Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0528940 | 0.802968 | 4.361175e-49 | -8.615850e-47 |
| Msa0043940 | Msa0528940 | 0.821425 | 4.064827e-53 | -8.615850e-47 |
| Msa0050580 | Msa0528940 | 0.806503 | 7.972054e-50 | -8.615850e-47 |
| Msa0077410 | Msa0528940 | 0.951024 | 4.877177e-109 | -8.615850e-47 |
| Msa0092710 | Msa0528940 | 0.817274 | 3.589334e-52 | -8.615850e-47 |
| Msa0092730 | Msa0528940 | 0.802625 | 5.132811e-49 | -8.615850e-47 |
| Msa0125280 | Msa0528940 | 0.947558 | 5.321931e-106 | -8.615850e-47 |
| Msa0143080 | Msa0528940 | 0.806220 | 9.144288e-50 | -8.615850e-47 |
| Msa0143970 | Msa0528940 | 0.803403 | 3.544146e-49 | -8.615850e-47 |
| Msa0146470 | Msa0528940 | 0.800323 | 1.521384e-48 | -8.615850e-47 |
| Msa0157350 | Msa0528940 | 0.804409 | 2.190284e-49 | -8.615850e-47 |
| Msa0170040 | Msa0528940 | 0.908804 | 1.145437e-81 | -8.615850e-47 |
| Msa0182640 | Msa0528940 | 0.801108 | 1.052091e-48 | -8.615850e-47 |
| Msa0370600 | Msa0528940 | 0.803486 | 3.406583e-49 | -8.615850e-47 |
| Msa0398590 | Msa0528940 | 0.801457 | 8.924762e-49 | -8.615850e-47 |
| Msa0408640 | Msa0528940 | 0.820759 | 5.789051e-53 | -8.615850e-47 |
| Msa0277530 | Msa0528940 | 0.802376 | 5.778026e-49 | -8.615850e-47 |
| Msa0323990 | Msa0528940 | 0.805323 | 1.410862e-49 | -8.615850e-47 |
| Msa0351510 | Msa0528940 | 0.805692 | 1.180830e-49 | -8.615850e-47 |
| Msa0361250 | Msa0528940 | 0.817152 | 3.823508e-52 | -8.615850e-47 |
| Msa0361260 | Msa0528940 | 0.830982 | 2.160619e-55 | -8.615850e-47 |
| Msa0519200 | Msa0528940 | 0.819904 | 9.088897e-53 | -8.615850e-47 |
| Msa0524210 | Msa0528940 | 0.811306 | 7.479265e-51 | -8.615850e-47 |
| Msa0528940 | Msa0537270 | 0.811830 | 5.753064e-51 | -8.615850e-47 |
| Msa0528940 | Msa0538570 | 0.827407 | 1.591436e-54 | -8.615850e-47 |
| Msa0528940 | Msa0544220 | 0.815099 | 1.099344e-51 | -8.615850e-47 |
| Msa0528940 | Msa0561510 | 0.813189 | 2.903188e-51 | -8.615850e-47 |
| Msa0528940 | Msa0593710 | 0.827674 | 1.373126e-54 | -8.615850e-47 |
| Msa0528940 | Msa0594390 | 0.806295 | 8.818341e-50 | -8.615850e-47 |
| Msa0528940 | Msa0601110 | 0.826731 | 2.309088e-54 | -8.615850e-47 |
| Msa0528940 | Msa0601120 | 0.825263 | 5.155908e-54 | -8.615850e-47 |
| Msa0528940 | Msa0607480 | 0.814867 | 1.238250e-51 | -8.615850e-47 |
| Msa0528940 | Msa0633750 | 0.813001 | 3.191826e-51 | -8.615850e-47 |
| Msa0528940 | Msa0634270 | 0.805733 | 1.157506e-49 | -8.615850e-47 |
| Msa0528940 | Msa0640990 | 0.825134 | 5.530788e-54 | -8.615850e-47 |
| Msa0528940 | Msa0641620 | 0.832161 | 1.107052e-55 | -8.615850e-47 |
| Msa0528940 | Msa0642650 | 0.816619 | 5.036284e-52 | -8.615850e-47 |
| Msa0528940 | Msa0667970 | 0.816052 | 6.744813e-52 | -8.615850e-47 |
| Msa0528940 | Msa0678890 | 0.800311 | 1.529789e-48 | -8.615850e-47 |
| Msa0528940 | Msa0703720 | 0.804397 | 2.202829e-49 | -8.615850e-47 |
| Msa0528940 | Msa0703760 | 0.806743 | 7.091710e-50 | -8.615850e-47 |
| Msa0528940 | Msa0722940 | 0.800995 | 1.109526e-48 | -8.615850e-47 |
| Msa0528940 | Msa0723150 | 0.803181 | 3.940133e-49 | -8.615850e-47 |
| Msa0528940 | Msa0725920 | 0.853034 | 3.118945e-61 | -8.615850e-47 |
| Msa0528940 | Msa0738880 | 0.800367 | 1.490140e-48 | -8.615850e-47 |
| Msa0528940 | Msa0766470 | 0.842308 | 2.799319e-58 | -8.615850e-47 |
| Msa0528940 | Msa0803130 | 0.806604 | 7.587784e-50 | -8.615850e-47 |
| Msa0528940 | Msa0841490 | 0.802575 | 5.256597e-49 | -8.615850e-47 |
| Msa0528940 | Msa0846030 | 0.836872 | 7.251963e-57 | -8.615850e-47 |
| Msa0528940 | Msa0931480 | 0.826227 | 3.046303e-54 | -8.615850e-47 |
| Msa0528940 | Msa0951460 | 0.811606 | 6.437240e-51 | -8.615850e-47 |
| Msa0528940 | Msa0951960 | 0.802735 | 4.871818e-49 | -8.615850e-47 |
| Msa0528940 | Msa0955260 | 0.805627 | 1.218250e-49 | -8.615850e-47 |
| Msa0528940 | Msa1014270 | 0.802500 | 5.446811e-49 | -8.615850e-47 |
| Msa0528940 | Msa1027790 | 0.805983 | 1.025629e-49 | -8.615850e-47 |
| Msa0528940 | Msa1030870 | 0.801535 | 8.602346e-49 | -8.615850e-47 |
| Msa0528940 | Msa1112610 | 0.803589 | 3.242916e-49 | -8.615850e-47 |
| Msa0528940 | Msa1157730 | 0.815568 | 8.650040e-52 | -8.615850e-47 |
| Msa0528940 | Msa1197110 | 0.819508 | 1.119760e-52 | -8.615850e-47 |
| Msa0528940 | Msa1355400 | 0.801856 | 7.391935e-49 | -8.615850e-47 |
| Msa0528940 | Msa1365020 | 0.829289 | 5.594046e-55 | -8.615850e-47 |
| Msa0528940 | Msa1365870 | 0.816744 | 4.722279e-52 | -8.615850e-47 |
| Msa0528940 | Msa1367410 | 0.823151 | 1.616548e-53 | -8.615850e-47 |
| Msa0528940 | Msa1417650 | 0.812485 | 4.139900e-51 | -8.615850e-47 |
| Msa0528940 | Msa1434020 | 0.854750 | 1.000000e-61 | -8.615850e-47 |
| Msa0528940 | Msa1439120 | 0.816042 | 6.780014e-52 | -8.615850e-47 |
| Msa0528940 | Msa1439670 | 0.805780 | 1.131366e-49 | -8.615850e-47 |
| Msa0528940 | Msa1440220 | 0.810421 | 1.162386e-50 | -8.615850e-47 |
| Msa0528940 | Msa1444450 | 0.832133 | 1.124530e-55 | -8.615850e-47 |
| Msa0528940 | Msa1455660 | 0.817398 | 3.367222e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 252 sgRNAs with CRISPR-Local
Find 678 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGTGGAGGTGGTGGTTT+TGG | 0.165985 | 4_1:+1936114 | Msa0528940:CDS |
| TTTGGCAAAGGTGGAGGTTT+TGG | 0.194933 | 4_1:+1936270 | Msa0528940:CDS |
| AAGGGAGGTGGGTTTGGAGG+TGG | 0.199064 | 4_1:+1935226 | Msa0528940:CDS |
| GGTGGTGTTGGAGGTGGTTC+TGG | 0.211561 | 4_1:+1936096 | Msa0528940:CDS |
| GTTGGAGGAGGTGGTGGTTC+TGG | 0.212985 | 4_1:+1936228 | Msa0528940:CDS |
| GCTGGTGGAGGTGGTGGATT+TGG | 0.216653 | 4_1:+1935484 | Msa0528940:CDS |
| AAAGGTGGTGGTGGAGGTTT+TGG | 0.219113 | 4_1:+1935700 | Msa0528940:CDS |
| GGAGGAGAAGGAGGTGGTTT+TGG | 0.220744 | 4_1:+1936372 | Msa0528940:CDS |
| GGTGGGTTTGGAGGTGGGTT+TGG | 0.225129 | 4_1:+1935232 | Msa0528940:CDS |
| GGTGGTGCTGGAGGAGGTTC+TGG | 0.231131 | 4_1:+1936294 | Msa0528940:CDS |
| GGTGGTATTGGAGGAGGTTC+TGG | 0.235486 | 4_1:+1936066 | Msa0528940:CDS |
| GGTGGTGCAGGAGGTGGAGG+AGG | 0.245112 | 4_1:+1935316 | Msa0528940:CDS |
| GGTGGTTCAGGTGGAGGTTT+TGG | 0.247596 | 4_1:+1936198 | Msa0528940:CDS |
| TTTGGTGGAGGAGGAGGATT+TGG | 0.255853 | 4_1:+1935292 | Msa0528940:CDS |
| TTTGGAGGTGGGTTTGGTGG+TGG | 0.259812 | 4_1:+1935238 | Msa0528940:CDS |
| CTTGGTGGTGGTGGAGGCTT+TGG | 0.269777 | 4_1:+1935832 | Msa0528940:CDS |
| GCAGGAGGTGGAGGAGGGTT+TGG | 0.270174 | 4_1:+1935322 | Msa0528940:CDS |
| GGTGGGTTTGGTGGTGGAGG+AGG | 0.277967 | 4_1:+1935244 | Msa0528940:CDS |
| ATTGGAGGTGGAGGAGGGTT+TGG | 0.278848 | 4_1:+1935370 | Msa0528940:CDS |
| GGTGGCGGCGGTGGTGGTTT+TGG | 0.281565 | 4_1:+1935274 | Msa0528940:CDS |
| CTTGGTGGTGGCGGAGGCTT+TGG | 0.285191 | 4_1:+1935898 | Msa0528940:CDS |
| GGCGGTGGAGGTGCCGGAGG+AGG | 0.287032 | 4_1:+1935394 | Msa0528940:CDS |
| GGAGGTTCTGGTGGTGGTAT+TGG | 0.287110 | 4_1:+1936306 | Msa0528940:CDS |
| TTCGGCAAAGGTGGTGGCTT+TGG | 0.289097 | 4_1:+1936336 | Msa0528940:CDS |
| TTTGGTGGTGGAGGAGGAGC+TGG | 0.289352 | 4_1:+1935250 | Msa0528940:CDS |
| GGTGGGATCGGAAAAGGTTT+TGG | 0.289437 | 4_1:+1936162 | Msa0528940:CDS |
| GGTGGTGTTGGAGGAGGGTC+AGG | 0.293111 | 4_1:+1935634 | Msa0528940:CDS |
| TTTGGCAAGGGAGGTGGGTT+TGG | 0.295858 | 4_1:+1935220 | Msa0528940:CDS |
| GGTGGCTTTGGAGGAGGTCT+TGG | 0.295907 | 4_1:+1936348 | Msa0528940:CDS |
| CTTGGAGGTGGTGGAGGCTT+TGG | 0.296213 | 4_1:+1935766 | Msa0528940:CDS |
| GGCGGCATTGGAGGTGGATT+TGG | 0.296515 | 4_1:+1936252 | Msa0528940:CDS |
| TTTGGAAAGGGCGGTGGCCT+TGG | 0.301120 | 4_1:+1935664 | Msa0528940:CDS |
| GGAGGTGGGTTTGGTGGTGG+AGG | 0.302727 | 4_1:+1935241 | Msa0528940:CDS |
| GGCAAGGGAGGTGGGTTTGG+AGG | 0.303594 | 4_1:+1935223 | Msa0528940:CDS |
| CTGAGCATCGACGTTAATAT+TGG | 0.306532 | 4_1:+1936449 | Msa0528940:exon |
| GGTGGTGTTGGTGGTGGAAT+TGG | 0.306666 | 4_1:+1935862 | Msa0528940:CDS |
| GGAGGTGGAGGCGGTGGAAT+TGG | 0.309472 | 4_1:+1936420 | Msa0528940:CDS |
| GGAGGAGGGTTTGGTGGCGG+TGG | 0.309768 | 4_1:+1935379 | Msa0528940:CDS |
| GGTGGTCATGGTGGCGGCTT+CGG | 0.317244 | 4_1:+1935526 | Msa0528940:CDS |
| GGAGCTGGTGGTGGCGGCGG+TGG | 0.318038 | 4_1:+1935265 | Msa0528940:CDS |
| GGCGGTGGTGTTGGAGGAGG+TGG | 0.318186 | 4_1:+1936219 | Msa0528940:CDS |
| GGTGGAGGAGGGTTTGGTGG+TGG | 0.320331 | 4_1:+1935328 | Msa0528940:CDS |
| ACTTGGAGGTGGTCATGGTG+GGG | 0.322552 | 4_1:+1935561 | Msa0528940:CDS |
| ATCGGTAAAGGTGGAGGTTT+AGG | 0.322962 | 4_1:+1936042 | Msa0528940:CDS |
| AGGGAGGTGGGTTTGGAGGT+GGG | 0.324505 | 4_1:+1935227 | Msa0528940:CDS |
| TTTGGAAAAGGTGGAGGACT+TGG | 0.325677 | 4_1:+1935502 | Msa0528940:CDS |
| GTCGGGTTTGGCAAGGGAGG+TGG | 0.326964 | 4_1:+1935214 | Msa0528940:CDS |
| GGAGGTTTAGGTGGTGGTAT+TGG | 0.329647 | 4_1:+1936054 | Msa0528940:CDS |
| TTTGGTGGTGGTGCAGGAGG+TGG | 0.331845 | 4_1:+1935310 | Msa0528940:CDS |
| GGTGGCGGTGGCGGAGGAGG+TGG | 0.332736 | 4_1:+1936405 | Msa0528940:CDS |
| TCTGGTGGAGGTGGTGGTGT+TGG | 0.332929 | 4_1:+1936084 | Msa0528940:CDS |
| GGAGGGTCAGGTGGTGGCTT+TGG | 0.333970 | 4_1:+1935646 | Msa0528940:CDS |
| TTTGGTGGCGGTGGCGGAGG+AGG | 0.334748 | 4_1:+1936402 | Msa0528940:CDS |
| GGTGGTTCTGGTGGCGGCAT+TGG | 0.335418 | 4_1:+1936240 | Msa0528940:CDS |
| GGGTTTGGAGGTGGGTTTGG+TGG | 0.336197 | 4_1:+1935235 | Msa0528940:CDS |
| GACTTGGAGGTGGTCATGGT+GGG | 0.336292 | 4_1:+1935560 | Msa0528940:CDS |
| GGCGGAGGAGGTGGAGGCGG+TGG | 0.337819 | 4_1:+1936414 | Msa0528940:CDS |
| GGGTTTGGTGGCGGTGGCGG+AGG | 0.342976 | 4_1:+1936399 | Msa0528940:CDS |
| GGAGGTGGAGGAGGGTTTGG+TGG | 0.344361 | 4_1:+1935325 | Msa0528940:CDS |
| CTTGGAGGTGGTCATGGTGG+GGG | 0.344969 | 4_1:+1935562 | Msa0528940:CDS |
| GGAGGATTTGGTGGTGGTGC+AGG | 0.349433 | 4_1:+1935304 | Msa0528940:CDS |
| GGAGGGTTTGGTGGCGGTGG+AGG | 0.349976 | 4_1:+1935382 | Msa0528940:CDS |
| GGACTTGGAGGTGGTCATGG+TGG | 0.351092 | 4_1:+1935559 | Msa0528940:CDS |
| TTTGGAGGCGGTTCTGGTAC+TGG | 0.352224 | 4_1:+1936132 | Msa0528940:CDS |
| GGTGGAGGGTTTGGTGGCGG+TGG | 0.352612 | 4_1:+1936393 | Msa0528940:CDS |
| GGAGGGTTTGGTGGCGGTGG+CGG | 0.352742 | 4_1:+1936396 | Msa0528940:CDS |
| GGTGGTTCTGGTGGAGGTGG+TGG | 0.355379 | 4_1:+1936108 | Msa0528940:CDS |
| GGTGTTGGAGGAGGGTCAGG+TGG | 0.357819 | 4_1:+1935637 | Msa0528940:CDS |
| ATTGGCAAAGGTGGAGGTCT+TGG | 0.358510 | 4_1:+1935748 | Msa0528940:CDS |
| TTTGGTGGAGGGTTTGGTGG+CGG | 0.358705 | 4_1:+1936390 | Msa0528940:CDS |
| GCTGGTGGTGGCGGCGGTGG+TGG | 0.359090 | 4_1:+1935268 | Msa0528940:CDS |
| TTCGGAGGTGGTGGTGGAAT+TGG | 0.360987 | 4_1:+1935604 | Msa0528940:CDS |
| TTTGGAAAGGGCGGTGGTGT+TGG | 0.362296 | 4_1:+1935718 | Msa0528940:CDS |
| GGTGGTGGTGCAGGAGGTGG+AGG | 0.363511 | 4_1:+1935313 | Msa0528940:CDS |
| GGAGGAGCTGGTGGTGGCGG+CGG | 0.364205 | 4_1:+1935262 | Msa0528940:CDS |
| GGCGGTGGCGGAGGAGGTGG+AGG | 0.365714 | 4_1:+1936408 | Msa0528940:CDS |
| GTTGGAGGTGGTTCTGGTGG+AGG | 0.367615 | 4_1:+1936102 | Msa0528940:CDS |
| GGAGGTTCTGGTGGAGGTGG+TGG | 0.368555 | 4_1:+1936078 | Msa0528940:CDS |
| GGAGGTCTTGGTGGAGGAGA+AGG | 0.374681 | 4_1:+1936360 | Msa0528940:CDS |
| GGAGGAGGAGCTGGTGGTGG+CGG | 0.374914 | 4_1:+1935259 | Msa0528940:CDS |
| GGAGGGTTTGGTGGTGGTGC+AGG | 0.376644 | 4_1:+1935334 | Msa0528940:CDS |
| GGTGGTGTTGGAGGTGGAAT+TGG | 0.377169 | 4_1:+1935730 | Msa0528940:CDS |
| GCAGGCGGCGGACATGGAAT+TGG | 0.378074 | 4_1:+1935352 | Msa0528940:CDS |
| GGTGGAGGAGGGTTTGGTGG+CGG | 0.378499 | 4_1:+1935376 | Msa0528940:CDS |
| GGAGGTCTTGGTGGTGGTGG+AGG | 0.378620 | 4_1:+1935826 | Msa0528940:CDS |
| AAAGGTGGTGGTGTTGGAGG+AGG | 0.380016 | 4_1:+1935628 | Msa0528940:CDS |
| GGAAAAGGTGGTGGTGTTGG+TGG | 0.382045 | 4_1:+1935853 | Msa0528940:CDS |
| GGCTTTGGAGGAGGTCTTGG+TGG | 0.383032 | 4_1:+1936351 | Msa0528940:CDS |
| GGAAAGGGCGGTGGCCTTGG+AGG | 0.384822 | 4_1:+1935667 | Msa0528940:CDS |
| TTTGGTGGCGGTGGAGGTGC+CGG | 0.388517 | 4_1:+1935388 | Msa0528940:CDS |
| GGAGGTGCCGGAGGAGGGCA+TGG | 0.389079 | 4_1:+1935400 | Msa0528940:CDS |
| GGGGCATTGGCAAAGGTGGG+GGG | 0.389523 | 4_1:+1935581 | Msa0528940:CDS |
| GGAGGTGGAGGAGGGTTTGG+TGG | 0.392094 | 4_1:+1935373 | Msa0528940:CDS |
| ATCGGAAAAGGTGGAGGTCT+TGG | 0.392536 | 4_1:+1935814 | Msa0528940:CDS |
| GGTGGAGGTCTTGGTGGTGG+TGG | 0.394118 | 4_1:+1935823 | Msa0528940:CDS |
| GGTTTAGGTGGTGGTATTGG+AGG | 0.395260 | 4_1:+1936057 | Msa0528940:CDS |
| GGAGGTGGTGGTGTTGGAGG+TGG | 0.395507 | 4_1:+1936090 | Msa0528940:CDS |
| GGAGGTGGTTCTGGTGGAGG+TGG | 0.396658 | 4_1:+1936105 | Msa0528940:CDS |
| TTTGGAAAAGGTGGTGGTGT+TGG | 0.396726 | 4_1:+1935850 | Msa0528940:CDS |
| GGTGGAGGAGGAGCTGGTGG+TGG | 0.397507 | 4_1:+1935256 | Msa0528940:CDS |
| GGTGGAGGTGGTGGTGTTGG+AGG | 0.397668 | 4_1:+1936087 | Msa0528940:CDS |
| GGTGGTATTGGTGGAGGGTT+CGG | 0.398620 | 4_1:+1936318 | Msa0528940:CDS |
| GGTGGTGCAGGCGGCGGACA+TGG | 0.401478 | 4_1:+1935346 | Msa0528940:CDS |
| GGAGGAGGGCATGGGATTGG+AGG | 0.403180 | 4_1:+1935409 | Msa0528940:CDS |
| GGTTCTGGTGGTGGTATTGG+TGG | 0.404109 | 4_1:+1936309 | Msa0528940:CDS |
| ATTGGTAAAGGTGGCGGACT+TGG | 0.405771 | 4_1:+1935436 | Msa0528940:intron |
| ATTGGTGGTGGGATCGGAAA+AGG | 0.406406 | 4_1:+1936156 | Msa0528940:CDS |
| GGTGGAATTGGCAAAGGTGG+TGG | 0.406703 | 4_1:+1935616 | Msa0528940:CDS |
| GGCGGTTCTGGTACTGGAAT+TGG | 0.406873 | 4_1:+1936138 | Msa0528940:CDS |
| GGTGGTGGAGGCTTTGGAAA+AGG | 0.407364 | 4_1:+1935838 | Msa0528940:CDS |
| TTTGGTGGTGGTGCTGGAGG+AGG | 0.409927 | 4_1:+1936288 | Msa0528940:CDS |
| TTTGGCGGTGGTGTTGGAGG+AGG | 0.410035 | 4_1:+1936216 | Msa0528940:CDS |
| GGAGGAGGTTCTGGTGGAGG+TGG | 0.410924 | 4_1:+1936075 | Msa0528940:CDS |
| GGAGGTCTTGGAGGTGGTGG+AGG | 0.411167 | 4_1:+1935760 | Msa0528940:CDS |
| TTCGGAAAGGGTGGAGGACT+TGG | 0.413350 | 4_1:+1935544 | Msa0528940:CDS |
| GGAGGACTTGGAGGTGGTCA+TGG | 0.413918 | 4_1:+1935556 | Msa0528940:CDS |
| CATGGTGGCGGCTTCGGAAA+GGG | 0.414567 | 4_1:+1935532 | Msa0528940:CDS |
| AAAGGTGGTGGTGTTGGTGG+TGG | 0.414689 | 4_1:+1935856 | Msa0528940:CDS |
| TCTGGTGGCGGCATTGGAGG+TGG | 0.417010 | 4_1:+1936246 | Msa0528940:CDS |
| GGTGGCGGAGGAGGTGGAGG+CGG | 0.418925 | 4_1:+1936411 | Msa0528940:CDS |
| GGTTCTGGTGGCGGCATTGG+AGG | 0.419796 | 4_1:+1936243 | Msa0528940:CDS |
| GGAGGTGGTGGTTCTGGTGG+CGG | 0.420131 | 4_1:+1936234 | Msa0528940:CDS |
| GTTGGAGGAGGGTCAGGTGG+TGG | 0.420636 | 4_1:+1935640 | Msa0528940:CDS |
| GGTGGATTTGGCAAAGGTGG+AGG | 0.420851 | 4_1:+1936264 | Msa0528940:CDS |
| GCCGGAGGAGGGCATGGGAT+TGG | 0.421554 | 4_1:+1935406 | Msa0528940:CDS |
| GTGGGATAGGAAAAGGTGGG+GGG | 0.421664 | 4_1:+1935461 | Msa0528940:CDS |
| AAAGGTGGCGGACTTGGTGG+TGG | 0.421826 | 4_1:+1935442 | Msa0528940:intron |
| TCTGGTGGTGGTATTGGTGG+AGG | 0.424704 | 4_1:+1936312 | Msa0528940:CDS |
| GGAGGACTTGGTGGTGGCGG+AGG | 0.426777 | 4_1:+1935892 | Msa0528940:CDS |
| ATTGGCAAAGGTGGTGGTGT+TGG | 0.427581 | 4_1:+1935622 | Msa0528940:CDS |
| AAAGGTGGTGGCATTGGAGG+TGG | 0.427769 | 4_1:+1935790 | Msa0528940:CDS |
| AAAGGTGGTGGCATTGGAGG+TGG | 0.427769 | 4_1:+1936018 | Msa0528940:intron |
| GGGTTTGGTGGTGGTGCAGG+CGG | 0.427991 | 4_1:+1935337 | Msa0528940:CDS |
| TTTGGTGGTGGTGCAGGCGG+CGG | 0.428479 | 4_1:+1935340 | Msa0528940:CDS |
| AAGGGCGGTGGTGTTGGAGG+TGG | 0.430503 | 4_1:+1935724 | Msa0528940:CDS |
| GGAGGGTTCGGCAAAGGTGG+TGG | 0.431822 | 4_1:+1936330 | Msa0528940:CDS |
| ATTGGAGGAGGTTCTGGTGG+AGG | 0.431983 | 4_1:+1936072 | Msa0528940:CDS |
| ATTGGCAAAGGTGGAGGACT+TGG | 0.434057 | 4_1:+1935880 | Msa0528940:CDS |
| GGAAAGGGCGGTGGTGTTGG+AGG | 0.435176 | 4_1:+1935721 | Msa0528940:CDS |
| TTAGGTGGTGGTATTGGAGG+AGG | 0.437276 | 4_1:+1936060 | Msa0528940:CDS |
| GGAGGACTTGGAGGTGGTCA+TGG | 0.439602 | 4_1:+1935514 | Msa0528940:CDS |
| TTTGGAAAAGGTGGTGGCAT+TGG | 0.441763 | 4_1:+1935784 | Msa0528940:CDS |
| TTTGGAAAAGGTGGTGGCAT+TGG | 0.441763 | 4_1:+1936012 | Msa0528940:intron |
| TCAGGTGGTGGCTTTGGAAA+GGG | 0.442004 | 4_1:+1935652 | Msa0528940:CDS |
| CTGGTACTGGAATTGGTGGT+GGG | 0.443587 | 4_1:+1936145 | Msa0528940:CDS |
| GTGGTGCAGGAGGTGGAGGA+GGG | 0.445570 | 4_1:+1935317 | Msa0528940:CDS |
| GCGGTGGAGGTGCCGGAGGA+GGG | 0.445726 | 4_1:+1935395 | Msa0528940:CDS |
| GGCAAAGGTGGTGGCTTTGG+AGG | 0.446852 | 4_1:+1936339 | Msa0528940:CDS |
| GGTGGAGGAGGAGGATTTGG+TGG | 0.446952 | 4_1:+1935295 | Msa0528940:CDS |
| GGAAAAGGTGGAGGACTTGG+AGG | 0.448436 | 4_1:+1935505 | Msa0528940:CDS |
| GGTGGCATTGGAGGTGGAAT+CGG | 0.450828 | 4_1:+1935796 | Msa0528940:CDS |
| GTCAGGTGGTGGCTTTGGAA+AGG | 0.452017 | 4_1:+1935651 | Msa0528940:CDS |
| TTTGGAGGAGGTCTTGGTGG+AGG | 0.452382 | 4_1:+1936354 | Msa0528940:CDS |
| CTTGGAGGTGGTCATGGTGG+CGG | 0.453463 | 4_1:+1935520 | Msa0528940:CDS |
| GGAAAAGGTGGTGGCATTGG+AGG | 0.454761 | 4_1:+1935787 | Msa0528940:CDS |
| GGAAAAGGTGGTGGCATTGG+AGG | 0.454761 | 4_1:+1936015 | Msa0528940:intron |
| GGTGGTGGAGGCTTTGGAAA+AGG | 0.454832 | 4_1:+1935772 | Msa0528940:CDS |
| GGTCTTGGTGGAGGAGAAGG+AGG | 0.455443 | 4_1:+1936363 | Msa0528940:CDS |
| GGTGGTGGAGGAGGAGCTGG+TGG | 0.456102 | 4_1:+1935253 | Msa0528940:CDS |
| GGTGGAGGACTTGGTGGTGG+CGG | 0.456971 | 4_1:+1935889 | Msa0528940:CDS |
| AAGGGCGGTGGCCTTGGAGG+TGG | 0.457339 | 4_1:+1935670 | Msa0528940:CDS |
| GGCGGCTTCGGAAAGGGTGG+AGG | 0.458617 | 4_1:+1935538 | Msa0528940:CDS |
| CTTGGTGGAGGAGAAGGAGG+TGG | 0.463288 | 4_1:+1936366 | Msa0528940:CDS |
| GGTGTTGGAGGTGGTTCTGG+TGG | 0.463416 | 4_1:+1936099 | Msa0528940:CDS |
| AAAGGTGGTGGCTTTGGAGG+AGG | 0.463440 | 4_1:+1936342 | Msa0528940:CDS |
| GCTGGAGGAGGTTCTGGTGG+TGG | 0.463530 | 4_1:+1936300 | Msa0528940:CDS |
| GGTAAAGGTGGCGGACTTGG+TGG | 0.463847 | 4_1:+1935439 | Msa0528940:intron |
| TCATGGTGGCGGCTTCGGAA+AGG | 0.464252 | 4_1:+1935531 | Msa0528940:CDS |
| GGTGGTGTTGGAGGAGGTGG+TGG | 0.466516 | 4_1:+1936222 | Msa0528940:CDS |
| CATGGAATTGGAGGTGGAGG+AGG | 0.467531 | 4_1:+1935364 | Msa0528940:CDS |
| GGCAAAGGTGGTGGTGTTGG+AGG | 0.467813 | 4_1:+1935625 | Msa0528940:CDS |
| GGTGGCGGAGGCTTTGGAAA+AGG | 0.469442 | 4_1:+1935904 | Msa0528940:CDS |
| GGTGGAGGTCTTGGAGGTGG+TGG | 0.469504 | 4_1:+1935757 | Msa0528940:CDS |
| CTGGTGGTGGTATTGGTGGA+GGG | 0.470066 | 4_1:+1936313 | Msa0528940:CDS |
| GGTGGCATTGGAGGTGGAAT+CGG | 0.470605 | 4_1:+1936024 | Msa0528940:CDS |
| TCGGGTTTGGCAAGGGAGGT+GGG | 0.470823 | 4_1:+1935215 | Msa0528940:CDS |
| GGTGGTGGGATAGGAAAAGG+TGG | 0.471257 | 4_1:+1935457 | Msa0528940:CDS |
| GGCGGACTTGGTGGTGGGAT+AGG | 0.472157 | 4_1:+1935448 | Msa0528940:CDS |
| GGATTTGGTGGTGGTGCAGG+AGG | 0.475924 | 4_1:+1935307 | Msa0528940:CDS |
| AAAGGTGGAGGTCTTGGAGG+TGG | 0.478982 | 4_1:+1935754 | Msa0528940:CDS |
| ATAGGTAAAGGTGGTGGTGG+AGG | 0.479186 | 4_1:+1935694 | Msa0528940:intron |
| TCCAATCCCATGCCCTCCTC+CGG | 0.486383 | 4_1:-1935407 | None:intergenic |
| GGTGGGATAGGAAAAGGTGG+GGG | 0.488751 | 4_1:+1935460 | Msa0528940:CDS |
| GGTGGTGGAATTGGCAAAGG+TGG | 0.490030 | 4_1:+1935871 | Msa0528940:CDS |
| GGAGGTGGAATTGGCAAAGG+TGG | 0.492321 | 4_1:+1935739 | Msa0528940:CDS |
| GGAAAGGGTGGAGGACTTGG+AGG | 0.492612 | 4_1:+1935547 | Msa0528940:CDS |
| GGTGGCTTTGGAAAGGGCGG+TGG | 0.496411 | 4_1:+1935658 | Msa0528940:CDS |
| GGAGGCTTTGGAAAAGGTGG+TGG | 0.496537 | 4_1:+1935844 | Msa0528940:CDS |
| ATTGGAGGTGGAATCGGAAA+AGG | 0.497292 | 4_1:+1935802 | Msa0528940:CDS |
| TCTGGTACTGGAATTGGTGG+TGG | 0.497509 | 4_1:+1936144 | Msa0528940:CDS |
| GGTGGTGGAATTGGCAAAGG+TGG | 0.500627 | 4_1:+1935613 | Msa0528940:CDS |
| GGAGGAGGAGGATTTGGTGG+TGG | 0.502495 | 4_1:+1935298 | Msa0528940:CDS |
| GGCAAAGGTGGAGGTCTTGG+AGG | 0.506372 | 4_1:+1935751 | Msa0528940:CDS |
| GGTGGAATTGGCAAAGGTGG+AGG | 0.506737 | 4_1:+1935742 | Msa0528940:CDS |
| ACTGGAATTGGTGGTGGGAT+CGG | 0.507482 | 4_1:+1936150 | Msa0528940:CDS |
| AAAGGTGGAGGACTTGGTGG+TGG | 0.508439 | 4_1:+1935886 | Msa0528940:CDS |
| GGTATTGGAGGAGGTTCTGG+TGG | 0.508692 | 4_1:+1936069 | Msa0528940:CDS |
| GGCAAAGGTGGAGGACTTGG+TGG | 0.509703 | 4_1:+1935883 | Msa0528940:CDS |
| GGTGGAATCGGTAAAGGTGG+AGG | 0.510092 | 4_1:+1936036 | Msa0528940:CDS |
| ATGGAATTGGAGGTGGAGGA+GGG | 0.513024 | 4_1:+1935365 | Msa0528940:CDS |
| ATTGGAGGTGGAATCGGTAA+AGG | 0.516603 | 4_1:+1936030 | Msa0528940:CDS |
| GGTGCTGGAGGAGGTTCTGG+TGG | 0.518451 | 4_1:+1936297 | Msa0528940:CDS |
| GGTGGAATTGGCAAAGGTGG+AGG | 0.519303 | 4_1:+1935874 | Msa0528940:CDS |
| GGTGGAGGCTTTGGAAAAGG+TGG | 0.520752 | 4_1:+1935841 | Msa0528940:CDS |
| GGTGGCGGCTTCGGAAAGGG+TGG | 0.520942 | 4_1:+1935535 | Msa0528940:CDS |
| GGAGGTGGTGGATTTGGAAA+AGG | 0.521779 | 4_1:+1935490 | Msa0528940:CDS |
| GGCGGCGGACATGGAATTGG+AGG | 0.522774 | 4_1:+1935355 | Msa0528940:CDS |
| GGAAAAGGTGGAGGTCTTGG+TGG | 0.527193 | 4_1:+1935817 | Msa0528940:CDS |
| GGTGGAATCGGAAAAGGTGG+AGG | 0.527886 | 4_1:+1935808 | Msa0528940:CDS |
| AAAGGTGGAGGTCTTGGTGG+TGG | 0.530514 | 4_1:+1935820 | Msa0528940:CDS |
| GTTGGTGGTGGAATTGGCAA+AGG | 0.534826 | 4_1:+1935868 | Msa0528940:CDS |
| GAGGTGCCGGAGGAGGGCAT+GGG | 0.535244 | 4_1:+1935401 | Msa0528940:CDS |
| CTCCCTTGCCAAACCCGACA+AGG | 0.536812 | 4_1:-1935210 | None:intergenic |
| ATTGGTGGAGGGTTCGGCAA+AGG | 0.536995 | 4_1:+1936324 | Msa0528940:CDS |
| CTTGTCGGGTTTGGCAAGGG+AGG | 0.537570 | 4_1:+1935211 | Msa0528940:CDS |
| GGAGGAGGTGGTGGTTCTGG+TGG | 0.538221 | 4_1:+1936231 | Msa0528940:CDS |
| CTTGGTGGTGGGATAGGAAA+AGG | 0.542326 | 4_1:+1935454 | Msa0528940:CDS |
| TGGTGGGATAGGAAAAGGTG+GGG | 0.549531 | 4_1:+1935459 | Msa0528940:CDS |
| GGAGGTGGATTTGGCAAAGG+TGG | 0.550906 | 4_1:+1936261 | Msa0528940:CDS |
| GGTGGTGGATTTGGAAAAGG+TGG | 0.551493 | 4_1:+1935493 | Msa0528940:CDS |
| AAACCTTGTCGGGTTTGGCA+AGG | 0.551905 | 4_1:+1935207 | Msa0528940:CDS |
| AACCTTGTCGGGTTTGGCAA+GGG | 0.553527 | 4_1:+1935208 | Msa0528940:CDS |
| GGTGGAGGGTTCGGCAAAGG+TGG | 0.555099 | 4_1:+1936327 | Msa0528940:CDS |
| GGTATAGGTAAAGGTGGTGG+TGG | 0.555107 | 4_1:+1935691 | Msa0528940:intron |
| TGGGATAGGAAAAGGTGGGG+GGG | 0.557770 | 4_1:+1935462 | Msa0528940:CDS |
| GGTGGCGGTGGAGGTGCCGG+AGG | 0.560515 | 4_1:+1935391 | Msa0528940:CDS |
| GGTAAAGGTGGAGGTTTAGG+TGG | 0.560781 | 4_1:+1936045 | Msa0528940:CDS |
| AAAGGTGGAGGACTTGGAGG+TGG | 0.562037 | 4_1:+1935508 | Msa0528940:CDS |
| AAGGGTGGAGGACTTGGAGG+TGG | 0.562037 | 4_1:+1935550 | Msa0528940:CDS |
| GGTGGATTTGGAAAAGGTGG+AGG | 0.562437 | 4_1:+1935496 | Msa0528940:CDS |
| GTGGTGGGATAGGAAAAGGT+GGG | 0.564333 | 4_1:+1935458 | Msa0528940:CDS |
| GGCGGACATGGAATTGGAGG+TGG | 0.564893 | 4_1:+1935358 | Msa0528940:CDS |
| GGTGGAGGCTTTGGAAAAGG+TGG | 0.567797 | 4_1:+1935775 | Msa0528940:CDS |
| ATAAGAAATGTTTGTACGAG+CGG | 0.570585 | 4_1:+1936542 | Msa0528940:three_prime_UTR |
| AAAGGTGGAGGTTTAGGTGG+TGG | 0.571950 | 4_1:+1936048 | Msa0528940:CDS |
| GGAGGCTTTGGAAAAGGTGG+TGG | 0.580101 | 4_1:+1935778 | Msa0528940:CDS |
| GGACATGGAATTGGAGGTGG+AGG | 0.583217 | 4_1:+1935361 | Msa0528940:CDS |
| ACATTTCTTATATATAGCAC+CGG | 0.590650 | 4_1:-1936530 | None:intergenic |
| GTTGGAGGTGGAATTGGCAA+AGG | 0.591993 | 4_1:+1935736 | Msa0528940:CDS |
| GGTTCTGGTACTGGAATTGG+TGG | 0.592841 | 4_1:+1936141 | Msa0528940:CDS |
| AAGGTGGTGGTGTTGGAGGA+GGG | 0.593059 | 4_1:+1935629 | Msa0528940:CDS |
| AAGGTGGCGGACTTGGTGGT+GGG | 0.594769 | 4_1:+1935443 | Msa0528940:intron |
| GGAGGTGGAATCGGAAAAGG+TGG | 0.604747 | 4_1:+1935805 | Msa0528940:CDS |
| ATTGGAGGTGGATTTGGCAA+AGG | 0.605822 | 4_1:+1936258 | Msa0528940:CDS |
| GGACTTGGAGGTGGTCATGG+TGG | 0.613469 | 4_1:+1935517 | Msa0528940:CDS |
| GGTGGTGGTGGAATTGGCAA+AGG | 0.635926 | 4_1:+1935610 | Msa0528940:CDS |
| GGTGGTATAGGTAAAGGTGG+TGG | 0.638236 | 4_1:+1935688 | Msa0528940:intron |
| GGAGGTGGAATCGGTAAAGG+TGG | 0.659397 | 4_1:+1936033 | Msa0528940:CDS |
| GGTGGTGGCTTTGGAAAGGG+CGG | 0.666290 | 4_1:+1935655 | Msa0528940:CDS |
| GGAGGTGGTATAGGTAAAGG+TGG | 0.669694 | 4_1:+1935685 | Msa0528940:intron |
| CTTTACCTATACCACCTCCA+AGG | 0.671647 | 4_1:-1935681 | None:intergenic |
| ATATTAACGTCGATGCTCAG+TGG | 0.692472 | 4_1:-1936446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTGCATTTTTTATGAAC+CGG | + | chr4_1:1936511-1936530 | Msa0528940:three_prime_UTR | 25.0% |
| ! | ACATTTCTTATATATAGCAC+CGG | - | chr4_1:1936533-1936552 | None:intergenic | 25.0% |
| !!! | AACTTGCATTTTTTATGAAC+CGG | + | chr4_1:1936511-1936530 | Msa0528940:three_prime_UTR | 25.0% |
| ! | ACATTTCTTATATATAGCAC+CGG | - | chr4_1:1936533-1936552 | None:intergenic | 25.0% |
| ATAAGAAATGTTTGTACGAG+CGG | + | chr4_1:1936542-1936561 | Msa0528940:three_prime_UTR | 30.0% | |
| ATAAGAAATGTTTGTACGAG+CGG | + | chr4_1:1936542-1936561 | Msa0528940:three_prime_UTR | 30.0% | |
| GAAGATGAGAAAAACCTTGT+CGG | + | chr4_1:1935196-1935215 | Msa0528940:CDS | 35.0% | |
| AAGATGAGAAAAACCTTGTC+GGG | + | chr4_1:1935197-1935216 | Msa0528940:CDS | 35.0% | |
| GAAGATGAGAAAAACCTTGT+CGG | + | chr4_1:1935196-1935215 | Msa0528940:CDS | 35.0% | |
| AAGATGAGAAAAACCTTGTC+GGG | + | chr4_1:1935197-1935216 | Msa0528940:CDS | 35.0% | |
| ATTGGAAAAGGTGGAGGATT+TGG | + | chr4_1:1935946-1935965 | Msa0528940:intron | 40.0% | |
| AAAGGTGGAGGATTTGGAAA+AGG | + | chr4_1:1935952-1935971 | Msa0528940:intron | 40.0% | |
| !! | AAAGGTTTTGGTGGAGGTAT+TGG | + | chr4_1:1936174-1936193 | Msa0528940:CDS | 40.0% |
| !!! | AAGGTTTTGGTGGAGGTATT+GGG | + | chr4_1:1936175-1936194 | Msa0528940:CDS | 40.0% |
| ATATTAACGTCGATGCTCAG+TGG | - | chr4_1:1936449-1936468 | None:intergenic | 40.0% | |
| !! | CTGAGCATCGACGTTAATAT+TGG | + | chr4_1:1936449-1936468 | Msa0528940:exon | 40.0% |
| ATTGGAAAAGGTGGAGGATT+TGG | + | chr4_1:1935946-1935965 | Msa0528940:intron | 40.0% | |
| AAAGGTGGAGGATTTGGAAA+AGG | + | chr4_1:1935952-1935971 | Msa0528940:intron | 40.0% | |
| !! | AAAGGTTTTGGTGGAGGTAT+TGG | + | chr4_1:1936174-1936193 | Msa0528940:CDS | 40.0% |
| !!! | AAGGTTTTGGTGGAGGTATT+GGG | + | chr4_1:1936175-1936194 | Msa0528940:CDS | 40.0% |
| ATATTAACGTCGATGCTCAG+TGG | - | chr4_1:1936449-1936468 | None:intergenic | 40.0% | |
| !! | CTGAGCATCGACGTTAATAT+TGG | + | chr4_1:1936449-1936468 | Msa0528940:exon | 40.0% |
| GAGAAAAACCTTGTCGGGTT+TGG | + | chr4_1:1935202-1935221 | Msa0528940:CDS | 45.0% | |
| ! | ATTGGAGGTGGGATTGGTAA+AGG | + | chr4_1:1935424-1935443 | Msa0528940:intron | 45.0% |
| TTTGGAAAAGGTGGAGGACT+TGG | + | chr4_1:1935502-1935521 | Msa0528940:CDS | 45.0% | |
| CTTTACCTATACCACCTCCA+AGG | - | chr4_1:1935684-1935703 | None:intergenic | 45.0% | |
| CTTGGAGGTGGTATAGGTAA+AGG | + | chr4_1:1935682-1935701 | Msa0528940:intron | 45.0% | |
| ! | TTTGGAAAAGGTGGTGGCAT+TGG | + | chr4_1:1935784-1935803 | Msa0528940:CDS | 45.0% |
| ATTGGAGGTGGAATCGGAAA+AGG | + | chr4_1:1935802-1935821 | Msa0528940:CDS | 45.0% | |
| ! | TTTGGAAAAGGTGGTGGTGT+TGG | + | chr4_1:1935850-1935869 | Msa0528940:CDS | 45.0% |
| ! | TTTGGAAAAGGTGGTGGTGT+TGG | + | chr4_1:1935850-1935869 | Msa0528940:CDS | 45.0% |
| ! | TTTGGAAAAGGTGGTGGTGT+TGG | + | chr4_1:1935850-1935869 | Msa0528940:CDS | 45.0% |
| !! | AAAGGTGGAGGCTTTGGAAA+AGG | + | chr4_1:1936000-1936019 | Msa0528940:intron | 45.0% |
| ! | TTTGGAAAAGGTGGTGGCAT+TGG | + | chr4_1:1935784-1935803 | Msa0528940:CDS | 45.0% |
| ATTGGAGGTGGAATCGGTAA+AGG | + | chr4_1:1936030-1936049 | Msa0528940:CDS | 45.0% | |
| ATCGGTAAAGGTGGAGGTTT+AGG | + | chr4_1:1936042-1936061 | Msa0528940:CDS | 45.0% | |
| !! | ATCGGAAAAGGTTTTGGTGG+AGG | + | chr4_1:1936168-1936187 | Msa0528940:CDS | 45.0% |
| !!! | AGGTTTTGGTGGAGGTATTG+GGG | + | chr4_1:1936176-1936195 | Msa0528940:CDS | 45.0% |
| ! | ATTGGAGGTGGATTTGGCAA+AGG | + | chr4_1:1936258-1936277 | Msa0528940:CDS | 45.0% |
| ! | TTTGGCAAAGGTGGAGGTTT+TGG | + | chr4_1:1936270-1936289 | Msa0528940:CDS | 45.0% |
| GAGAAAAACCTTGTCGGGTT+TGG | + | chr4_1:1935202-1935221 | Msa0528940:CDS | 45.0% | |
| ! | ATTGGAGGTGGGATTGGTAA+AGG | + | chr4_1:1935424-1935443 | Msa0528940:intron | 45.0% |
| TTTGGAAAAGGTGGAGGACT+TGG | + | chr4_1:1935502-1935521 | Msa0528940:CDS | 45.0% | |
| CTTTACCTATACCACCTCCA+AGG | - | chr4_1:1935684-1935703 | None:intergenic | 45.0% | |
| CTTGGAGGTGGTATAGGTAA+AGG | + | chr4_1:1935682-1935701 | Msa0528940:intron | 45.0% | |
| ! | TTTGGAAAAGGTGGTGGCAT+TGG | + | chr4_1:1935784-1935803 | Msa0528940:CDS | 45.0% |
| ATTGGAGGTGGAATCGGAAA+AGG | + | chr4_1:1935802-1935821 | Msa0528940:CDS | 45.0% | |
| ! | TTTGGAAAAGGTGGTGGTGT+TGG | + | chr4_1:1935850-1935869 | Msa0528940:CDS | 45.0% |
| ! | TTTGGAAAAGGTGGTGGTGT+TGG | + | chr4_1:1935850-1935869 | Msa0528940:CDS | 45.0% |
| ! | TTTGGAAAAGGTGGTGGTGT+TGG | + | chr4_1:1935850-1935869 | Msa0528940:CDS | 45.0% |
| !! | AAAGGTGGAGGCTTTGGAAA+AGG | + | chr4_1:1936000-1936019 | Msa0528940:intron | 45.0% |
| ! | TTTGGAAAAGGTGGTGGCAT+TGG | + | chr4_1:1935784-1935803 | Msa0528940:CDS | 45.0% |
| ATTGGAGGTGGAATCGGTAA+AGG | + | chr4_1:1936030-1936049 | Msa0528940:CDS | 45.0% | |
| ATCGGTAAAGGTGGAGGTTT+AGG | + | chr4_1:1936042-1936061 | Msa0528940:CDS | 45.0% | |
| !! | ATCGGAAAAGGTTTTGGTGG+AGG | + | chr4_1:1936168-1936187 | Msa0528940:CDS | 45.0% |
| !!! | AGGTTTTGGTGGAGGTATTG+GGG | + | chr4_1:1936176-1936195 | Msa0528940:CDS | 45.0% |
| ! | ATTGGAGGTGGATTTGGCAA+AGG | + | chr4_1:1936258-1936277 | Msa0528940:CDS | 45.0% |
| ! | TTTGGCAAAGGTGGAGGTTT+TGG | + | chr4_1:1936270-1936289 | Msa0528940:CDS | 45.0% |
| AAACCTTGTCGGGTTTGGCA+AGG | + | chr4_1:1935207-1935226 | Msa0528940:CDS | 50.0% | |
| AACCTTGTCGGGTTTGGCAA+GGG | + | chr4_1:1935208-1935227 | Msa0528940:CDS | 50.0% | |
| TTTGGTGGAGGAGGAGGATT+TGG | + | chr4_1:1935292-1935311 | Msa0528940:CDS | 50.0% | |
| ATGGAATTGGAGGTGGAGGA+GGG | + | chr4_1:1935365-1935384 | Msa0528940:CDS | 50.0% | |
| !! | ATTGGTAAAGGTGGCGGACT+TGG | + | chr4_1:1935436-1935455 | Msa0528940:intron | 50.0% |
| !! | CTTGGTGGTGGGATAGGAAA+AGG | + | chr4_1:1935454-1935473 | Msa0528940:CDS | 50.0% |
| ! | GTGGTGGGATAGGAAAAGGT+GGG | + | chr4_1:1935458-1935477 | Msa0528940:CDS | 50.0% |
| TGGTGGGATAGGAAAAGGTG+GGG | + | chr4_1:1935459-1935478 | Msa0528940:CDS | 50.0% | |
| !! | GGAGGTGGTGGATTTGGAAA+AGG | + | chr4_1:1935490-1935509 | Msa0528940:CDS | 50.0% |
| !! | GGTGGTGGATTTGGAAAAGG+TGG | + | chr4_1:1935493-1935512 | Msa0528940:CDS | 50.0% |
| ! | GGTGGATTTGGAAAAGGTGG+AGG | + | chr4_1:1935496-1935515 | Msa0528940:CDS | 50.0% |
| ! | ATTGGCAAAGGTGGTGGTGT+TGG | + | chr4_1:1935622-1935641 | Msa0528940:CDS | 50.0% |
| !! | TCAGGTGGTGGCTTTGGAAA+GGG | + | chr4_1:1935652-1935671 | Msa0528940:CDS | 50.0% |
| GGAGGTGGTATAGGTAAAGG+TGG | + | chr4_1:1935685-1935704 | Msa0528940:intron | 50.0% | |
| GGTGGTATAGGTAAAGGTGG+TGG | + | chr4_1:1935688-1935707 | Msa0528940:intron | 50.0% | |
| ! | GGTATAGGTAAAGGTGGTGG+TGG | + | chr4_1:1935691-1935710 | Msa0528940:intron | 50.0% |
| !! | ATAGGTAAAGGTGGTGGTGG+AGG | + | chr4_1:1935694-1935713 | Msa0528940:intron | 50.0% |
| !!! | AAAGGTGGTGGTGGAGGTTT+TGG | + | chr4_1:1935700-1935719 | Msa0528940:CDS | 50.0% |
| !!! | TGGTGGTGGAGGTTTTGGAA+AGG | + | chr4_1:1935705-1935724 | Msa0528940:CDS | 50.0% |
| !!! | GGTGGTGGAGGTTTTGGAAA+GGG | + | chr4_1:1935706-1935725 | Msa0528940:CDS | 50.0% |
| GTTGGAGGTGGAATTGGCAA+AGG | + | chr4_1:1935736-1935755 | Msa0528940:CDS | 50.0% | |
| ATTGGCAAAGGTGGAGGTCT+TGG | + | chr4_1:1935748-1935767 | Msa0528940:CDS | 50.0% | |
| ATCGGAAAAGGTGGAGGTCT+TGG | + | chr4_1:1935814-1935833 | Msa0528940:CDS | 50.0% | |
| !! | GTTGGTGGTGGAATTGGCAA+AGG | + | chr4_1:1935868-1935887 | Msa0528940:CDS | 50.0% |
| ATTGGCAAAGGTGGAGGACT+TGG | + | chr4_1:1935880-1935899 | Msa0528940:CDS | 50.0% | |
| ! | GTTGGAGGTGGCATTGGAAA+AGG | + | chr4_1:1935934-1935953 | Msa0528940:intron | 50.0% |
| GGTGGAGGATTTGGAAAAGG+TGG | + | chr4_1:1935955-1935974 | Msa0528940:intron | 50.0% | |
| GGAGGATTTGGAAAAGGTGG+TGG | + | chr4_1:1935958-1935977 | Msa0528940:intron | 50.0% | |
| ATTGGCAAAGGTGGAGGCTT+TGG | + | chr4_1:1935994-1936013 | Msa0528940:intron | 50.0% | |
| GGTAAAGGTGGAGGTTTAGG+TGG | + | chr4_1:1936045-1936064 | Msa0528940:CDS | 50.0% | |
| AAAGGTGGAGGTTTAGGTGG+TGG | + | chr4_1:1936048-1936067 | Msa0528940:CDS | 50.0% | |
| ! | GGAGGTTTAGGTGGTGGTAT+TGG | + | chr4_1:1936054-1936073 | Msa0528940:CDS | 50.0% |
| ! | GGTTTAGGTGGTGGTATTGG+AGG | + | chr4_1:1936057-1936076 | Msa0528940:CDS | 50.0% |
| ! | TTAGGTGGTGGTATTGGAGG+AGG | + | chr4_1:1936060-1936079 | Msa0528940:CDS | 50.0% |
| ! | GGTTCTGGTACTGGAATTGG+TGG | + | chr4_1:1936141-1936160 | Msa0528940:CDS | 50.0% |
| ! | TCTGGTACTGGAATTGGTGG+TGG | + | chr4_1:1936144-1936163 | Msa0528940:CDS | 50.0% |
| ! | CTGGTACTGGAATTGGTGGT+GGG | + | chr4_1:1936145-1936164 | Msa0528940:CDS | 50.0% |
| !! | ACTGGAATTGGTGGTGGGAT+CGG | + | chr4_1:1936150-1936169 | Msa0528940:CDS | 50.0% |
| !! | ATTGGTGGTGGGATCGGAAA+AGG | + | chr4_1:1936156-1936175 | Msa0528940:CDS | 50.0% |
| ! | GGTGGGATCGGAAAAGGTTT+TGG | + | chr4_1:1936162-1936181 | Msa0528940:CDS | 50.0% |
| !! | GGGATCGGAAAAGGTTTTGG+TGG | + | chr4_1:1936165-1936184 | Msa0528940:CDS | 50.0% |
| !!! | GGTTTTGGTGGAGGTATTGG+GGG | + | chr4_1:1936177-1936196 | Msa0528940:CDS | 50.0% |
| !! | AAAGGTGGAGGTTTTGGTGG+TGG | + | chr4_1:1936276-1936295 | Msa0528940:CDS | 50.0% |
| !!! | AAGGAGGTGGTTTTGGTGGA+GGG | + | chr4_1:1936379-1936398 | Msa0528940:CDS | 50.0% |
| AAACCTTGTCGGGTTTGGCA+AGG | + | chr4_1:1935207-1935226 | Msa0528940:CDS | 50.0% | |
| AACCTTGTCGGGTTTGGCAA+GGG | + | chr4_1:1935208-1935227 | Msa0528940:CDS | 50.0% | |
| TTTGGTGGAGGAGGAGGATT+TGG | + | chr4_1:1935292-1935311 | Msa0528940:CDS | 50.0% | |
| ATGGAATTGGAGGTGGAGGA+GGG | + | chr4_1:1935365-1935384 | Msa0528940:CDS | 50.0% | |
| !! | ATTGGTAAAGGTGGCGGACT+TGG | + | chr4_1:1935436-1935455 | Msa0528940:intron | 50.0% |
| !! | CTTGGTGGTGGGATAGGAAA+AGG | + | chr4_1:1935454-1935473 | Msa0528940:CDS | 50.0% |
| ! | GTGGTGGGATAGGAAAAGGT+GGG | + | chr4_1:1935458-1935477 | Msa0528940:CDS | 50.0% |
| TGGTGGGATAGGAAAAGGTG+GGG | + | chr4_1:1935459-1935478 | Msa0528940:CDS | 50.0% | |
| !! | GGAGGTGGTGGATTTGGAAA+AGG | + | chr4_1:1935490-1935509 | Msa0528940:CDS | 50.0% |
| !! | GGTGGTGGATTTGGAAAAGG+TGG | + | chr4_1:1935493-1935512 | Msa0528940:CDS | 50.0% |
| ! | GGTGGATTTGGAAAAGGTGG+AGG | + | chr4_1:1935496-1935515 | Msa0528940:CDS | 50.0% |
| ! | ATTGGCAAAGGTGGTGGTGT+TGG | + | chr4_1:1935622-1935641 | Msa0528940:CDS | 50.0% |
| !! | TCAGGTGGTGGCTTTGGAAA+GGG | + | chr4_1:1935652-1935671 | Msa0528940:CDS | 50.0% |
| GGAGGTGGTATAGGTAAAGG+TGG | + | chr4_1:1935685-1935704 | Msa0528940:intron | 50.0% | |
| GGTGGTATAGGTAAAGGTGG+TGG | + | chr4_1:1935688-1935707 | Msa0528940:intron | 50.0% | |
| ! | GGTATAGGTAAAGGTGGTGG+TGG | + | chr4_1:1935691-1935710 | Msa0528940:intron | 50.0% |
| !! | ATAGGTAAAGGTGGTGGTGG+AGG | + | chr4_1:1935694-1935713 | Msa0528940:intron | 50.0% |
| !!! | AAAGGTGGTGGTGGAGGTTT+TGG | + | chr4_1:1935700-1935719 | Msa0528940:CDS | 50.0% |
| !!! | TGGTGGTGGAGGTTTTGGAA+AGG | + | chr4_1:1935705-1935724 | Msa0528940:CDS | 50.0% |
| !!! | GGTGGTGGAGGTTTTGGAAA+GGG | + | chr4_1:1935706-1935725 | Msa0528940:CDS | 50.0% |
| GTTGGAGGTGGAATTGGCAA+AGG | + | chr4_1:1935736-1935755 | Msa0528940:CDS | 50.0% | |
| ATTGGCAAAGGTGGAGGTCT+TGG | + | chr4_1:1935748-1935767 | Msa0528940:CDS | 50.0% | |
| ATCGGAAAAGGTGGAGGTCT+TGG | + | chr4_1:1935814-1935833 | Msa0528940:CDS | 50.0% | |
| !! | GTTGGTGGTGGAATTGGCAA+AGG | + | chr4_1:1935868-1935887 | Msa0528940:CDS | 50.0% |
| ATTGGCAAAGGTGGAGGACT+TGG | + | chr4_1:1935880-1935899 | Msa0528940:CDS | 50.0% | |
| ! | GTTGGAGGTGGCATTGGAAA+AGG | + | chr4_1:1935934-1935953 | Msa0528940:intron | 50.0% |
| GGTGGAGGATTTGGAAAAGG+TGG | + | chr4_1:1935955-1935974 | Msa0528940:intron | 50.0% | |
| GGAGGATTTGGAAAAGGTGG+TGG | + | chr4_1:1935958-1935977 | Msa0528940:intron | 50.0% | |
| ATTGGCAAAGGTGGAGGCTT+TGG | + | chr4_1:1935994-1936013 | Msa0528940:intron | 50.0% | |
| GGTAAAGGTGGAGGTTTAGG+TGG | + | chr4_1:1936045-1936064 | Msa0528940:CDS | 50.0% | |
| AAAGGTGGAGGTTTAGGTGG+TGG | + | chr4_1:1936048-1936067 | Msa0528940:CDS | 50.0% | |
| ! | GGAGGTTTAGGTGGTGGTAT+TGG | + | chr4_1:1936054-1936073 | Msa0528940:CDS | 50.0% |
| ! | GGTTTAGGTGGTGGTATTGG+AGG | + | chr4_1:1936057-1936076 | Msa0528940:CDS | 50.0% |
| ! | TTAGGTGGTGGTATTGGAGG+AGG | + | chr4_1:1936060-1936079 | Msa0528940:CDS | 50.0% |
| ! | GGTTCTGGTACTGGAATTGG+TGG | + | chr4_1:1936141-1936160 | Msa0528940:CDS | 50.0% |
| ! | TCTGGTACTGGAATTGGTGG+TGG | + | chr4_1:1936144-1936163 | Msa0528940:CDS | 50.0% |
| ! | CTGGTACTGGAATTGGTGGT+GGG | + | chr4_1:1936145-1936164 | Msa0528940:CDS | 50.0% |
| !! | ACTGGAATTGGTGGTGGGAT+CGG | + | chr4_1:1936150-1936169 | Msa0528940:CDS | 50.0% |
| !! | ATTGGTGGTGGGATCGGAAA+AGG | + | chr4_1:1936156-1936175 | Msa0528940:CDS | 50.0% |
| ! | GGTGGGATCGGAAAAGGTTT+TGG | + | chr4_1:1936162-1936181 | Msa0528940:CDS | 50.0% |
| !! | GGGATCGGAAAAGGTTTTGG+TGG | + | chr4_1:1936165-1936184 | Msa0528940:CDS | 50.0% |
| !!! | GGTTTTGGTGGAGGTATTGG+GGG | + | chr4_1:1936177-1936196 | Msa0528940:CDS | 50.0% |
| !! | AAAGGTGGAGGTTTTGGTGG+TGG | + | chr4_1:1936276-1936295 | Msa0528940:CDS | 50.0% |
| !!! | AAGGAGGTGGTTTTGGTGGA+GGG | + | chr4_1:1936379-1936398 | Msa0528940:CDS | 50.0% |
| ! | TTTGGCAAGGGAGGTGGGTT+TGG | + | chr4_1:1935220-1935239 | Msa0528940:CDS | 55.0% |
| !! | TTTGGAGGTGGGTTTGGTGG+TGG | + | chr4_1:1935238-1935257 | Msa0528940:CDS | 55.0% |
| GGACATGGAATTGGAGGTGG+AGG | + | chr4_1:1935361-1935380 | Msa0528940:CDS | 55.0% | |
| CATGGAATTGGAGGTGGAGG+AGG | + | chr4_1:1935364-1935383 | Msa0528940:CDS | 55.0% | |
| ATTGGAGGTGGAGGAGGGTT+TGG | + | chr4_1:1935370-1935389 | Msa0528940:CDS | 55.0% | |
| CATGGGATTGGAGGTGGGAT+TGG | + | chr4_1:1935418-1935437 | Msa0528940:intron | 55.0% | |
| ! | GGAGGTGGGATTGGTAAAGG+TGG | + | chr4_1:1935427-1935446 | Msa0528940:intron | 55.0% |
| ! | GGTGGGATTGGTAAAGGTGG+CGG | + | chr4_1:1935430-1935449 | Msa0528940:intron | 55.0% |
| !! | GGTGGTGGGATAGGAAAAGG+TGG | + | chr4_1:1935457-1935476 | Msa0528940:CDS | 55.0% |
| GGTGGGATAGGAAAAGGTGG+GGG | + | chr4_1:1935460-1935479 | Msa0528940:CDS | 55.0% | |
| GTGGGATAGGAAAAGGTGGG+GGG | + | chr4_1:1935461-1935480 | Msa0528940:CDS | 55.0% | |
| TGGGATAGGAAAAGGTGGGG+GGG | + | chr4_1:1935462-1935481 | Msa0528940:CDS | 55.0% | |
| GGAAAAGGTGGAGGACTTGG+AGG | + | chr4_1:1935505-1935524 | Msa0528940:CDS | 55.0% | |
| AAAGGTGGAGGACTTGGAGG+TGG | + | chr4_1:1935508-1935527 | Msa0528940:CDS | 55.0% | |
| TTCGGAAAGGGTGGAGGACT+TGG | + | chr4_1:1935544-1935563 | Msa0528940:CDS | 55.0% | |
| GACTTGGAGGTGGTCATGGT+GGG | + | chr4_1:1935518-1935537 | Msa0528940:CDS | 55.0% | |
| ACTTGGAGGTGGTCATGGTG+GGG | + | chr4_1:1935519-1935538 | Msa0528940:CDS | 55.0% | |
| ATTGGCAAAGGTGGGGGGTT+CGG | + | chr4_1:1935586-1935605 | Msa0528940:CDS | 55.0% | |
| !! | TTCGGAGGTGGTGGTGGAAT+TGG | + | chr4_1:1935604-1935623 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGGTGGAATTGGCAA+AGG | + | chr4_1:1935610-1935629 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGGAATTGGCAAAGG+TGG | + | chr4_1:1935613-1935632 | Msa0528940:CDS | 55.0% |
| GGTGGAATTGGCAAAGGTGG+TGG | + | chr4_1:1935616-1935635 | Msa0528940:CDS | 55.0% | |
| ! | AAAGGTGGTGGTGTTGGAGG+AGG | + | chr4_1:1935628-1935647 | Msa0528940:CDS | 55.0% |
| ! | AAGGTGGTGGTGTTGGAGGA+GGG | + | chr4_1:1935629-1935648 | Msa0528940:CDS | 55.0% |
| !! | GTCAGGTGGTGGCTTTGGAA+AGG | + | chr4_1:1935651-1935670 | Msa0528940:CDS | 55.0% |
| !!! | GGTGGAGGTTTTGGAAAGGG+CGG | + | chr4_1:1935709-1935728 | Msa0528940:CDS | 55.0% |
| TTTGGAAAGGGCGGTGGTGT+TGG | + | chr4_1:1935718-1935737 | Msa0528940:CDS | 55.0% | |
| ! | GGTGGTGTTGGAGGTGGAAT+TGG | + | chr4_1:1935730-1935749 | Msa0528940:CDS | 55.0% |
| GGAGGTGGAATTGGCAAAGG+TGG | + | chr4_1:1935739-1935758 | Msa0528940:CDS | 55.0% | |
| GGTGGAATTGGCAAAGGTGG+AGG | + | chr4_1:1935616-1935635 | Msa0528940:CDS | 55.0% | |
| AAAGGTGGAGGTCTTGGAGG+TGG | + | chr4_1:1935754-1935773 | Msa0528940:CDS | 55.0% | |
| !! | GGTGGTGGAGGCTTTGGAAA+AGG | + | chr4_1:1935772-1935791 | Msa0528940:CDS | 55.0% |
| !! | GGTGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935775-1935794 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGCATTGG+AGG | + | chr4_1:1935787-1935806 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGCATTGGAGG+TGG | + | chr4_1:1935790-1935809 | Msa0528940:CDS | 55.0% |
| ! | GGTGGCATTGGAGGTGGAAT+CGG | + | chr4_1:1935796-1935815 | Msa0528940:CDS | 55.0% |
| GGAGGTGGAATCGGAAAAGG+TGG | + | chr4_1:1935805-1935824 | Msa0528940:CDS | 55.0% | |
| GGTGGAATCGGAAAAGGTGG+AGG | + | chr4_1:1935808-1935827 | Msa0528940:CDS | 55.0% | |
| GGAAAAGGTGGAGGTCTTGG+TGG | + | chr4_1:1935817-1935836 | Msa0528940:CDS | 55.0% | |
| AAAGGTGGAGGTCTTGGTGG+TGG | + | chr4_1:1935820-1935839 | Msa0528940:CDS | 55.0% | |
| !! | GGTGGTGGAGGCTTTGGAAA+AGG | + | chr4_1:1935772-1935791 | Msa0528940:CDS | 55.0% |
| !! | GGTGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935775-1935794 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGTGTTGG+TGG | + | chr4_1:1935853-1935872 | Msa0528940:CDS | 55.0% |
| !! | AAAGGTGGTGGTGTTGGTGG+TGG | + | chr4_1:1935856-1935875 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGTTGGTGGTGGAAT+TGG | + | chr4_1:1935862-1935881 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGGAATTGGCAAAGG+TGG | + | chr4_1:1935613-1935632 | Msa0528940:CDS | 55.0% |
| GGTGGAATTGGCAAAGGTGG+AGG | + | chr4_1:1935616-1935635 | Msa0528940:CDS | 55.0% | |
| !! | AAAGGTGGAGGACTTGGTGG+TGG | + | chr4_1:1935886-1935905 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGTGTTGG+AGG | + | chr4_1:1935853-1935872 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGTGTTGGAGG+TGG | + | chr4_1:1935628-1935647 | Msa0528940:CDS | 55.0% |
| ! | GGAGGTGGCATTGGAAAAGG+TGG | + | chr4_1:1935937-1935956 | Msa0528940:intron | 55.0% |
| ! | GGTGGCATTGGAAAAGGTGG+AGG | + | chr4_1:1935940-1935959 | Msa0528940:intron | 55.0% |
| ! | GGAAAAGGTGGTGGTGTTGG+AGG | + | chr4_1:1935853-1935872 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGTGTTGGAGG+TGG | + | chr4_1:1935628-1935647 | Msa0528940:CDS | 55.0% |
| ! | AAGGTGGTGGTGTTGGAGGT+GGG | + | chr4_1:1935923-1935942 | Msa0528940:intron | 55.0% |
| ! | GTTGGAGGTGGGATTGGCAA+AGG | + | chr4_1:1935982-1936001 | Msa0528940:intron | 55.0% |
| !! | GGTGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935775-1935794 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGCATTGG+AGG | + | chr4_1:1935787-1935806 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGCATTGGAGG+TGG | + | chr4_1:1935790-1935809 | Msa0528940:CDS | 55.0% |
| ! | GGTGGCATTGGAGGTGGAAT+CGG | + | chr4_1:1935796-1935815 | Msa0528940:CDS | 55.0% |
| GGAGGTGGAATCGGTAAAGG+TGG | + | chr4_1:1936033-1936052 | Msa0528940:CDS | 55.0% | |
| GGTGGAATCGGTAAAGGTGG+AGG | + | chr4_1:1936036-1936055 | Msa0528940:CDS | 55.0% | |
| ! | GGTGGTATTGGAGGAGGTTC+TGG | + | chr4_1:1936066-1936085 | Msa0528940:CDS | 55.0% |
| ! | GGTATTGGAGGAGGTTCTGG+TGG | + | chr4_1:1936069-1936088 | Msa0528940:CDS | 55.0% |
| ! | ATTGGAGGAGGTTCTGGTGG+AGG | + | chr4_1:1936072-1936091 | Msa0528940:CDS | 55.0% |
| !! | TCTGGTGGAGGTGGTGGTTT+TGG | + | chr4_1:1936114-1936133 | Msa0528940:CDS | 55.0% |
| ! | TTTGGAGGCGGTTCTGGTAC+TGG | + | chr4_1:1936132-1936151 | Msa0528940:CDS | 55.0% |
| ! | GGCGGTTCTGGTACTGGAAT+TGG | + | chr4_1:1936138-1936157 | Msa0528940:CDS | 55.0% |
| !! | TTTGGTGGAGGTATTGGGGG+TGG | + | chr4_1:1936180-1936199 | Msa0528940:CDS | 55.0% |
| ! | GGTGGTTCAGGTGGAGGTTT+TGG | + | chr4_1:1936198-1936217 | Msa0528940:CDS | 55.0% |
| !! | GGTTCAGGTGGAGGTTTTGG+CGG | + | chr4_1:1936201-1936220 | Msa0528940:CDS | 55.0% |
| ! | GGAGGTGGATTTGGCAAAGG+TGG | + | chr4_1:1936261-1936280 | Msa0528940:CDS | 55.0% |
| ! | GGTGGATTTGGCAAAGGTGG+AGG | + | chr4_1:1936264-1936283 | Msa0528940:CDS | 55.0% |
| !! | GGCAAAGGTGGAGGTTTTGG+TGG | + | chr4_1:1936273-1936292 | Msa0528940:CDS | 55.0% |
| !! | GGAGGTTCTGGTGGTGGTAT+TGG | + | chr4_1:1936306-1936325 | Msa0528940:CDS | 55.0% |
| !! | GGTTCTGGTGGTGGTATTGG+TGG | + | chr4_1:1936309-1936328 | Msa0528940:CDS | 55.0% |
| !! | TCTGGTGGTGGTATTGGTGG+AGG | + | chr4_1:1936312-1936331 | Msa0528940:CDS | 55.0% |
| !! | CTGGTGGTGGTATTGGTGGA+GGG | + | chr4_1:1936313-1936332 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTATTGGTGGAGGGTT+CGG | + | chr4_1:1936318-1936337 | Msa0528940:CDS | 55.0% |
| ATTGGTGGAGGGTTCGGCAA+AGG | + | chr4_1:1936324-1936343 | Msa0528940:CDS | 55.0% | |
| ! | TTCGGCAAAGGTGGTGGCTT+TGG | + | chr4_1:1936336-1936355 | Msa0528940:CDS | 55.0% |
| !! | AAAGGTGGTGGCTTTGGAGG+AGG | + | chr4_1:1936342-1936361 | Msa0528940:CDS | 55.0% |
| TTTGGAGGAGGTCTTGGTGG+AGG | + | chr4_1:1936354-1936373 | Msa0528940:CDS | 55.0% | |
| ! | GGAGGAGAAGGAGGTGGTTT+TGG | + | chr4_1:1936372-1936391 | Msa0528940:CDS | 55.0% |
| !!! | GGAGAAGGAGGTGGTTTTGG+TGG | + | chr4_1:1936375-1936394 | Msa0528940:CDS | 55.0% |
| !!! | GAAGGAGGTGGTTTTGGTGG+AGG | + | chr4_1:1936378-1936397 | Msa0528940:CDS | 55.0% |
| !!! | GGTGGTTTTGGTGGAGGGTT+TGG | + | chr4_1:1936384-1936403 | Msa0528940:CDS | 55.0% |
| !! | GGTTTTGGTGGAGGGTTTGG+TGG | + | chr4_1:1936387-1936406 | Msa0528940:CDS | 55.0% |
| !! | TTTGGTGGAGGGTTTGGTGG+CGG | + | chr4_1:1936390-1936409 | Msa0528940:CDS | 55.0% |
| ! | TTTGGCAAGGGAGGTGGGTT+TGG | + | chr4_1:1935220-1935239 | Msa0528940:CDS | 55.0% |
| !! | TTTGGAGGTGGGTTTGGTGG+TGG | + | chr4_1:1935238-1935257 | Msa0528940:CDS | 55.0% |
| GGACATGGAATTGGAGGTGG+AGG | + | chr4_1:1935361-1935380 | Msa0528940:CDS | 55.0% | |
| CATGGAATTGGAGGTGGAGG+AGG | + | chr4_1:1935364-1935383 | Msa0528940:CDS | 55.0% | |
| ATTGGAGGTGGAGGAGGGTT+TGG | + | chr4_1:1935370-1935389 | Msa0528940:CDS | 55.0% | |
| CATGGGATTGGAGGTGGGAT+TGG | + | chr4_1:1935418-1935437 | Msa0528940:intron | 55.0% | |
| ! | GGAGGTGGGATTGGTAAAGG+TGG | + | chr4_1:1935427-1935446 | Msa0528940:intron | 55.0% |
| ! | GGTGGGATTGGTAAAGGTGG+CGG | + | chr4_1:1935430-1935449 | Msa0528940:intron | 55.0% |
| !! | GGTGGTGGGATAGGAAAAGG+TGG | + | chr4_1:1935457-1935476 | Msa0528940:CDS | 55.0% |
| GGTGGGATAGGAAAAGGTGG+GGG | + | chr4_1:1935460-1935479 | Msa0528940:CDS | 55.0% | |
| GTGGGATAGGAAAAGGTGGG+GGG | + | chr4_1:1935461-1935480 | Msa0528940:CDS | 55.0% | |
| TGGGATAGGAAAAGGTGGGG+GGG | + | chr4_1:1935462-1935481 | Msa0528940:CDS | 55.0% | |
| GGAAAAGGTGGAGGACTTGG+AGG | + | chr4_1:1935505-1935524 | Msa0528940:CDS | 55.0% | |
| AAAGGTGGAGGACTTGGAGG+TGG | + | chr4_1:1935508-1935527 | Msa0528940:CDS | 55.0% | |
| TTCGGAAAGGGTGGAGGACT+TGG | + | chr4_1:1935544-1935563 | Msa0528940:CDS | 55.0% | |
| GACTTGGAGGTGGTCATGGT+GGG | + | chr4_1:1935518-1935537 | Msa0528940:CDS | 55.0% | |
| ACTTGGAGGTGGTCATGGTG+GGG | + | chr4_1:1935519-1935538 | Msa0528940:CDS | 55.0% | |
| ATTGGCAAAGGTGGGGGGTT+CGG | + | chr4_1:1935586-1935605 | Msa0528940:CDS | 55.0% | |
| !! | TTCGGAGGTGGTGGTGGAAT+TGG | + | chr4_1:1935604-1935623 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGGTGGAATTGGCAA+AGG | + | chr4_1:1935610-1935629 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGGAATTGGCAAAGG+TGG | + | chr4_1:1935613-1935632 | Msa0528940:CDS | 55.0% |
| GGTGGAATTGGCAAAGGTGG+TGG | + | chr4_1:1935616-1935635 | Msa0528940:CDS | 55.0% | |
| ! | AAAGGTGGTGGTGTTGGAGG+AGG | + | chr4_1:1935628-1935647 | Msa0528940:CDS | 55.0% |
| ! | AAGGTGGTGGTGTTGGAGGA+GGG | + | chr4_1:1935629-1935648 | Msa0528940:CDS | 55.0% |
| !! | GTCAGGTGGTGGCTTTGGAA+AGG | + | chr4_1:1935651-1935670 | Msa0528940:CDS | 55.0% |
| !!! | GGTGGAGGTTTTGGAAAGGG+CGG | + | chr4_1:1935709-1935728 | Msa0528940:CDS | 55.0% |
| TTTGGAAAGGGCGGTGGTGT+TGG | + | chr4_1:1935718-1935737 | Msa0528940:CDS | 55.0% | |
| ! | GGTGGTGTTGGAGGTGGAAT+TGG | + | chr4_1:1935730-1935749 | Msa0528940:CDS | 55.0% |
| GGAGGTGGAATTGGCAAAGG+TGG | + | chr4_1:1935739-1935758 | Msa0528940:CDS | 55.0% | |
| GGTGGAATTGGCAAAGGTGG+AGG | + | chr4_1:1935616-1935635 | Msa0528940:CDS | 55.0% | |
| AAAGGTGGAGGTCTTGGAGG+TGG | + | chr4_1:1935754-1935773 | Msa0528940:CDS | 55.0% | |
| !! | GGTGGTGGAGGCTTTGGAAA+AGG | + | chr4_1:1935772-1935791 | Msa0528940:CDS | 55.0% |
| !! | GGTGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935775-1935794 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGCATTGG+AGG | + | chr4_1:1935787-1935806 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGCATTGGAGG+TGG | + | chr4_1:1935790-1935809 | Msa0528940:CDS | 55.0% |
| ! | GGTGGCATTGGAGGTGGAAT+CGG | + | chr4_1:1935796-1935815 | Msa0528940:CDS | 55.0% |
| GGAGGTGGAATCGGAAAAGG+TGG | + | chr4_1:1935805-1935824 | Msa0528940:CDS | 55.0% | |
| GGTGGAATCGGAAAAGGTGG+AGG | + | chr4_1:1935808-1935827 | Msa0528940:CDS | 55.0% | |
| GGAAAAGGTGGAGGTCTTGG+TGG | + | chr4_1:1935817-1935836 | Msa0528940:CDS | 55.0% | |
| AAAGGTGGAGGTCTTGGTGG+TGG | + | chr4_1:1935820-1935839 | Msa0528940:CDS | 55.0% | |
| !! | GGTGGTGGAGGCTTTGGAAA+AGG | + | chr4_1:1935772-1935791 | Msa0528940:CDS | 55.0% |
| !! | GGTGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935775-1935794 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGTGTTGG+TGG | + | chr4_1:1935853-1935872 | Msa0528940:CDS | 55.0% |
| !! | AAAGGTGGTGGTGTTGGTGG+TGG | + | chr4_1:1935856-1935875 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGTTGGTGGTGGAAT+TGG | + | chr4_1:1935862-1935881 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTGGAATTGGCAAAGG+TGG | + | chr4_1:1935613-1935632 | Msa0528940:CDS | 55.0% |
| GGTGGAATTGGCAAAGGTGG+AGG | + | chr4_1:1935616-1935635 | Msa0528940:CDS | 55.0% | |
| !! | AAAGGTGGAGGACTTGGTGG+TGG | + | chr4_1:1935886-1935905 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGTGTTGG+AGG | + | chr4_1:1935853-1935872 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGTGTTGGAGG+TGG | + | chr4_1:1935628-1935647 | Msa0528940:CDS | 55.0% |
| ! | GGAGGTGGCATTGGAAAAGG+TGG | + | chr4_1:1935937-1935956 | Msa0528940:intron | 55.0% |
| ! | GGTGGCATTGGAAAAGGTGG+AGG | + | chr4_1:1935940-1935959 | Msa0528940:intron | 55.0% |
| ! | GGAAAAGGTGGTGGTGTTGG+AGG | + | chr4_1:1935853-1935872 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGTGTTGGAGG+TGG | + | chr4_1:1935628-1935647 | Msa0528940:CDS | 55.0% |
| ! | AAGGTGGTGGTGTTGGAGGT+GGG | + | chr4_1:1935923-1935942 | Msa0528940:intron | 55.0% |
| ! | GTTGGAGGTGGGATTGGCAA+AGG | + | chr4_1:1935982-1936001 | Msa0528940:intron | 55.0% |
| !! | GGTGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935775-1935794 | Msa0528940:CDS | 55.0% |
| !! | GGAGGCTTTGGAAAAGGTGG+TGG | + | chr4_1:1935778-1935797 | Msa0528940:CDS | 55.0% |
| ! | GGAAAAGGTGGTGGCATTGG+AGG | + | chr4_1:1935787-1935806 | Msa0528940:CDS | 55.0% |
| ! | AAAGGTGGTGGCATTGGAGG+TGG | + | chr4_1:1935790-1935809 | Msa0528940:CDS | 55.0% |
| ! | GGTGGCATTGGAGGTGGAAT+CGG | + | chr4_1:1935796-1935815 | Msa0528940:CDS | 55.0% |
| GGAGGTGGAATCGGTAAAGG+TGG | + | chr4_1:1936033-1936052 | Msa0528940:CDS | 55.0% | |
| GGTGGAATCGGTAAAGGTGG+AGG | + | chr4_1:1936036-1936055 | Msa0528940:CDS | 55.0% | |
| ! | GGTGGTATTGGAGGAGGTTC+TGG | + | chr4_1:1936066-1936085 | Msa0528940:CDS | 55.0% |
| ! | GGTATTGGAGGAGGTTCTGG+TGG | + | chr4_1:1936069-1936088 | Msa0528940:CDS | 55.0% |
| ! | ATTGGAGGAGGTTCTGGTGG+AGG | + | chr4_1:1936072-1936091 | Msa0528940:CDS | 55.0% |
| !! | TCTGGTGGAGGTGGTGGTTT+TGG | + | chr4_1:1936114-1936133 | Msa0528940:CDS | 55.0% |
| ! | TTTGGAGGCGGTTCTGGTAC+TGG | + | chr4_1:1936132-1936151 | Msa0528940:CDS | 55.0% |
| ! | GGCGGTTCTGGTACTGGAAT+TGG | + | chr4_1:1936138-1936157 | Msa0528940:CDS | 55.0% |
| !! | TTTGGTGGAGGTATTGGGGG+TGG | + | chr4_1:1936180-1936199 | Msa0528940:CDS | 55.0% |
| ! | GGTGGTTCAGGTGGAGGTTT+TGG | + | chr4_1:1936198-1936217 | Msa0528940:CDS | 55.0% |
| !! | GGTTCAGGTGGAGGTTTTGG+CGG | + | chr4_1:1936201-1936220 | Msa0528940:CDS | 55.0% |
| ! | GGAGGTGGATTTGGCAAAGG+TGG | + | chr4_1:1936261-1936280 | Msa0528940:CDS | 55.0% |
| ! | GGTGGATTTGGCAAAGGTGG+AGG | + | chr4_1:1936264-1936283 | Msa0528940:CDS | 55.0% |
| !! | GGCAAAGGTGGAGGTTTTGG+TGG | + | chr4_1:1936273-1936292 | Msa0528940:CDS | 55.0% |
| !! | GGAGGTTCTGGTGGTGGTAT+TGG | + | chr4_1:1936306-1936325 | Msa0528940:CDS | 55.0% |
| !! | GGTTCTGGTGGTGGTATTGG+TGG | + | chr4_1:1936309-1936328 | Msa0528940:CDS | 55.0% |
| !! | TCTGGTGGTGGTATTGGTGG+AGG | + | chr4_1:1936312-1936331 | Msa0528940:CDS | 55.0% |
| !! | CTGGTGGTGGTATTGGTGGA+GGG | + | chr4_1:1936313-1936332 | Msa0528940:CDS | 55.0% |
| !! | GGTGGTATTGGTGGAGGGTT+CGG | + | chr4_1:1936318-1936337 | Msa0528940:CDS | 55.0% |
| ATTGGTGGAGGGTTCGGCAA+AGG | + | chr4_1:1936324-1936343 | Msa0528940:CDS | 55.0% | |
| ! | TTCGGCAAAGGTGGTGGCTT+TGG | + | chr4_1:1936336-1936355 | Msa0528940:CDS | 55.0% |
| !! | AAAGGTGGTGGCTTTGGAGG+AGG | + | chr4_1:1936342-1936361 | Msa0528940:CDS | 55.0% |
| TTTGGAGGAGGTCTTGGTGG+AGG | + | chr4_1:1936354-1936373 | Msa0528940:CDS | 55.0% | |
| ! | GGAGGAGAAGGAGGTGGTTT+TGG | + | chr4_1:1936372-1936391 | Msa0528940:CDS | 55.0% |
| !!! | GGAGAAGGAGGTGGTTTTGG+TGG | + | chr4_1:1936375-1936394 | Msa0528940:CDS | 55.0% |
| !!! | GAAGGAGGTGGTTTTGGTGG+AGG | + | chr4_1:1936378-1936397 | Msa0528940:CDS | 55.0% |
| !!! | GGTGGTTTTGGTGGAGGGTT+TGG | + | chr4_1:1936384-1936403 | Msa0528940:CDS | 55.0% |
| !! | GGTTTTGGTGGAGGGTTTGG+TGG | + | chr4_1:1936387-1936406 | Msa0528940:CDS | 55.0% |
| !! | TTTGGTGGAGGGTTTGGTGG+CGG | + | chr4_1:1936390-1936409 | Msa0528940:CDS | 55.0% |
| CTCCCTTGCCAAACCCGACA+AGG | - | chr4_1:1935213-1935232 | None:intergenic | 60.0% | |
| CTTGTCGGGTTTGGCAAGGG+AGG | + | chr4_1:1935211-1935230 | Msa0528940:CDS | 60.0% | |
| TCGGGTTTGGCAAGGGAGGT+GGG | + | chr4_1:1935215-1935234 | Msa0528940:CDS | 60.0% | |
| ! | AAGGGAGGTGGGTTTGGAGG+TGG | + | chr4_1:1935226-1935245 | Msa0528940:CDS | 60.0% |
| ! | AGGGAGGTGGGTTTGGAGGT+GGG | + | chr4_1:1935227-1935246 | Msa0528940:CDS | 60.0% |
| ! | GGTGGGTTTGGAGGTGGGTT+TGG | + | chr4_1:1935232-1935251 | Msa0528940:CDS | 60.0% |
| ! | GGGTTTGGAGGTGGGTTTGG+TGG | + | chr4_1:1935235-1935254 | Msa0528940:CDS | 60.0% |
| !! | TTTGGTGGTGGAGGAGGAGC+TGG | + | chr4_1:1935250-1935269 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGTGGTTTTGGTGGAGG+AGG | + | chr4_1:1935283-1935302 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGTTTTGGTGGAGGAGG+AGG | + | chr4_1:1935286-1935305 | Msa0528940:CDS | 60.0% |
| GGTGGAGGAGGAGGATTTGG+TGG | + | chr4_1:1935295-1935314 | Msa0528940:CDS | 60.0% | |
| !! | GGAGGAGGAGGATTTGGTGG+TGG | + | chr4_1:1935298-1935317 | Msa0528940:CDS | 60.0% |
| !! | GGAGGATTTGGTGGTGGTGC+AGG | + | chr4_1:1935304-1935323 | Msa0528940:CDS | 60.0% |
| !! | GGATTTGGTGGTGGTGCAGG+AGG | + | chr4_1:1935307-1935326 | Msa0528940:CDS | 60.0% |
| !! | TTTGGTGGTGGTGCAGGAGG+TGG | + | chr4_1:1935310-1935329 | Msa0528940:CDS | 60.0% |
| GGCGGACATGGAATTGGAGG+TGG | + | chr4_1:1935358-1935377 | Msa0528940:CDS | 60.0% | |
| TCCAATCCCATGCCCTCCTC+CGG | - | chr4_1:1935410-1935429 | None:intergenic | 60.0% | |
| ! | GAGGGCATGGGATTGGAGGT+GGG | + | chr4_1:1935413-1935432 | Msa0528940:intron | 60.0% |
| !! | GGTAAAGGTGGCGGACTTGG+TGG | + | chr4_1:1935439-1935458 | Msa0528940:intron | 60.0% |
| !! | AAAGGTGGCGGACTTGGTGG+TGG | + | chr4_1:1935442-1935461 | Msa0528940:intron | 60.0% |
| !! | AAGGTGGCGGACTTGGTGGT+GGG | + | chr4_1:1935443-1935462 | Msa0528940:intron | 60.0% |
| ATAGGAAAAGGTGGGGGGGC+TGG | + | chr4_1:1935466-1935485 | Msa0528940:CDS | 60.0% | |
| !! | GCTGGTGGAGGTGGTGGATT+TGG | + | chr4_1:1935484-1935503 | Msa0528940:CDS | 60.0% |
| GGAGGACTTGGAGGTGGTCA+TGG | + | chr4_1:1935514-1935533 | Msa0528940:CDS | 60.0% | |
| GGACTTGGAGGTGGTCATGG+TGG | + | chr4_1:1935517-1935536 | Msa0528940:CDS | 60.0% | |
| CTTGGAGGTGGTCATGGTGG+CGG | + | chr4_1:1935520-1935539 | Msa0528940:CDS | 60.0% | |
| !! | TCATGGTGGCGGCTTCGGAA+AGG | + | chr4_1:1935531-1935550 | Msa0528940:CDS | 60.0% |
| !! | CATGGTGGCGGCTTCGGAAA+GGG | + | chr4_1:1935532-1935551 | Msa0528940:CDS | 60.0% |
| GGAAAGGGTGGAGGACTTGG+AGG | + | chr4_1:1935547-1935566 | Msa0528940:CDS | 60.0% | |
| AAGGGTGGAGGACTTGGAGG+TGG | + | chr4_1:1935550-1935569 | Msa0528940:CDS | 60.0% | |
| GGAGGACTTGGAGGTGGTCA+TGG | + | chr4_1:1935514-1935533 | Msa0528940:CDS | 60.0% | |
| GGACTTGGAGGTGGTCATGG+TGG | + | chr4_1:1935517-1935536 | Msa0528940:CDS | 60.0% | |
| CTTGGAGGTGGTCATGGTGG+GGG | + | chr4_1:1935520-1935539 | Msa0528940:CDS | 60.0% | |
| !! | CATGGTGGGGGCATTGGCAA+AGG | + | chr4_1:1935574-1935593 | Msa0528940:CDS | 60.0% |
| !! | GTGGGGGCATTGGCAAAGGT+GGG | + | chr4_1:1935578-1935597 | Msa0528940:CDS | 60.0% |
| !! | TGGGGGCATTGGCAAAGGTG+GGG | + | chr4_1:1935579-1935598 | Msa0528940:CDS | 60.0% |
| ! | GGCAAAGGTGGTGGTGTTGG+AGG | + | chr4_1:1935625-1935644 | Msa0528940:CDS | 60.0% |
| !! | GGTGGTGGCTTTGGAAAGGG+CGG | + | chr4_1:1935655-1935674 | Msa0528940:CDS | 60.0% |
| TTTGGAAAGGGCGGTGGCCT+TGG | + | chr4_1:1935664-1935683 | Msa0528940:CDS | 60.0% | |
| ! | GGTGGCCTTGGAGGTGGTAT+AGG | + | chr4_1:1935676-1935695 | Msa0528940:intron | 60.0% |
| !!! | GGAGGTTTTGGAAAGGGCGG+TGG | + | chr4_1:1935712-1935731 | Msa0528940:CDS | 60.0% |
| GGCAAAGGTGGAGGTCTTGG+AGG | + | chr4_1:1935751-1935770 | Msa0528940:CDS | 60.0% | |
| !! | CTTGGAGGTGGTGGAGGCTT+TGG | + | chr4_1:1935766-1935785 | Msa0528940:CDS | 60.0% |
| !! | CTTGGTGGTGGTGGAGGCTT+TGG | + | chr4_1:1935832-1935851 | Msa0528940:CDS | 60.0% |
| GGCAAAGGTGGAGGACTTGG+TGG | + | chr4_1:1935883-1935902 | Msa0528940:CDS | 60.0% | |
| !! | GGTGGCGGAGGCTTTGGAAA+AGG | + | chr4_1:1935904-1935923 | Msa0528940:CDS | 60.0% |
| !! | GGCGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935907-1935926 | Msa0528940:intron | 60.0% |
| ! | GGTGGTGTTGGAGGTGGCAT+TGG | + | chr4_1:1935928-1935947 | Msa0528940:intron | 60.0% |
| ! | GGTGGTGTTGGAGGTGGGAT+TGG | + | chr4_1:1935976-1935995 | Msa0528940:intron | 60.0% |
| ! | GGAGGTGGGATTGGCAAAGG+TGG | + | chr4_1:1935985-1936004 | Msa0528940:intron | 60.0% |
| ! | GGTGGGATTGGCAAAGGTGG+AGG | + | chr4_1:1935988-1936007 | Msa0528940:intron | 60.0% |
| ! | TCTGGTGGAGGTGGTGGTGT+TGG | + | chr4_1:1936084-1936103 | Msa0528940:CDS | 60.0% |
| ! | GGTGGTGTTGGAGGTGGTTC+TGG | + | chr4_1:1936096-1936115 | Msa0528940:CDS | 60.0% |
| !! | GGTGTTGGAGGTGGTTCTGG+TGG | + | chr4_1:1936099-1936118 | Msa0528940:CDS | 60.0% |
| !! | GTTGGAGGTGGTTCTGGTGG+AGG | + | chr4_1:1936102-1936121 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGAGGTGGTGGTTTTGG+AGG | + | chr4_1:1936117-1936136 | Msa0528940:CDS | 60.0% |
| !!! | GGAGGTGGTGGTTTTGGAGG+CGG | + | chr4_1:1936120-1936139 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGTTTTGGAGGCGGTTC+TGG | + | chr4_1:1936126-1936145 | Msa0528940:CDS | 60.0% |
| !! | GGAGGTATTGGGGGTGGTTC+AGG | + | chr4_1:1936186-1936205 | Msa0528940:CDS | 60.0% |
| ! | GGTATTGGGGGTGGTTCAGG+TGG | + | chr4_1:1936189-1936208 | Msa0528940:CDS | 60.0% |
| ATTGGGGGTGGTTCAGGTGG+AGG | + | chr4_1:1936192-1936211 | Msa0528940:CDS | 60.0% | |
| !! | TCAGGTGGAGGTTTTGGCGG+TGG | + | chr4_1:1936204-1936223 | Msa0528940:CDS | 60.0% |
| !! | GGAGGTTTTGGCGGTGGTGT+TGG | + | chr4_1:1936210-1936229 | Msa0528940:CDS | 60.0% |
| !! | GGTTTTGGCGGTGGTGTTGG+AGG | + | chr4_1:1936213-1936232 | Msa0528940:CDS | 60.0% |
| ! | TTTGGCGGTGGTGTTGGAGG+AGG | + | chr4_1:1936216-1936235 | Msa0528940:CDS | 60.0% |
| ! | GTTGGAGGAGGTGGTGGTTC+TGG | + | chr4_1:1936228-1936247 | Msa0528940:CDS | 60.0% |
| ! | GGCGGCATTGGAGGTGGATT+TGG | + | chr4_1:1936252-1936271 | Msa0528940:CDS | 60.0% |
| !!! | GGAGGTTTTGGTGGTGGTGC+TGG | + | chr4_1:1936282-1936301 | Msa0528940:CDS | 60.0% |
| !!! | GGTTTTGGTGGTGGTGCTGG+AGG | + | chr4_1:1936285-1936304 | Msa0528940:CDS | 60.0% |
| !! | TTTGGTGGTGGTGCTGGAGG+AGG | + | chr4_1:1936288-1936307 | Msa0528940:CDS | 60.0% |
| !! | GGCAAAGGTGGTGGCTTTGG+AGG | + | chr4_1:1936339-1936358 | Msa0528940:CDS | 60.0% |
| !! | GGTGGCTTTGGAGGAGGTCT+TGG | + | chr4_1:1936348-1936367 | Msa0528940:CDS | 60.0% |
| !! | GGCTTTGGAGGAGGTCTTGG+TGG | + | chr4_1:1936351-1936370 | Msa0528940:CDS | 60.0% |
| GGAGGTCTTGGTGGAGGAGA+AGG | + | chr4_1:1936360-1936379 | Msa0528940:CDS | 60.0% | |
| GGTCTTGGTGGAGGAGAAGG+AGG | + | chr4_1:1936363-1936382 | Msa0528940:CDS | 60.0% | |
| CTTGGTGGAGGAGAAGGAGG+TGG | + | chr4_1:1936366-1936385 | Msa0528940:CDS | 60.0% | |
| CTCCCTTGCCAAACCCGACA+AGG | - | chr4_1:1935213-1935232 | None:intergenic | 60.0% | |
| CTTGTCGGGTTTGGCAAGGG+AGG | + | chr4_1:1935211-1935230 | Msa0528940:CDS | 60.0% | |
| TCGGGTTTGGCAAGGGAGGT+GGG | + | chr4_1:1935215-1935234 | Msa0528940:CDS | 60.0% | |
| ! | AAGGGAGGTGGGTTTGGAGG+TGG | + | chr4_1:1935226-1935245 | Msa0528940:CDS | 60.0% |
| ! | AGGGAGGTGGGTTTGGAGGT+GGG | + | chr4_1:1935227-1935246 | Msa0528940:CDS | 60.0% |
| ! | GGTGGGTTTGGAGGTGGGTT+TGG | + | chr4_1:1935232-1935251 | Msa0528940:CDS | 60.0% |
| ! | GGGTTTGGAGGTGGGTTTGG+TGG | + | chr4_1:1935235-1935254 | Msa0528940:CDS | 60.0% |
| !! | TTTGGTGGTGGAGGAGGAGC+TGG | + | chr4_1:1935250-1935269 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGTGGTTTTGGTGGAGG+AGG | + | chr4_1:1935283-1935302 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGTTTTGGTGGAGGAGG+AGG | + | chr4_1:1935286-1935305 | Msa0528940:CDS | 60.0% |
| GGTGGAGGAGGAGGATTTGG+TGG | + | chr4_1:1935295-1935314 | Msa0528940:CDS | 60.0% | |
| !! | GGAGGAGGAGGATTTGGTGG+TGG | + | chr4_1:1935298-1935317 | Msa0528940:CDS | 60.0% |
| !! | GGAGGATTTGGTGGTGGTGC+AGG | + | chr4_1:1935304-1935323 | Msa0528940:CDS | 60.0% |
| !! | GGATTTGGTGGTGGTGCAGG+AGG | + | chr4_1:1935307-1935326 | Msa0528940:CDS | 60.0% |
| !! | TTTGGTGGTGGTGCAGGAGG+TGG | + | chr4_1:1935310-1935329 | Msa0528940:CDS | 60.0% |
| GGCGGACATGGAATTGGAGG+TGG | + | chr4_1:1935358-1935377 | Msa0528940:CDS | 60.0% | |
| TCCAATCCCATGCCCTCCTC+CGG | - | chr4_1:1935410-1935429 | None:intergenic | 60.0% | |
| ! | GAGGGCATGGGATTGGAGGT+GGG | + | chr4_1:1935413-1935432 | Msa0528940:intron | 60.0% |
| !! | GGTAAAGGTGGCGGACTTGG+TGG | + | chr4_1:1935439-1935458 | Msa0528940:intron | 60.0% |
| !! | AAAGGTGGCGGACTTGGTGG+TGG | + | chr4_1:1935442-1935461 | Msa0528940:intron | 60.0% |
| !! | AAGGTGGCGGACTTGGTGGT+GGG | + | chr4_1:1935443-1935462 | Msa0528940:intron | 60.0% |
| ATAGGAAAAGGTGGGGGGGC+TGG | + | chr4_1:1935466-1935485 | Msa0528940:CDS | 60.0% | |
| !! | GCTGGTGGAGGTGGTGGATT+TGG | + | chr4_1:1935484-1935503 | Msa0528940:CDS | 60.0% |
| GGAGGACTTGGAGGTGGTCA+TGG | + | chr4_1:1935514-1935533 | Msa0528940:CDS | 60.0% | |
| GGACTTGGAGGTGGTCATGG+TGG | + | chr4_1:1935517-1935536 | Msa0528940:CDS | 60.0% | |
| CTTGGAGGTGGTCATGGTGG+CGG | + | chr4_1:1935520-1935539 | Msa0528940:CDS | 60.0% | |
| !! | TCATGGTGGCGGCTTCGGAA+AGG | + | chr4_1:1935531-1935550 | Msa0528940:CDS | 60.0% |
| !! | CATGGTGGCGGCTTCGGAAA+GGG | + | chr4_1:1935532-1935551 | Msa0528940:CDS | 60.0% |
| GGAAAGGGTGGAGGACTTGG+AGG | + | chr4_1:1935547-1935566 | Msa0528940:CDS | 60.0% | |
| AAGGGTGGAGGACTTGGAGG+TGG | + | chr4_1:1935550-1935569 | Msa0528940:CDS | 60.0% | |
| GGAGGACTTGGAGGTGGTCA+TGG | + | chr4_1:1935514-1935533 | Msa0528940:CDS | 60.0% | |
| GGACTTGGAGGTGGTCATGG+TGG | + | chr4_1:1935517-1935536 | Msa0528940:CDS | 60.0% | |
| CTTGGAGGTGGTCATGGTGG+GGG | + | chr4_1:1935520-1935539 | Msa0528940:CDS | 60.0% | |
| !! | CATGGTGGGGGCATTGGCAA+AGG | + | chr4_1:1935574-1935593 | Msa0528940:CDS | 60.0% |
| !! | GTGGGGGCATTGGCAAAGGT+GGG | + | chr4_1:1935578-1935597 | Msa0528940:CDS | 60.0% |
| !! | TGGGGGCATTGGCAAAGGTG+GGG | + | chr4_1:1935579-1935598 | Msa0528940:CDS | 60.0% |
| ! | GGCAAAGGTGGTGGTGTTGG+AGG | + | chr4_1:1935625-1935644 | Msa0528940:CDS | 60.0% |
| !! | GGTGGTGGCTTTGGAAAGGG+CGG | + | chr4_1:1935655-1935674 | Msa0528940:CDS | 60.0% |
| TTTGGAAAGGGCGGTGGCCT+TGG | + | chr4_1:1935664-1935683 | Msa0528940:CDS | 60.0% | |
| ! | GGTGGCCTTGGAGGTGGTAT+AGG | + | chr4_1:1935676-1935695 | Msa0528940:intron | 60.0% |
| !!! | GGAGGTTTTGGAAAGGGCGG+TGG | + | chr4_1:1935712-1935731 | Msa0528940:CDS | 60.0% |
| GGCAAAGGTGGAGGTCTTGG+AGG | + | chr4_1:1935751-1935770 | Msa0528940:CDS | 60.0% | |
| !! | CTTGGAGGTGGTGGAGGCTT+TGG | + | chr4_1:1935766-1935785 | Msa0528940:CDS | 60.0% |
| !! | CTTGGTGGTGGTGGAGGCTT+TGG | + | chr4_1:1935832-1935851 | Msa0528940:CDS | 60.0% |
| GGCAAAGGTGGAGGACTTGG+TGG | + | chr4_1:1935883-1935902 | Msa0528940:CDS | 60.0% | |
| !! | GGTGGCGGAGGCTTTGGAAA+AGG | + | chr4_1:1935904-1935923 | Msa0528940:CDS | 60.0% |
| !! | GGCGGAGGCTTTGGAAAAGG+TGG | + | chr4_1:1935907-1935926 | Msa0528940:intron | 60.0% |
| ! | GGTGGTGTTGGAGGTGGCAT+TGG | + | chr4_1:1935928-1935947 | Msa0528940:intron | 60.0% |
| ! | GGTGGTGTTGGAGGTGGGAT+TGG | + | chr4_1:1935976-1935995 | Msa0528940:intron | 60.0% |
| ! | GGAGGTGGGATTGGCAAAGG+TGG | + | chr4_1:1935985-1936004 | Msa0528940:intron | 60.0% |
| ! | GGTGGGATTGGCAAAGGTGG+AGG | + | chr4_1:1935988-1936007 | Msa0528940:intron | 60.0% |
| ! | TCTGGTGGAGGTGGTGGTGT+TGG | + | chr4_1:1936084-1936103 | Msa0528940:CDS | 60.0% |
| ! | GGTGGTGTTGGAGGTGGTTC+TGG | + | chr4_1:1936096-1936115 | Msa0528940:CDS | 60.0% |
| !! | GGTGTTGGAGGTGGTTCTGG+TGG | + | chr4_1:1936099-1936118 | Msa0528940:CDS | 60.0% |
| !! | GTTGGAGGTGGTTCTGGTGG+AGG | + | chr4_1:1936102-1936121 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGAGGTGGTGGTTTTGG+AGG | + | chr4_1:1936117-1936136 | Msa0528940:CDS | 60.0% |
| !!! | GGAGGTGGTGGTTTTGGAGG+CGG | + | chr4_1:1936120-1936139 | Msa0528940:CDS | 60.0% |
| !!! | GGTGGTTTTGGAGGCGGTTC+TGG | + | chr4_1:1936126-1936145 | Msa0528940:CDS | 60.0% |
| !! | GGAGGTATTGGGGGTGGTTC+AGG | + | chr4_1:1936186-1936205 | Msa0528940:CDS | 60.0% |
| ! | GGTATTGGGGGTGGTTCAGG+TGG | + | chr4_1:1936189-1936208 | Msa0528940:CDS | 60.0% |
| ATTGGGGGTGGTTCAGGTGG+AGG | + | chr4_1:1936192-1936211 | Msa0528940:CDS | 60.0% | |
| !! | TCAGGTGGAGGTTTTGGCGG+TGG | + | chr4_1:1936204-1936223 | Msa0528940:CDS | 60.0% |
| !! | GGAGGTTTTGGCGGTGGTGT+TGG | + | chr4_1:1936210-1936229 | Msa0528940:CDS | 60.0% |
| !! | GGTTTTGGCGGTGGTGTTGG+AGG | + | chr4_1:1936213-1936232 | Msa0528940:CDS | 60.0% |
| ! | TTTGGCGGTGGTGTTGGAGG+AGG | + | chr4_1:1936216-1936235 | Msa0528940:CDS | 60.0% |
| ! | GTTGGAGGAGGTGGTGGTTC+TGG | + | chr4_1:1936228-1936247 | Msa0528940:CDS | 60.0% |
| ! | GGCGGCATTGGAGGTGGATT+TGG | + | chr4_1:1936252-1936271 | Msa0528940:CDS | 60.0% |
| !!! | GGAGGTTTTGGTGGTGGTGC+TGG | + | chr4_1:1936282-1936301 | Msa0528940:CDS | 60.0% |
| !!! | GGTTTTGGTGGTGGTGCTGG+AGG | + | chr4_1:1936285-1936304 | Msa0528940:CDS | 60.0% |
| !! | TTTGGTGGTGGTGCTGGAGG+AGG | + | chr4_1:1936288-1936307 | Msa0528940:CDS | 60.0% |
| !! | GGCAAAGGTGGTGGCTTTGG+AGG | + | chr4_1:1936339-1936358 | Msa0528940:CDS | 60.0% |
| !! | GGTGGCTTTGGAGGAGGTCT+TGG | + | chr4_1:1936348-1936367 | Msa0528940:CDS | 60.0% |
| !! | GGCTTTGGAGGAGGTCTTGG+TGG | + | chr4_1:1936351-1936370 | Msa0528940:CDS | 60.0% |
| GGAGGTCTTGGTGGAGGAGA+AGG | + | chr4_1:1936360-1936379 | Msa0528940:CDS | 60.0% | |
| GGTCTTGGTGGAGGAGAAGG+AGG | + | chr4_1:1936363-1936382 | Msa0528940:CDS | 60.0% | |
| CTTGGTGGAGGAGAAGGAGG+TGG | + | chr4_1:1936366-1936385 | Msa0528940:CDS | 60.0% | |
| GTCGGGTTTGGCAAGGGAGG+TGG | + | chr4_1:1935214-1935233 | Msa0528940:CDS | 65.0% | |
| ! | GGCAAGGGAGGTGGGTTTGG+AGG | + | chr4_1:1935223-1935242 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTGGGTTTGGTGGTGG+AGG | + | chr4_1:1935241-1935260 | Msa0528940:CDS | 65.0% |
| !! | GGTGGGTTTGGTGGTGGAGG+AGG | + | chr4_1:1935244-1935263 | Msa0528940:CDS | 65.0% |
| !!! | GGCGGTGGTGGTTTTGGTGG+AGG | + | chr4_1:1935280-1935299 | Msa0528940:CDS | 65.0% |
| GTGGTGCAGGAGGTGGAGGA+GGG | + | chr4_1:1935317-1935336 | Msa0528940:CDS | 65.0% | |
| GCAGGAGGTGGAGGAGGGTT+TGG | + | chr4_1:1935322-1935341 | Msa0528940:CDS | 65.0% | |
| GGAGGTGGAGGAGGGTTTGG+TGG | + | chr4_1:1935325-1935344 | Msa0528940:CDS | 65.0% | |
| !! | GGTGGAGGAGGGTTTGGTGG+TGG | + | chr4_1:1935328-1935347 | Msa0528940:CDS | 65.0% |
| !! | GGAGGGTTTGGTGGTGGTGC+AGG | + | chr4_1:1935334-1935353 | Msa0528940:CDS | 65.0% |
| !! | GGGTTTGGTGGTGGTGCAGG+CGG | + | chr4_1:1935337-1935356 | Msa0528940:CDS | 65.0% |
| !! | TTTGGTGGTGGTGCAGGCGG+CGG | + | chr4_1:1935340-1935359 | Msa0528940:CDS | 65.0% |
| GCAGGCGGCGGACATGGAAT+TGG | + | chr4_1:1935352-1935371 | Msa0528940:CDS | 65.0% | |
| GGCGGCGGACATGGAATTGG+AGG | + | chr4_1:1935355-1935374 | Msa0528940:CDS | 65.0% | |
| GGAGGTGGAGGAGGGTTTGG+TGG | + | chr4_1:1935325-1935344 | Msa0528940:CDS | 65.0% | |
| !! | GGTGGAGGAGGGTTTGGTGG+CGG | + | chr4_1:1935328-1935347 | Msa0528940:CDS | 65.0% |
| !! | TTTGGTGGCGGTGGAGGTGC+CGG | + | chr4_1:1935388-1935407 | Msa0528940:CDS | 65.0% |
| ! | GGAGGAGGGCATGGGATTGG+AGG | + | chr4_1:1935409-1935428 | Msa0528940:CDS | 65.0% |
| ! | GGAGGGCATGGGATTGGAGG+TGG | + | chr4_1:1935412-1935431 | Msa0528940:intron | 65.0% |
| !! | GGCGGACTTGGTGGTGGGAT+AGG | + | chr4_1:1935448-1935467 | Msa0528940:CDS | 65.0% |
| !! | GGTGGTCATGGTGGCGGCTT+CGG | + | chr4_1:1935526-1935545 | Msa0528940:CDS | 65.0% |
| ! | GGTGGTCATGGTGGGGGCAT+TGG | + | chr4_1:1935568-1935587 | Msa0528940:CDS | 65.0% |
| !! | GGTGGGGGCATTGGCAAAGG+TGG | + | chr4_1:1935577-1935596 | Msa0528940:CDS | 65.0% |
| !! | GGGGGCATTGGCAAAGGTGG+GGG | + | chr4_1:1935580-1935599 | Msa0528940:CDS | 65.0% |
| !! | GGGGCATTGGCAAAGGTGGG+GGG | + | chr4_1:1935581-1935600 | Msa0528940:CDS | 65.0% |
| AAAGGTGGGGGGTTCGGAGG+TGG | + | chr4_1:1935592-1935611 | Msa0528940:CDS | 65.0% | |
| ! | GGTGGTGTTGGAGGAGGGTC+AGG | + | chr4_1:1935634-1935653 | Msa0528940:CDS | 65.0% |
| ! | GGTGTTGGAGGAGGGTCAGG+TGG | + | chr4_1:1935637-1935656 | Msa0528940:CDS | 65.0% |
| GTTGGAGGAGGGTCAGGTGG+TGG | + | chr4_1:1935640-1935659 | Msa0528940:CDS | 65.0% | |
| ! | GGAGGGTCAGGTGGTGGCTT+TGG | + | chr4_1:1935646-1935665 | Msa0528940:CDS | 65.0% |
| !! | GGTGGCTTTGGAAAGGGCGG+TGG | + | chr4_1:1935658-1935677 | Msa0528940:CDS | 65.0% |
| ! | GGAAAGGGCGGTGGTGTTGG+AGG | + | chr4_1:1935721-1935740 | Msa0528940:CDS | 65.0% |
| ! | AAGGGCGGTGGTGTTGGAGG+TGG | + | chr4_1:1935724-1935743 | Msa0528940:CDS | 65.0% |
| GGTGGAGGTCTTGGAGGTGG+TGG | + | chr4_1:1935757-1935776 | Msa0528940:CDS | 65.0% | |
| ! | GGAGGTCTTGGAGGTGGTGG+AGG | + | chr4_1:1935760-1935779 | Msa0528940:CDS | 65.0% |
| !! | GGTGGAGGTCTTGGTGGTGG+TGG | + | chr4_1:1935823-1935842 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTCTTGGTGGTGGTGG+AGG | + | chr4_1:1935826-1935845 | Msa0528940:CDS | 65.0% |
| !! | GGTGGAGGACTTGGTGGTGG+CGG | + | chr4_1:1935889-1935908 | Msa0528940:CDS | 65.0% |
| !! | CTTGGTGGTGGCGGAGGCTT+TGG | + | chr4_1:1935898-1935917 | Msa0528940:CDS | 65.0% |
| ! | GGAGGAGGTTCTGGTGGAGG+TGG | + | chr4_1:1936075-1936094 | Msa0528940:CDS | 65.0% |
| ! | GGAGGTTCTGGTGGAGGTGG+TGG | + | chr4_1:1936078-1936097 | Msa0528940:CDS | 65.0% |
| ! | GGTGGAGGTGGTGGTGTTGG+AGG | + | chr4_1:1936087-1936106 | Msa0528940:CDS | 65.0% |
| ! | GGAGGTGGTGGTGTTGGAGG+TGG | + | chr4_1:1936090-1936109 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTGGTTCTGGTGGAGG+TGG | + | chr4_1:1936105-1936124 | Msa0528940:CDS | 65.0% |
| !! | GGTGGTTCTGGTGGAGGTGG+TGG | + | chr4_1:1936108-1936127 | Msa0528940:CDS | 65.0% |
| ! | GGTGGTGTTGGAGGAGGTGG+TGG | + | chr4_1:1936222-1936241 | Msa0528940:CDS | 65.0% |
| !! | GGAGGAGGTGGTGGTTCTGG+TGG | + | chr4_1:1936231-1936250 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTGGTGGTTCTGGTGG+CGG | + | chr4_1:1936234-1936253 | Msa0528940:CDS | 65.0% |
| !! | GGTGGTTCTGGTGGCGGCAT+TGG | + | chr4_1:1936240-1936259 | Msa0528940:CDS | 65.0% |
| !! | GGTTCTGGTGGCGGCATTGG+AGG | + | chr4_1:1936243-1936262 | Msa0528940:CDS | 65.0% |
| !! | TCTGGTGGCGGCATTGGAGG+TGG | + | chr4_1:1936246-1936265 | Msa0528940:CDS | 65.0% |
| ! | GGTGGTGCTGGAGGAGGTTC+TGG | + | chr4_1:1936294-1936313 | Msa0528940:CDS | 65.0% |
| ! | GGTGCTGGAGGAGGTTCTGG+TGG | + | chr4_1:1936297-1936316 | Msa0528940:CDS | 65.0% |
| ! | GCTGGAGGAGGTTCTGGTGG+TGG | + | chr4_1:1936300-1936319 | Msa0528940:CDS | 65.0% |
| GGTGGAGGGTTCGGCAAAGG+TGG | + | chr4_1:1936327-1936346 | Msa0528940:CDS | 65.0% | |
| GGAGGGTTCGGCAAAGGTGG+TGG | + | chr4_1:1936330-1936349 | Msa0528940:CDS | 65.0% | |
| GGAGGTGGAGGCGGTGGAAT+TGG | + | chr4_1:1936420-1936439 | Msa0528940:CDS | 65.0% | |
| GTCGGGTTTGGCAAGGGAGG+TGG | + | chr4_1:1935214-1935233 | Msa0528940:CDS | 65.0% | |
| ! | GGCAAGGGAGGTGGGTTTGG+AGG | + | chr4_1:1935223-1935242 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTGGGTTTGGTGGTGG+AGG | + | chr4_1:1935241-1935260 | Msa0528940:CDS | 65.0% |
| !! | GGTGGGTTTGGTGGTGGAGG+AGG | + | chr4_1:1935244-1935263 | Msa0528940:CDS | 65.0% |
| !!! | GGCGGTGGTGGTTTTGGTGG+AGG | + | chr4_1:1935280-1935299 | Msa0528940:CDS | 65.0% |
| GTGGTGCAGGAGGTGGAGGA+GGG | + | chr4_1:1935317-1935336 | Msa0528940:CDS | 65.0% | |
| GCAGGAGGTGGAGGAGGGTT+TGG | + | chr4_1:1935322-1935341 | Msa0528940:CDS | 65.0% | |
| GGAGGTGGAGGAGGGTTTGG+TGG | + | chr4_1:1935325-1935344 | Msa0528940:CDS | 65.0% | |
| !! | GGTGGAGGAGGGTTTGGTGG+TGG | + | chr4_1:1935328-1935347 | Msa0528940:CDS | 65.0% |
| !! | GGAGGGTTTGGTGGTGGTGC+AGG | + | chr4_1:1935334-1935353 | Msa0528940:CDS | 65.0% |
| !! | GGGTTTGGTGGTGGTGCAGG+CGG | + | chr4_1:1935337-1935356 | Msa0528940:CDS | 65.0% |
| !! | TTTGGTGGTGGTGCAGGCGG+CGG | + | chr4_1:1935340-1935359 | Msa0528940:CDS | 65.0% |
| GCAGGCGGCGGACATGGAAT+TGG | + | chr4_1:1935352-1935371 | Msa0528940:CDS | 65.0% | |
| GGCGGCGGACATGGAATTGG+AGG | + | chr4_1:1935355-1935374 | Msa0528940:CDS | 65.0% | |
| GGAGGTGGAGGAGGGTTTGG+TGG | + | chr4_1:1935325-1935344 | Msa0528940:CDS | 65.0% | |
| !! | GGTGGAGGAGGGTTTGGTGG+CGG | + | chr4_1:1935328-1935347 | Msa0528940:CDS | 65.0% |
| !! | TTTGGTGGCGGTGGAGGTGC+CGG | + | chr4_1:1935388-1935407 | Msa0528940:CDS | 65.0% |
| ! | GGAGGAGGGCATGGGATTGG+AGG | + | chr4_1:1935409-1935428 | Msa0528940:CDS | 65.0% |
| ! | GGAGGGCATGGGATTGGAGG+TGG | + | chr4_1:1935412-1935431 | Msa0528940:intron | 65.0% |
| !! | GGCGGACTTGGTGGTGGGAT+AGG | + | chr4_1:1935448-1935467 | Msa0528940:CDS | 65.0% |
| !! | GGTGGTCATGGTGGCGGCTT+CGG | + | chr4_1:1935526-1935545 | Msa0528940:CDS | 65.0% |
| ! | GGTGGTCATGGTGGGGGCAT+TGG | + | chr4_1:1935568-1935587 | Msa0528940:CDS | 65.0% |
| !! | GGTGGGGGCATTGGCAAAGG+TGG | + | chr4_1:1935577-1935596 | Msa0528940:CDS | 65.0% |
| !! | GGGGGCATTGGCAAAGGTGG+GGG | + | chr4_1:1935580-1935599 | Msa0528940:CDS | 65.0% |
| !! | GGGGCATTGGCAAAGGTGGG+GGG | + | chr4_1:1935581-1935600 | Msa0528940:CDS | 65.0% |
| AAAGGTGGGGGGTTCGGAGG+TGG | + | chr4_1:1935592-1935611 | Msa0528940:CDS | 65.0% | |
| ! | GGTGGTGTTGGAGGAGGGTC+AGG | + | chr4_1:1935634-1935653 | Msa0528940:CDS | 65.0% |
| ! | GGTGTTGGAGGAGGGTCAGG+TGG | + | chr4_1:1935637-1935656 | Msa0528940:CDS | 65.0% |
| GTTGGAGGAGGGTCAGGTGG+TGG | + | chr4_1:1935640-1935659 | Msa0528940:CDS | 65.0% | |
| ! | GGAGGGTCAGGTGGTGGCTT+TGG | + | chr4_1:1935646-1935665 | Msa0528940:CDS | 65.0% |
| !! | GGTGGCTTTGGAAAGGGCGG+TGG | + | chr4_1:1935658-1935677 | Msa0528940:CDS | 65.0% |
| ! | GGAAAGGGCGGTGGTGTTGG+AGG | + | chr4_1:1935721-1935740 | Msa0528940:CDS | 65.0% |
| ! | AAGGGCGGTGGTGTTGGAGG+TGG | + | chr4_1:1935724-1935743 | Msa0528940:CDS | 65.0% |
| GGTGGAGGTCTTGGAGGTGG+TGG | + | chr4_1:1935757-1935776 | Msa0528940:CDS | 65.0% | |
| ! | GGAGGTCTTGGAGGTGGTGG+AGG | + | chr4_1:1935760-1935779 | Msa0528940:CDS | 65.0% |
| !! | GGTGGAGGTCTTGGTGGTGG+TGG | + | chr4_1:1935823-1935842 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTCTTGGTGGTGGTGG+AGG | + | chr4_1:1935826-1935845 | Msa0528940:CDS | 65.0% |
| !! | GGTGGAGGACTTGGTGGTGG+CGG | + | chr4_1:1935889-1935908 | Msa0528940:CDS | 65.0% |
| !! | CTTGGTGGTGGCGGAGGCTT+TGG | + | chr4_1:1935898-1935917 | Msa0528940:CDS | 65.0% |
| ! | GGAGGAGGTTCTGGTGGAGG+TGG | + | chr4_1:1936075-1936094 | Msa0528940:CDS | 65.0% |
| ! | GGAGGTTCTGGTGGAGGTGG+TGG | + | chr4_1:1936078-1936097 | Msa0528940:CDS | 65.0% |
| ! | GGTGGAGGTGGTGGTGTTGG+AGG | + | chr4_1:1936087-1936106 | Msa0528940:CDS | 65.0% |
| ! | GGAGGTGGTGGTGTTGGAGG+TGG | + | chr4_1:1936090-1936109 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTGGTTCTGGTGGAGG+TGG | + | chr4_1:1936105-1936124 | Msa0528940:CDS | 65.0% |
| !! | GGTGGTTCTGGTGGAGGTGG+TGG | + | chr4_1:1936108-1936127 | Msa0528940:CDS | 65.0% |
| ! | GGTGGTGTTGGAGGAGGTGG+TGG | + | chr4_1:1936222-1936241 | Msa0528940:CDS | 65.0% |
| !! | GGAGGAGGTGGTGGTTCTGG+TGG | + | chr4_1:1936231-1936250 | Msa0528940:CDS | 65.0% |
| !! | GGAGGTGGTGGTTCTGGTGG+CGG | + | chr4_1:1936234-1936253 | Msa0528940:CDS | 65.0% |
| !! | GGTGGTTCTGGTGGCGGCAT+TGG | + | chr4_1:1936240-1936259 | Msa0528940:CDS | 65.0% |
| !! | GGTTCTGGTGGCGGCATTGG+AGG | + | chr4_1:1936243-1936262 | Msa0528940:CDS | 65.0% |
| !! | TCTGGTGGCGGCATTGGAGG+TGG | + | chr4_1:1936246-1936265 | Msa0528940:CDS | 65.0% |
| ! | GGTGGTGCTGGAGGAGGTTC+TGG | + | chr4_1:1936294-1936313 | Msa0528940:CDS | 65.0% |
| ! | GGTGCTGGAGGAGGTTCTGG+TGG | + | chr4_1:1936297-1936316 | Msa0528940:CDS | 65.0% |
| ! | GCTGGAGGAGGTTCTGGTGG+TGG | + | chr4_1:1936300-1936319 | Msa0528940:CDS | 65.0% |
| GGTGGAGGGTTCGGCAAAGG+TGG | + | chr4_1:1936327-1936346 | Msa0528940:CDS | 65.0% | |
| GGAGGGTTCGGCAAAGGTGG+TGG | + | chr4_1:1936330-1936349 | Msa0528940:CDS | 65.0% | |
| GGAGGTGGAGGCGGTGGAAT+TGG | + | chr4_1:1936420-1936439 | Msa0528940:CDS | 65.0% | |
| !! | GGTGGTGGAGGAGGAGCTGG+TGG | + | chr4_1:1935253-1935272 | Msa0528940:CDS | 70.0% |
| GGTGGAGGAGGAGCTGGTGG+TGG | + | chr4_1:1935256-1935275 | Msa0528940:CDS | 70.0% | |
| !! | GGAGGAGGAGCTGGTGGTGG+CGG | + | chr4_1:1935259-1935278 | Msa0528940:CDS | 70.0% |
| !! | GGTGGCGGCGGTGGTGGTTT+TGG | + | chr4_1:1935274-1935293 | Msa0528940:CDS | 70.0% |
| !!! | GGCGGCGGTGGTGGTTTTGG+TGG | + | chr4_1:1935277-1935296 | Msa0528940:CDS | 70.0% |
| ! | GGTGGTGGTGCAGGAGGTGG+AGG | + | chr4_1:1935313-1935332 | Msa0528940:CDS | 70.0% |
| GGTGGTGCAGGAGGTGGAGG+AGG | + | chr4_1:1935316-1935335 | Msa0528940:CDS | 70.0% | |
| !! | GGAGGAGGGTTTGGTGGCGG+TGG | + | chr4_1:1935379-1935398 | Msa0528940:CDS | 70.0% |
| !! | GGAGGGTTTGGTGGCGGTGG+AGG | + | chr4_1:1935382-1935401 | Msa0528940:CDS | 70.0% |
| !! | GAGGTGCCGGAGGAGGGCAT+GGG | + | chr4_1:1935401-1935420 | Msa0528940:CDS | 70.0% |
| ! | GCCGGAGGAGGGCATGGGAT+TGG | + | chr4_1:1935406-1935425 | Msa0528940:CDS | 70.0% |
| GGAAAAGGTGGGGGGGCTGG+TGG | + | chr4_1:1935469-1935488 | Msa0528940:CDS | 70.0% | |
| ! | AAAGGTGGGGGGGCTGGTGG+AGG | + | chr4_1:1935472-1935491 | Msa0528940:CDS | 70.0% |
| ! | GGTGGCGGCTTCGGAAAGGG+TGG | + | chr4_1:1935535-1935554 | Msa0528940:CDS | 70.0% |
| GGCGGCTTCGGAAAGGGTGG+AGG | + | chr4_1:1935538-1935557 | Msa0528940:CDS | 70.0% | |
| GGCAAAGGTGGGGGGTTCGG+AGG | + | chr4_1:1935589-1935608 | Msa0528940:CDS | 70.0% | |
| ! | GGAAAGGGCGGTGGCCTTGG+AGG | + | chr4_1:1935667-1935686 | Msa0528940:CDS | 70.0% |
| ! | AAGGGCGGTGGCCTTGGAGG+TGG | + | chr4_1:1935670-1935689 | Msa0528940:CDS | 70.0% |
| !! | GGAGGACTTGGTGGTGGCGG+AGG | + | chr4_1:1935892-1935911 | Msa0528940:CDS | 70.0% |
| ! | GGCGGTGGTGTTGGAGGAGG+TGG | + | chr4_1:1936219-1936238 | Msa0528940:CDS | 70.0% |
| !! | GGTGGAGGGTTTGGTGGCGG+TGG | + | chr4_1:1936393-1936412 | Msa0528940:CDS | 70.0% |
| !! | GGAGGGTTTGGTGGCGGTGG+CGG | + | chr4_1:1935382-1935401 | Msa0528940:CDS | 70.0% |
| !! | TTTGGTGGCGGTGGCGGAGG+AGG | + | chr4_1:1936402-1936421 | Msa0528940:CDS | 70.0% |
| !! | GGTGGTGGAGGAGGAGCTGG+TGG | + | chr4_1:1935253-1935272 | Msa0528940:CDS | 70.0% |
| GGTGGAGGAGGAGCTGGTGG+TGG | + | chr4_1:1935256-1935275 | Msa0528940:CDS | 70.0% | |
| !! | GGAGGAGGAGCTGGTGGTGG+CGG | + | chr4_1:1935259-1935278 | Msa0528940:CDS | 70.0% |
| !! | GGTGGCGGCGGTGGTGGTTT+TGG | + | chr4_1:1935274-1935293 | Msa0528940:CDS | 70.0% |
| !!! | GGCGGCGGTGGTGGTTTTGG+TGG | + | chr4_1:1935277-1935296 | Msa0528940:CDS | 70.0% |
| ! | GGTGGTGGTGCAGGAGGTGG+AGG | + | chr4_1:1935313-1935332 | Msa0528940:CDS | 70.0% |
| GGTGGTGCAGGAGGTGGAGG+AGG | + | chr4_1:1935316-1935335 | Msa0528940:CDS | 70.0% | |
| !! | GGAGGAGGGTTTGGTGGCGG+TGG | + | chr4_1:1935379-1935398 | Msa0528940:CDS | 70.0% |
| !! | GGAGGGTTTGGTGGCGGTGG+AGG | + | chr4_1:1935382-1935401 | Msa0528940:CDS | 70.0% |
| !! | GAGGTGCCGGAGGAGGGCAT+GGG | + | chr4_1:1935401-1935420 | Msa0528940:CDS | 70.0% |
| ! | GCCGGAGGAGGGCATGGGAT+TGG | + | chr4_1:1935406-1935425 | Msa0528940:CDS | 70.0% |
| GGAAAAGGTGGGGGGGCTGG+TGG | + | chr4_1:1935469-1935488 | Msa0528940:CDS | 70.0% | |
| ! | AAAGGTGGGGGGGCTGGTGG+AGG | + | chr4_1:1935472-1935491 | Msa0528940:CDS | 70.0% |
| ! | GGTGGCGGCTTCGGAAAGGG+TGG | + | chr4_1:1935535-1935554 | Msa0528940:CDS | 70.0% |
| GGCGGCTTCGGAAAGGGTGG+AGG | + | chr4_1:1935538-1935557 | Msa0528940:CDS | 70.0% | |
| GGCAAAGGTGGGGGGTTCGG+AGG | + | chr4_1:1935589-1935608 | Msa0528940:CDS | 70.0% | |
| ! | GGAAAGGGCGGTGGCCTTGG+AGG | + | chr4_1:1935667-1935686 | Msa0528940:CDS | 70.0% |
| ! | AAGGGCGGTGGCCTTGGAGG+TGG | + | chr4_1:1935670-1935689 | Msa0528940:CDS | 70.0% |
| !! | GGAGGACTTGGTGGTGGCGG+AGG | + | chr4_1:1935892-1935911 | Msa0528940:CDS | 70.0% |
| ! | GGCGGTGGTGTTGGAGGAGG+TGG | + | chr4_1:1936219-1936238 | Msa0528940:CDS | 70.0% |
| !! | GGTGGAGGGTTTGGTGGCGG+TGG | + | chr4_1:1936393-1936412 | Msa0528940:CDS | 70.0% |
| !! | GGAGGGTTTGGTGGCGGTGG+CGG | + | chr4_1:1935382-1935401 | Msa0528940:CDS | 70.0% |
| !! | TTTGGTGGCGGTGGCGGAGG+AGG | + | chr4_1:1936402-1936421 | Msa0528940:CDS | 70.0% |
| !! | GGAGGAGCTGGTGGTGGCGG+CGG | + | chr4_1:1935262-1935281 | Msa0528940:CDS | 75.0% |
| GGTGGTGCAGGCGGCGGACA+TGG | + | chr4_1:1935346-1935365 | Msa0528940:CDS | 75.0% | |
| !! | GCGGTGGAGGTGCCGGAGGA+GGG | + | chr4_1:1935395-1935414 | Msa0528940:CDS | 75.0% |
| !! | GGAGGTGCCGGAGGAGGGCA+TGG | + | chr4_1:1935400-1935419 | Msa0528940:CDS | 75.0% |
| GGTGGGGGGTTCGGAGGTGG+TGG | + | chr4_1:1935595-1935614 | Msa0528940:CDS | 75.0% | |
| ! | GGGGGGTTCGGAGGTGGTGG+TGG | + | chr4_1:1935598-1935617 | Msa0528940:CDS | 75.0% |
| !! | GGGTTTGGTGGCGGTGGCGG+AGG | + | chr4_1:1936399-1936418 | Msa0528940:CDS | 75.0% |
| !! | GGTGGCGGAGGAGGTGGAGG+CGG | + | chr4_1:1936411-1936430 | Msa0528940:CDS | 75.0% |
| !! | GGAGGAGCTGGTGGTGGCGG+CGG | + | chr4_1:1935262-1935281 | Msa0528940:CDS | 75.0% |
| GGTGGTGCAGGCGGCGGACA+TGG | + | chr4_1:1935346-1935365 | Msa0528940:CDS | 75.0% | |
| !! | GCGGTGGAGGTGCCGGAGGA+GGG | + | chr4_1:1935395-1935414 | Msa0528940:CDS | 75.0% |
| !! | GGAGGTGCCGGAGGAGGGCA+TGG | + | chr4_1:1935400-1935419 | Msa0528940:CDS | 75.0% |
| GGTGGGGGGTTCGGAGGTGG+TGG | + | chr4_1:1935595-1935614 | Msa0528940:CDS | 75.0% | |
| ! | GGGGGGTTCGGAGGTGGTGG+TGG | + | chr4_1:1935598-1935617 | Msa0528940:CDS | 75.0% |
| !! | GGGTTTGGTGGCGGTGGCGG+AGG | + | chr4_1:1936399-1936418 | Msa0528940:CDS | 75.0% |
| !! | GGTGGCGGAGGAGGTGGAGG+CGG | + | chr4_1:1936411-1936430 | Msa0528940:CDS | 75.0% |
| !!! | GGAGCTGGTGGTGGCGGCGG+TGG | + | chr4_1:1935265-1935284 | Msa0528940:CDS | 80.0% |
| !!! | GCTGGTGGTGGCGGCGGTGG+TGG | + | chr4_1:1935268-1935287 | Msa0528940:CDS | 80.0% |
| !!! | GGTGGCGGTGGAGGTGCCGG+AGG | + | chr4_1:1935391-1935410 | Msa0528940:CDS | 80.0% |
| !!! | GGCGGTGGAGGTGCCGGAGG+AGG | + | chr4_1:1935394-1935413 | Msa0528940:CDS | 80.0% |
| !! | GGTGGGGGGGCTGGTGGAGG+TGG | + | chr4_1:1935475-1935494 | Msa0528940:CDS | 80.0% |
| !! | GGGGGGGCTGGTGGAGGTGG+TGG | + | chr4_1:1935478-1935497 | Msa0528940:CDS | 80.0% |
| !!! | GGTGGCGGTGGCGGAGGAGG+TGG | + | chr4_1:1936405-1936424 | Msa0528940:CDS | 80.0% |
| !!! | GGCGGTGGCGGAGGAGGTGG+AGG | + | chr4_1:1936408-1936427 | Msa0528940:CDS | 80.0% |
| ! | GGCGGAGGAGGTGGAGGCGG+TGG | + | chr4_1:1936414-1936433 | Msa0528940:CDS | 80.0% |
| !!! | GGAGCTGGTGGTGGCGGCGG+TGG | + | chr4_1:1935265-1935284 | Msa0528940:CDS | 80.0% |
| !!! | GCTGGTGGTGGCGGCGGTGG+TGG | + | chr4_1:1935268-1935287 | Msa0528940:CDS | 80.0% |
| !!! | GGTGGCGGTGGAGGTGCCGG+AGG | + | chr4_1:1935391-1935410 | Msa0528940:CDS | 80.0% |
| !!! | GGCGGTGGAGGTGCCGGAGG+AGG | + | chr4_1:1935394-1935413 | Msa0528940:CDS | 80.0% |
| !! | GGTGGGGGGGCTGGTGGAGG+TGG | + | chr4_1:1935475-1935494 | Msa0528940:CDS | 80.0% |
| !! | GGGGGGGCTGGTGGAGGTGG+TGG | + | chr4_1:1935478-1935497 | Msa0528940:CDS | 80.0% |
| !!! | GGTGGCGGTGGCGGAGGAGG+TGG | + | chr4_1:1936405-1936424 | Msa0528940:CDS | 80.0% |
| !!! | GGCGGTGGCGGAGGAGGTGG+AGG | + | chr4_1:1936408-1936427 | Msa0528940:CDS | 80.0% |
| ! | GGCGGAGGAGGTGGAGGCGG+TGG | + | chr4_1:1936414-1936433 | Msa0528940:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 1935184 | 1936645 | 1935184 | ID=Msa0528940;Name=Msa0528940 |
| chr4_1 | mRNA | 1935184 | 1936645 | 1935184 | ID=Msa0528940-mRNA-1;Parent=Msa0528940;Name=Msa0528940-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.33|0.25|0.5|0|0|4|193|383 |
| chr4_1 | exon | 1935184 | 1935430 | 1935184 | ID=Msa0528940-mRNA-1:exon:594;Parent=Msa0528940-mRNA-1 |
| chr4_1 | exon | 1935446 | 1935691 | 1935446 | ID=Msa0528940-mRNA-1:exon:595;Parent=Msa0528940-mRNA-1 |
| chr4_1 | exon | 1935698 | 1935925 | 1935698 | ID=Msa0528940-mRNA-1:exon:596;Parent=Msa0528940-mRNA-1 |
| chr4_1 | exon | 1936022 | 1936645 | 1936022 | ID=Msa0528940-mRNA-1:exon:597;Parent=Msa0528940-mRNA-1 |
| chr4_1 | CDS | 1935184 | 1935430 | 1935184 | ID=Msa0528940-mRNA-1:cds;Parent=Msa0528940-mRNA-1 |
| chr4_1 | CDS | 1935446 | 1935691 | 1935446 | ID=Msa0528940-mRNA-1:cds;Parent=Msa0528940-mRNA-1 |
| chr4_1 | CDS | 1935698 | 1935925 | 1935698 | ID=Msa0528940-mRNA-1:cds;Parent=Msa0528940-mRNA-1 |
| chr4_1 | CDS | 1936022 | 1936452 | 1936022 | ID=Msa0528940-mRNA-1:cds;Parent=Msa0528940-mRNA-1 |
| chr4_1 | three_prime_UTR | 1936453 | 1936645 | 1936453 | ID=Msa0528940-mRNA-1:three_prime_utr;Parent=Msa0528940-mRNA-1 |
| Gene Sequence |
| Protein sequence |