AGG | + | chr3_3:66908173-66908192 | None:intergenic | 40.0% | |
| GGTGCTTACATGTGTGTATT+TGG | + | chr3_3:66908195-66908214 | None:intergenic | 40.0% | |
| TTGGGACATTAAAAGGTGGA+GGG | + | chr3_3:66908218-66908237 | None:intergenic | 40.0% | |
| ATTGGGACATTAAAAGGTGG+AGG | + | chr3_3:66908219-66908238 | None:intergenic | 40.0% | |
| ! | TCCACCTTTTAATGTCCCAA+TGG | - | chr3_3:66908218-66908237 | Msa0466350:intron | 40.0% |
| GCTTTAACCTTACAAGAGGA+TGG | + | chr3_3:66908261-66908280 | None:intergenic | 40.0% | |
| ! | GCAAGCTTTAACCTTACAAG+AGG | + | chr3_3:66908265-66908284 | None:intergenic | 40.0% |
| ATGGGAGCTAAAACTTTGAG+TGG | - | chr3_3:66908440-66908459 | Msa0466350:CDS | 40.0% | |
| !! | CTTTTGAAAGCTTTGACCCA+AGG | - | chr3_3:66908537-66908556 | Msa0466350:intron | 40.0% |
| TGGGCCAAAGCTTTCAAAAA+TGG | + | chr3_3:66908563-66908582 | None:intergenic | 40.0% | |
| !! | TTTTTGAAAGCTTTGGCCCA+AGG | - | chr3_3:66908563-66908582 | Msa0466350:intron | 40.0% |
| ATAGCTGAGAAAATGGCCTT+GGG | + | chr3_3:66908582-66908601 | None:intergenic | 40.0% | |
| TATAGCTGAGAAAATGGCCT+TGG | + | chr3_3:66908583-66908602 | None:intergenic | 40.0% | |
| AATTGATGCAGGCATGTTCA+AGG | - | chr3_3:66908665-66908684 | Msa0466350:CDS | 40.0% | |
| GAGAATGCACAAGTTCTATC+AGG | - | chr3_3:66908761-66908780 | Msa0466350:CDS | 40.0% | |
| TATCAGGGTACAATTGATGC+AGG | - | chr3_3:66908777-66908796 | Msa0466350:intron | 40.0% | |
| ! | CCTCTCCTCTTTGATTTCTT+AGG | + | chr3_3:66909183-66909202 | None:intergenic | 40.0% |
| CCTAAGAAATCAAAGAGGAG+AGG | - | chr3_3:66909180-66909199 | Msa0466350:CDS | 40.0% | |
| AAGAAATCAAAGAGGAGAGG+TGG | - | chr3_3:66909183-66909202 | Msa0466350:CDS | 40.0% | |
| AATCAAAAAGTAGAGGTGGC+TGG | - | chr3_3:66909256-66909275 | Msa0466350:intron | 40.0% | |
| CCTCTGCTCTTGAATTTCAT+GGG | + | chr3_3:66909459-66909478 | None:intergenic | 40.0% | |
| ACCTCTGCTCTTGAATTTCA+TGG | + | chr3_3:66909460-66909479 | None:intergenic | 40.0% | |
| ATGAAATTCAAGAGCAGAGG+TGG | - | chr3_3:66909459-66909478 | Msa0466350:intron | 40.0% | |
| TGGAAGAAGAGAATTCTCCA+GGG | + | chr3_3:66909500-66909519 | None:intergenic | 40.0% | |
| TTGGAAGAAGAGAATTCTCC+AGG | + | chr3_3:66909501-66909520 | None:intergenic | 40.0% | |
| TCTCTTCTTCCAAGTCCAAT+AGG | - | chr3_3:66909508-66909527 | Msa0466350:intron | 40.0% | |
| !! | GTTCTAAAATTTCTAGGGGG+TGG | - | chr3_3:66909616-66909635 | Msa0466350:intron | 40.0% |
| ! | TAAAATTTCTAGGGGGTGGA+TGG | - | chr3_3:66909620-66909639 | Msa0466350:intron | 40.0% |
| ! | AAAATTTCTAGGGGGTGGAT+GGG | - | chr3_3:66909621-66909640 | Msa0466350:intron | 40.0% |
| TTTGGCAACTCCAATGATGA+TGG | - | chr3_3:66909714-66909733 | Msa0466350:intron | 40.0% | |
| ACTCTAGTGGTGAAGGATAT+AGG | - | chr3_3:66909772-66909791 | Msa0466350:CDS | 40.0% | |
| GATATAGGAGAGGTAATTGG+TGG | - | chr3_3:66909787-66909806 | Msa0466350:CDS | 40.0% | |
| TTGCCACAAGTCTTTCAGTT+CGG | - | chr3_3:66909929-66909948 | Msa0466350:CDS | 40.0% | |
| CTGAGGTGTGCTGTAAGATT+AGG | - | chr3_3:66905557-66905576 | Msa0466350:three_prime_UTR | 45.0% | |
| ! | TCAATTTGGAACTCCCTAGG+CGG | - | chr3_3:66905591-66905610 | Msa0466350:three_prime_UTR | 45.0% |
| !! | CGAGATTGTCGATTGATTCG+TGG | + | chr3_3:66905659-66905678 | None:intergenic | 45.0% |
| ACTCCTTCACTCGTATTCAG+CGG | - | chr3_3:66905690-66905709 | Msa0466350:three_prime_UTR | 45.0% | |
| AGATCTGAGTCTCAAGATCG+TGG | - | chr3_3:66905743-66905762 | Msa0466350:three_prime_UTR | 45.0% | |
| GTTTCGATTCTCGTGTTCGA+AGG | + | chr3_3:66905776-66905795 | None:intergenic | 45.0% | |
| ! | AGAAGCTCAGATTTCTGAGG+AGG | + | chr3_3:66905822-66905841 | None:intergenic | 45.0% |
| ! | CACTCTGATGCTGCCTTTTT+AGG | + | chr3_3:66906185-66906204 | None:intergenic | 45.0% |
| TTTAATGGCTGCAGAGCAAG+AGG | - | chr3_3:66906393-66906412 | Msa0466350:CDS | 45.0% | |
| GAAGCATGAATCTGTGGAAC+TGG | - | chr3_3:66906441-66906460 | Msa0466350:CDS | 45.0% | |
| GGATCAGATAGGTGACAACA+TGG | - | chr3_3:66906474-66906493 | Msa0466350:CDS | 45.0% | |
| ACCCAACTAAGCATTCCTTG+TGG | + | chr3_3:66906571-66906590 | None:intergenic | 45.0% | |
| TTGACCCTCCAGATAGTAGT+TGG | - | chr3_3:66906635-66906654 | Msa0466350:intron | 45.0% | |
| TGACCCTCCAGATAGTAGTT+GGG | - | chr3_3:66906636-66906655 | Msa0466350:intron | 45.0% | |
| ! | TGGGGAGCATGCTATAATTG+TGG | - | chr3_3:66906655-66906674 | Msa0466350:intron | 45.0% |
| AGCATGCTATAATTGTGGCG+AGG | - | chr3_3:66906660-66906679 | Msa0466350:intron | 45.0% | |
| TGCTATAATTGTGGCGAGGA+AGG | - | chr3_3:66906664-66906683 | Msa0466350:intron | 45.0% | |
| TAAACTGTACAGCAGCGAAG+CGG | - | chr3_3:66906698-66906717 | Msa0466350:intron | 45.0% | |
| AGGTATGTCTGCTTGCCTAT+TGG | - | chr3_3:66906776-66906795 | Msa0466350:CDS | 45.0% | |
| !! | GCTTGCCTATTGGCTTATGA+AGG | - | chr3_3:66906786-66906805 | Msa0466350:CDS | 45.0% |
| ! | GATCTGCTTGATGGTCATGT+AGG | - | chr3_3:66906829-66906848 | Msa0466350:CDS | 45.0% |
| AGTTGCTACGTCTGCAAGAA+AGG | - | chr3_3:66906857-66906876 | Msa0466350:CDS | 45.0% | |
| ! | TCTCTGGACAGTCTTTTGCA+CGG | + | chr3_3:66906889-66906908 | None:intergenic | 45.0% |
| ! | ACGGGCTTCTAAAAGTCTGA+CGG | - | chr3_3:66906922-66906941 | Msa0466350:CDS | 45.0% |
| ! | TCAGATGGGTCATACTGGTT+CGG | - | chr3_3:66907252-66907271 | Msa0466350:intron | 45.0% |
| ! | CCTCGTACGAGAAAGTATAC+AGG | + | chr3_3:66907360-66907379 | None:intergenic | 45.0% |
| CCTGTATACTTTCTCGTACG+AGG | - | chr3_3:66907357-66907376 | Msa0466350:intron | 45.0% | |
| GTCAAGCTGAAGCTTGATGT+AGG | - | chr3_3:66907782-66907801 | Msa0466350:intron | 45.0% | |
| ! | TGGTAGGGCCTTATCTTTGT+TGG | - | chr3_3:66907865-66907884 | Msa0466350:intron | 45.0% |
| !! | GGCCTTATCTTTGTTGGTTC+AGG | - | chr3_3:66907871-66907890 | Msa0466350:intron | 45.0% |
| AGTCCACTAGTTACACGTAG+AGG | - | chr3_3:66907951-66907970 | Msa0466350:intron | 45.0% | |
| GTCCACTAGTTACACGTAGA+GGG | - | chr3_3:66907952-66907971 | Msa0466350:intron | 45.0% | |
| TTCCCTCTACGTGTAACTAG+TGG | + | chr3_3:66907957-66907976 | None:intergenic | 45.0% | |
| TGGGACATTAAAAGGTGGAG+GGG | + | chr3_3:66908217-66908236 | None:intergenic | 45.0% | |
| GCCATTGGGACATTAAAAGG+TGG | + | chr3_3:66908222-66908241 | None:intergenic | 45.0% | |
| GATGGACACTGATAGCCATT+GGG | + | chr3_3:66908236-66908255 | None:intergenic | 45.0% | |
| ! | TGATGGACACTGATAGCCAT+TGG | + | chr3_3:66908237-66908256 | None:intergenic | 45.0% |
| CCTTACAAGAGGATGGTTGA+TGG | + | chr3_3:66908254-66908273 | None:intergenic | 45.0% | |
| CCATCAACCATCCTCTTGTA+AGG | - | chr3_3:66908251-66908270 | Msa0466350:intron | 45.0% | |
| AAGGTTGCAAGGTGAGACTA+CGG | - | chr3_3:66908684-66908703 | Msa0466350:CDS | 45.0% | |
| CCTATAGCACAAAGTAGGTG+TGG | + | chr3_3:66908716-66908735 | None:intergenic | 45.0% | |
| CCACACCTACTTTGTGCTAT+AGG | - | chr3_3:66908713-66908732 | Msa0466350:CDS | 45.0% | |
| CCACACCTATAGCACAAAGT+AGG | + | chr3_3:66908721-66908740 | None:intergenic | 45.0% | |
| CCTACTTTGTGCTATAGGTG+TGG | - | chr3_3:66908718-66908737 | Msa0466350:CDS | 45.0% | |
| TTGTGCTATAGGTGTGGTGA+AGG | - | chr3_3:66908724-66908743 | Msa0466350:CDS | 45.0% | |
| TCAAAGTGAGACTACTGGTG+CGG | - | chr3_3:66908813-66908832 | Msa0466350:intron | 45.0% | |
| CCTATAGCACAAAGTAGGTG+TGG | + | chr3_3:66908716-66908735 | None:intergenic | 45.0% | |
| CCACACCTACTTTGTGCTAT+AGG | - | chr3_3:66908713-66908732 | Msa0466350:CDS | 45.0% | |
| CCACACCTATAGCACAAAGT+AGG | + | chr3_3:66908721-66908740 | None:intergenic | 45.0% | |
| CCTACTTTGTGCTATAGGTG+TGG | - | chr3_3:66908718-66908737 | Msa0466350:CDS | 45.0% | |
| TTGTGCTATAGGTGTGGTGA+AGG | - | chr3_3:66908724-66908743 | Msa0466350:CDS | 45.0% | |
| TGTGCTATAGGTGTGGTGAA+GGG | - | chr3_3:66908725-66908744 | Msa0466350:CDS | 45.0% | |
| AAGCCTCTTTCGTCTGTATG+AGG | + | chr3_3:66909153-66909172 | None:intergenic | 45.0% | |
| AATCTAAGAGTAGAGGTGGC+TGG | - | chr3_3:66909325-66909344 | Msa0466350:intron | 45.0% | |
| TCTGCTCTTCGATTTCTTGG+GGG | + | chr3_3:66909388-66909407 | None:intergenic | 45.0% | |
| CTCTGCTCTTCGATTTCTTG+GGG | + | chr3_3:66909389-66909408 | None:intergenic | 45.0% | |
| CCTCTGCTCTTCGATTTCTT+GGG | + | chr3_3:66909390-66909409 | None:intergenic | 45.0% | |
| ACCTCTGCTCTTCGATTTCT+TGG | + | chr3_3:66909391-66909410 | None:intergenic | 45.0% | |
| AAGAAATCGAAGAGCAGAGG+TGG | - | chr3_3:66909390-66909409 | Msa0466350:intron | 45.0% | |
| CCCATGAAATTCAAGAGCAG+AGG | - | chr3_3:66909456-66909475 | Msa0466350:intron | 45.0% | |
| CTGAAGCCTCATATTCCCAA+GGG | - | chr3_3:66909652-66909671 | Msa0466350:intron | 45.0% | |
| AGTAGTTCGGCATCAAGGTT+TGG | - | chr3_3:66909747-66909766 | Msa0466350:intron | 45.0% | |
| TCAAGGTTTGGCAACTCTAG+TGG | - | chr3_3:66909759-66909778 | Msa0466350:CDS | 45.0% | |
| TTTGGCAACTCTAGTGGTGA+AGG | - | chr3_3:66909765-66909784 | Msa0466350:CDS | 45.0% | |
| AGTGGTGAAGGATATAGGAG+AGG | - | chr3_3:66909777-66909796 | Msa0466350:CDS | 45.0% | |
| TCCACCCTTCAGGAAGTAAT+GGG | - | chr3_3:66909952-66909971 | Msa0466350:CDS | 45.0% | |
| TACGCCCATTACTTCCTGAA+GGG | + | chr3_3:66909959-66909978 | None:intergenic | 45.0% | |
| GAAGGAGAAGTCGAAAGCCA+AGG | - | chr3_3:66905626-66905645 | Msa0466350:three_prime_UTR | 50.0% | |
| TGATTCGTGGTCTCTTGCCT+TGG | + | chr3_3:66905646-66905665 | None:intergenic | 50.0% | |
| GCTGAATACGAGTGAAGGAG+TGG | + | chr3_3:66905691-66905710 | None:intergenic | 50.0% | |
| AGGTAAAACGGCGTCGTTAG+AGG | + | chr3_3:66905802-66905821 | None:intergenic | 50.0% | |
| CACCCACTTGGAGAATCACT+TGG | - | chr3_3:66906335-66906354 | Msa0466350:CDS | 50.0% | |
| GAAGCGAGTGTGGATCAGAT+AGG | - | chr3_3:66906463-66906482 | Msa0466350:CDS | 50.0% | |
| GACCCTCCAGATAGTAGTTG+GGG | - | chr3_3:66906637-66906656 | Msa0466350:intron | 50.0% | |
| CTCCCCAACTACTATCTGGA+GGG | + | chr3_3:66906642-66906661 | None:intergenic | 50.0% | |
| CATGCTCCCCAACTACTATC+TGG | + | chr3_3:66906646-66906665 | None:intergenic | 50.0% | |
| TCTTGCAGACGTAGCAACTC+TGG | + | chr3_3:66906856-66906875 | None:intergenic | 50.0% | |
| TGCTACGTCTGCAAGAAAGG+TGG | - | chr3_3:66906860-66906879 | Msa0466350:CDS | 50.0% | |
| ! | CAGAGAAGCACATGACTGCA+CGG | - | chr3_3:66906903-66906922 | Msa0466350:CDS | 50.0% |
| ! | AGAGAAGCACATGACTGCAC+GGG | - | chr3_3:66906904-66906923 | Msa0466350:CDS | 50.0% |
| CTGACGGTATGCTTGAAGTG+TGG | - | chr3_3:66906938-66906957 | Msa0466350:CDS | 50.0% | |
| CAATGCTGCTGATGCAACAC+CGG | - | chr3_3:66907204-66907223 | Msa0466350:intron | 50.0% | |
| AATGCTGCTGATGCAACACC+GGG | - | chr3_3:66907205-66907224 | Msa0466350:intron | 50.0% | |
| TGTGGTCAGATGGGTCATAC+TGG | - | chr3_3:66907247-66907266 | Msa0466350:intron | 50.0% | |
| TATGCACCTTTCCGGAGATC+CGG | - | chr3_3:66907296-66907315 | Msa0466350:intron | 50.0% | |
| TTATCTCCGGATCTCCGGAA+AGG | + | chr3_3:66907305-66907324 | None:intergenic | 50.0% | |
| GATGCTTATCTCCGGATCTC+CGG | + | chr3_3:66907310-66907329 | None:intergenic | 50.0% | |
| !!! | GGAGCAGTAGTTTTGTGGCA+TGG | + | chr3_3:66907579-66907598 | None:intergenic | 50.0% |
| !! | CCTGGTATTGGTAACCGTAG+CGG | - | chr3_3:66907758-66907777 | Msa0466350:intron | 50.0% |
| AGGTCGAACCACTGAGAACT+TGG | - | chr3_3:66907993-66908012 | Msa0466350:intron | 50.0% | |
| GGGACATTAAAAGGTGGAGG+GGG | + | chr3_3:66908216-66908235 | None:intergenic | 50.0% | |
| CAGGCATGTTCAAGGTTGCA+AGG | - | chr3_3:66908673-66908692 | Msa0466350:CDS | 50.0% | |
| AGGTTGCAAGGTGAGACTAC+GGG | - | chr3_3:66908685-66908704 | Msa0466350:CDS | 50.0% | |
| TGCTATAGGTGTGGTGAAGG+AGG | - | chr3_3:66908727-66908746 | Msa0466350:CDS | 50.0% | |
| GCTATAGGTGTGGTGAAGGA+GGG | - | chr3_3:66908728-66908747 | Msa0466350:CDS | 50.0% | |
| GTGCTATAGGTGTGGTGAAG+GGG | - | chr3_3:66908726-66908745 | Msa0466350:CDS | 50.0% | |
| TGCTATAGGTGTGGTGAAGG+GGG | - | chr3_3:66908727-66908746 | Msa0466350:CDS | 50.0% | |
| ! | ACTTCCGTGTTTTCCTCCAC+AGG | - | chr3_3:66909008-66909027 | Msa0466350:intron | 50.0% |
| CTATTCTTCTTCCCAGCCTG+TGG | + | chr3_3:66909027-66909046 | None:intergenic | 50.0% | |
| TTGGTCTGCACCTCTCGATA+TGG | - | chr3_3:66909104-66909123 | Msa0466350:intron | 50.0% | |
| TGGTCTGCACCTCTCGATAT+GGG | - | chr3_3:66909105-66909124 | Msa0466350:intron | 50.0% | |
| ! | TGCGTTTTGCCCATATCGAG+AGG | + | chr3_3:66909117-66909136 | None:intergenic | 50.0% |
| AATCAAAGAGGAGAGGTGGC+TGG | - | chr3_3:66909187-66909206 | Msa0466350:CDS | 50.0% | |
| AAGTAGAGGTGGCTGGACAA+TGG | - | chr3_3:66909263-66909282 | Msa0466350:intron | 50.0% | |
| TAAGAGTAGAGGTGGCTGGA+CGG | - | chr3_3:66909329-66909348 | Msa0466350:intron | 50.0% | |
| CCCAAGAAATCGAAGAGCAG+AGG | - | chr3_3:66909387-66909406 | Msa0466350:intron | 50.0% | |
| AATTCAAGAGCAGAGGTGGC+TGG | - | chr3_3:66909463-66909482 | Msa0466350:intron | 50.0% | |
| CCAACTGGTCCTATTGGACT+TGG | + | chr3_3:66909520-66909539 | None:intergenic | 50.0% | |
| CCAAGTCCAATAGGACCAGT+TGG | - | chr3_3:66909517-66909536 | Msa0466350:intron | 50.0% | |
| AGGACTCCAACTGGTCCTAT+TGG | + | chr3_3:66909526-66909545 | None:intergenic | 50.0% | |
| CCTTGGGAATATGAGGCTTC+AGG | + | chr3_3:66909654-66909673 | None:intergenic | 50.0% | |
| CCTGAAGCCTCATATTCCCA+AGG | - | chr3_3:66909651-66909670 | Msa0466350:intron | 50.0% | |
| GGAGAAGTAGTTCGGCATCA+AGG | - | chr3_3:66909742-66909761 | Msa0466350:intron | 50.0% | |
| GGACCGAACTGAAAGACTTG+TGG | + | chr3_3:66909935-66909954 | None:intergenic | 50.0% | |
| GTCCACCCTTCAGGAAGTAA+TGG | - | chr3_3:66909951-66909970 | Msa0466350:CDS | 50.0% | |
| GTACGCCCATTACTTCCTGA+AGG | + | chr3_3:66909960-66909979 | None:intergenic | 50.0% | |
| CTGCCGCTGAATACGAGTGA+AGG | + | chr3_3:66905696-66905715 | None:intergenic | 55.0% | |
| AATGGCTGCAGAGCAAGAGG+TGG | - | chr3_3:66906396-66906415 | Msa0466350:CDS | 55.0% | |
| TGTGGAACTGGAAGCGAGTG+TGG | - | chr3_3:66906453-66906472 | Msa0466350:CDS | 55.0% | |
| GCTCCCCAACTACTATCTGG+AGG | + | chr3_3:66906643-66906662 | None:intergenic | 55.0% | |
| CGTGCAGTCATGTGCTTCTC+TGG | + | chr3_3:66906905-66906924 | None:intergenic | 55.0% | |
| CCGCTACGGTTACCAATACC+AGG | + | chr3_3:66907761-66907780 | None:intergenic | 55.0% | |
| GCTTCAGCTTGACTCCGCTA+CGG | + | chr3_3:66907775-66907794 | None:intergenic | 55.0% | |
| CCAGCCTGTGGAGGAAAACA+CGG | + | chr3_3:66909015-66909034 | None:intergenic | 55.0% | |
| ! | CGTGTTTTCCTCCACAGGCT+GGG | - | chr3_3:66909013-66909032 | Msa0466350:intron | 55.0% |
| TTCTTCTTCCCAGCCTGTGG+AGG | + | chr3_3:66909024-66909043 | None:intergenic | 55.0% | |
| CGGCCTCATACAGACGAAAG+AGG | - | chr3_3:66909147-66909166 | Msa0466350:CDS | 55.0% | |
| AAGAGTAGAGGTGGCTGGAC+GGG | - | chr3_3:66909330-66909349 | Msa0466350:intron | 55.0% | |
| AATCGAAGAGCAGAGGTGGC+TGG | - | chr3_3:66909394-66909413 | Msa0466350:intron | 55.0% | |
| TAGGACCAGTTGGAGTCCTG+CGG | - | chr3_3:66909527-66909546 | Msa0466350:intron | 55.0% | |
| !! | GGTAGTGGAAGTCGAACTCC+AGG | - | chr3_3:66909588-66909607 | Msa0466350:intron | 55.0% |
| GTGGAAGTCGAACTCCAGGT+TGG | - | chr3_3:66909592-66909611 | Msa0466350:intron | 55.0% | |
| GGCTGACCCTTGGGAATATG+AGG | + | chr3_3:66909661-66909680 | None:intergenic | 55.0% | |
| !! | GAAAGCATCGGCTGACCCTT+GGG | + | chr3_3:66909670-66909689 | None:intergenic | 55.0% |
| TTCAGTTCGGTCCACCCTTC+AGG | - | chr3_3:66909942-66909961 | Msa0466350:CDS | 55.0% | |
| GCCCATTACTTCCTGAAGGG+TGG | + | chr3_3:66909956-66909975 | None:intergenic | 55.0% | |
| TTGGAACTCCCTAGGCGGCA+TGG | - | chr3_3:66905596-66905615 | Msa0466350:three_prime_UTR | 60.0% | |
| TGGAACTCCCTAGGCGGCAT+GGG | - | chr3_3:66905597-66905616 | Msa0466350:three_prime_UTR | 60.0% | |
| CGAGTGAAGGAGTGGAAGCG+CGG | + | chr3_3:66905683-66905702 | None:intergenic | 60.0% | |
| ! | CCGTGTTTTCCTCCACAGGC+TGG | - | chr3_3:66909012-66909031 | Msa0466350:intron | 60.0% |
| GAGGAGAGGTGGCTGGATGA+CGG | - | chr3_3:66909194-66909213 | Msa0466350:CDS | 60.0% | |
| AGAGTAGAGGTGGCTGGACG+GGG | - | chr3_3:66909331-66909350 | Msa0466350:intron | 60.0% | |
| GAGCAGAGGTGGCTGGACAA+CGG | - | chr3_3:66909401-66909420 | Msa0466350:intron | 60.0% | |
| CAAGAGCAGAGGTGGCTGGA+TGG | - | chr3_3:66909467-66909486 | Msa0466350:intron | 60.0% | |
| AGGACCAGTTGGAGTCCTGC+GGG | - | chr3_3:66909528-66909547 | Msa0466350:intron | 60.0% | |
| !! | GGAAAGCATCGGCTGACCCT+TGG | + | chr3_3:66909671-66909690 | None:intergenic | 60.0% |
| AACTCCCTAGGCGGCATGGG+AGG | - | chr3_3:66905600-66905619 | Msa0466350:three_prime_UTR | 65.0% | |
| ACTCCCTAGGCGGCATGGGA+GGG | - | chr3_3:66905601-66905620 | Msa0466350:three_prime_UTR | 65.0% | |
| GAGTAGAGGTGGCTGGACGG+GGG | - | chr3_3:66909332-66909351 | Msa0466350:intron | 65.0% | |
| GGCTGGATGGCTGATCACCC+TGG | - | chr3_3:66909480-66909499 | Msa0466350:intron | 65.0% | |
| GGACCAGTTGGAGTCCTGCG+GGG | - | chr3_3:66909529-66909548 | Msa0466350:intron | 65.0% | |
| TGTCCCCGCAGGACTCCAAC+TGG | + | chr3_3:66909535-66909554 | None:intergenic | 65.0% | |
| CTAGCAGATGGTGTCCCCGC+AGG | + | chr3_3:66909546-66909565 | None:intergenic | 65.0% | |
| CCTCCCTCCCATGCCGCCTA+GGG | + | chr3_3:66905607-66905626 | None:intergenic | 70.0% | |
| TCCTCCCTCCCATGCCGCCT+AGG | + | chr3_3:66905608-66905627 | None:intergenic | 70.0% | |
| AGGCGGCATGGGAGGGAGGA+AGG | - | chr3_3:66905608-66905627 | Msa0466350:three_prime_UTR | 70.0% | |
| CCCTAGGCGGCATGGGAGGG+AGG | - | chr3_3:66905604-66905623 | Msa0466350:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 66905499 | 66910136 | 66905499 | ID=Msa0466350;Name=Msa0466350 |
| chr3_3 | mRNA | 66905499 | 66910136 | 66905499 | ID=Msa0466350-mRNA-1;Parent=Msa0466350;Name=Msa0466350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=116|1|1|1|1|1|7|324|616 |
| chr3_3 | exon | 66905499 | 66906605 | 66905499 | ID=Msa0466350-mRNA-1:exon:15349;Parent=Msa0466350-mRNA-1 |
| chr3_3 | exon | 66906729 | 66906959 | 66906729 | ID=Msa0466350-mRNA-1:exon:15348;Parent=Msa0466350-mRNA-1 |
| chr3_3 | exon | 66908362 | 66908478 | 66908362 | ID=Msa0466350-mRNA-1:exon:15347;Parent=Msa0466350-mRNA-1 |
| chr3_3 | exon | 66908617 | 66908784 | 66908617 | ID=Msa0466350-mRNA-1:exon:15346;Parent=Msa0466350-mRNA-1 |
| chr3_3 | exon | 66908858 | 66909016 | 66908858 | ID=Msa0466350-mRNA-1:exon:15345;Parent=Msa0466350-mRNA-1 |
| chr3_3 | exon | 66909122 | 66909244 | 66909122 | ID=Msa0466350-mRNA-1:exon:15344;Parent=Msa0466350-mRNA-1 |
| chr3_3 | exon | 66909751 | 66910136 | 66909751 | ID=Msa0466350-mRNA-1:exon:15343;Parent=Msa0466350-mRNA-1 |
| chr3_3 | five_prime_UTR | 66910021 | 66910136 | 66910021 | ID=Msa0466350-mRNA-1:five_prime_utr;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66909751 | 66910020 | 66909751 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66909122 | 66909244 | 66909122 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66908858 | 66909016 | 66908858 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66908617 | 66908784 | 66908617 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66908362 | 66908478 | 66908362 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66906729 | 66906959 | 66906729 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | CDS | 66905823 | 66906605 | 66905823 | ID=Msa0466350-mRNA-1:cds;Parent=Msa0466350-mRNA-1 |
| chr3_3 | three_prime_UTR | 66905499 | 66905822 | 66905499 | ID=Msa0466350-mRNA-1:three_prime_utr;Parent=Msa0466350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
