Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456430 | XP_003600465.1 | 98.901 | 364 | 4 | 0 | 1 | 364 | 1 | 364 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456430 | G7IYA2 | 98.901 | 364 | 4 | 0 | 1 | 364 | 1 | 364 | 0.0 | 743 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0456430 | 0.809041 | 2.301631e-50 | -8.615850e-47 |
| Msa0017730 | Msa0456430 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
| Msa0020390 | Msa0456430 | 0.805684 | 1.185130e-49 | -8.615850e-47 |
| Msa0029260 | Msa0456430 | 0.820903 | 5.364038e-53 | -8.615850e-47 |
| Msa0029630 | Msa0456430 | 0.826943 | 2.055272e-54 | -8.615850e-47 |
| Msa0033880 | Msa0456430 | 0.827677 | 1.370633e-54 | -8.615850e-47 |
| Msa0038000 | Msa0456430 | 0.813861 | 2.065630e-51 | -8.615850e-47 |
| Msa0038440 | Msa0456430 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0043860 | Msa0456430 | 0.818965 | 1.488610e-52 | -8.615850e-47 |
| Msa0056270 | Msa0456430 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0068000 | Msa0456430 | 0.805289 | 1.434239e-49 | -8.615850e-47 |
| Msa0068020 | Msa0456430 | 0.815835 | 7.542783e-52 | -8.615850e-47 |
| Msa0074750 | Msa0456430 | 0.808027 | 3.788596e-50 | -8.615850e-47 |
| Msa0076040 | Msa0456430 | 0.800761 | 1.238290e-48 | -8.615850e-47 |
| Msa0079920 | Msa0456430 | 0.802696 | 4.964188e-49 | -8.615850e-47 |
| Msa0091610 | Msa0456430 | 0.833113 | 6.425545e-56 | -8.615850e-47 |
| Msa0093010 | Msa0456430 | 0.847222 | 1.325934e-59 | -8.615850e-47 |
| Msa0093420 | Msa0456430 | 0.805802 | 1.119663e-49 | -8.615850e-47 |
| Msa0115370 | Msa0456430 | 0.851190 | 1.042805e-60 | -8.615850e-47 |
| Msa0125450 | Msa0456430 | 0.817690 | 2.893586e-52 | -8.615850e-47 |
| Msa0125540 | Msa0456430 | 0.809141 | 2.191416e-50 | -8.615850e-47 |
| Msa0127850 | Msa0456430 | 0.841588 | 4.338363e-58 | -8.615850e-47 |
| Msa0136120 | Msa0456430 | 0.801914 | 7.191273e-49 | -8.615850e-47 |
| Msa0149440 | Msa0456430 | 0.823118 | 1.645111e-53 | -8.615850e-47 |
| Msa0166750 | Msa0456430 | 0.804372 | 2.229317e-49 | -8.615850e-47 |
| Msa0169300 | Msa0456430 | 0.821218 | 4.539127e-53 | -8.615850e-47 |
| Msa0174000 | Msa0456430 | 0.808545 | 2.938550e-50 | -8.615850e-47 |
| Msa0177960 | Msa0456430 | 0.823799 | 1.139940e-53 | -8.615850e-47 |
| Msa0179030 | Msa0456430 | 0.811799 | 5.843470e-51 | -8.615850e-47 |
| Msa0183870 | Msa0456430 | 0.817260 | 3.615623e-52 | -8.615850e-47 |
| Msa0190590 | Msa0456430 | 0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa0191070 | Msa0456430 | 0.804406 | 2.193238e-49 | -8.615850e-47 |
| Msa0215990 | Msa0456430 | 0.830803 | 2.390162e-55 | -8.615850e-47 |
| Msa0217670 | Msa0456430 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
| Msa0230520 | Msa0456430 | 0.807417 | 5.107476e-50 | -8.615850e-47 |
| Msa0364050 | Msa0456430 | 0.835357 | 1.758475e-56 | -8.615850e-47 |
| Msa0376820 | Msa0456430 | 0.820094 | 8.223784e-53 | -8.615850e-47 |
| Msa0377820 | Msa0456430 | 0.850610 | 1.519727e-60 | -8.615850e-47 |
| Msa0385500 | Msa0456430 | 0.838389 | 2.960602e-57 | -8.615850e-47 |
| Msa0389510 | Msa0456430 | 0.858258 | 9.319385e-63 | -8.615850e-47 |
| Msa0413530 | Msa0456430 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
| Msa0416960 | Msa0456430 | 0.801050 | 1.081088e-48 | -8.615850e-47 |
| Msa0423750 | Msa0456430 | 0.823501 | 1.338930e-53 | -8.615850e-47 |
| Msa0426580 | Msa0456430 | 0.804137 | 2.495808e-49 | -8.615850e-47 |
| Msa0443390 | Msa0456430 | 0.802571 | 5.266124e-49 | -8.615850e-47 |
| Msa0456430 | Msa0462600 | 0.825691 | 4.082735e-54 | -8.615850e-47 |
| Msa0456430 | Msa0466350 | 0.832627 | 8.486130e-56 | -8.615850e-47 |
| Msa0456430 | Msa0470530 | 0.819803 | 9.585568e-53 | -8.615850e-47 |
| Msa0456430 | Msa0471960 | 0.818908 | 1.533524e-52 | -8.615850e-47 |
| Msa0456430 | Msa0472130 | 0.814020 | 1.905746e-51 | -8.615850e-47 |
| Msa0456430 | Msa0472930 | 0.840482 | 8.466682e-58 | -8.615850e-47 |
| Msa0456430 | Msa0484740 | 0.846824 | 1.704251e-59 | -8.615850e-47 |
| Msa0456430 | Msa0503640 | 0.811884 | 5.600386e-51 | -8.615850e-47 |
| Msa0456430 | Msa0511770 | 0.802296 | 5.999501e-49 | -8.615850e-47 |
| Msa0456430 | Msa0531250 | 0.820940 | 5.257715e-53 | -8.615850e-47 |
| Msa0456430 | Msa0531650 | 0.809241 | 2.085123e-50 | -8.615850e-47 |
| Msa0456430 | Msa0544540 | 0.829146 | 6.060557e-55 | -8.615850e-47 |
| Msa0456430 | Msa0559790 | 0.801100 | 1.055746e-48 | -8.615850e-47 |
| Msa0456430 | Msa0560500 | 0.812126 | 4.960440e-51 | -8.615850e-47 |
| Msa0456430 | Msa0580230 | 0.865160 | 7.222421e-65 | -8.615850e-47 |
| Msa0456430 | Msa0580280 | 0.852766 | 3.722327e-61 | -8.615850e-47 |
| Msa0456430 | Msa0588090 | 0.805253 | 1.459726e-49 | -8.615850e-47 |
| Msa0456430 | Msa0593700 | 0.829506 | 4.955250e-55 | -8.615850e-47 |
| Msa0456430 | Msa0610550 | 0.885855 | 5.669946e-72 | -8.615850e-47 |
| Msa0456430 | Msa0614510 | 0.804675 | 1.928127e-49 | -8.615850e-47 |
| Msa0456430 | Msa0615580 | 0.802302 | 5.984482e-49 | -8.615850e-47 |
| Msa0456430 | Msa0622790 | 0.807770 | 4.296588e-50 | -8.615850e-47 |
| Msa0456430 | Msa0628420 | 0.824153 | 9.415906e-54 | -8.615850e-47 |
| Msa0456430 | Msa0633570 | 0.847737 | 9.571168e-60 | -8.615850e-47 |
| Msa0456430 | Msa0662630 | 0.836221 | 1.062705e-56 | -8.615850e-47 |
| Msa0456430 | Msa0666230 | 0.825628 | 4.225541e-54 | -8.615850e-47 |
| Msa0456430 | Msa0672100 | 0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0456430 | Msa0689440 | 0.818972 | 1.482825e-52 | -8.615850e-47 |
| Msa0456430 | Msa0690770 | 0.873955 | 9.843734e-68 | -8.615850e-47 |
| Msa0456430 | Msa0693210 | 0.901131 | 3.651489e-78 | -8.615850e-47 |
| Msa0456430 | Msa0697080 | 0.820093 | 8.226616e-53 | -8.615850e-47 |
| Msa0456430 | Msa0699190 | 0.806093 | 9.724305e-50 | -8.615850e-47 |
| Msa0456430 | Msa0706500 | 0.829703 | 4.438955e-55 | -8.615850e-47 |
| Msa0456430 | Msa0752700 | 0.817949 | 2.528526e-52 | -8.615850e-47 |
| Msa0456430 | Msa0766080 | 0.814956 | 1.183222e-51 | -8.615850e-47 |
| Msa0456430 | Msa0808800 | 0.817706 | 2.869082e-52 | -8.615850e-47 |
| Msa0456430 | Msa0822170 | 0.812888 | 3.380393e-51 | -8.615850e-47 |
| Msa0456430 | Msa0822180 | 0.827525 | 1.491101e-54 | -8.615850e-47 |
| Msa0456430 | Msa0828680 | 0.801134 | 1.038979e-48 | -8.615850e-47 |
| Msa0456430 | Msa0829220 | 0.806930 | 6.474690e-50 | -8.615850e-47 |
| Msa0456430 | Msa0831100 | 0.813631 | 2.321710e-51 | -8.615850e-47 |
| Msa0456430 | Msa0834260 | 0.812825 | 3.489481e-51 | -8.615850e-47 |
| Msa0456430 | Msa0838370 | 0.818297 | 2.109841e-52 | -8.615850e-47 |
| Msa0456430 | Msa0858440 | 0.832466 | 9.304262e-56 | -8.615850e-47 |
| Msa0456430 | Msa0958000 | 0.809652 | 1.702182e-50 | -8.615850e-47 |
| Msa0456430 | Msa0960830 | 0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa0456430 | Msa0963020 | 0.834674 | 2.614864e-56 | -8.615850e-47 |
| Msa0456430 | Msa0968440 | 0.824269 | 8.843839e-54 | -8.615850e-47 |
| Msa0456430 | Msa0980540 | 0.810819 | 9.533249e-51 | -8.615850e-47 |
| Msa0456430 | Msa0994290 | 0.819985 | 8.711433e-53 | -8.615850e-47 |
| Msa0456430 | Msa0997430 | 0.821682 | 3.545458e-53 | -8.615850e-47 |
| Msa0456430 | Msa1025940 | 0.808185 | 3.506655e-50 | -8.615850e-47 |
| Msa0456430 | Msa1039900 | 0.841188 | 5.530408e-58 | -8.615850e-47 |
| Msa0456430 | Msa1072710 | 0.815657 | 8.262566e-52 | -8.615850e-47 |
| Msa0456430 | Msa1123350 | 0.834282 | 3.280119e-56 | -8.615850e-47 |
| Msa0456430 | Msa1165780 | 0.819282 | 1.260615e-52 | -8.615850e-47 |
| Msa0456430 | Msa1175350 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0456430 | Msa1202580 | 0.807559 | 4.765561e-50 | -8.615850e-47 |
| Msa0456430 | Msa1208020 | 0.803512 | 3.365416e-49 | -8.615850e-47 |
| Msa0456430 | Msa1227690 | 0.803926 | 2.760255e-49 | -8.615850e-47 |
| Msa0456430 | Msa1233850 | 0.810390 | 1.180474e-50 | -8.615850e-47 |
| Msa0456430 | Msa1344310 | 0.804648 | 1.952791e-49 | -8.615850e-47 |
| Msa0456430 | Msa1362420 | 0.844394 | 7.768307e-59 | -8.615850e-47 |
| Msa0456430 | Msa1369190 | 0.837643 | 4.604270e-57 | -8.615850e-47 |
| Msa0456430 | Msa1376650 | 0.800716 | 1.264805e-48 | -8.615850e-47 |
| Msa0456430 | Msa1411950 | 0.835509 | 1.610403e-56 | -8.615850e-47 |
| Msa0456430 | Msa1413260 | 0.837824 | 4.139277e-57 | -8.615850e-47 |
| Msa0456430 | Msa1425670 | 0.833865 | 4.171654e-56 | -8.615850e-47 |
| Msa0456430 | Msa1435440 | 0.813463 | 2.527270e-51 | -8.615850e-47 |
| Msa0456430 | Msa1435770 | 0.817822 | 2.701437e-52 | -8.615850e-47 |
| Msa0456430 | Msa1456050 | 0.823971 | 1.039261e-53 | -8.615850e-47 |
| Msa0456430 | Msa1462860 | 0.828527 | 8.553895e-55 | -8.615850e-47 |
| Msa0244970 | Msa0456430 | 0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa0244980 | Msa0456430 | 0.840067 | 1.087137e-57 | -8.615850e-47 |
| Msa0245060 | Msa0456430 | 0.808955 | 2.401626e-50 | -8.615850e-47 |
| Msa0245580 | Msa0456430 | 0.841107 | 5.806852e-58 | -8.615850e-47 |
| Msa0257490 | Msa0456430 | 0.811605 | 6.438447e-51 | -8.615850e-47 |
| Msa0266360 | Msa0456430 | 0.801821 | 7.515313e-49 | -8.615850e-47 |
| Msa0269470 | Msa0456430 | 0.841305 | 5.151738e-58 | -8.615850e-47 |
| Msa0275360 | Msa0456430 | 0.804382 | 2.219185e-49 | -8.615850e-47 |
| Msa0283420 | Msa0456430 | 0.814306 | 1.647962e-51 | -8.615850e-47 |
| Msa0284180 | Msa0456430 | 0.808852 | 2.526182e-50 | -8.615850e-47 |
| Msa0296250 | Msa0456430 | 0.805777 | 1.133389e-49 | -8.615850e-47 |
| Msa0296790 | Msa0456430 | 0.825053 | 5.781960e-54 | -8.615850e-47 |
| Msa0304590 | Msa0456430 | 0.800069 | 1.713423e-48 | -8.615850e-47 |
| Msa0304660 | Msa0456430 | 0.803966 | 2.709157e-49 | -8.615850e-47 |
| Msa0320590 | Msa0456430 | 0.815229 | 1.028936e-51 | -8.615850e-47 |
| Msa0321690 | Msa0456430 | 0.823344 | 1.457334e-53 | -8.615850e-47 |
| Msa0331700 | Msa0456430 | 0.802576 | 5.253543e-49 | -8.615850e-47 |
| Msa0348830 | Msa0456430 | 0.835279 | 1.840172e-56 | -8.615850e-47 |
| Msa0363060 | Msa0456430 | 0.825570 | 4.361277e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456430 | MtrunA17_Chr3g0103381 | 98.901 | 364 | 4 | 0 | 1 | 364 | 1 | 364 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456430 | AT3G20920.1 | 69.274 | 358 | 98 | 5 | 1 | 349 | 1 | 355 | 0.0 | 509 |
| Msa0456430 | AT3G20920.2 | 68.994 | 358 | 98 | 6 | 1 | 349 | 1 | 354 | 1.38e-179 | 503 |
Find 86 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTAATTTAATATATTAT+TGG | 0.198740 | 3_3:-50000951 | None:intergenic |
| CTTTCCTCTTCATCTTTCTT+TGG | 0.213188 | 3_3:-50004277 | None:intergenic |
| TGCGAGAGTTGTTCAGATTT+TGG | 0.213419 | 3_3:+50004254 | Msa0456430:CDS |
| TATATTATTGGACTATTATT+AGG | 0.228700 | 3_3:-50000939 | None:intergenic |
| TCTCCTAGTTTAGCCTTGTC+TGG | 0.298819 | 3_3:+50004621 | Msa0456430:CDS |
| GTAGAGAGAGGATGAGAAAA+AGG | 0.303368 | 3_3:-50002887 | None:intergenic |
| ATGATAAACAGTATGATTAA+TGG | 0.322992 | 3_3:+50004817 | Msa0456430:CDS |
| ATCTCGAAACCAACTCCTTA+TGG | 0.329067 | 3_3:-50001829 | None:intergenic |
| AAAATCCTTGTCGTCCATTT+CGG | 0.335549 | 3_3:-50004301 | None:intergenic |
| TCCGGAGGTTAAAGACATTC+TGG | 0.339148 | 3_3:+50001922 | Msa0456430:CDS |
| GCTTCCTCCGCAAGGATGTT+GGG | 0.342543 | 3_3:-50004226 | None:intergenic |
| CTTGCCCTTGCAGCTTCATC+AGG | 0.350247 | 3_3:-50004373 | None:intergenic |
| GCCGTTCTATATATTCTTGT+TGG | 0.360213 | 3_3:+50004184 | Msa0456430:CDS |
| TCCTTATCGTTTCGGCTGTC+AGG | 0.374966 | 3_3:+50004976 | Msa0456430:three_prime_UTR |
| TTTAGCCTTGTCTGGGATGA+TGG | 0.378491 | 3_3:+50004629 | Msa0456430:CDS |
| TGATAAACAGTATGATTAAT+GGG | 0.387342 | 3_3:+50004818 | Msa0456430:exon |
| GCCTCACAAGGCAGCACAAC+AGG | 0.389832 | 3_3:+50004693 | Msa0456430:CDS |
| CCTCCTCCGACGTCCCTCCT+AGG | 0.389932 | 3_3:+50001115 | Msa0456430:CDS |
| TTAATACTTTACTCGTGTGC+TGG | 0.398269 | 3_3:+50002861 | Msa0456430:CDS |
| TTCTTGTTGGAAAGCGGATC+TGG | 0.418629 | 3_3:+50004197 | Msa0456430:CDS |
| CTCCTAGTTTAGCCTTGTCT+GGG | 0.426101 | 3_3:+50004622 | Msa0456430:CDS |
| GGGACGTCGGAGGAGGGATC+TGG | 0.432011 | 3_3:-50001108 | None:intergenic |
| TGCTTCCTCCGCAAGGATGT+TGG | 0.436657 | 3_3:-50004227 | None:intergenic |
| TGTGAAGAAGGATGTGTATC+AGG | 0.438572 | 3_3:+50001784 | Msa0456430:CDS |
| ATGAAGAGGAAAGGCCGAAA+TGG | 0.448763 | 3_3:+50004287 | Msa0456430:CDS |
| TGAAATAATAACAGTAAAAG+TGG | 0.457976 | 3_3:+50004916 | Msa0456430:three_prime_UTR |
| GCCTGACAGCCGAAACGATA+AGG | 0.459581 | 3_3:-50004977 | None:intergenic |
| TCAGAAACAAGCTGTGAAGA+AGG | 0.469702 | 3_3:+50001772 | Msa0456430:intron |
| CCTAGGAGGGACGTCGGAGG+AGG | 0.470461 | 3_3:-50001115 | None:intergenic |
| TCCAGAATGTCTTTAACCTC+CGG | 0.479317 | 3_3:-50001923 | None:intergenic |
| TGAGAAAGTGAGAGACCATA+AGG | 0.479734 | 3_3:+50001814 | Msa0456430:CDS |
| TTTCTGGCCTGTGTTAACAT+TGG | 0.480409 | 3_3:+50002797 | Msa0456430:CDS |
| ATTAAGAGCTTGCAGCTATG+AGG | 0.484553 | 3_3:-50002843 | None:intergenic |
| TAAGGAGTTGGTTTCGAGAT+GGG | 0.487533 | 3_3:+50001832 | Msa0456430:CDS |
| GGGAAAATTTCTAAATGAGC+AGG | 0.489313 | 3_3:-50002067 | None:intergenic |
| GGTTAAAGACATTCTGGAAT+CGG | 0.497490 | 3_3:+50001928 | Msa0456430:CDS |
| GCCTTGTGAGGCAGCATCAG+TGG | 0.498248 | 3_3:-50004682 | None:intergenic |
| ACAAGGCAGCACAACAGGAC+CGG | 0.505921 | 3_3:+50004698 | Msa0456430:CDS |
| CTCCTCCGACGTCCCTCCTA+GGG | 0.510314 | 3_3:+50001116 | Msa0456430:CDS |
| TAATACTTTACTCGTGTGCT+GGG | 0.520840 | 3_3:+50002862 | Msa0456430:CDS |
| TCCTGTTGTGCTGCCTTGTG+AGG | 0.527738 | 3_3:-50004694 | None:intergenic |
| TACTGTTCATATTACTGTTG+AGG | 0.529799 | 3_3:+50004341 | Msa0456430:CDS |
| TCGGTTGGAGCTTCATGCTC+CGG | 0.530823 | 3_3:-50004717 | None:intergenic |
| TCATTGATGATGTTCTTGAA+TGG | 0.531192 | 3_3:+50004598 | Msa0456430:CDS |
| AGTGAGAGACCATAAGGAGT+TGG | 0.536744 | 3_3:+50001820 | Msa0456430:CDS |
| TCCACTGATGCTGCCTCACA+AGG | 0.554001 | 3_3:+50004681 | Msa0456430:CDS |
| CTGATGAAGCTGCAAGGGCA+AGG | 0.555464 | 3_3:+50004374 | Msa0456430:CDS |
| TATATATTCTTGTTGGAAAG+CGG | 0.556470 | 3_3:+50004191 | Msa0456430:CDS |
| CTTCCTCCGCAAGGATGTTG+GGG | 0.556772 | 3_3:-50004225 | None:intergenic |
| TTGTAAAACGACATCCACTT+TGG | 0.558359 | 3_3:+50002757 | Msa0456430:CDS |
| TTAAGAGCTTGCAGCTATGA+GGG | 0.560242 | 3_3:-50002842 | None:intergenic |
| ATTGAAAACATAGAGGATGT+AGG | 0.560982 | 3_3:+50004789 | Msa0456430:CDS |
| AAGACATTCTGGAATCGGAC+AGG | 0.563072 | 3_3:+50001933 | Msa0456430:CDS |
| CTTGCAGCTATGAGGGTACA+CGG | 0.568526 | 3_3:-50002835 | None:intergenic |
| GATAGGAGTGTCTGCCAAAG+TGG | 0.568616 | 3_3:-50002771 | None:intergenic |
| ATCCCAGACAAGGCTAAACT+AGG | 0.569530 | 3_3:-50004624 | None:intergenic |
| CTAGGAGGGACGTCGGAGGA+GGG | 0.570443 | 3_3:-50001114 | None:intergenic |
| TTGGCCAAAGAAAGATGAAG+AGG | 0.571861 | 3_3:+50004273 | Msa0456430:CDS |
| ATAAGGAGTTGGTTTCGAGA+TGG | 0.575545 | 3_3:+50001831 | Msa0456430:CDS |
| TGCACCTGATGAAGCTGCAA+GGG | 0.580240 | 3_3:+50004369 | Msa0456430:CDS |
| CAGAATGTGACTAATGCCAC+AGG | 0.580423 | 3_3:+50004657 | Msa0456430:CDS |
| TTTAGTTCGCTGTGATCGTG+TGG | 0.588939 | 3_3:+50002003 | Msa0456430:CDS |
| GCAGTGTTGCTTCCTCCGCA+AGG | 0.589718 | 3_3:-50004234 | None:intergenic |
| ATGCACCTGATGAAGCTGCA+AGG | 0.597119 | 3_3:+50004368 | Msa0456430:CDS |
| TCCAACAAGAATATATAGAA+CGG | 0.598898 | 3_3:-50004185 | None:intergenic |
| GATCTGGTGCGGAGGAGCGT+CGG | 0.599719 | 3_3:-50001092 | None:intergenic |
| AGAAACCCTAGGAGGGACGT+CGG | 0.603935 | 3_3:-50001121 | None:intergenic |
| AGAAGTCATTGAAAACATAG+AGG | 0.607410 | 3_3:+50004782 | Msa0456430:CDS |
| GGAGGAGGGATCTGGTGCGG+AGG | 0.612395 | 3_3:-50001100 | None:intergenic |
| GTCGGAGGAGGGATCTGGTG+CGG | 0.613470 | 3_3:-50001103 | None:intergenic |
| GAAGAAATCATCGGGAGGCG+CGG | 0.613727 | 3_3:+50001053 | Msa0456430:CDS |
| CAAAGAAAGATGAAGAGGAA+AGG | 0.627979 | 3_3:+50004278 | Msa0456430:CDS |
| GAAGCTCCAACCGATAGTAA+TGG | 0.629679 | 3_3:+50004726 | Msa0456430:CDS |
| AACCCTAGGAGGGACGTCGG+AGG | 0.635303 | 3_3:-50001118 | None:intergenic |
| CAAATAGCCAATGTTAACAC+AGG | 0.636543 | 3_3:-50002804 | None:intergenic |
| TTTGTCCATCATCCCAGACA+AGG | 0.641989 | 3_3:-50004634 | None:intergenic |
| GAGAGAGAGAAACCCTAGGA+GGG | 0.654726 | 3_3:-50001128 | None:intergenic |
| GGCAGCATCAGTGGACCCTG+TGG | 0.656336 | 3_3:-50004673 | None:intergenic |
| ACTTACTCAACAGTAGAGAG+AGG | 0.660007 | 3_3:-50002899 | None:intergenic |
| AAAGGCCGAAATGGACGACA+AGG | 0.665317 | 3_3:+50004296 | Msa0456430:CDS |
| TTTCCCCAACATCCTTGCGG+AGG | 0.667890 | 3_3:+50004222 | Msa0456430:CDS |
| TTGCAGCTATGAGGGTACAC+GGG | 0.668997 | 3_3:-50002834 | None:intergenic |
| AGAGAGAGAGAAACCCTAGG+AGG | 0.684963 | 3_3:-50001129 | None:intergenic |
| GGACAGGAGTTTAGAAACAG+AGG | 0.691778 | 3_3:+50001949 | Msa0456430:CDS |
| AAAATGAAGAAATCATCGGG+AGG | 0.704093 | 3_3:+50001048 | Msa0456430:exon |
| AGAATGTGACTAATGCCACA+GGG | 0.741132 | 3_3:+50004658 | Msa0456430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATTTAATATATTAT+TGG | - | chr3_3:50000954-50000973 | None:intergenic | 0.0% |
| !! | ATATTAATTTAATATATTAT+TGG | - | chr3_3:50000954-50000973 | None:intergenic | 0.0% |
| !! | TGTAAAATTGTAAATTATTT+AGG | + | chr3_3:50001567-50001586 | Msa0456430:intron | 10.0% |
| !! | TATATAAATATATATCCTTA+TGG | + | chr3_3:50002946-50002965 | Msa0456430:intron | 10.0% |
| !! | ATATAAATATATATCCTTAT+GGG | + | chr3_3:50002947-50002966 | Msa0456430:intron | 10.0% |
| !!! | GATTTTTTTCTTAATAATAA+CGG | + | chr3_3:50003612-50003631 | Msa0456430:intron | 10.0% |
| !! | TGTAAAATTGTAAATTATTT+AGG | + | chr3_3:50001567-50001586 | Msa0456430:intron | 10.0% |
| !! | TATATAAATATATATCCTTA+TGG | + | chr3_3:50002946-50002965 | Msa0456430:intron | 10.0% |
| !! | ATATAAATATATATCCTTAT+GGG | + | chr3_3:50002947-50002966 | Msa0456430:intron | 10.0% |
| !!! | GATTTTTTTCTTAATAATAA+CGG | + | chr3_3:50003612-50003631 | Msa0456430:intron | 10.0% |
| !! | TATATTATTGGACTATTATT+AGG | - | chr3_3:50000942-50000961 | None:intergenic | 15.0% |
| !!! | TCTGAATTTGTTTATTTTTA+TGG | + | chr3_3:50001670-50001689 | Msa0456430:intron | 15.0% |
| !!! | CTGAATTTGTTTATTTTTAT+GGG | + | chr3_3:50001671-50001690 | Msa0456430:intron | 15.0% |
| !!! | AATTTTTCTCATATACAATA+TGG | - | chr3_3:50002516-50002535 | None:intergenic | 15.0% |
| !!! | AATTTCTAAAATTATTGTCA+TGG | - | chr3_3:50003287-50003306 | None:intergenic | 15.0% |
| !! | CAACACAAATATTAATATTT+AGG | - | chr3_3:50003543-50003562 | None:intergenic | 15.0% |
| !! | CTAAATATTAATATTTGTGT+TGG | + | chr3_3:50003541-50003560 | Msa0456430:intron | 15.0% |
| !!! | AACTAAATATTTTAAGTACT+AGG | - | chr3_3:50004073-50004092 | None:intergenic | 15.0% |
| !! | TAAATTCATTCATAAAGTTT+AGG | - | chr3_3:50004405-50004424 | None:intergenic | 15.0% |
| !! | AACTTTATGAATGAATTTAT+AGG | + | chr3_3:50004406-50004425 | Msa0456430:intron | 15.0% |
| !! | TATATTATTGGACTATTATT+AGG | - | chr3_3:50000942-50000961 | None:intergenic | 15.0% |
| !!! | TCTGAATTTGTTTATTTTTA+TGG | + | chr3_3:50001670-50001689 | Msa0456430:intron | 15.0% |
| !!! | CTGAATTTGTTTATTTTTAT+GGG | + | chr3_3:50001671-50001690 | Msa0456430:intron | 15.0% |
| !!! | AATTTTTCTCATATACAATA+TGG | - | chr3_3:50002516-50002535 | None:intergenic | 15.0% |
| !!! | AATTTCTAAAATTATTGTCA+TGG | - | chr3_3:50003287-50003306 | None:intergenic | 15.0% |
| !! | CAACACAAATATTAATATTT+AGG | - | chr3_3:50003543-50003562 | None:intergenic | 15.0% |
| !! | CTAAATATTAATATTTGTGT+TGG | + | chr3_3:50003541-50003560 | Msa0456430:intron | 15.0% |
| !!! | AACTAAATATTTTAAGTACT+AGG | - | chr3_3:50004073-50004092 | None:intergenic | 15.0% |
| !! | TAAATTCATTCATAAAGTTT+AGG | - | chr3_3:50004405-50004424 | None:intergenic | 15.0% |
| !! | AACTTTATGAATGAATTTAT+AGG | + | chr3_3:50004406-50004425 | Msa0456430:intron | 15.0% |
| !!! | ACTATTATTAGGTAGATTTT+AGG | - | chr3_3:50000931-50000950 | None:intergenic | 20.0% |
| !! | GAAAAAAATGAAGAAATCAT+CGG | + | chr3_3:50001044-50001063 | Msa0456430:exon | 20.0% |
| !! | AAAAAAATGAAGAAATCATC+GGG | + | chr3_3:50001045-50001064 | Msa0456430:exon | 20.0% |
| !!! | TTTTAAGCTGCTTTTTTAAT+TGG | + | chr3_3:50001464-50001483 | Msa0456430:intron | 20.0% |
| !!! | TTTAAGCTGCTTTTTTAATT+GGG | + | chr3_3:50001465-50001484 | Msa0456430:intron | 20.0% |
| !!! | TTTTCTATGTTCGAAATTTA+TGG | + | chr3_3:50002253-50002272 | Msa0456430:intron | 20.0% |
| !! | ATAAAACCAAAAGAATAAGA+CGG | - | chr3_3:50002397-50002416 | None:intergenic | 20.0% |
| !! | TGAATATATGTAGTTATGAA+TGG | + | chr3_3:50003043-50003062 | Msa0456430:intron | 20.0% |
| !!! | CTTACACTGTTATTTTTAAT+AGG | + | chr3_3:50003155-50003174 | Msa0456430:intron | 20.0% |
| !! | CAAAATAAATACACATGTTA+TGG | - | chr3_3:50003778-50003797 | None:intergenic | 20.0% |
| !!! | TATTTATTTTGTGTGCTTTT+GGG | + | chr3_3:50003787-50003806 | Msa0456430:intron | 20.0% |
| !! | ATCTTCAATAAACATCTAAT+TGG | - | chr3_3:50003858-50003877 | None:intergenic | 20.0% |
| !! | TAATGAAAATACATACTACA+AGG | - | chr3_3:50003953-50003972 | None:intergenic | 20.0% |
| !! | AAAATTATAGAACAAGGTAA+AGG | - | chr3_3:50004029-50004048 | None:intergenic | 20.0% |
| !! | GAAGTTAAAATTATAGAACA+AGG | - | chr3_3:50004035-50004054 | None:intergenic | 20.0% |
| !! | ATGTTAAAAAAATATCCATG+AGG | - | chr3_3:50004142-50004161 | None:intergenic | 20.0% |
| !!! | TTTTTTAACATTGTAGTAAG+AGG | + | chr3_3:50004151-50004170 | Msa0456430:intron | 20.0% |
| !! | ATGATAAACAGTATGATTAA+TGG | + | chr3_3:50004817-50004836 | Msa0456430:CDS | 20.0% |
| !! | TGATAAACAGTATGATTAAT+GGG | + | chr3_3:50004818-50004837 | Msa0456430:exon | 20.0% |
| !!! | ACTTTTACACTCAAATAAAA+AGG | - | chr3_3:50004888-50004907 | None:intergenic | 20.0% |
| !! | TGAAATAATAACAGTAAAAG+TGG | + | chr3_3:50004916-50004935 | Msa0456430:three_prime_UTR | 20.0% |
| !!! | GGAAAACATTTTTCTTAATA+AGG | - | chr3_3:50004959-50004978 | None:intergenic | 20.0% |
| !!! | ACTATTATTAGGTAGATTTT+AGG | - | chr3_3:50000931-50000950 | None:intergenic | 20.0% |
| !! | GAAAAAAATGAAGAAATCAT+CGG | + | chr3_3:50001044-50001063 | Msa0456430:exon | 20.0% |
| !! | AAAAAAATGAAGAAATCATC+GGG | + | chr3_3:50001045-50001064 | Msa0456430:exon | 20.0% |
| !!! | TTTTAAGCTGCTTTTTTAAT+TGG | + | chr3_3:50001464-50001483 | Msa0456430:intron | 20.0% |
| !!! | TTTAAGCTGCTTTTTTAATT+GGG | + | chr3_3:50001465-50001484 | Msa0456430:intron | 20.0% |
| !!! | TTTTCTATGTTCGAAATTTA+TGG | + | chr3_3:50002253-50002272 | Msa0456430:intron | 20.0% |
| !! | ATAAAACCAAAAGAATAAGA+CGG | - | chr3_3:50002397-50002416 | None:intergenic | 20.0% |
| !! | TGAATATATGTAGTTATGAA+TGG | + | chr3_3:50003043-50003062 | Msa0456430:intron | 20.0% |
| !!! | CTTACACTGTTATTTTTAAT+AGG | + | chr3_3:50003155-50003174 | Msa0456430:intron | 20.0% |
| !! | CAAAATAAATACACATGTTA+TGG | - | chr3_3:50003778-50003797 | None:intergenic | 20.0% |
| !!! | TATTTATTTTGTGTGCTTTT+GGG | + | chr3_3:50003787-50003806 | Msa0456430:intron | 20.0% |
| !! | ATCTTCAATAAACATCTAAT+TGG | - | chr3_3:50003858-50003877 | None:intergenic | 20.0% |
| !! | TAATGAAAATACATACTACA+AGG | - | chr3_3:50003953-50003972 | None:intergenic | 20.0% |
| !! | AAAATTATAGAACAAGGTAA+AGG | - | chr3_3:50004029-50004048 | None:intergenic | 20.0% |
| !! | GAAGTTAAAATTATAGAACA+AGG | - | chr3_3:50004035-50004054 | None:intergenic | 20.0% |
| !! | ATGTTAAAAAAATATCCATG+AGG | - | chr3_3:50004142-50004161 | None:intergenic | 20.0% |
| !!! | TTTTTTAACATTGTAGTAAG+AGG | + | chr3_3:50004151-50004170 | Msa0456430:intron | 20.0% |
| !! | ATGATAAACAGTATGATTAA+TGG | + | chr3_3:50004817-50004836 | Msa0456430:CDS | 20.0% |
| !! | TGATAAACAGTATGATTAAT+GGG | + | chr3_3:50004818-50004837 | Msa0456430:exon | 20.0% |
| !!! | ACTTTTACACTCAAATAAAA+AGG | - | chr3_3:50004888-50004907 | None:intergenic | 20.0% |
| !! | TGAAATAATAACAGTAAAAG+TGG | + | chr3_3:50004916-50004935 | Msa0456430:three_prime_UTR | 20.0% |
| !!! | GGAAAACATTTTTCTTAATA+AGG | - | chr3_3:50004959-50004978 | None:intergenic | 20.0% |
| ! | TCTAAGAATTTGAGAAGAAA+AGG | - | chr3_3:50001230-50001249 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTATGATGTTTT+TGG | + | chr3_3:50001746-50001765 | Msa0456430:intron | 25.0% |
| ! | AGCAAGAAAAATTACTTACA+GGG | - | chr3_3:50002090-50002109 | None:intergenic | 25.0% |
| ! | AGAGGTTAAGCAAATTAAAA+TGG | + | chr3_3:50002226-50002245 | Msa0456430:intron | 25.0% |
| !!! | GTTTCAATGATTAGTTTGTT+TGG | + | chr3_3:50002662-50002681 | Msa0456430:intron | 25.0% |
| !! | ACAATTTGATCATCTTTTTC+AGG | + | chr3_3:50002692-50002711 | Msa0456430:intron | 25.0% |
| !!! | TGCAAAAAAAGCATCATTTT+CGG | - | chr3_3:50002730-50002749 | None:intergenic | 25.0% |
| !!! | AAAATGATGCTTTTTTTGCA+TGG | + | chr3_3:50002730-50002749 | Msa0456430:CDS | 25.0% |
| ! | TTCATCAGAAAATGAATACA+TGG | - | chr3_3:50003027-50003046 | None:intergenic | 25.0% |
| ! | ATATATGTAGTTATGAATGG+AGG | + | chr3_3:50003046-50003065 | Msa0456430:intron | 25.0% |
| ! | TGATAATATACATGGTAGAT+TGG | - | chr3_3:50003105-50003124 | None:intergenic | 25.0% |
| ! | GATATGGATGATAATATACA+TGG | - | chr3_3:50003113-50003132 | None:intergenic | 25.0% |
| ! | TCCATATCAGTTATAATAGA+CGG | + | chr3_3:50003125-50003144 | Msa0456430:intron | 25.0% |
| !! | AATTCAATGCTGTTTAATAG+GGG | - | chr3_3:50003227-50003246 | None:intergenic | 25.0% |
| !! | CAATTCAATGCTGTTTAATA+GGG | - | chr3_3:50003228-50003247 | None:intergenic | 25.0% |
| !! | TCAATTCAATGCTGTTTAAT+AGG | - | chr3_3:50003229-50003248 | None:intergenic | 25.0% |
| ! | CTTCAAAATCTATGGAAAAA+TGG | - | chr3_3:50003256-50003275 | None:intergenic | 25.0% |
| !! | CATTTTTCCATAGATTTTGA+AGG | + | chr3_3:50003254-50003273 | Msa0456430:intron | 25.0% |
| ! | TGTTTAATTGTTTATCCATG+TGG | + | chr3_3:50003357-50003376 | Msa0456430:intron | 25.0% |
| ! | GTTTAATTGTTTATCCATGT+GGG | + | chr3_3:50003358-50003377 | Msa0456430:intron | 25.0% |
| ! | ACACAAATCAGAATAATCTA+GGG | - | chr3_3:50003421-50003440 | None:intergenic | 25.0% |
| ! | ATTAATATTTGTGTTGGAAG+AGG | + | chr3_3:50003547-50003566 | Msa0456430:intron | 25.0% |
| ! | TTAATATTTGTGTTGGAAGA+GGG | + | chr3_3:50003548-50003567 | Msa0456430:intron | 25.0% |
| !! | ATGGATACTGTGTATTTTAT+AGG | - | chr3_3:50003759-50003778 | None:intergenic | 25.0% |
| !!! | GTATTTATTTTGTGTGCTTT+TGG | + | chr3_3:50003786-50003805 | Msa0456430:intron | 25.0% |
| ! | TTCATTATTTCCGTATCTAT+TGG | + | chr3_3:50003966-50003985 | Msa0456430:intron | 25.0% |
| ! | TCCAACAAGAATATATAGAA+CGG | - | chr3_3:50004188-50004207 | None:intergenic | 25.0% |
| ! | TATATATTCTTGTTGGAAAG+CGG | + | chr3_3:50004191-50004210 | Msa0456430:CDS | 25.0% |
| ! | TCAGAGCTTAAATTCTTATT+TGG | + | chr3_3:50004466-50004485 | Msa0456430:intron | 25.0% |
| !! | AGCTTAAATTCTTATTTGGT+TGG | + | chr3_3:50004470-50004489 | Msa0456430:intron | 25.0% |
| !!! | AGTTTTTTCACCATTACTAT+CGG | - | chr3_3:50004739-50004758 | None:intergenic | 25.0% |
| ! | TAATGGTGAAAAAACTTTCT+CGG | + | chr3_3:50004743-50004762 | Msa0456430:CDS | 25.0% |
| !! | AAATGTTTTCCTTATCGTTT+CGG | + | chr3_3:50004968-50004987 | Msa0456430:three_prime_UTR | 25.0% |
| ! | TCTAAGAATTTGAGAAGAAA+AGG | - | chr3_3:50001230-50001249 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTATGATGTTTT+TGG | + | chr3_3:50001746-50001765 | Msa0456430:intron | 25.0% |
| ! | AGCAAGAAAAATTACTTACA+GGG | - | chr3_3:50002090-50002109 | None:intergenic | 25.0% |
| ! | AGAGGTTAAGCAAATTAAAA+TGG | + | chr3_3:50002226-50002245 | Msa0456430:intron | 25.0% |
| !!! | GTTTCAATGATTAGTTTGTT+TGG | + | chr3_3:50002662-50002681 | Msa0456430:intron | 25.0% |
| !! | ACAATTTGATCATCTTTTTC+AGG | + | chr3_3:50002692-50002711 | Msa0456430:intron | 25.0% |
| !!! | TGCAAAAAAAGCATCATTTT+CGG | - | chr3_3:50002730-50002749 | None:intergenic | 25.0% |
| !!! | AAAATGATGCTTTTTTTGCA+TGG | + | chr3_3:50002730-50002749 | Msa0456430:CDS | 25.0% |
| ! | TTCATCAGAAAATGAATACA+TGG | - | chr3_3:50003027-50003046 | None:intergenic | 25.0% |
| ! | ATATATGTAGTTATGAATGG+AGG | + | chr3_3:50003046-50003065 | Msa0456430:intron | 25.0% |
| ! | TGATAATATACATGGTAGAT+TGG | - | chr3_3:50003105-50003124 | None:intergenic | 25.0% |
| ! | GATATGGATGATAATATACA+TGG | - | chr3_3:50003113-50003132 | None:intergenic | 25.0% |
| ! | TCCATATCAGTTATAATAGA+CGG | + | chr3_3:50003125-50003144 | Msa0456430:intron | 25.0% |
| !! | AATTCAATGCTGTTTAATAG+GGG | - | chr3_3:50003227-50003246 | None:intergenic | 25.0% |
| !! | CAATTCAATGCTGTTTAATA+GGG | - | chr3_3:50003228-50003247 | None:intergenic | 25.0% |
| !! | TCAATTCAATGCTGTTTAAT+AGG | - | chr3_3:50003229-50003248 | None:intergenic | 25.0% |
| ! | CTTCAAAATCTATGGAAAAA+TGG | - | chr3_3:50003256-50003275 | None:intergenic | 25.0% |
| !! | CATTTTTCCATAGATTTTGA+AGG | + | chr3_3:50003254-50003273 | Msa0456430:intron | 25.0% |
| ! | TGTTTAATTGTTTATCCATG+TGG | + | chr3_3:50003357-50003376 | Msa0456430:intron | 25.0% |
| ! | GTTTAATTGTTTATCCATGT+GGG | + | chr3_3:50003358-50003377 | Msa0456430:intron | 25.0% |
| ! | ACACAAATCAGAATAATCTA+GGG | - | chr3_3:50003421-50003440 | None:intergenic | 25.0% |
| ! | ATTAATATTTGTGTTGGAAG+AGG | + | chr3_3:50003547-50003566 | Msa0456430:intron | 25.0% |
| ! | TTAATATTTGTGTTGGAAGA+GGG | + | chr3_3:50003548-50003567 | Msa0456430:intron | 25.0% |
| !! | ATGGATACTGTGTATTTTAT+AGG | - | chr3_3:50003759-50003778 | None:intergenic | 25.0% |
| !!! | GTATTTATTTTGTGTGCTTT+TGG | + | chr3_3:50003786-50003805 | Msa0456430:intron | 25.0% |
| ! | TTCATTATTTCCGTATCTAT+TGG | + | chr3_3:50003966-50003985 | Msa0456430:intron | 25.0% |
| ! | TCCAACAAGAATATATAGAA+CGG | - | chr3_3:50004188-50004207 | None:intergenic | 25.0% |
| ! | TATATATTCTTGTTGGAAAG+CGG | + | chr3_3:50004191-50004210 | Msa0456430:CDS | 25.0% |
| ! | TCAGAGCTTAAATTCTTATT+TGG | + | chr3_3:50004466-50004485 | Msa0456430:intron | 25.0% |
| !! | AGCTTAAATTCTTATTTGGT+TGG | + | chr3_3:50004470-50004489 | Msa0456430:intron | 25.0% |
| !!! | AGTTTTTTCACCATTACTAT+CGG | - | chr3_3:50004739-50004758 | None:intergenic | 25.0% |
| ! | TAATGGTGAAAAAACTTTCT+CGG | + | chr3_3:50004743-50004762 | Msa0456430:CDS | 25.0% |
| !! | AAATGTTTTCCTTATCGTTT+CGG | + | chr3_3:50004968-50004987 | Msa0456430:three_prime_UTR | 25.0% |
| ATGGAAAATTGGGAAAGAAT+TGG | - | chr3_3:50001182-50001201 | None:intergenic | 30.0% | |
| !! | GAAATTGGTGATGGAAAATT+GGG | - | chr3_3:50001192-50001211 | None:intergenic | 30.0% |
| !! | AGAAATTGGTGATGGAAAAT+TGG | - | chr3_3:50001193-50001212 | None:intergenic | 30.0% |
| !! | ATTTGAGAAGAAAAGGCATT+GGG | - | chr3_3:50001223-50001242 | None:intergenic | 30.0% |
| ! | AATTTGAGAAGAAAAGGCAT+TGG | - | chr3_3:50001224-50001243 | None:intergenic | 30.0% |
| ! | TCTTTCAGTATTTTGCTGAT+TGG | + | chr3_3:50001297-50001316 | Msa0456430:intron | 30.0% |
| !!! | ATCCTTTTGCTATTCTAGAT+TGG | + | chr3_3:50001421-50001440 | Msa0456430:intron | 30.0% |
| ! | ATCCAATCTAGAATAGCAAA+AGG | - | chr3_3:50001426-50001445 | None:intergenic | 30.0% |
| ACAAAATGATCATGTGCAAA+GGG | - | chr3_3:50001631-50001650 | None:intergenic | 30.0% | |
| TTTGACATGCAAAAGTTGTT+TGG | + | chr3_3:50001708-50001727 | Msa0456430:intron | 30.0% | |
| TTGACATGCAAAAGTTGTTT+GGG | + | chr3_3:50001709-50001728 | Msa0456430:intron | 30.0% | |
| CAGCAAGAAAAATTACTTAC+AGG | - | chr3_3:50002091-50002110 | None:intergenic | 30.0% | |
| AACATATATGTGTTTGCATG+TGG | + | chr3_3:50002151-50002170 | Msa0456430:intron | 30.0% | |
| !! | GTAGTTATTTCTCTGTTTAG+AGG | + | chr3_3:50002208-50002227 | Msa0456430:intron | 30.0% |
| AAATTTATGGTCACTACCAT+TGG | + | chr3_3:50002266-50002285 | Msa0456430:intron | 30.0% | |
| !!! | CTTTTGGTTTTATCTTGTGT+AGG | + | chr3_3:50002404-50002423 | Msa0456430:intron | 30.0% |
| !!! | AAAAGCATCATTTTCGGAAA+AGG | - | chr3_3:50002724-50002743 | None:intergenic | 30.0% |
| ACCACAACATATAGCAAAAT+TGG | - | chr3_3:50002998-50003017 | None:intergenic | 30.0% | |
| GAGAAAAAAACCTGTACATT+AGG | + | chr3_3:50003068-50003087 | Msa0456430:intron | 30.0% | |
| TTCAAAATCTCCTAATGTAC+AGG | - | chr3_3:50003081-50003100 | None:intergenic | 30.0% | |
| CCATATCAGTTATAATAGAC+GGG | + | chr3_3:50003126-50003145 | Msa0456430:intron | 30.0% | |
| ! | AGTAAACCAATAGACAGTTT+TGG | - | chr3_3:50003182-50003201 | None:intergenic | 30.0% |
| ! | TTAATAGGGGTTTAGAATAC+AGG | - | chr3_3:50003214-50003233 | None:intergenic | 30.0% |
| CAAAATCTATGGAAAAATGG+TGG | - | chr3_3:50003253-50003272 | None:intergenic | 30.0% | |
| TAGATTGCCTTCAAAATCTA+TGG | - | chr3_3:50003264-50003283 | None:intergenic | 30.0% | |
| ! | AGAAATTTTGCACTTAGATG+AGG | + | chr3_3:50003300-50003319 | Msa0456430:intron | 30.0% |
| CACAAATCAGAATAATCTAG+GGG | - | chr3_3:50003420-50003439 | None:intergenic | 30.0% | |
| GACACAAATCAGAATAATCT+AGG | - | chr3_3:50003422-50003441 | None:intergenic | 30.0% | |
| TTTGAAAATGCAAGGTTGTT+TGG | + | chr3_3:50003508-50003527 | Msa0456430:intron | 30.0% | |
| !! | GCATGCATTTTTCAGTAAAA+GGG | - | chr3_3:50003699-50003718 | None:intergenic | 30.0% |
| GCAATCCAAATAATTCAAGA+AGG | - | chr3_3:50003721-50003740 | None:intergenic | 30.0% | |
| ATCCAATATGTGTGTGAAAA+AGG | + | chr3_3:50003901-50003920 | Msa0456430:intron | 30.0% | |
| TTATTTCCGTATCTATTGGT+AGG | + | chr3_3:50003970-50003989 | Msa0456430:intron | 30.0% | |
| !! | AGTCCGAAAGTATCATATAT+GGG | - | chr3_3:50004006-50004025 | None:intergenic | 30.0% |
| !! | ATTTTAAGTACTAGGTACCT+AGG | - | chr3_3:50004065-50004084 | None:intergenic | 30.0% |
| TACTGTTCATATTACTGTTG+AGG | + | chr3_3:50004341-50004360 | Msa0456430:CDS | 30.0% | |
| ACCAAAGCAACAAGTTATAA+CGG | - | chr3_3:50004545-50004564 | None:intergenic | 30.0% | |
| !! | TCATTGATGATGTTCTTGAA+TGG | + | chr3_3:50004598-50004617 | Msa0456430:CDS | 30.0% |
| AGAAGTCATTGAAAACATAG+AGG | + | chr3_3:50004782-50004801 | Msa0456430:CDS | 30.0% | |
| ATTGAAAACATAGAGGATGT+AGG | + | chr3_3:50004789-50004808 | Msa0456430:CDS | 30.0% | |
| ! | CTAGTCACTAGATGTATTTT+AGG | - | chr3_3:50004854-50004873 | None:intergenic | 30.0% |
| ATGGAAAATTGGGAAAGAAT+TGG | - | chr3_3:50001182-50001201 | None:intergenic | 30.0% | |
| !! | GAAATTGGTGATGGAAAATT+GGG | - | chr3_3:50001192-50001211 | None:intergenic | 30.0% |
| !! | AGAAATTGGTGATGGAAAAT+TGG | - | chr3_3:50001193-50001212 | None:intergenic | 30.0% |
| !! | ATTTGAGAAGAAAAGGCATT+GGG | - | chr3_3:50001223-50001242 | None:intergenic | 30.0% |
| ! | AATTTGAGAAGAAAAGGCAT+TGG | - | chr3_3:50001224-50001243 | None:intergenic | 30.0% |
| ! | TCTTTCAGTATTTTGCTGAT+TGG | + | chr3_3:50001297-50001316 | Msa0456430:intron | 30.0% |
| !!! | ATCCTTTTGCTATTCTAGAT+TGG | + | chr3_3:50001421-50001440 | Msa0456430:intron | 30.0% |
| ! | ATCCAATCTAGAATAGCAAA+AGG | - | chr3_3:50001426-50001445 | None:intergenic | 30.0% |
| ACAAAATGATCATGTGCAAA+GGG | - | chr3_3:50001631-50001650 | None:intergenic | 30.0% | |
| TTTGACATGCAAAAGTTGTT+TGG | + | chr3_3:50001708-50001727 | Msa0456430:intron | 30.0% | |
| TTGACATGCAAAAGTTGTTT+GGG | + | chr3_3:50001709-50001728 | Msa0456430:intron | 30.0% | |
| CAGCAAGAAAAATTACTTAC+AGG | - | chr3_3:50002091-50002110 | None:intergenic | 30.0% | |
| AACATATATGTGTTTGCATG+TGG | + | chr3_3:50002151-50002170 | Msa0456430:intron | 30.0% | |
| !! | GTAGTTATTTCTCTGTTTAG+AGG | + | chr3_3:50002208-50002227 | Msa0456430:intron | 30.0% |
| AAATTTATGGTCACTACCAT+TGG | + | chr3_3:50002266-50002285 | Msa0456430:intron | 30.0% | |
| !!! | CTTTTGGTTTTATCTTGTGT+AGG | + | chr3_3:50002404-50002423 | Msa0456430:intron | 30.0% |
| !!! | AAAAGCATCATTTTCGGAAA+AGG | - | chr3_3:50002724-50002743 | None:intergenic | 30.0% |
| ACCACAACATATAGCAAAAT+TGG | - | chr3_3:50002998-50003017 | None:intergenic | 30.0% | |
| GAGAAAAAAACCTGTACATT+AGG | + | chr3_3:50003068-50003087 | Msa0456430:intron | 30.0% | |
| TTCAAAATCTCCTAATGTAC+AGG | - | chr3_3:50003081-50003100 | None:intergenic | 30.0% | |
| CCATATCAGTTATAATAGAC+GGG | + | chr3_3:50003126-50003145 | Msa0456430:intron | 30.0% | |
| ! | AGTAAACCAATAGACAGTTT+TGG | - | chr3_3:50003182-50003201 | None:intergenic | 30.0% |
| ! | TTAATAGGGGTTTAGAATAC+AGG | - | chr3_3:50003214-50003233 | None:intergenic | 30.0% |
| CAAAATCTATGGAAAAATGG+TGG | - | chr3_3:50003253-50003272 | None:intergenic | 30.0% | |
| TAGATTGCCTTCAAAATCTA+TGG | - | chr3_3:50003264-50003283 | None:intergenic | 30.0% | |
| ! | AGAAATTTTGCACTTAGATG+AGG | + | chr3_3:50003300-50003319 | Msa0456430:intron | 30.0% |
| CACAAATCAGAATAATCTAG+GGG | - | chr3_3:50003420-50003439 | None:intergenic | 30.0% | |
| GACACAAATCAGAATAATCT+AGG | - | chr3_3:50003422-50003441 | None:intergenic | 30.0% | |
| TTTGAAAATGCAAGGTTGTT+TGG | + | chr3_3:50003508-50003527 | Msa0456430:intron | 30.0% | |
| !! | GCATGCATTTTTCAGTAAAA+GGG | - | chr3_3:50003699-50003718 | None:intergenic | 30.0% |
| GCAATCCAAATAATTCAAGA+AGG | - | chr3_3:50003721-50003740 | None:intergenic | 30.0% | |
| ATCCAATATGTGTGTGAAAA+AGG | + | chr3_3:50003901-50003920 | Msa0456430:intron | 30.0% | |
| TTATTTCCGTATCTATTGGT+AGG | + | chr3_3:50003970-50003989 | Msa0456430:intron | 30.0% | |
| !! | AGTCCGAAAGTATCATATAT+GGG | - | chr3_3:50004006-50004025 | None:intergenic | 30.0% |
| !! | ATTTTAAGTACTAGGTACCT+AGG | - | chr3_3:50004065-50004084 | None:intergenic | 30.0% |
| TACTGTTCATATTACTGTTG+AGG | + | chr3_3:50004341-50004360 | Msa0456430:CDS | 30.0% | |
| ACCAAAGCAACAAGTTATAA+CGG | - | chr3_3:50004545-50004564 | None:intergenic | 30.0% | |
| !! | TCATTGATGATGTTCTTGAA+TGG | + | chr3_3:50004598-50004617 | Msa0456430:CDS | 30.0% |
| AGAAGTCATTGAAAACATAG+AGG | + | chr3_3:50004782-50004801 | Msa0456430:CDS | 30.0% | |
| ATTGAAAACATAGAGGATGT+AGG | + | chr3_3:50004789-50004808 | Msa0456430:CDS | 30.0% | |
| ! | CTAGTCACTAGATGTATTTT+AGG | - | chr3_3:50004854-50004873 | None:intergenic | 30.0% |
| AAAATGAAGAAATCATCGGG+AGG | + | chr3_3:50001048-50001067 | Msa0456430:exon | 35.0% | |
| CAAAATGATCATGTGCAAAG+GGG | - | chr3_3:50001630-50001649 | None:intergenic | 35.0% | |
| CACAAAATGATCATGTGCAA+AGG | - | chr3_3:50001632-50001651 | None:intergenic | 35.0% | |
| GAGCTTCTTGAAAAATCATC+CGG | + | chr3_3:50001904-50001923 | Msa0456430:CDS | 35.0% | |
| !! | GGTTAAAGACATTCTGGAAT+CGG | + | chr3_3:50001928-50001947 | Msa0456430:CDS | 35.0% |
| GGAAGAAAAAGCTTTCTACT+TGG | + | chr3_3:50002044-50002063 | Msa0456430:CDS | 35.0% | |
| GGGAAAATTTCTAAATGAGC+AGG | - | chr3_3:50002070-50002089 | None:intergenic | 35.0% | |
| GGAATAACATCAAAGACCAA+TGG | - | chr3_3:50002285-50002304 | None:intergenic | 35.0% | |
| GGTCCAATGAACAACATTAT+TGG | + | chr3_3:50002353-50002372 | Msa0456430:intron | 35.0% | |
| TGGCCAATAATGTTGTTCAT+TGG | - | chr3_3:50002359-50002378 | None:intergenic | 35.0% | |
| CACATAGATATCACAGAAGT+AGG | - | chr3_3:50002484-50002503 | None:intergenic | 35.0% | |
| TTGTAAAACGACATCCACTT+TGG | + | chr3_3:50002757-50002776 | Msa0456430:CDS | 35.0% | |
| !!! | AGACACTCCTATCTTTTTTC+TGG | + | chr3_3:50002781-50002800 | Msa0456430:CDS | 35.0% |
| CAAATAGCCAATGTTAACAC+AGG | - | chr3_3:50002807-50002826 | None:intergenic | 35.0% | |
| TTAATACTTTACTCGTGTGC+TGG | + | chr3_3:50002861-50002880 | Msa0456430:CDS | 35.0% | |
| TAATACTTTACTCGTGTGCT+GGG | + | chr3_3:50002862-50002881 | Msa0456430:CDS | 35.0% | |
| AACATTTGTAACAGCCCATA+AGG | - | chr3_3:50002964-50002983 | None:intergenic | 35.0% | |
| !! | GCCAATTTTGCTATATGTTG+TGG | + | chr3_3:50002994-50003013 | Msa0456430:intron | 35.0% |
| CCCGTCTATTATAACTGATA+TGG | - | chr3_3:50003129-50003148 | None:intergenic | 35.0% | |
| ATAGGACCAAAACTGTCTAT+TGG | + | chr3_3:50003173-50003192 | Msa0456430:intron | 35.0% | |
| TATTAGTATACTCTCCCACA+TGG | - | chr3_3:50003375-50003394 | None:intergenic | 35.0% | |
| !!! | GTGTTTCTGGTAGTTTTCTA+GGG | + | chr3_3:50003474-50003493 | Msa0456430:intron | 35.0% |
| !!! | TGTTTCTGGTAGTTTTCTAG+GGG | + | chr3_3:50003475-50003494 | Msa0456430:intron | 35.0% |
| !!! | TGCATGGTTTTGAAAATGCA+AGG | + | chr3_3:50003500-50003519 | Msa0456430:intron | 35.0% |
| !! | GGCATGCATTTTTCAGTAAA+AGG | - | chr3_3:50003700-50003719 | None:intergenic | 35.0% |
| GCATGCCTTCTTGAATTATT+TGG | + | chr3_3:50003713-50003732 | Msa0456430:intron | 35.0% | |
| TTGGGTTTATTCATGCTTGA+TGG | + | chr3_3:50003805-50003824 | Msa0456430:intron | 35.0% | |
| !! | AGCCTTTTTCACACACATAT+TGG | - | chr3_3:50003906-50003925 | None:intergenic | 35.0% |
| TGGCCCATATATGATACTTT+CGG | + | chr3_3:50004000-50004019 | Msa0456430:intron | 35.0% | |
| !! | GAGTCCGAAAGTATCATATA+TGG | - | chr3_3:50004007-50004026 | None:intergenic | 35.0% |
| ! | GATAAATGCACCCTTTTCTT+CGG | + | chr3_3:50004116-50004135 | Msa0456430:intron | 35.0% |
| GCCGTTCTATATATTCTTGT+TGG | + | chr3_3:50004184-50004203 | Msa0456430:CDS | 35.0% | |
| CTTTCCTCTTCATCTTTCTT+TGG | - | chr3_3:50004280-50004299 | None:intergenic | 35.0% | |
| CAAAGAAAGATGAAGAGGAA+AGG | + | chr3_3:50004278-50004297 | Msa0456430:CDS | 35.0% | |
| AAAATCCTTGTCGTCCATTT+CGG | - | chr3_3:50004304-50004323 | None:intergenic | 35.0% | |
| ! | CAAATTGTTTTCCCTTCATG+GGG | - | chr3_3:50004506-50004525 | None:intergenic | 35.0% |
| ! | GCAAATTGTTTTCCCTTCAT+GGG | - | chr3_3:50004507-50004526 | None:intergenic | 35.0% |
| ! | TGCAAATTGTTTTCCCTTCA+TGG | - | chr3_3:50004508-50004527 | None:intergenic | 35.0% |
| ! | TTTTCACCATTACTATCGGT+TGG | - | chr3_3:50004735-50004754 | None:intergenic | 35.0% |
| AAAATGAAGAAATCATCGGG+AGG | + | chr3_3:50001048-50001067 | Msa0456430:exon | 35.0% | |
| CAAAATGATCATGTGCAAAG+GGG | - | chr3_3:50001630-50001649 | None:intergenic | 35.0% | |
| CACAAAATGATCATGTGCAA+AGG | - | chr3_3:50001632-50001651 | None:intergenic | 35.0% | |
| GAGCTTCTTGAAAAATCATC+CGG | + | chr3_3:50001904-50001923 | Msa0456430:CDS | 35.0% | |
| !! | GGTTAAAGACATTCTGGAAT+CGG | + | chr3_3:50001928-50001947 | Msa0456430:CDS | 35.0% |
| GGAAGAAAAAGCTTTCTACT+TGG | + | chr3_3:50002044-50002063 | Msa0456430:CDS | 35.0% | |
| GGGAAAATTTCTAAATGAGC+AGG | - | chr3_3:50002070-50002089 | None:intergenic | 35.0% | |
| GGAATAACATCAAAGACCAA+TGG | - | chr3_3:50002285-50002304 | None:intergenic | 35.0% | |
| GGTCCAATGAACAACATTAT+TGG | + | chr3_3:50002353-50002372 | Msa0456430:intron | 35.0% | |
| TGGCCAATAATGTTGTTCAT+TGG | - | chr3_3:50002359-50002378 | None:intergenic | 35.0% | |
| CACATAGATATCACAGAAGT+AGG | - | chr3_3:50002484-50002503 | None:intergenic | 35.0% | |
| TTGTAAAACGACATCCACTT+TGG | + | chr3_3:50002757-50002776 | Msa0456430:CDS | 35.0% | |
| !!! | AGACACTCCTATCTTTTTTC+TGG | + | chr3_3:50002781-50002800 | Msa0456430:CDS | 35.0% |
| CAAATAGCCAATGTTAACAC+AGG | - | chr3_3:50002807-50002826 | None:intergenic | 35.0% | |
| TTAATACTTTACTCGTGTGC+TGG | + | chr3_3:50002861-50002880 | Msa0456430:CDS | 35.0% | |
| TAATACTTTACTCGTGTGCT+GGG | + | chr3_3:50002862-50002881 | Msa0456430:CDS | 35.0% | |
| AACATTTGTAACAGCCCATA+AGG | - | chr3_3:50002964-50002983 | None:intergenic | 35.0% | |
| !! | GCCAATTTTGCTATATGTTG+TGG | + | chr3_3:50002994-50003013 | Msa0456430:intron | 35.0% |
| CCCGTCTATTATAACTGATA+TGG | - | chr3_3:50003129-50003148 | None:intergenic | 35.0% | |
| ATAGGACCAAAACTGTCTAT+TGG | + | chr3_3:50003173-50003192 | Msa0456430:intron | 35.0% | |
| TATTAGTATACTCTCCCACA+TGG | - | chr3_3:50003375-50003394 | None:intergenic | 35.0% | |
| !!! | GTGTTTCTGGTAGTTTTCTA+GGG | + | chr3_3:50003474-50003493 | Msa0456430:intron | 35.0% |
| !!! | TGTTTCTGGTAGTTTTCTAG+GGG | + | chr3_3:50003475-50003494 | Msa0456430:intron | 35.0% |
| !!! | TGCATGGTTTTGAAAATGCA+AGG | + | chr3_3:50003500-50003519 | Msa0456430:intron | 35.0% |
| !! | GGCATGCATTTTTCAGTAAA+AGG | - | chr3_3:50003700-50003719 | None:intergenic | 35.0% |
| GCATGCCTTCTTGAATTATT+TGG | + | chr3_3:50003713-50003732 | Msa0456430:intron | 35.0% | |
| TTGGGTTTATTCATGCTTGA+TGG | + | chr3_3:50003805-50003824 | Msa0456430:intron | 35.0% | |
| !! | AGCCTTTTTCACACACATAT+TGG | - | chr3_3:50003906-50003925 | None:intergenic | 35.0% |
| TGGCCCATATATGATACTTT+CGG | + | chr3_3:50004000-50004019 | Msa0456430:intron | 35.0% | |
| !! | GAGTCCGAAAGTATCATATA+TGG | - | chr3_3:50004007-50004026 | None:intergenic | 35.0% |
| ! | GATAAATGCACCCTTTTCTT+CGG | + | chr3_3:50004116-50004135 | Msa0456430:intron | 35.0% |
| GCCGTTCTATATATTCTTGT+TGG | + | chr3_3:50004184-50004203 | Msa0456430:CDS | 35.0% | |
| CTTTCCTCTTCATCTTTCTT+TGG | - | chr3_3:50004280-50004299 | None:intergenic | 35.0% | |
| CAAAGAAAGATGAAGAGGAA+AGG | + | chr3_3:50004278-50004297 | Msa0456430:CDS | 35.0% | |
| AAAATCCTTGTCGTCCATTT+CGG | - | chr3_3:50004304-50004323 | None:intergenic | 35.0% | |
| ! | CAAATTGTTTTCCCTTCATG+GGG | - | chr3_3:50004506-50004525 | None:intergenic | 35.0% |
| ! | GCAAATTGTTTTCCCTTCAT+GGG | - | chr3_3:50004507-50004526 | None:intergenic | 35.0% |
| ! | TGCAAATTGTTTTCCCTTCA+TGG | - | chr3_3:50004508-50004527 | None:intergenic | 35.0% |
| ! | TTTTCACCATTACTATCGGT+TGG | - | chr3_3:50004735-50004754 | None:intergenic | 35.0% |
| ! | AGAGAGAGAGAGCATAACAT+AGG | + | chr3_3:50001015-50001034 | Msa0456430:five_prime_UTR | 40.0% |
| AAACCCTAGAGAGAGAAAGA+GGG | - | chr3_3:50001159-50001178 | None:intergenic | 40.0% | |
| CATGTGCAAAGGGGATATAA+AGG | - | chr3_3:50001621-50001640 | None:intergenic | 40.0% | |
| TCAGAAACAAGCTGTGAAGA+AGG | + | chr3_3:50001772-50001791 | Msa0456430:intron | 40.0% | |
| TGTGAAGAAGGATGTGTATC+AGG | + | chr3_3:50001784-50001803 | Msa0456430:CDS | 40.0% | |
| TGAGAAAGTGAGAGACCATA+AGG | + | chr3_3:50001814-50001833 | Msa0456430:CDS | 40.0% | |
| ATCTCGAAACCAACTCCTTA+TGG | - | chr3_3:50001832-50001851 | None:intergenic | 40.0% | |
| ! | ATAAGGAGTTGGTTTCGAGA+TGG | + | chr3_3:50001831-50001850 | Msa0456430:CDS | 40.0% |
| ! | TAAGGAGTTGGTTTCGAGAT+GGG | + | chr3_3:50001832-50001851 | Msa0456430:CDS | 40.0% |
| !! | ACACGTGTCGAGTATTTTAG+AGG | + | chr3_3:50001869-50001888 | Msa0456430:CDS | 40.0% |
| !! | CACGTGTCGAGTATTTTAGA+GGG | + | chr3_3:50001870-50001889 | Msa0456430:CDS | 40.0% |
| !! | TGTCGAGTATTTTAGAGGGA+AGG | + | chr3_3:50001874-50001893 | Msa0456430:CDS | 40.0% |
| CTTCTTGAAAAATCATCCGG+AGG | + | chr3_3:50001907-50001926 | Msa0456430:CDS | 40.0% | |
| TCCAGAATGTCTTTAACCTC+CGG | - | chr3_3:50001926-50001945 | None:intergenic | 40.0% | |
| TGGTAAAAACTCTTCGTCCT+GGG | + | chr3_3:50002023-50002042 | Msa0456430:CDS | 40.0% | |
| !! | GTAGAAAGCTTTTTCTTCCC+AGG | - | chr3_3:50002043-50002062 | None:intergenic | 40.0% |
| ATGTTGTTCATTGGACCAAC+AGG | - | chr3_3:50002350-50002369 | None:intergenic | 40.0% | |
| !!! | ATTGGCCACTTTTTTGTGTG+TGG | + | chr3_3:50002371-50002390 | Msa0456430:intron | 40.0% |
| ACACAGGCCAGAAAAAAGAT+AGG | - | chr3_3:50002791-50002810 | None:intergenic | 40.0% | |
| ! | TTTCTGGCCTGTGTTAACAT+TGG | + | chr3_3:50002797-50002816 | Msa0456430:CDS | 40.0% |
| TTAAGAGCTTGCAGCTATGA+GGG | - | chr3_3:50002845-50002864 | None:intergenic | 40.0% | |
| ATTAAGAGCTTGCAGCTATG+AGG | - | chr3_3:50002846-50002865 | None:intergenic | 40.0% | |
| GTAGAGAGAGGATGAGAAAA+AGG | - | chr3_3:50002890-50002909 | None:intergenic | 40.0% | |
| ACTTACTCAACAGTAGAGAG+AGG | - | chr3_3:50002902-50002921 | None:intergenic | 40.0% | |
| TTTGCACTTAGATGAGGAAG+AGG | + | chr3_3:50003306-50003325 | Msa0456430:intron | 40.0% | |
| !!! | GGTGTTTCTGGTAGTTTTCT+AGG | + | chr3_3:50003473-50003492 | Msa0456430:intron | 40.0% |
| !! | TAGTTTTCTAGGGGTTTGCA+TGG | + | chr3_3:50003484-50003503 | Msa0456430:intron | 40.0% |
| ! | TGCTAGCCTACCAATAGATA+CGG | - | chr3_3:50003979-50003998 | None:intergenic | 40.0% |
| ATCTATTGGTAGGCTAGCAT+TGG | + | chr3_3:50003980-50003999 | Msa0456430:intron | 40.0% | |
| ! | TGCGAGAGTTGTTCAGATTT+TGG | + | chr3_3:50004254-50004273 | Msa0456430:CDS | 40.0% |
| TTGGCCAAAGAAAGATGAAG+AGG | + | chr3_3:50004273-50004292 | Msa0456430:CDS | 40.0% | |
| ! | GACAAGGATTTTCTATGCTG+TGG | + | chr3_3:50004312-50004331 | Msa0456430:CDS | 40.0% |
| ! | AAGGATTTTCTATGCTGTGG+TGG | + | chr3_3:50004315-50004334 | Msa0456430:CDS | 40.0% |
| !! | GCCGTTATAACTTGTTGCTT+TGG | + | chr3_3:50004541-50004560 | Msa0456430:intron | 40.0% |
| AGAATGTGACTAATGCCACA+GGG | + | chr3_3:50004658-50004677 | Msa0456430:CDS | 40.0% | |
| ! | AGAGAGAGAGAGCATAACAT+AGG | + | chr3_3:50001015-50001034 | Msa0456430:five_prime_UTR | 40.0% |
| AAACCCTAGAGAGAGAAAGA+GGG | - | chr3_3:50001159-50001178 | None:intergenic | 40.0% | |
| CATGTGCAAAGGGGATATAA+AGG | - | chr3_3:50001621-50001640 | None:intergenic | 40.0% | |
| TCAGAAACAAGCTGTGAAGA+AGG | + | chr3_3:50001772-50001791 | Msa0456430:intron | 40.0% | |
| TGTGAAGAAGGATGTGTATC+AGG | + | chr3_3:50001784-50001803 | Msa0456430:CDS | 40.0% | |
| TGAGAAAGTGAGAGACCATA+AGG | + | chr3_3:50001814-50001833 | Msa0456430:CDS | 40.0% | |
| ATCTCGAAACCAACTCCTTA+TGG | - | chr3_3:50001832-50001851 | None:intergenic | 40.0% | |
| ! | ATAAGGAGTTGGTTTCGAGA+TGG | + | chr3_3:50001831-50001850 | Msa0456430:CDS | 40.0% |
| ! | TAAGGAGTTGGTTTCGAGAT+GGG | + | chr3_3:50001832-50001851 | Msa0456430:CDS | 40.0% |
| !! | ACACGTGTCGAGTATTTTAG+AGG | + | chr3_3:50001869-50001888 | Msa0456430:CDS | 40.0% |
| !! | CACGTGTCGAGTATTTTAGA+GGG | + | chr3_3:50001870-50001889 | Msa0456430:CDS | 40.0% |
| !! | TGTCGAGTATTTTAGAGGGA+AGG | + | chr3_3:50001874-50001893 | Msa0456430:CDS | 40.0% |
| CTTCTTGAAAAATCATCCGG+AGG | + | chr3_3:50001907-50001926 | Msa0456430:CDS | 40.0% | |
| TCCAGAATGTCTTTAACCTC+CGG | - | chr3_3:50001926-50001945 | None:intergenic | 40.0% | |
| TGGTAAAAACTCTTCGTCCT+GGG | + | chr3_3:50002023-50002042 | Msa0456430:CDS | 40.0% | |
| !! | GTAGAAAGCTTTTTCTTCCC+AGG | - | chr3_3:50002043-50002062 | None:intergenic | 40.0% |
| ATGTTGTTCATTGGACCAAC+AGG | - | chr3_3:50002350-50002369 | None:intergenic | 40.0% | |
| !!! | ATTGGCCACTTTTTTGTGTG+TGG | + | chr3_3:50002371-50002390 | Msa0456430:intron | 40.0% |
| ACACAGGCCAGAAAAAAGAT+AGG | - | chr3_3:50002791-50002810 | None:intergenic | 40.0% | |
| ! | TTTCTGGCCTGTGTTAACAT+TGG | + | chr3_3:50002797-50002816 | Msa0456430:CDS | 40.0% |
| TTAAGAGCTTGCAGCTATGA+GGG | - | chr3_3:50002845-50002864 | None:intergenic | 40.0% | |
| ATTAAGAGCTTGCAGCTATG+AGG | - | chr3_3:50002846-50002865 | None:intergenic | 40.0% | |
| GTAGAGAGAGGATGAGAAAA+AGG | - | chr3_3:50002890-50002909 | None:intergenic | 40.0% | |
| ACTTACTCAACAGTAGAGAG+AGG | - | chr3_3:50002902-50002921 | None:intergenic | 40.0% | |
| TTTGCACTTAGATGAGGAAG+AGG | + | chr3_3:50003306-50003325 | Msa0456430:intron | 40.0% | |
| !!! | GGTGTTTCTGGTAGTTTTCT+AGG | + | chr3_3:50003473-50003492 | Msa0456430:intron | 40.0% |
| !! | TAGTTTTCTAGGGGTTTGCA+TGG | + | chr3_3:50003484-50003503 | Msa0456430:intron | 40.0% |
| ! | TGCTAGCCTACCAATAGATA+CGG | - | chr3_3:50003979-50003998 | None:intergenic | 40.0% |
| ATCTATTGGTAGGCTAGCAT+TGG | + | chr3_3:50003980-50003999 | Msa0456430:intron | 40.0% | |
| ! | TGCGAGAGTTGTTCAGATTT+TGG | + | chr3_3:50004254-50004273 | Msa0456430:CDS | 40.0% |
| TTGGCCAAAGAAAGATGAAG+AGG | + | chr3_3:50004273-50004292 | Msa0456430:CDS | 40.0% | |
| ! | GACAAGGATTTTCTATGCTG+TGG | + | chr3_3:50004312-50004331 | Msa0456430:CDS | 40.0% |
| ! | AAGGATTTTCTATGCTGTGG+TGG | + | chr3_3:50004315-50004334 | Msa0456430:CDS | 40.0% |
| !! | GCCGTTATAACTTGTTGCTT+TGG | + | chr3_3:50004541-50004560 | Msa0456430:intron | 40.0% |
| AGAATGTGACTAATGCCACA+GGG | + | chr3_3:50004658-50004677 | Msa0456430:CDS | 40.0% | |
| TCTCCCTCTTTCTCTCTCTA+GGG | + | chr3_3:50001153-50001172 | Msa0456430:intron | 45.0% | |
| GAAACCCTAGAGAGAGAAAG+AGG | - | chr3_3:50001160-50001179 | None:intergenic | 45.0% | |
| GTGGGTGTAGAAATTGGTGA+TGG | - | chr3_3:50001201-50001220 | None:intergenic | 45.0% | |
| CATTGGGTGGGTGTAGAAAT+TGG | - | chr3_3:50001207-50001226 | None:intergenic | 45.0% | |
| !! | GAGAAGAAAAGGCATTGGGT+GGG | - | chr3_3:50001219-50001238 | None:intergenic | 45.0% |
| !! | TGAGAAGAAAAGGCATTGGG+TGG | - | chr3_3:50001220-50001239 | None:intergenic | 45.0% |
| AGTGAGAGACCATAAGGAGT+TGG | + | chr3_3:50001820-50001839 | Msa0456430:CDS | 45.0% | |
| !!! | TTCGAGATGGGCTGTTTTAC+AGG | + | chr3_3:50001844-50001863 | Msa0456430:CDS | 45.0% |
| TCCGGAGGTTAAAGACATTC+TGG | + | chr3_3:50001922-50001941 | Msa0456430:CDS | 45.0% | |
| !! | AAGACATTCTGGAATCGGAC+AGG | + | chr3_3:50001933-50001952 | Msa0456430:CDS | 45.0% |
| GGACAGGAGTTTAGAAACAG+AGG | + | chr3_3:50001949-50001968 | Msa0456430:CDS | 45.0% | |
| ! | TTTAGTTCGCTGTGATCGTG+TGG | + | chr3_3:50002003-50002022 | Msa0456430:CDS | 45.0% |
| GTGGTAAAAACTCTTCGTCC+TGG | + | chr3_3:50002022-50002041 | Msa0456430:CDS | 45.0% | |
| TGTTATTCCTCTGCCTGACA+TGG | + | chr3_3:50002296-50002315 | Msa0456430:intron | 45.0% | |
| GTTATTCCTCTGCCTGACAT+GGG | + | chr3_3:50002297-50002316 | Msa0456430:intron | 45.0% | |
| GGTGAGAAAGAATGACCTGT+TGG | + | chr3_3:50002332-50002351 | Msa0456430:intron | 45.0% | |
| !! | GTGTGGCCGTCTTATTCTTT+TGG | + | chr3_3:50002388-50002407 | Msa0456430:intron | 45.0% |
| ! | AGGGGTTTAGAATACAGGTG+TGG | - | chr3_3:50003209-50003228 | None:intergenic | 45.0% |
| TCTAGGGGAATCATGAAGAC+AGG | - | chr3_3:50003405-50003424 | None:intergenic | 45.0% | |
| AACCATCTCCAGTTCATGGA+AGG | - | chr3_3:50003448-50003467 | None:intergenic | 45.0% | |
| GCATAACCATCTCCAGTTCA+TGG | - | chr3_3:50003452-50003471 | None:intergenic | 45.0% | |
| TGAACTGGAGATGGTTATGC+TGG | + | chr3_3:50003452-50003471 | Msa0456430:intron | 45.0% | |
| GATGGTTATGCTGGTGTTTC+TGG | + | chr3_3:50003461-50003480 | Msa0456430:intron | 45.0% | |
| !!! | TTTTAACTTCATGCGCGCCT+AGG | + | chr3_3:50004045-50004064 | Msa0456430:intron | 45.0% |
| ATCCATGAGGCCGAAGAAAA+GGG | - | chr3_3:50004129-50004148 | None:intergenic | 45.0% | |
| TATCCATGAGGCCGAAGAAA+AGG | - | chr3_3:50004130-50004149 | None:intergenic | 45.0% | |
| TTCTTGTTGGAAAGCGGATC+TGG | + | chr3_3:50004197-50004216 | Msa0456430:CDS | 45.0% | |
| ! | GTTTTTCCCCAACATCCTTG+CGG | + | chr3_3:50004219-50004238 | Msa0456430:CDS | 45.0% |
| ATGAAGAGGAAAGGCCGAAA+TGG | + | chr3_3:50004287-50004306 | Msa0456430:CDS | 45.0% | |
| !! | TGTTGCTTTGGTCTTTGTGC+AGG | + | chr3_3:50004553-50004572 | Msa0456430:intron | 45.0% |
| !! | TCTCCTAGTTTAGCCTTGTC+TGG | + | chr3_3:50004621-50004640 | Msa0456430:CDS | 45.0% |
| !! | CTCCTAGTTTAGCCTTGTCT+GGG | + | chr3_3:50004622-50004641 | Msa0456430:CDS | 45.0% |
| ATCCCAGACAAGGCTAAACT+AGG | - | chr3_3:50004627-50004646 | None:intergenic | 45.0% | |
| !! | TTTAGCCTTGTCTGGGATGA+TGG | + | chr3_3:50004629-50004648 | Msa0456430:CDS | 45.0% |
| TTTGTCCATCATCCCAGACA+AGG | - | chr3_3:50004637-50004656 | None:intergenic | 45.0% | |
| CAGAATGTGACTAATGCCAC+AGG | + | chr3_3:50004657-50004676 | Msa0456430:CDS | 45.0% | |
| GAAGCTCCAACCGATAGTAA+TGG | + | chr3_3:50004726-50004745 | Msa0456430:CDS | 45.0% | |
| TCTCCCTCTTTCTCTCTCTA+GGG | + | chr3_3:50001153-50001172 | Msa0456430:intron | 45.0% | |
| GAAACCCTAGAGAGAGAAAG+AGG | - | chr3_3:50001160-50001179 | None:intergenic | 45.0% | |
| GTGGGTGTAGAAATTGGTGA+TGG | - | chr3_3:50001201-50001220 | None:intergenic | 45.0% | |
| CATTGGGTGGGTGTAGAAAT+TGG | - | chr3_3:50001207-50001226 | None:intergenic | 45.0% | |
| !! | GAGAAGAAAAGGCATTGGGT+GGG | - | chr3_3:50001219-50001238 | None:intergenic | 45.0% |
| !! | TGAGAAGAAAAGGCATTGGG+TGG | - | chr3_3:50001220-50001239 | None:intergenic | 45.0% |
| AGTGAGAGACCATAAGGAGT+TGG | + | chr3_3:50001820-50001839 | Msa0456430:CDS | 45.0% | |
| !!! | TTCGAGATGGGCTGTTTTAC+AGG | + | chr3_3:50001844-50001863 | Msa0456430:CDS | 45.0% |
| TCCGGAGGTTAAAGACATTC+TGG | + | chr3_3:50001922-50001941 | Msa0456430:CDS | 45.0% | |
| !! | AAGACATTCTGGAATCGGAC+AGG | + | chr3_3:50001933-50001952 | Msa0456430:CDS | 45.0% |
| GGACAGGAGTTTAGAAACAG+AGG | + | chr3_3:50001949-50001968 | Msa0456430:CDS | 45.0% | |
| ! | TTTAGTTCGCTGTGATCGTG+TGG | + | chr3_3:50002003-50002022 | Msa0456430:CDS | 45.0% |
| GTGGTAAAAACTCTTCGTCC+TGG | + | chr3_3:50002022-50002041 | Msa0456430:CDS | 45.0% | |
| TGTTATTCCTCTGCCTGACA+TGG | + | chr3_3:50002296-50002315 | Msa0456430:intron | 45.0% | |
| GTTATTCCTCTGCCTGACAT+GGG | + | chr3_3:50002297-50002316 | Msa0456430:intron | 45.0% | |
| GGTGAGAAAGAATGACCTGT+TGG | + | chr3_3:50002332-50002351 | Msa0456430:intron | 45.0% | |
| !! | GTGTGGCCGTCTTATTCTTT+TGG | + | chr3_3:50002388-50002407 | Msa0456430:intron | 45.0% |
| ! | AGGGGTTTAGAATACAGGTG+TGG | - | chr3_3:50003209-50003228 | None:intergenic | 45.0% |
| TCTAGGGGAATCATGAAGAC+AGG | - | chr3_3:50003405-50003424 | None:intergenic | 45.0% | |
| AACCATCTCCAGTTCATGGA+AGG | - | chr3_3:50003448-50003467 | None:intergenic | 45.0% | |
| GCATAACCATCTCCAGTTCA+TGG | - | chr3_3:50003452-50003471 | None:intergenic | 45.0% | |
| TGAACTGGAGATGGTTATGC+TGG | + | chr3_3:50003452-50003471 | Msa0456430:intron | 45.0% | |
| GATGGTTATGCTGGTGTTTC+TGG | + | chr3_3:50003461-50003480 | Msa0456430:intron | 45.0% | |
| !!! | TTTTAACTTCATGCGCGCCT+AGG | + | chr3_3:50004045-50004064 | Msa0456430:intron | 45.0% |
| ATCCATGAGGCCGAAGAAAA+GGG | - | chr3_3:50004129-50004148 | None:intergenic | 45.0% | |
| TATCCATGAGGCCGAAGAAA+AGG | - | chr3_3:50004130-50004149 | None:intergenic | 45.0% | |
| TTCTTGTTGGAAAGCGGATC+TGG | + | chr3_3:50004197-50004216 | Msa0456430:CDS | 45.0% | |
| ! | GTTTTTCCCCAACATCCTTG+CGG | + | chr3_3:50004219-50004238 | Msa0456430:CDS | 45.0% |
| ATGAAGAGGAAAGGCCGAAA+TGG | + | chr3_3:50004287-50004306 | Msa0456430:CDS | 45.0% | |
| !! | TGTTGCTTTGGTCTTTGTGC+AGG | + | chr3_3:50004553-50004572 | Msa0456430:intron | 45.0% |
| !! | TCTCCTAGTTTAGCCTTGTC+TGG | + | chr3_3:50004621-50004640 | Msa0456430:CDS | 45.0% |
| !! | CTCCTAGTTTAGCCTTGTCT+GGG | + | chr3_3:50004622-50004641 | Msa0456430:CDS | 45.0% |
| ATCCCAGACAAGGCTAAACT+AGG | - | chr3_3:50004627-50004646 | None:intergenic | 45.0% | |
| !! | TTTAGCCTTGTCTGGGATGA+TGG | + | chr3_3:50004629-50004648 | Msa0456430:CDS | 45.0% |
| TTTGTCCATCATCCCAGACA+AGG | - | chr3_3:50004637-50004656 | None:intergenic | 45.0% | |
| CAGAATGTGACTAATGCCAC+AGG | + | chr3_3:50004657-50004676 | Msa0456430:CDS | 45.0% | |
| GAAGCTCCAACCGATAGTAA+TGG | + | chr3_3:50004726-50004745 | Msa0456430:CDS | 45.0% | |
| GAGAGAGAGAAACCCTAGGA+GGG | - | chr3_3:50001131-50001150 | None:intergenic | 50.0% | |
| AGAGAGAGAGAAACCCTAGG+AGG | - | chr3_3:50001132-50001151 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAAACCCT+AGG | - | chr3_3:50001135-50001154 | None:intergenic | 50.0% | |
| CTCTCCCTCTTTCTCTCTCT+AGG | + | chr3_3:50001152-50001171 | Msa0456430:intron | 50.0% | |
| CAGGTCATTCTTTCTCACCG+TGG | - | chr3_3:50002331-50002350 | None:intergenic | 50.0% | |
| GACGGCCACACACAAAAAAG+TGG | - | chr3_3:50002379-50002398 | None:intergenic | 50.0% | |
| !! | GATAGGAGTGTCTGCCAAAG+TGG | - | chr3_3:50002774-50002793 | None:intergenic | 50.0% |
| ! | TTGCAGCTATGAGGGTACAC+GGG | - | chr3_3:50002837-50002856 | None:intergenic | 50.0% |
| ! | CTTGCAGCTATGAGGGTACA+CGG | - | chr3_3:50002838-50002857 | None:intergenic | 50.0% |
| GTGTCAGACCTTCCATGAAC+TGG | + | chr3_3:50003437-50003456 | Msa0456430:intron | 50.0% | |
| GACCTTCCATGAACTGGAGA+TGG | + | chr3_3:50003443-50003462 | Msa0456430:intron | 50.0% | |
| AAAGGCCGAAATGGACGACA+AGG | + | chr3_3:50004296-50004315 | Msa0456430:CDS | 50.0% | |
| ATGCACCTGATGAAGCTGCA+AGG | + | chr3_3:50004368-50004387 | Msa0456430:CDS | 50.0% | |
| TGCACCTGATGAAGCTGCAA+GGG | + | chr3_3:50004369-50004388 | Msa0456430:CDS | 50.0% | |
| GATCTACGACACCCCATGAA+GGG | + | chr3_3:50004492-50004511 | Msa0456430:intron | 50.0% | |
| TCCTTATCGTTTCGGCTGTC+AGG | + | chr3_3:50004976-50004995 | Msa0456430:three_prime_UTR | 50.0% | |
| GAGAGAGAGAAACCCTAGGA+GGG | - | chr3_3:50001131-50001150 | None:intergenic | 50.0% | |
| AGAGAGAGAGAAACCCTAGG+AGG | - | chr3_3:50001132-50001151 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAAACCCT+AGG | - | chr3_3:50001135-50001154 | None:intergenic | 50.0% | |
| CTCTCCCTCTTTCTCTCTCT+AGG | + | chr3_3:50001152-50001171 | Msa0456430:intron | 50.0% | |
| CAGGTCATTCTTTCTCACCG+TGG | - | chr3_3:50002331-50002350 | None:intergenic | 50.0% | |
| GACGGCCACACACAAAAAAG+TGG | - | chr3_3:50002379-50002398 | None:intergenic | 50.0% | |
| !! | GATAGGAGTGTCTGCCAAAG+TGG | - | chr3_3:50002774-50002793 | None:intergenic | 50.0% |
| ! | TTGCAGCTATGAGGGTACAC+GGG | - | chr3_3:50002837-50002856 | None:intergenic | 50.0% |
| ! | CTTGCAGCTATGAGGGTACA+CGG | - | chr3_3:50002838-50002857 | None:intergenic | 50.0% |
| GTGTCAGACCTTCCATGAAC+TGG | + | chr3_3:50003437-50003456 | Msa0456430:intron | 50.0% | |
| GACCTTCCATGAACTGGAGA+TGG | + | chr3_3:50003443-50003462 | Msa0456430:intron | 50.0% | |
| AAAGGCCGAAATGGACGACA+AGG | + | chr3_3:50004296-50004315 | Msa0456430:CDS | 50.0% | |
| ATGCACCTGATGAAGCTGCA+AGG | + | chr3_3:50004368-50004387 | Msa0456430:CDS | 50.0% | |
| TGCACCTGATGAAGCTGCAA+GGG | + | chr3_3:50004369-50004388 | Msa0456430:CDS | 50.0% | |
| GATCTACGACACCCCATGAA+GGG | + | chr3_3:50004492-50004511 | Msa0456430:intron | 50.0% | |
| TCCTTATCGTTTCGGCTGTC+AGG | + | chr3_3:50004976-50004995 | Msa0456430:three_prime_UTR | 50.0% | |
| GAAGAAATCATCGGGAGGCG+CGG | + | chr3_3:50001053-50001072 | Msa0456430:CDS | 55.0% | |
| AGAAACCCTAGGAGGGACGT+CGG | - | chr3_3:50001124-50001143 | None:intergenic | 55.0% | |
| TGACATGGGTGCGTGTACCA+CGG | + | chr3_3:50002311-50002330 | Msa0456430:intron | 55.0% | |
| ! | CACCCTTTTCTTCGGCCTCA+TGG | + | chr3_3:50004124-50004143 | Msa0456430:intron | 55.0% |
| TTTCCCCAACATCCTTGCGG+AGG | + | chr3_3:50004222-50004241 | Msa0456430:CDS | 55.0% | |
| CTTCCTCCGCAAGGATGTTG+GGG | - | chr3_3:50004228-50004247 | None:intergenic | 55.0% | |
| GCTTCCTCCGCAAGGATGTT+GGG | - | chr3_3:50004229-50004248 | None:intergenic | 55.0% | |
| TGCTTCCTCCGCAAGGATGT+TGG | - | chr3_3:50004230-50004249 | None:intergenic | 55.0% | |
| CTTGCCCTTGCAGCTTCATC+AGG | - | chr3_3:50004376-50004395 | None:intergenic | 55.0% | |
| CTGATGAAGCTGCAAGGGCA+AGG | + | chr3_3:50004374-50004393 | Msa0456430:CDS | 55.0% | |
| GGATCTACGACACCCCATGA+AGG | + | chr3_3:50004491-50004510 | Msa0456430:intron | 55.0% | |
| TCCACTGATGCTGCCTCACA+AGG | + | chr3_3:50004681-50004700 | Msa0456430:CDS | 55.0% | |
| TCCTGTTGTGCTGCCTTGTG+AGG | - | chr3_3:50004697-50004716 | None:intergenic | 55.0% | |
| ACAAGGCAGCACAACAGGAC+CGG | + | chr3_3:50004698-50004717 | Msa0456430:CDS | 55.0% | |
| TCGGTTGGAGCTTCATGCTC+CGG | - | chr3_3:50004720-50004739 | None:intergenic | 55.0% | |
| GCCTGACAGCCGAAACGATA+AGG | - | chr3_3:50004980-50004999 | None:intergenic | 55.0% | |
| GAAGAAATCATCGGGAGGCG+CGG | + | chr3_3:50001053-50001072 | Msa0456430:CDS | 55.0% | |
| AGAAACCCTAGGAGGGACGT+CGG | - | chr3_3:50001124-50001143 | None:intergenic | 55.0% | |
| TGACATGGGTGCGTGTACCA+CGG | + | chr3_3:50002311-50002330 | Msa0456430:intron | 55.0% | |
| ! | CACCCTTTTCTTCGGCCTCA+TGG | + | chr3_3:50004124-50004143 | Msa0456430:intron | 55.0% |
| TTTCCCCAACATCCTTGCGG+AGG | + | chr3_3:50004222-50004241 | Msa0456430:CDS | 55.0% | |
| CTTCCTCCGCAAGGATGTTG+GGG | - | chr3_3:50004228-50004247 | None:intergenic | 55.0% | |
| GCTTCCTCCGCAAGGATGTT+GGG | - | chr3_3:50004229-50004248 | None:intergenic | 55.0% | |
| TGCTTCCTCCGCAAGGATGT+TGG | - | chr3_3:50004230-50004249 | None:intergenic | 55.0% | |
| CTTGCCCTTGCAGCTTCATC+AGG | - | chr3_3:50004376-50004395 | None:intergenic | 55.0% | |
| CTGATGAAGCTGCAAGGGCA+AGG | + | chr3_3:50004374-50004393 | Msa0456430:CDS | 55.0% | |
| GGATCTACGACACCCCATGA+AGG | + | chr3_3:50004491-50004510 | Msa0456430:intron | 55.0% | |
| TCCACTGATGCTGCCTCACA+AGG | + | chr3_3:50004681-50004700 | Msa0456430:CDS | 55.0% | |
| TCCTGTTGTGCTGCCTTGTG+AGG | - | chr3_3:50004697-50004716 | None:intergenic | 55.0% | |
| ACAAGGCAGCACAACAGGAC+CGG | + | chr3_3:50004698-50004717 | Msa0456430:CDS | 55.0% | |
| TCGGTTGGAGCTTCATGCTC+CGG | - | chr3_3:50004720-50004739 | None:intergenic | 55.0% | |
| GCCTGACAGCCGAAACGATA+AGG | - | chr3_3:50004980-50004999 | None:intergenic | 55.0% | |
| GTGGTACACGCACCCATGTC+AGG | - | chr3_3:50002312-50002331 | None:intergenic | 60.0% | |
| !! | GCAGTGTTGCTTCCTCCGCA+AGG | - | chr3_3:50004237-50004256 | None:intergenic | 60.0% |
| GCCTTGTGAGGCAGCATCAG+TGG | - | chr3_3:50004685-50004704 | None:intergenic | 60.0% | |
| GCCTCACAAGGCAGCACAAC+AGG | + | chr3_3:50004693-50004712 | Msa0456430:CDS | 60.0% | |
| GTGGTACACGCACCCATGTC+AGG | - | chr3_3:50002312-50002331 | None:intergenic | 60.0% | |
| !! | GCAGTGTTGCTTCCTCCGCA+AGG | - | chr3_3:50004237-50004256 | None:intergenic | 60.0% |
| GCCTTGTGAGGCAGCATCAG+TGG | - | chr3_3:50004685-50004704 | None:intergenic | 60.0% | |
| GCCTCACAAGGCAGCACAAC+AGG | + | chr3_3:50004693-50004712 | Msa0456430:CDS | 60.0% | |
| ! | GATCTGGTGCGGAGGAGCGT+CGG | - | chr3_3:50001095-50001114 | None:intergenic | 65.0% |
| GTCGGAGGAGGGATCTGGTG+CGG | - | chr3_3:50001106-50001125 | None:intergenic | 65.0% | |
| CTAGGAGGGACGTCGGAGGA+GGG | - | chr3_3:50001117-50001136 | None:intergenic | 65.0% | |
| CTCCTCCGACGTCCCTCCTA+GGG | + | chr3_3:50001116-50001135 | Msa0456430:CDS | 65.0% | |
| AACCCTAGGAGGGACGTCGG+AGG | - | chr3_3:50001121-50001140 | None:intergenic | 65.0% | |
| CACGCACCCATGTCAGGCAG+AGG | - | chr3_3:50002306-50002325 | None:intergenic | 65.0% | |
| GGCAGCATCAGTGGACCCTG+TGG | - | chr3_3:50004676-50004695 | None:intergenic | 65.0% | |
| ! | GATCTGGTGCGGAGGAGCGT+CGG | - | chr3_3:50001095-50001114 | None:intergenic | 65.0% |
| GTCGGAGGAGGGATCTGGTG+CGG | - | chr3_3:50001106-50001125 | None:intergenic | 65.0% | |
| CTAGGAGGGACGTCGGAGGA+GGG | - | chr3_3:50001117-50001136 | None:intergenic | 65.0% | |
| CTCCTCCGACGTCCCTCCTA+GGG | + | chr3_3:50001116-50001135 | Msa0456430:CDS | 65.0% | |
| AACCCTAGGAGGGACGTCGG+AGG | - | chr3_3:50001121-50001140 | None:intergenic | 65.0% | |
| CACGCACCCATGTCAGGCAG+AGG | - | chr3_3:50002306-50002325 | None:intergenic | 65.0% | |
| GGCAGCATCAGTGGACCCTG+TGG | - | chr3_3:50004676-50004695 | None:intergenic | 65.0% | |
| GGAGGAGGGATCTGGTGCGG+AGG | - | chr3_3:50001103-50001122 | None:intergenic | 70.0% | |
| GGGACGTCGGAGGAGGGATC+TGG | - | chr3_3:50001111-50001130 | None:intergenic | 70.0% | |
| CCTAGGAGGGACGTCGGAGG+AGG | - | chr3_3:50001118-50001137 | None:intergenic | 70.0% | |
| CCTCCTCCGACGTCCCTCCT+AGG | + | chr3_3:50001115-50001134 | Msa0456430:CDS | 70.0% | |
| GGAGGAGGGATCTGGTGCGG+AGG | - | chr3_3:50001103-50001122 | None:intergenic | 70.0% | |
| GGGACGTCGGAGGAGGGATC+TGG | - | chr3_3:50001111-50001130 | None:intergenic | 70.0% | |
| CCTAGGAGGGACGTCGGAGG+AGG | - | chr3_3:50001118-50001137 | None:intergenic | 70.0% | |
| CCTCCTCCGACGTCCCTCCT+AGG | + | chr3_3:50001115-50001134 | Msa0456430:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 50000927 | 50005008 | 50000927 | ID=Msa0456430;Name=Msa0456430 |
| chr3_3 | mRNA | 50000927 | 50005008 | 50000927 | ID=Msa0456430-mRNA-1;Parent=Msa0456430;Name=Msa0456430-mRNA-1;_AED=0.01;_eAED=0.01;_QI=124|1|1|1|0.75|1|5|172|364 |
| chr3_3 | exon | 50000927 | 50001137 | 50000927 | ID=Msa0456430-mRNA-1:exon:9566;Parent=Msa0456430-mRNA-1 |
| chr3_3 | exon | 50001776 | 50002090 | 50001776 | ID=Msa0456430-mRNA-1:exon:9567;Parent=Msa0456430-mRNA-1 |
| chr3_3 | exon | 50002714 | 50002915 | 50002714 | ID=Msa0456430-mRNA-1:exon:9568;Parent=Msa0456430-mRNA-1 |
| chr3_3 | exon | 50004167 | 50004395 | 50004167 | ID=Msa0456430-mRNA-1:exon:9569;Parent=Msa0456430-mRNA-1 |
| chr3_3 | exon | 50004575 | 50005008 | 50004575 | ID=Msa0456430-mRNA-1:exon:9570;Parent=Msa0456430-mRNA-1 |
| chr3_3 | five_prime_UTR | 50000927 | 50001050 | 50000927 | ID=Msa0456430-mRNA-1:five_prime_utr;Parent=Msa0456430-mRNA-1 |
| chr3_3 | CDS | 50001051 | 50001137 | 50001051 | ID=Msa0456430-mRNA-1:cds;Parent=Msa0456430-mRNA-1 |
| chr3_3 | CDS | 50001776 | 50002090 | 50001776 | ID=Msa0456430-mRNA-1:cds;Parent=Msa0456430-mRNA-1 |
| chr3_3 | CDS | 50002714 | 50002915 | 50002714 | ID=Msa0456430-mRNA-1:cds;Parent=Msa0456430-mRNA-1 |
| chr3_3 | CDS | 50004167 | 50004395 | 50004167 | ID=Msa0456430-mRNA-1:cds;Parent=Msa0456430-mRNA-1 |
| chr3_3 | CDS | 50004575 | 50004836 | 50004575 | ID=Msa0456430-mRNA-1:cds;Parent=Msa0456430-mRNA-1 |
| chr3_3 | three_prime_UTR | 50004837 | 50005008 | 50004837 | ID=Msa0456430-mRNA-1:three_prime_utr;Parent=Msa0456430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
