Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633750 | XP_013455085.1 | 82.090 | 268 | 1 | 1 | 1 | 268 | 1 | 221 | 1.75e-154 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633750 | sp|O22152|YAB1_ARATH | 57.529 | 259 | 53 | 7 | 19 | 268 | 19 | 229 | 1.30e-84 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633750 | A0A072UJ49 | 82.090 | 268 | 1 | 1 | 1 | 268 | 1 | 221 | 8.38e-155 | 439 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0633750 | TF | C2C2-YABBY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0633750 | 0.854872 | 9.212687e-62 | -8.615850e-47 |
| Msa0004360 | Msa0633750 | 0.813912 | 2.012912e-51 | -8.615850e-47 |
| Msa0005050 | Msa0633750 | 0.827838 | 1.254375e-54 | -8.615850e-47 |
| Msa0006870 | Msa0633750 | 0.819928 | 8.975681e-53 | -8.615850e-47 |
| Msa0007450 | Msa0633750 | 0.810596 | 1.065369e-50 | -8.615850e-47 |
| Msa0017120 | Msa0633750 | 0.824066 | 9.872989e-54 | -8.615850e-47 |
| Msa0017940 | Msa0633750 | 0.807860 | 4.111289e-50 | -8.615850e-47 |
| Msa0018220 | Msa0633750 | 0.800224 | 1.593264e-48 | -8.615850e-47 |
| Msa0030310 | Msa0633750 | 0.829220 | 5.814280e-55 | -8.615850e-47 |
| Msa0041540 | Msa0633750 | 0.864010 | 1.653404e-64 | -8.615850e-47 |
| Msa0041610 | Msa0633750 | 0.808043 | 3.758600e-50 | -8.615850e-47 |
| Msa0043680 | Msa0633750 | 0.832439 | 9.448912e-56 | -8.615850e-47 |
| Msa0043940 | Msa0633750 | 0.802046 | 6.754639e-49 | -8.615850e-47 |
| Msa0050580 | Msa0633750 | 0.804119 | 2.517381e-49 | -8.615850e-47 |
| Msa0053110 | Msa0633750 | 0.840961 | 6.343982e-58 | -8.615850e-47 |
| Msa0065390 | Msa0633750 | 0.827510 | 1.503556e-54 | -8.615850e-47 |
| Msa0077410 | Msa0633750 | 0.830348 | 3.089972e-55 | -8.615850e-47 |
| Msa0092180 | Msa0633750 | 0.802985 | 4.326079e-49 | -8.615850e-47 |
| Msa0092660 | Msa0633750 | 0.835017 | 2.142803e-56 | -8.615850e-47 |
| Msa0092680 | Msa0633750 | 0.811959 | 5.392910e-51 | -8.615850e-47 |
| Msa0092710 | Msa0633750 | 0.806073 | 9.819368e-50 | -8.615850e-47 |
| Msa0092730 | Msa0633750 | 0.835228 | 1.896481e-56 | -8.615850e-47 |
| Msa0097050 | Msa0633750 | 0.801070 | 1.070760e-48 | -8.615850e-47 |
| Msa0098440 | Msa0633750 | 0.805297 | 1.428549e-49 | -8.615850e-47 |
| Msa0100570 | Msa0633750 | 0.821870 | 3.208214e-53 | -8.615850e-47 |
| Msa0100860 | Msa0633750 | 0.819248 | 1.283325e-52 | -8.615850e-47 |
| Msa0110710 | Msa0633750 | 0.831006 | 2.132084e-55 | -8.615850e-47 |
| Msa0607600 | Msa0633750 | -0.802602 | 5.189624e-49 | -8.615850e-47 |
| Msa0614230 | Msa0633750 | 0.812766 | 3.594623e-51 | -8.615850e-47 |
| Msa0619330 | Msa0633750 | 0.809303 | 2.022339e-50 | -8.615850e-47 |
| Msa0620270 | Msa0633750 | 0.814584 | 1.429925e-51 | -8.615850e-47 |
| Msa0633750 | Msa0634270 | 0.813161 | 2.945076e-51 | -8.615850e-47 |
| Msa0633750 | Msa0638690 | 0.805941 | 1.046710e-49 | -8.615850e-47 |
| Msa0633750 | Msa0640390 | 0.810250 | 1.265723e-50 | -8.615850e-47 |
| Msa0633750 | Msa0640880 | 0.831222 | 1.886017e-55 | -8.615850e-47 |
| Msa0633750 | Msa0640990 | 0.822963 | 1.787617e-53 | -8.615850e-47 |
| Msa0633750 | Msa0641620 | 0.844244 | 8.524733e-59 | -8.615850e-47 |
| Msa0633750 | Msa0642650 | 0.842145 | 3.092033e-58 | -8.615850e-47 |
| Msa0633750 | Msa0654540 | 0.811395 | 7.152995e-51 | -8.615850e-47 |
| Msa0633750 | Msa0659920 | 0.803260 | 3.795091e-49 | -8.615850e-47 |
| Msa0633750 | Msa0667970 | 0.809649 | 1.704861e-50 | -8.615850e-47 |
| Msa0633750 | Msa0672110 | 0.893796 | 4.499303e-75 | -8.615850e-47 |
| Msa0633750 | Msa0678890 | 0.826127 | 3.217727e-54 | -8.615850e-47 |
| Msa0633750 | Msa0680150 | 0.840705 | 7.403160e-58 | -8.615850e-47 |
| Msa0633750 | Msa0681890 | 0.859740 | 3.355929e-63 | -8.615850e-47 |
| Msa0633750 | Msa0682400 | 0.804684 | 1.919405e-49 | -8.615850e-47 |
| Msa0633750 | Msa0686240 | 0.806017 | 1.008979e-49 | -8.615850e-47 |
| Msa0633750 | Msa0687860 | -0.805008 | 1.642307e-49 | -8.615850e-47 |
| Msa0633750 | Msa0690560 | 0.800624 | 1.320876e-48 | -8.615850e-47 |
| Msa0633750 | Msa0703720 | 0.812654 | 3.802211e-51 | -8.615850e-47 |
| Msa0633750 | Msa0703760 | 0.833779 | 4.384688e-56 | -8.615850e-47 |
| Msa0633750 | Msa0706580 | 0.824133 | 9.521194e-54 | -8.615850e-47 |
| Msa0633750 | Msa0709480 | 0.805938 | 1.048051e-49 | -8.615850e-47 |
| Msa0633750 | Msa0717090 | 0.803154 | 3.992347e-49 | -8.615850e-47 |
| Msa0633750 | Msa0722940 | 0.850336 | 1.813627e-60 | -8.615850e-47 |
| Msa0633750 | Msa0723150 | 0.851241 | 1.008984e-60 | -8.615850e-47 |
| Msa0633750 | Msa0725920 | 0.808299 | 3.316245e-50 | -8.615850e-47 |
| Msa0633750 | Msa0730180 | 0.817641 | 2.968585e-52 | -8.615850e-47 |
| Msa0633750 | Msa0738880 | 0.812242 | 4.677653e-51 | -8.615850e-47 |
| Msa0633750 | Msa0747780 | 0.834497 | 2.896172e-56 | -8.615850e-47 |
| Msa0633750 | Msa0761580 | 0.809630 | 1.720948e-50 | -8.615850e-47 |
| Msa0633750 | Msa0761790 | 0.801437 | 9.008169e-49 | -8.615850e-47 |
| Msa0633750 | Msa0766470 | 0.800076 | 1.707797e-48 | -8.615850e-47 |
| Msa0633750 | Msa0799210 | 0.817023 | 4.089249e-52 | -8.615850e-47 |
| Msa0633750 | Msa0803130 | 0.844915 | 5.623467e-59 | -8.615850e-47 |
| Msa0633750 | Msa0804110 | 0.827872 | 1.230641e-54 | -8.615850e-47 |
| Msa0633750 | Msa0819320 | 0.804605 | 1.994071e-49 | -8.615850e-47 |
| Msa0633750 | Msa0819370 | 0.810768 | 9.781171e-51 | -8.615850e-47 |
| Msa0633750 | Msa0841490 | 0.840875 | 6.681138e-58 | -8.615850e-47 |
| Msa0633750 | Msa0843290 | 0.825084 | 5.684001e-54 | -8.615850e-47 |
| Msa0633750 | Msa0854570 | 0.804680 | 1.922711e-49 | -8.615850e-47 |
| Msa0633750 | Msa0872310 | 0.828881 | 7.024909e-55 | -8.615850e-47 |
| Msa0633750 | Msa0877420 | 0.816961 | 4.222472e-52 | -8.615850e-47 |
| Msa0633750 | Msa0883030 | 0.803507 | 3.373561e-49 | -8.615850e-47 |
| Msa0633750 | Msa0890250 | 0.805265 | 1.450767e-49 | -8.615850e-47 |
| Msa0633750 | Msa0905550 | 0.833143 | 6.317684e-56 | -8.615850e-47 |
| Msa0633750 | Msa0925160 | 0.826827 | 2.190867e-54 | -8.615850e-47 |
| Msa0633750 | Msa0930330 | 0.842991 | 1.843818e-58 | -8.615850e-47 |
| Msa0633750 | Msa0931480 | 0.852836 | 3.554863e-61 | -8.615850e-47 |
| Msa0633750 | Msa0937550 | 0.842621 | 2.312842e-58 | -8.615850e-47 |
| Msa0633750 | Msa0938430 | 0.814828 | 1.262734e-51 | -8.615850e-47 |
| Msa0633750 | Msa0955260 | 0.837910 | 3.931749e-57 | -8.615850e-47 |
| Msa0633750 | Msa0955300 | 0.813382 | 2.632478e-51 | -8.615850e-47 |
| Msa0633750 | Msa0958020 | 0.810737 | 9.932123e-51 | -8.615850e-47 |
| Msa0633750 | Msa0972730 | 0.815238 | 1.024061e-51 | -8.615850e-47 |
| Msa0633750 | Msa0974750 | 0.837281 | 5.700356e-57 | -8.615850e-47 |
| Msa0633750 | Msa0990520 | 0.833250 | 5.940334e-56 | -8.615850e-47 |
| Msa0633750 | Msa0992570 | 0.821979 | 3.026614e-53 | -8.615850e-47 |
| Msa0633750 | Msa0992590 | 0.844832 | 5.921521e-59 | -8.615850e-47 |
| Msa0633750 | Msa1002040 | 0.829549 | 4.836346e-55 | -8.615850e-47 |
| Msa0633750 | Msa1004500 | 0.840148 | 1.035557e-57 | -8.615850e-47 |
| Msa0633750 | Msa1004520 | 0.832765 | 7.841702e-56 | -8.615850e-47 |
| Msa0633750 | Msa1014270 | 0.823975 | 1.037017e-53 | -8.615850e-47 |
| Msa0633750 | Msa1018790 | 0.818352 | 2.049800e-52 | -8.615850e-47 |
| Msa0633750 | Msa1022650 | 0.803824 | 2.898410e-49 | -8.615850e-47 |
| Msa0633750 | Msa1027790 | 0.853277 | 2.658070e-61 | -8.615850e-47 |
| Msa0633750 | Msa1028460 | 0.812662 | 3.787733e-51 | -8.615850e-47 |
| Msa0633750 | Msa1045880 | 0.818068 | 2.376820e-52 | -8.615850e-47 |
| Msa0633750 | Msa1045970 | 0.821506 | 3.894752e-53 | -8.615850e-47 |
| Msa0633750 | Msa1046870 | 0.833296 | 5.785449e-56 | -8.615850e-47 |
| Msa0633750 | Msa1061180 | 0.804406 | 2.193970e-49 | -8.615850e-47 |
| Msa0633750 | Msa1072080 | 0.810132 | 1.342164e-50 | -8.615850e-47 |
| Msa0633750 | Msa1106560 | 0.820964 | 5.191234e-53 | -8.615850e-47 |
| Msa0633750 | Msa1106580 | 0.836312 | 1.007658e-56 | -8.615850e-47 |
| Msa0633750 | Msa1107440 | 0.806996 | 6.272060e-50 | -8.615850e-47 |
| Msa0633750 | Msa1112610 | 0.854916 | 8.949968e-62 | -8.615850e-47 |
| Msa0633750 | Msa1125780 | 0.802912 | 4.478415e-49 | -8.615850e-47 |
| Msa0633750 | Msa1125950 | 0.806165 | 9.390041e-50 | -8.615850e-47 |
| Msa0633750 | Msa1127140 | 0.800707 | 1.270205e-48 | -8.615850e-47 |
| Msa0633750 | Msa1134400 | 0.832359 | 9.887860e-56 | -8.615850e-47 |
| Msa0633750 | Msa1150970 | 0.821111 | 4.802699e-53 | -8.615850e-47 |
| Msa0633750 | Msa1159100 | 0.825905 | 3.633166e-54 | -8.615850e-47 |
| Msa0633750 | Msa1171340 | 0.816301 | 5.934707e-52 | -8.615850e-47 |
| Msa0633750 | Msa1175750 | 0.816347 | 5.796731e-52 | -8.615850e-47 |
| Msa0633750 | Msa1183390 | 0.808118 | 3.623940e-50 | -8.615850e-47 |
| Msa0633750 | Msa1183610 | 0.814588 | 1.426936e-51 | -8.615850e-47 |
| Msa0633750 | Msa1197110 | 0.826447 | 2.699026e-54 | -8.615850e-47 |
| Msa0633750 | Msa1200920 | 0.845496 | 3.915828e-59 | -8.615850e-47 |
| Msa0633750 | Msa1219250 | 0.825958 | 3.528429e-54 | -8.615850e-47 |
| Msa0633750 | Msa1223840 | 0.815134 | 1.080283e-51 | -8.615850e-47 |
| Msa0633750 | Msa1229700 | 0.829436 | 5.154655e-55 | -8.615850e-47 |
| Msa0633750 | Msa1232860 | 0.812117 | 4.982042e-51 | -8.615850e-47 |
| Msa0633750 | Msa1235890 | 0.815498 | 8.963464e-52 | -8.615850e-47 |
| Msa0633750 | Msa1237030 | 0.815297 | 9.937502e-52 | -8.615850e-47 |
| Msa0633750 | Msa1241680 | 0.836007 | 1.204424e-56 | -8.615850e-47 |
| Msa0633750 | Msa1263030 | 0.806548 | 7.798322e-50 | -8.615850e-47 |
| Msa0633750 | Msa1271510 | 0.817476 | 3.233894e-52 | -8.615850e-47 |
| Msa0633750 | Msa1271600 | 0.821387 | 4.149316e-53 | -8.615850e-47 |
| Msa0633750 | Msa1272330 | 0.840616 | 7.812589e-58 | -8.615850e-47 |
| Msa0633750 | Msa1307370 | 0.822456 | 2.346375e-53 | -8.615850e-47 |
| Msa0633750 | Msa1310290 | 0.822008 | 2.980069e-53 | -8.615850e-47 |
| Msa0633750 | Msa1315980 | 0.840320 | 9.336146e-58 | -8.615850e-47 |
| Msa0633750 | Msa1323060 | 0.801640 | 8.186781e-49 | -8.615850e-47 |
| Msa0633750 | Msa1350670 | 0.808627 | 2.821756e-50 | -8.615850e-47 |
| Msa0633750 | Msa1354040 | 0.819912 | 9.050000e-53 | -8.615850e-47 |
| Msa0633750 | Msa1355400 | 0.818060 | 2.387245e-52 | -8.615850e-47 |
| Msa0633750 | Msa1365020 | 0.851060 | 1.134617e-60 | -8.615850e-47 |
| Msa0633750 | Msa1365870 | 0.832855 | 7.450694e-56 | -8.615850e-47 |
| Msa0633750 | Msa1367410 | 0.838551 | 2.688260e-57 | -8.615850e-47 |
| Msa0633750 | Msa1367940 | 0.803172 | 3.957325e-49 | -8.615850e-47 |
| Msa0633750 | Msa1373510 | 0.816836 | 4.504404e-52 | -8.615850e-47 |
| Msa0633750 | Msa1379980 | 0.825319 | 5.001251e-54 | -8.615850e-47 |
| Msa0633750 | Msa1381130 | 0.803919 | 2.769607e-49 | -8.615850e-47 |
| Msa0633750 | Msa1382310 | 0.806526 | 7.881024e-50 | -8.615850e-47 |
| Msa0633750 | Msa1391590 | 0.807509 | 4.881394e-50 | -8.615850e-47 |
| Msa0633750 | Msa1398840 | 0.808345 | 3.242297e-50 | -8.615850e-47 |
| Msa0633750 | Msa1405770 | 0.842026 | 3.323482e-58 | -8.615850e-47 |
| Msa0633750 | Msa1417650 | 0.844755 | 6.209998e-59 | -8.615850e-47 |
| Msa0633750 | Msa1418620 | 0.804769 | 1.842187e-49 | -8.615850e-47 |
| Msa0633750 | Msa1421810 | 0.805282 | 1.439241e-49 | -8.615850e-47 |
| Msa0633750 | Msa1434020 | 0.836076 | 1.156447e-56 | -8.615850e-47 |
| Msa0633750 | Msa1439670 | 0.815681 | 8.160843e-52 | -8.615850e-47 |
| Msa0633750 | Msa1439680 | 0.802395 | 5.724981e-49 | -8.615850e-47 |
| Msa0633750 | Msa1455660 | 0.800411 | 1.459314e-48 | -8.615850e-47 |
| Msa0633750 | Msa1456650 | 0.808453 | 3.073609e-50 | -8.615850e-47 |
| Msa0125280 | Msa0633750 | 0.813059 | 3.099952e-51 | -8.615850e-47 |
| Msa0125580 | Msa0633750 | 0.802220 | 6.219650e-49 | -8.615850e-47 |
| Msa0135980 | Msa0633750 | 0.850445 | 1.690354e-60 | -8.615850e-47 |
| Msa0137030 | Msa0633750 | 0.800750 | 1.244700e-48 | -8.615850e-47 |
| Msa0137600 | Msa0633750 | 0.828053 | 1.113086e-54 | -8.615850e-47 |
| Msa0139900 | Msa0633750 | 0.832269 | 1.040865e-55 | -8.615850e-47 |
| Msa0141670 | Msa0633750 | 0.808962 | 2.393086e-50 | -8.615850e-47 |
| Msa0141830 | Msa0633750 | 0.824300 | 8.699028e-54 | -8.615850e-47 |
| Msa0143970 | Msa0633750 | 0.810002 | 1.431272e-50 | -8.615850e-47 |
| Msa0146470 | Msa0633750 | 0.845399 | 4.161888e-59 | -8.615850e-47 |
| Msa0150210 | Msa0633750 | 0.836085 | 1.150822e-56 | -8.615850e-47 |
| Msa0157020 | Msa0633750 | 0.831793 | 1.364932e-55 | -8.615850e-47 |
| Msa0157350 | Msa0633750 | 0.812705 | 3.706176e-51 | -8.615850e-47 |
| Msa0177280 | Msa0633750 | 0.807095 | 5.976080e-50 | -8.615850e-47 |
| Msa0182270 | Msa0633750 | 0.833876 | 4.145906e-56 | -8.615850e-47 |
| Msa0183620 | Msa0633750 | 0.810608 | 1.059424e-50 | -8.615850e-47 |
| Msa0185390 | Msa0633750 | 0.806011 | 1.011871e-49 | -8.615850e-47 |
| Msa0203520 | Msa0633750 | 0.847585 | 1.053791e-59 | -8.615850e-47 |
| Msa0206080 | Msa0633750 | 0.810358 | 1.199427e-50 | -8.615850e-47 |
| Msa0207000 | Msa0633750 | 0.800888 | 1.166803e-48 | -8.615850e-47 |
| Msa0223390 | Msa0633750 | 0.803594 | 3.235442e-49 | -8.615850e-47 |
| Msa0230400 | Msa0633750 | 0.821214 | 4.548357e-53 | -8.615850e-47 |
| Msa0367370 | Msa0633750 | 0.811012 | 8.660150e-51 | -8.615850e-47 |
| Msa0370600 | Msa0633750 | 0.816454 | 5.485908e-52 | -8.615850e-47 |
| Msa0380060 | Msa0633750 | 0.833062 | 6.615298e-56 | -8.615850e-47 |
| Msa0398590 | Msa0633750 | 0.837215 | 5.929403e-57 | -8.615850e-47 |
| Msa0408640 | Msa0633750 | 0.827268 | 1.717991e-54 | -8.615850e-47 |
| Msa0417630 | Msa0633750 | 0.842262 | 2.878652e-58 | -8.615850e-47 |
| Msa0418200 | Msa0633750 | 0.813690 | 2.252382e-51 | -8.615850e-47 |
| Msa0429270 | Msa0633750 | 0.839827 | 1.255028e-57 | -8.615850e-47 |
| Msa0436450 | Msa0633750 | 0.824751 | 6.811395e-54 | -8.615850e-47 |
| Msa0439780 | Msa0633750 | 0.823204 | 1.571141e-53 | -8.615850e-47 |
| Msa0457870 | Msa0633750 | 0.823440 | 1.383498e-53 | -8.615850e-47 |
| Msa0464540 | Msa0633750 | 0.821940 | 3.090489e-53 | -8.615850e-47 |
| Msa0464630 | Msa0633750 | 0.804109 | 2.528751e-49 | -8.615850e-47 |
| Msa0472380 | Msa0633750 | 0.809599 | 1.747709e-50 | -8.615850e-47 |
| Msa0246690 | Msa0633750 | 0.841337 | 5.051648e-58 | -8.615850e-47 |
| Msa0249270 | Msa0633750 | 0.828404 | 9.159800e-55 | -8.615850e-47 |
| Msa0257310 | Msa0633750 | 0.848719 | 5.122611e-60 | -8.615850e-47 |
| Msa0274780 | Msa0633750 | 0.822005 | 2.985785e-53 | -8.615850e-47 |
| Msa0351510 | Msa0633750 | 0.814827 | 1.263347e-51 | -8.615850e-47 |
| Msa0361260 | Msa0633750 | 0.835565 | 1.558021e-56 | -8.615850e-47 |
| Msa0485280 | Msa0633750 | 0.811048 | 8.507071e-51 | -8.615850e-47 |
| Msa0508400 | Msa0633750 | 0.815486 | 9.017800e-52 | -8.615850e-47 |
| Msa0510230 | Msa0633750 | 0.814460 | 1.523367e-51 | -8.615850e-47 |
| Msa0510440 | Msa0633750 | 0.830855 | 2.321525e-55 | -8.615850e-47 |
| Msa0519200 | Msa0633750 | 0.837375 | 5.393715e-57 | -8.615850e-47 |
| Msa0524090 | Msa0633750 | 0.813262 | 2.798605e-51 | -8.615850e-47 |
| Msa0524120 | Msa0633750 | 0.803360 | 3.618448e-49 | -8.615850e-47 |
| Msa0524210 | Msa0633750 | 0.840362 | 9.101009e-58 | -8.615850e-47 |
| Msa0526130 | Msa0633750 | 0.820903 | 5.362951e-53 | -8.615850e-47 |
| Msa0528940 | Msa0633750 | 0.813001 | 3.191826e-51 | -8.615850e-47 |
| Msa0532840 | Msa0633750 | 0.841463 | 4.681009e-58 | -8.615850e-47 |
| Msa0533010 | Msa0633750 | 0.838080 | 3.556972e-57 | -8.615850e-47 |
| Msa0537270 | Msa0633750 | 0.934058 | 7.262923e-96 | -8.615850e-47 |
| Msa0538570 | Msa0633750 | 0.850810 | 1.334916e-60 | -8.615850e-47 |
| Msa0543850 | Msa0633750 | 0.812692 | 3.731504e-51 | -8.615850e-47 |
| Msa0544220 | Msa0633750 | 0.809283 | 2.043197e-50 | -8.615850e-47 |
| Msa0546740 | Msa0633750 | 0.817994 | 2.470370e-52 | -8.615850e-47 |
| Msa0547050 | Msa0633750 | 0.820880 | 5.428865e-53 | -8.615850e-47 |
| Msa0561510 | Msa0633750 | 0.816428 | 5.558517e-52 | -8.615850e-47 |
| Msa0567290 | Msa0633750 | 0.804953 | 1.686071e-49 | -8.615850e-47 |
| Msa0581460 | Msa0633750 | 0.807733 | 4.376246e-50 | -8.615850e-47 |
| Msa0593710 | Msa0633750 | 0.960407 | 1.598044e-118 | -8.615850e-47 |
| Msa0594390 | Msa0633750 | 0.848042 | 7.886016e-60 | -8.615850e-47 |
| Msa0599690 | Msa0633750 | 0.812160 | 4.875947e-51 | -8.615850e-47 |
| Msa0600390 | Msa0633750 | 0.814554 | 1.452393e-51 | -8.615850e-47 |
| Msa0601110 | Msa0633750 | 0.841122 | 5.754257e-58 | -8.615850e-47 |
| Msa0601120 | Msa0633750 | 0.840139 | 1.041018e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633750 | MtrunA17_Chr4g0011841 | 82.090 | 268 | 1 | 1 | 1 | 268 | 1 | 221 | 1.61e-158 | 439 |
| Msa0633750 | MtrunA17_Chr4g0056521 | 54.688 | 256 | 61 | 8 | 18 | 268 | 13 | 218 | 9.71e-82 | 244 |
| Msa0633750 | MtrunA17_Chr5g0413381 | 38.537 | 205 | 71 | 6 | 23 | 226 | 12 | 162 | 8.17e-37 | 129 |
| Msa0633750 | MtrunA17_Chr4g0063931 | 73.973 | 73 | 17 | 1 | 181 | 253 | 113 | 183 | 1.83e-30 | 112 |
| Msa0633750 | MtrunA17_Chr4g0063931 | 72.917 | 48 | 13 | 0 | 20 | 67 | 11 | 58 | 1.12e-18 | 81.6 |
| Msa0633750 | MtrunA17_Chr2g0322221 | 69.620 | 79 | 21 | 2 | 181 | 258 | 119 | 195 | 5.17e-30 | 111 |
| Msa0633750 | MtrunA17_Chr2g0322221 | 62.295 | 61 | 21 | 1 | 19 | 77 | 8 | 68 | 4.23e-19 | 82.8 |
| Msa0633750 | MtrunA17_Chr4g0025361 | 92.000 | 50 | 4 | 0 | 182 | 231 | 108 | 157 | 3.88e-27 | 103 |
| Msa0633750 | MtrunA17_Chr4g0025361 | 69.565 | 46 | 14 | 0 | 22 | 67 | 8 | 53 | 4.49e-17 | 77.0 |
| Msa0633750 | MtrunA17_Chr5g0419871 | 68.000 | 50 | 16 | 0 | 176 | 225 | 106 | 155 | 6.92e-16 | 73.6 |
| Msa0633750 | MtrunA17_Chr5g0419871 | 65.957 | 47 | 15 | 1 | 21 | 66 | 14 | 60 | 4.20e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633750 | AT2G45190.1 | 57.529 | 259 | 53 | 7 | 19 | 268 | 19 | 229 | 1.32e-85 | 255 |
| Msa0633750 | AT4G00180.1 | 52.222 | 270 | 74 | 12 | 8 | 266 | 13 | 238 | 9.01e-73 | 223 |
| Msa0633750 | AT4G00180.2 | 50.202 | 247 | 71 | 10 | 32 | 266 | 1 | 207 | 3.45e-60 | 190 |
| Msa0633750 | AT2G45190.2 | 51.174 | 213 | 47 | 7 | 65 | 268 | 1 | 165 | 2.34e-55 | 176 |
| Msa0633750 | AT1G23420.1 | 40.580 | 207 | 76 | 5 | 24 | 229 | 20 | 180 | 6.28e-34 | 123 |
| Msa0633750 | AT1G23420.2 | 38.647 | 207 | 80 | 3 | 24 | 229 | 51 | 211 | 2.20e-33 | 122 |
| Msa0633750 | AT2G26580.2 | 92.453 | 53 | 4 | 0 | 181 | 233 | 102 | 154 | 6.85e-30 | 110 |
| Msa0633750 | AT2G26580.2 | 67.273 | 55 | 16 | 1 | 22 | 74 | 8 | 62 | 5.86e-19 | 82.0 |
| Msa0633750 | AT2G26580.1 | 92.453 | 53 | 4 | 0 | 181 | 233 | 102 | 154 | 6.85e-30 | 110 |
| Msa0633750 | AT2G26580.1 | 67.273 | 55 | 16 | 1 | 22 | 74 | 8 | 62 | 5.86e-19 | 82.0 |
| Msa0633750 | AT1G08465.1 | 89.091 | 55 | 6 | 0 | 181 | 235 | 109 | 163 | 6.69e-29 | 108 |
| Msa0633750 | AT1G08465.1 | 68.750 | 48 | 15 | 0 | 22 | 69 | 7 | 54 | 1.50e-16 | 75.9 |
| Msa0633750 | AT1G69180.1 | 72.000 | 50 | 14 | 0 | 176 | 225 | 107 | 156 | 1.02e-19 | 84.3 |
Find 82 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCAAGTTGTTAGTTTA+TGG | 0.092458 | 4_3:-19807290 | Msa0633750:three_prime_UTR |
| CTATTAGCAGGTGGAGGTTT+AGG | 0.195251 | 4_3:+19809496 | None:intergenic |
| CGATGCTACTTAAGTATTAA+AGG | 0.214516 | 4_3:+19810584 | None:intergenic |
| AAAATGGACAGAAGGGTTTC+AGG | 0.243936 | 4_3:+19809239 | None:intergenic |
| CTTCAATCCTCAAACTCTTA+TGG | 0.288001 | 4_3:-19809982 | Msa0633750:intron |
| CACTTTCCACACATTCATTT+CGG | 0.297543 | 4_3:-19807691 | Msa0633750:CDS |
| ATCATCAAATCATTTGGATT+TGG | 0.304994 | 4_3:+19809553 | None:intergenic |
| AGAGTTGTTGCTGTTGTTGC+TGG | 0.315337 | 4_3:+19810302 | None:intergenic |
| AACTCAAAAGAAGTGTAAAA+TGG | 0.322593 | 4_3:+19809223 | None:intergenic |
| AAAGAAGGAAAAGACTTTCT+AGG | 0.330189 | 4_3:-19810619 | Msa0633750:five_prime_UTR |
| TATTAGCAGGTGGAGGTTTA+GGG | 0.330394 | 4_3:+19809497 | None:intergenic |
| GCCTCTCTGTGGCTTATATC+AGG | 0.334060 | 4_3:+19807923 | None:intergenic |
| GACTGATCAGTGAAGTTTCT+TGG | 0.340647 | 4_3:+19810443 | None:intergenic |
| TTCTTCACGGGTTGATGATC+AGG | 0.349751 | 4_3:+19807661 | None:intergenic |
| AACAAACACACTTCTTTAGT+AGG | 0.360387 | 4_3:+19807426 | None:intergenic |
| GTGTTCATCATCAAATCATT+TGG | 0.376681 | 4_3:+19809547 | None:intergenic |
| CTCTGTCTCTTCTCCGGAGC+TGG | 0.379617 | 4_3:+19808527 | None:intergenic |
| TGTCCAAGGTGAAGTTGATT+TGG | 0.407277 | 4_3:+19810011 | None:intergenic |
| TGATTGTTAAGTTACTGTTT+AGG | 0.410029 | 4_3:+19810519 | None:intergenic |
| TGTTGCTGTTGTTGCTGGTC+CGG | 0.423782 | 4_3:+19810307 | None:intergenic |
| GAGGACGTGCTTATGAAAGA+TGG | 0.432558 | 4_3:-19807481 | Msa0633750:CDS |
| TGTGTTTGCTTGTCCAGCTC+CGG | 0.447943 | 4_3:-19808540 | Msa0633750:CDS |
| AGATAGATATAAACTTCATA+TGG | 0.453137 | 4_3:+19810484 | None:intergenic |
| GGAGATAAATATGAAAGAAA+AGG | 0.454485 | 4_3:+19810546 | None:intergenic |
| ACTGATCAGTGAAGTTTCTT+GGG | 0.455223 | 4_3:+19810444 | None:intergenic |
| TTCATCATCATGTTTGTTGA+AGG | 0.455442 | 4_3:+19809583 | None:intergenic |
| AATTTCTTACGTCTATTAGC+AGG | 0.457462 | 4_3:+19809484 | None:intergenic |
| ACACATACCATAAGAGTTTG+AGG | 0.470299 | 4_3:+19809975 | None:intergenic |
| GAGATCCAACGTATCAAAGC+TGG | 0.478771 | 4_3:-19807950 | Msa0633750:CDS |
| TGTTAAGTTACTGTTTAGGA+AGG | 0.483028 | 4_3:+19810523 | None:intergenic |
| TTAGTTTATGGTATAATGAA+TGG | 0.494225 | 4_3:-19807278 | Msa0633750:three_prime_UTR |
| GAAGAAAGCTAATGTTCGTC+AGG | 0.494623 | 4_3:-19807644 | Msa0633750:intron |
| CGAACATTAGCTTTCTTCAC+GGG | 0.494923 | 4_3:+19807649 | None:intergenic |
| ACAAACACACTTCTTTAGTA+GGG | 0.496640 | 4_3:+19807427 | None:intergenic |
| TAAAATAAAATATCAGCAAA+GGG | 0.497061 | 4_3:-19810644 | None:intergenic |
| GGAACTCTCTGTCTCTTCTC+CGG | 0.501243 | 4_3:+19808521 | None:intergenic |
| CGAAATGAATGTGTGGAAAG+TGG | 0.502844 | 4_3:+19807692 | None:intergenic |
| TTGTTGCTGGTCCGGTGAAA+AGG | 0.508490 | 4_3:+19810315 | None:intergenic |
| TTAAGTTACTGTTTAGGAAG+GGG | 0.512648 | 4_3:+19810525 | None:intergenic |
| GGTATAATGAATGGTGGGAG+AGG | 0.513224 | 4_3:-19807269 | Msa0633750:three_prime_UTR |
| AGGTGAAGTTGATTTGGAGC+AGG | 0.517398 | 4_3:+19810017 | None:intergenic |
| ATAAAATAAAATATCAGCAA+AGG | 0.517986 | 4_3:-19810645 | None:intergenic |
| ACAGCAACAACTCTCTCCTT+CGG | 0.518591 | 4_3:-19810293 | Msa0633750:CDS |
| CCATAAACTAACAACTTGAA+AGG | 0.521568 | 4_3:+19807290 | None:intergenic |
| TGCAATGGACATAACAAAGC+TGG | 0.526911 | 4_3:+19810269 | None:intergenic |
| ATTAAACTTACTTGATGAAG+CGG | 0.531165 | 4_3:+19808486 | None:intergenic |
| AGAAGTGTAAAATGGACAGA+AGG | 0.532218 | 4_3:+19809231 | None:intergenic |
| ACGAACATTAGCTTTCTTCA+CGG | 0.533864 | 4_3:+19807648 | None:intergenic |
| GATGCTATCATGGGAAAGGT+AGG | 0.538583 | 4_3:-19809280 | Msa0633750:CDS |
| GTTAAGTTACTGTTTAGGAA+GGG | 0.540423 | 4_3:+19810524 | None:intergenic |
| TTACGTCTATTAGCAGGTGG+AGG | 0.545636 | 4_3:+19809490 | None:intergenic |
| GTTTATGGTATAATGAATGG+TGG | 0.545874 | 4_3:-19807275 | Msa0633750:three_prime_UTR |
| CTGGTCCGGTGAAAAGGAAG+TGG | 0.549720 | 4_3:+19810321 | None:intergenic |
| AGGACGTGCTTATGAAAGAT+GGG | 0.553995 | 4_3:-19807480 | Msa0633750:CDS |
| GAAGTGTAAAATGGACAGAA+GGG | 0.554672 | 4_3:+19809232 | None:intergenic |
| TTTCATTGTGTAGGATTCAG+AGG | 0.560695 | 4_3:-19807500 | Msa0633750:intron |
| ATGAAGCGGTTGTAAGCAGA+TGG | 0.561893 | 4_3:+19808500 | None:intergenic |
| TTCTTACGTCTATTAGCAGG+TGG | 0.566691 | 4_3:+19809487 | None:intergenic |
| GATTCCCAGCTTTGATACGT+TGG | 0.580008 | 4_3:+19807945 | None:intergenic |
| TTTATGGTATAATGAATGGT+GGG | 0.581326 | 4_3:-19807274 | Msa0633750:three_prime_UTR |
| GAAGTTGATTTGGAGCAGGA+AGG | 0.583401 | 4_3:+19810021 | None:intergenic |
| ACAGTAACTTAACAATCAAG+AGG | 0.585860 | 4_3:-19810514 | Msa0633750:five_prime_UTR |
| AAAGGAAGTGGATGATGAAG+AGG | 0.587043 | 4_3:+19810333 | None:intergenic |
| TATCAGCAAAGGGAGAAAGA+AGG | 0.589220 | 4_3:-19810634 | Msa0633750:five_prime_UTR |
| GCTCCAAATCAACTTCACCT+TGG | 0.591195 | 4_3:-19810014 | Msa0633750:CDS |
| AGATCCAACGTATCAAAGCT+GGG | 0.600203 | 4_3:-19807949 | Msa0633750:CDS |
| GAAATGAATGTGTGGAAAGT+GGG | 0.615090 | 4_3:+19807693 | None:intergenic |
| ATGATGAACACAATGAGAGG+AGG | 0.619560 | 4_3:-19809535 | Msa0633750:CDS |
| CACGCATGTTAACTGAGAGA+AGG | 0.621310 | 4_3:+19810051 | None:intergenic |
| CATGTTAACTGAGAGAAGGT+TGG | 0.622869 | 4_3:+19810055 | None:intergenic |
| TGATGAACACAATGAGAGGA+GGG | 0.625320 | 4_3:-19809534 | Msa0633750:CDS |
| ACATAACAAAGCTGGTCCGA+AGG | 0.642303 | 4_3:+19810277 | None:intergenic |
| GATTGAAGTAAGTGTGTCCA+AGG | 0.648511 | 4_3:+19809997 | None:intergenic |
| GTCTTGAACAAACTTGTGCA+AGG | 0.649953 | 4_3:+19810104 | None:intergenic |
| CAGTGTCACAGAAATTGCAA+TGG | 0.650774 | 4_3:+19810254 | None:intergenic |
| GAGCTGGACAAGCAAACACA+CGG | 0.654645 | 4_3:+19808543 | None:intergenic |
| TTTCTGTGACACTGTTCTCG+CGG | 0.670363 | 4_3:-19810245 | Msa0633750:intron |
| CTGCACTAAAAGCCTCTCTG+TGG | 0.673003 | 4_3:+19807912 | None:intergenic |
| AAGACTGTGACAGTGAGATG+TGG | 0.685505 | 4_3:-19810086 | Msa0633750:CDS |
| TTGATGATGAACACAATGAG+AGG | 0.686722 | 4_3:-19809538 | Msa0633750:CDS |
| TCCTGATATAAGCCACAGAG+AGG | 0.691291 | 4_3:-19807924 | Msa0633750:CDS |
| ATAAGTCCGAAATGAATGTG+TGG | 0.723401 | 4_3:+19807685 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAATTTTTAATTTTTAT+TGG | - | chr4_3:19810099-19810118 | Msa0633750:CDS | 0.0% |
| !!! | TATAATTTTTAATTTTTATT+GGG | - | chr4_3:19810100-19810119 | Msa0633750:CDS | 0.0% |
| !! | ATCTTAACTATTAATTAAAA+GGG | + | chr4_3:19807729-19807748 | None:intergenic | 10.0% |
| !! | AATCTTAACTATTAATTAAA+AGG | + | chr4_3:19807730-19807749 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTGTTTTTCTT+AGG | - | chr4_3:19807763-19807782 | Msa0633750:intron | 10.0% |
| !! | GATAAATTCTTTAAATATTA+GGG | + | chr4_3:19809511-19809530 | None:intergenic | 10.0% |
| !! | TGATAAATTCTTTAAATATT+AGG | + | chr4_3:19809512-19809531 | None:intergenic | 10.0% |
| !!! | ACATAAACATTTTTATTTTT+TGG | - | chr4_3:19809576-19809595 | Msa0633750:CDS | 10.0% |
| !!! | TTCTTTTTACTAATTAAAAA+TGG | - | chr4_3:19809709-19809728 | Msa0633750:intron | 10.0% |
| !!! | AATTGAAAATAATCTAAAAT+GGG | + | chr4_3:19810069-19810088 | None:intergenic | 10.0% |
| !! | AAATTGAAAATAATCTAAAA+TGG | + | chr4_3:19810070-19810089 | None:intergenic | 10.0% |
| !!! | TTTTTCATTTTTTTTTCTTT+TGG | - | chr4_3:19810316-19810335 | Msa0633750:CDS | 10.0% |
| !! | TTGAAGATTTGTAAATTTAA+TGG | - | chr4_3:19808077-19808096 | Msa0633750:intron | 15.0% |
| !!! | TGTAAATTTAATGGATTATT+TGG | - | chr4_3:19808086-19808105 | Msa0633750:intron | 15.0% |
| !! | ATCAATTTATGAAATTATCT+AGG | - | chr4_3:19808124-19808143 | Msa0633750:intron | 15.0% |
| !!! | TGTTTTGTATTTTTGTATTT+TGG | - | chr4_3:19808188-19808207 | Msa0633750:intron | 15.0% |
| !!! | ATTTTTGTATTTTGGAAATT+AGG | - | chr4_3:19808196-19808215 | Msa0633750:intron | 15.0% |
| !! | GGTTTAATTAATTATTATTC+AGG | - | chr4_3:19808275-19808294 | Msa0633750:intron | 15.0% |
| !! | TTAATTAATTATTATTCAGG+AGG | - | chr4_3:19808278-19808297 | Msa0633750:intron | 15.0% |
| !! | CTCTAATTTGAAAATAATAT+TGG | + | chr4_3:19808940-19808959 | None:intergenic | 15.0% |
| !!! | TTTTTTGATAAAGAAAATGT+TGG | + | chr4_3:19808975-19808994 | None:intergenic | 15.0% |
| !!! | CATTTTCTTTATCAAAAAAT+TGG | - | chr4_3:19808976-19808995 | Msa0633750:intron | 15.0% |
| !!! | CATTCATTTTAAGTTATTTT+TGG | - | chr4_3:19809437-19809456 | Msa0633750:intron | 15.0% |
| !! | TTTAGTATATCAATTGTATT+TGG | - | chr4_3:19809645-19809664 | Msa0633750:intron | 15.0% |
| !! | ATTTGGAGAAAATATTATAA+TGG | - | chr4_3:19809662-19809681 | Msa0633750:intron | 15.0% |
| !! | TTTACTAATTAAAAATGGTA+TGG | - | chr4_3:19809714-19809733 | Msa0633750:intron | 15.0% |
| !! | AAGAAAAATAAATTCATATG+TGG | + | chr4_3:19809801-19809820 | None:intergenic | 15.0% |
| !!! | GATAATTCATTTAACTTTAA+TGG | - | chr4_3:19809838-19809857 | Msa0633750:intron | 15.0% |
| !!! | AAAATATGATTTGATTTTCA+GGG | - | chr4_3:19809923-19809942 | Msa0633750:intron | 15.0% |
| !! | AGATAGATATAAACTTCATA+TGG | + | chr4_3:19807417-19807436 | None:intergenic | 20.0% |
| !!! | GATTTTTTGATTTGATTGAT+GGG | + | chr4_3:19807484-19807503 | None:intergenic | 20.0% |
| !!! | TGATTTTTTGATTTGATTGA+TGG | + | chr4_3:19807485-19807504 | None:intergenic | 20.0% |
| !! | AAAAATCAAGAATTCAGAAA+AGG | - | chr4_3:19807497-19807516 | Msa0633750:intron | 20.0% |
| !!! | ATATATATATGTAGTTTGCT+TGG | + | chr4_3:19808047-19808066 | None:intergenic | 20.0% |
| !!! | TTTGTTGATTATGAGAAATT+TGG | - | chr4_3:19808254-19808273 | Msa0633750:intron | 20.0% |
| !!! | TTTTGCTTTTGTACATTAAT+TGG | + | chr4_3:19808719-19808738 | None:intergenic | 20.0% |
| !! | AAAAAAGAGAAGGAAAAAAA+AGG | - | chr4_3:19808735-19808754 | Msa0633750:intron | 20.0% |
| !! | AAAGAAAATGTTGGAAATTA+GGG | + | chr4_3:19808966-19808985 | None:intergenic | 20.0% |
| !! | TAAAGAAAATGTTGGAAATT+AGG | + | chr4_3:19808967-19808986 | None:intergenic | 20.0% |
| !! | TACTTCAAACTATTTACAAA+AGG | - | chr4_3:19809052-19809071 | Msa0633750:intron | 20.0% |
| !! | CACATAGAGTAAAAAAAAAA+AGG | + | chr4_3:19809113-19809132 | None:intergenic | 20.0% |
| !!! | TGCTAAACATTTTGTTATTA+CGG | - | chr4_3:19809773-19809792 | Msa0633750:intron | 20.0% |
| !!! | AATCAAATCATATTTTGTCA+AGG | + | chr4_3:19809919-19809938 | None:intergenic | 20.0% |
| !!! | CAAAATATGATTTGATTTTC+AGG | - | chr4_3:19809922-19809941 | Msa0633750:intron | 20.0% |
| !!! | TGTATTATTTTCTCATTTGT+GGG | - | chr4_3:19810158-19810177 | Msa0633750:intron | 20.0% |
| !! | TTAGTTTATGGTATAATGAA+TGG | - | chr4_3:19810620-19810639 | Msa0633750:five_prime_UTR | 20.0% |
| ! | GGAGATAAATATGAAAGAAA+AGG | + | chr4_3:19807355-19807374 | None:intergenic | 25.0% |
| ! | TGATTGTTAAGTTACTGTTT+AGG | + | chr4_3:19807382-19807401 | None:intergenic | 25.0% |
| ! | CAAAAATACAAAACAACCAT+AGG | + | chr4_3:19808183-19808202 | None:intergenic | 25.0% |
| !!! | TATACAACTATCTTTTGAGT+TGG | - | chr4_3:19808219-19808238 | Msa0633750:intron | 25.0% |
| ! | ATCATCAAATCATTTGGATT+TGG | + | chr4_3:19808348-19808367 | None:intergenic | 25.0% |
| !! | AACTCAAAAGAAGTGTAAAA+TGG | + | chr4_3:19808678-19808697 | None:intergenic | 25.0% |
| !!! | TTTTCAAGTGAGTTTTGATA+GGG | + | chr4_3:19808767-19808786 | None:intergenic | 25.0% |
| !!! | ATTTTCAAGTGAGTTTTGAT+AGG | + | chr4_3:19808768-19808787 | None:intergenic | 25.0% |
| ! | AGAGAAAACTTATAATGATG+AGG | - | chr4_3:19809226-19809245 | Msa0633750:CDS | 25.0% |
| ! | ATTAAACTTACTTGATGAAG+CGG | + | chr4_3:19809415-19809434 | None:intergenic | 25.0% |
| !!! | CAAGAGTACAACATTTTTTT+TGG | - | chr4_3:19809530-19809549 | Msa0633750:CDS | 25.0% |
| !!! | ACAACATTTTTTTTGGACAA+AGG | - | chr4_3:19809537-19809556 | Msa0633750:CDS | 25.0% |
| ! | AGTAAGATTCAGAATTTCAT+TGG | + | chr4_3:19810030-19810049 | None:intergenic | 25.0% |
| !! | AGTACACATTTTTATTGCAT+CGG | - | chr4_3:19810135-19810154 | Msa0633750:intron | 25.0% |
| !! | GTGTATTATTTTCTCATTTG+TGG | - | chr4_3:19810157-19810176 | Msa0633750:intron | 25.0% |
| !! | GTATTATTTTCTCATTTGTG+GGG | - | chr4_3:19810159-19810178 | Msa0633750:intron | 25.0% |
| !!! | TCCATTTATTTTCTTTCAGT+GGG | - | chr4_3:19810182-19810201 | Msa0633750:intron | 25.0% |
| !! | AAAGCATAACTCTTATTTCT+AGG | - | chr4_3:19810355-19810374 | Msa0633750:exon | 25.0% |
| !!! | AAGCATAACTCTTATTTCTA+GGG | - | chr4_3:19810356-19810375 | Msa0633750:exon | 25.0% |
| !! | CTACACAATGAAAGAATTTT+AGG | + | chr4_3:19810391-19810410 | None:intergenic | 25.0% |
| ! | CTAAAATTCTTTCATTGTGT+AGG | - | chr4_3:19810389-19810408 | Msa0633750:five_prime_UTR | 25.0% |
| !!! | TGTGTTTGTTTTATTGTGTA+GGG | - | chr4_3:19810485-19810504 | Msa0633750:five_prime_UTR | 25.0% |
| ! | TTTATGGTATAATGAATGGT+GGG | - | chr4_3:19810624-19810643 | Msa0633750:five_prime_UTR | 25.0% |
| AAAGAAGGAAAAGACTTTCT+AGG | - | chr4_3:19807279-19807298 | Msa0633750:three_prime_UTR | 30.0% | |
| ! | CGATGCTACTTAAGTATTAA+AGG | + | chr4_3:19807317-19807336 | None:intergenic | 30.0% |
| TTAAGTTACTGTTTAGGAAG+GGG | + | chr4_3:19807376-19807395 | None:intergenic | 30.0% | |
| GTTAAGTTACTGTTTAGGAA+GGG | + | chr4_3:19807377-19807396 | None:intergenic | 30.0% | |
| TGTTAAGTTACTGTTTAGGA+AGG | + | chr4_3:19807378-19807397 | None:intergenic | 30.0% | |
| ACAGTAACTTAACAATCAAG+AGG | - | chr4_3:19807384-19807403 | Msa0633750:three_prime_UTR | 30.0% | |
| ! | GTTTATAAAGAGAAAGTGTG+AGG | + | chr4_3:19807692-19807711 | None:intergenic | 30.0% |
| !! | GTTAATTTTTGTTGTGCCTA+TGG | - | chr4_3:19808164-19808183 | Msa0633750:intron | 30.0% |
| !!! | ACTATCTTTTGAGTTGGAAT+TGG | - | chr4_3:19808225-19808244 | Msa0633750:intron | 30.0% |
| !!! | TTTTGAGTTGGAATTGGAAA+GGG | - | chr4_3:19808231-19808250 | Msa0633750:intron | 30.0% |
| ! | TTCATCATCATGTTTGTTGA+AGG | + | chr4_3:19808318-19808337 | None:intergenic | 30.0% |
| GTGTTCATCATCAAATCATT+TGG | + | chr4_3:19808354-19808373 | None:intergenic | 30.0% | |
| AATTTCTTACGTCTATTAGC+AGG | + | chr4_3:19808417-19808436 | None:intergenic | 30.0% | |
| ! | AGATTCTTTTGATGCTATCA+TGG | - | chr4_3:19808608-19808627 | Msa0633750:intron | 30.0% |
| ! | GATTCTTTTGATGCTATCAT+GGG | - | chr4_3:19808609-19808628 | Msa0633750:intron | 30.0% |
| GTACAAAAGCAAAAAAGAGA+AGG | - | chr4_3:19808725-19808744 | Msa0633750:intron | 30.0% | |
| TTTCTTGATGTACTTCAAAG+TGG | - | chr4_3:19808799-19808818 | Msa0633750:intron | 30.0% | |
| AGAAACCCTATACAAAATCT+AGG | - | chr4_3:19808999-19809018 | Msa0633750:intron | 30.0% | |
| GAAACCCTATACAAAATCTA+GGG | - | chr4_3:19809000-19809019 | Msa0633750:intron | 30.0% | |
| ! | TTAGCCCTAGATTTTGTATA+GGG | + | chr4_3:19809007-19809026 | None:intergenic | 30.0% |
| ! | TTTAGCCCTAGATTTTGTAT+AGG | + | chr4_3:19809008-19809027 | None:intergenic | 30.0% |
| AAAAATAGAGCTGAATCCAT+TGG | - | chr4_3:19809188-19809207 | Msa0633750:intron | 30.0% | |
| TAATAACAATCACTCTCCAA+TGG | + | chr4_3:19809207-19809226 | None:intergenic | 30.0% | |
| ATTCTGAATCTTACTCTCTT+AGG | - | chr4_3:19810035-19810054 | Msa0633750:CDS | 30.0% | |
| !! | GTCCATTTATTTTCTTTCAG+TGG | - | chr4_3:19810181-19810200 | Msa0633750:intron | 30.0% |
| ! | TTTTTCACACAAGCAAATGT+AGG | - | chr4_3:19810441-19810460 | Msa0633750:five_prime_UTR | 30.0% |
| ACAAACACACTTCTTTAGTA+GGG | + | chr4_3:19810474-19810493 | None:intergenic | 30.0% | |
| AACAAACACACTTCTTTAGT+AGG | + | chr4_3:19810475-19810494 | None:intergenic | 30.0% | |
| !!! | GTGTGTTTGTTTTATTGTGT+AGG | - | chr4_3:19810484-19810503 | Msa0633750:five_prime_UTR | 30.0% |
| CCATAAACTAACAACTTGAA+AGG | + | chr4_3:19810611-19810630 | None:intergenic | 30.0% | |
| !! | CCTTTCAAGTTGTTAGTTTA+TGG | - | chr4_3:19810608-19810627 | Msa0633750:five_prime_UTR | 30.0% |
| GTTTATGGTATAATGAATGG+TGG | - | chr4_3:19810623-19810642 | Msa0633750:five_prime_UTR | 30.0% | |
| ACTGATCAGTGAAGTTTCTT+GGG | + | chr4_3:19807457-19807476 | None:intergenic | 35.0% | |
| CTTCAATCCTCAAACTCTTA+TGG | - | chr4_3:19807916-19807935 | Msa0633750:CDS | 35.0% | |
| ACACATACCATAAGAGTTTG+AGG | + | chr4_3:19807926-19807945 | None:intergenic | 35.0% | |
| AGTTGTCAGAGTTTGAATCT+CGG | - | chr4_3:19807994-19808013 | Msa0633750:intron | 35.0% | |
| !! | GCTGAAACACTTTTAAGAAG+AGG | + | chr4_3:19808021-19808040 | None:intergenic | 35.0% |
| !!! | CTTTTGAGTTGGAATTGGAA+AGG | - | chr4_3:19808230-19808249 | Msa0633750:intron | 35.0% |
| !! | TTGATGATGAACACAATGAG+AGG | - | chr4_3:19808360-19808379 | Msa0633750:intron | 35.0% |
| ACATGAGAAATGGTGAAGAA+GGG | + | chr4_3:19808541-19808560 | None:intergenic | 35.0% | |
| TACATGAGAAATGGTGAAGA+AGG | + | chr4_3:19808542-19808561 | None:intergenic | 35.0% | |
| AGCATAGCATACATGAGAAA+TGG | + | chr4_3:19808551-19808570 | None:intergenic | 35.0% | |
| ! | TTTTGATGCTATCATGGGAA+AGG | - | chr4_3:19808614-19808633 | Msa0633750:intron | 35.0% |
| GAAGTGTAAAATGGACAGAA+GGG | + | chr4_3:19808669-19808688 | None:intergenic | 35.0% | |
| ! | AGAAGTGTAAAATGGACAGA+AGG | + | chr4_3:19808670-19808689 | None:intergenic | 35.0% |
| !! | TGGATTCAGCTCTATTTTTC+CGG | + | chr4_3:19809187-19809206 | None:intergenic | 35.0% |
| ! | GAAAGAAGAGAGTTCTGATT+TGG | - | chr4_3:19809290-19809309 | Msa0633750:CDS | 35.0% |
| GCCCACTGAAAGAAAATAAA+TGG | + | chr4_3:19810186-19810205 | None:intergenic | 35.0% | |
| GAAATGAATGTGTGGAAAGT+GGG | + | chr4_3:19810208-19810227 | None:intergenic | 35.0% | |
| CACTTTCCACACATTCATTT+CGG | - | chr4_3:19810207-19810226 | Msa0633750:intron | 35.0% | |
| ATAAGTCCGAAATGAATGTG+TGG | + | chr4_3:19810216-19810235 | None:intergenic | 35.0% | |
| !! | ACGAACATTAGCTTTCTTCA+CGG | + | chr4_3:19810253-19810272 | None:intergenic | 35.0% |
| GGTAATATTGTAGCTAGCTA+GGG | + | chr4_3:19810291-19810310 | None:intergenic | 35.0% | |
| AGGTAATATTGTAGCTAGCT+AGG | + | chr4_3:19810292-19810311 | None:intergenic | 35.0% | |
| TTTCATTGTGTAGGATTCAG+AGG | - | chr4_3:19810398-19810417 | Msa0633750:five_prime_UTR | 35.0% | |
| TATCAGCAAAGGGAGAAAGA+AGG | - | chr4_3:19807264-19807283 | Msa0633750:three_prime_UTR | 40.0% | |
| GACTGATCAGTGAAGTTTCT+TGG | + | chr4_3:19807458-19807477 | None:intergenic | 40.0% | |
| AAAGGAAGTGGATGATGAAG+AGG | + | chr4_3:19807568-19807587 | None:intergenic | 40.0% | |
| ! | ATCATCCACTTCCTTTTCAC+CGG | - | chr4_3:19807572-19807591 | Msa0633750:intron | 40.0% |
| TGCAATGGACATAACAAAGC+TGG | + | chr4_3:19807632-19807651 | None:intergenic | 40.0% | |
| CAGTGTCACAGAAATTGCAA+TGG | + | chr4_3:19807647-19807666 | None:intergenic | 40.0% | |
| GTCTTGAACAAACTTGTGCA+AGG | + | chr4_3:19807797-19807816 | None:intergenic | 40.0% | |
| CATGTTAACTGAGAGAAGGT+TGG | + | chr4_3:19807846-19807865 | None:intergenic | 40.0% | |
| ! | TGTCCAAGGTGAAGTTGATT+TGG | + | chr4_3:19807890-19807909 | None:intergenic | 40.0% |
| GATTGAAGTAAGTGTGTCCA+AGG | + | chr4_3:19807904-19807923 | None:intergenic | 40.0% | |
| ATGATGAACACAATGAGAGG+AGG | - | chr4_3:19808363-19808382 | Msa0633750:intron | 40.0% | |
| TGATGAACACAATGAGAGGA+GGG | - | chr4_3:19808364-19808383 | Msa0633750:intron | 40.0% | |
| TATTAGCAGGTGGAGGTTTA+GGG | + | chr4_3:19808404-19808423 | None:intergenic | 40.0% | |
| TTCTTACGTCTATTAGCAGG+TGG | + | chr4_3:19808414-19808433 | None:intergenic | 40.0% | |
| AAAATGGACAGAAGGGTTTC+AGG | + | chr4_3:19808662-19808681 | None:intergenic | 40.0% | |
| !! | CAAGTGAGTTTTGATAGGGA+TGG | + | chr4_3:19808763-19808782 | None:intergenic | 40.0% |
| TCACTCAATGTTTGCATGCA+AGG | + | chr4_3:19809149-19809168 | None:intergenic | 40.0% | |
| !! | ATTCAGCTCTATTTTTCCGG+GGG | + | chr4_3:19809184-19809203 | None:intergenic | 40.0% |
| !! | GATTCAGCTCTATTTTTCCG+GGG | + | chr4_3:19809185-19809204 | None:intergenic | 40.0% |
| !! | GGATTCAGCTCTATTTTTCC+GGG | + | chr4_3:19809186-19809205 | None:intergenic | 40.0% |
| AGATCCAACGTATCAAAGCT+GGG | - | chr4_3:19809949-19809968 | Msa0633750:intron | 40.0% | |
| CGAAATGAATGTGTGGAAAG+TGG | + | chr4_3:19810209-19810228 | None:intergenic | 40.0% | |
| !! | CGAACATTAGCTTTCTTCAC+GGG | + | chr4_3:19810252-19810271 | None:intergenic | 40.0% |
| GAAGAAAGCTAATGTTCGTC+AGG | - | chr4_3:19810254-19810273 | Msa0633750:CDS | 40.0% | |
| AGGACGTGCTTATGAAAGAT+GGG | - | chr4_3:19810418-19810437 | Msa0633750:five_prime_UTR | 40.0% | |
| ! | AGAGTTGTTGCTGTTGTTGC+TGG | + | chr4_3:19807599-19807618 | None:intergenic | 45.0% |
| ACAGCAACAACTCTCTCCTT+CGG | - | chr4_3:19807605-19807624 | Msa0633750:intron | 45.0% | |
| ACATAACAAAGCTGGTCCGA+AGG | + | chr4_3:19807624-19807643 | None:intergenic | 45.0% | |
| TTTCTGTGACACTGTTCTCG+CGG | - | chr4_3:19807653-19807672 | Msa0633750:CDS | 45.0% | |
| AAGACTGTGACAGTGAGATG+TGG | - | chr4_3:19807812-19807831 | Msa0633750:intron | 45.0% | |
| CACGCATGTTAACTGAGAGA+AGG | + | chr4_3:19807850-19807869 | None:intergenic | 45.0% | |
| !! | GAAGTTGATTTGGAGCAGGA+AGG | + | chr4_3:19807880-19807899 | None:intergenic | 45.0% |
| !! | AGGTGAAGTTGATTTGGAGC+AGG | + | chr4_3:19807884-19807903 | None:intergenic | 45.0% |
| GCTCCAAATCAACTTCACCT+TGG | - | chr4_3:19807884-19807903 | Msa0633750:intron | 45.0% | |
| CTATTAGCAGGTGGAGGTTT+AGG | + | chr4_3:19808405-19808424 | None:intergenic | 45.0% | |
| TTACGTCTATTAGCAGGTGG+AGG | + | chr4_3:19808411-19808430 | None:intergenic | 45.0% | |
| GATGCTATCATGGGAAAGGT+AGG | - | chr4_3:19808618-19808637 | Msa0633750:intron | 45.0% | |
| ATGAAGCGGTTGTAAGCAGA+TGG | + | chr4_3:19809401-19809420 | None:intergenic | 45.0% | |
| GAGATCCAACGTATCAAAGC+TGG | - | chr4_3:19809948-19809967 | Msa0633750:intron | 45.0% | |
| ! | GATTCCCAGCTTTGATACGT+TGG | + | chr4_3:19809956-19809975 | None:intergenic | 45.0% |
| TCCTGATATAAGCCACAGAG+AGG | - | chr4_3:19809974-19809993 | Msa0633750:intron | 45.0% | |
| !! | TTCTTCACGGGTTGATGATC+AGG | + | chr4_3:19810240-19810259 | None:intergenic | 45.0% |
| GAGGACGTGCTTATGAAAGA+TGG | - | chr4_3:19810417-19810436 | Msa0633750:five_prime_UTR | 45.0% | |
| ! | GGTATAATGAATGGTGGGAG+AGG | - | chr4_3:19810629-19810648 | Msa0633750:five_prime_UTR | 45.0% |
| !!! | AGTATTTTTTTTAATTAATT+TGG | + | chr4_3:19808912-19808931 | None:intergenic | 5.0% |
| !!! | AAATTTATTCAAAATTTTTT+AGG | - | chr4_3:19809086-19809105 | Msa0633750:intron | 5.0% |
| !! | AAAAAAAAATGAAAAAAAAA+AGG | + | chr4_3:19810312-19810331 | None:intergenic | 5.0% |
| TTGTTGCTGGTCCGGTGAAA+AGG | + | chr4_3:19807586-19807605 | None:intergenic | 50.0% | |
| ! | TGTTGCTGTTGTTGCTGGTC+CGG | + | chr4_3:19807594-19807613 | None:intergenic | 50.0% |
| CATTGCTCAGGCAAACAGAC+AGG | + | chr4_3:19809334-19809353 | None:intergenic | 50.0% | |
| CAAACACACGGACATTGCTC+AGG | + | chr4_3:19809346-19809365 | None:intergenic | 50.0% | |
| GAGCTGGACAAGCAAACACA+CGG | + | chr4_3:19809358-19809377 | None:intergenic | 50.0% | |
| TGTGTTTGCTTGTCCAGCTC+CGG | - | chr4_3:19809358-19809377 | Msa0633750:intron | 50.0% | |
| GGAACTCTCTGTCTCTTCTC+CGG | + | chr4_3:19809380-19809399 | None:intergenic | 50.0% | |
| GCCTCTCTGTGGCTTATATC+AGG | + | chr4_3:19809978-19809997 | None:intergenic | 50.0% | |
| CTGCACTAAAAGCCTCTCTG+TGG | + | chr4_3:19809989-19810008 | None:intergenic | 50.0% | |
| CTGGTCCGGTGAAAAGGAAG+TGG | + | chr4_3:19807580-19807599 | None:intergenic | 55.0% | |
| GTGAGACAGAAGTCTTCCCC+CGG | - | chr4_3:19809165-19809184 | Msa0633750:intron | 55.0% | |
| CTCTGTCTCTTCTCCGGAGC+TGG | + | chr4_3:19809374-19809393 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 19807260 | 19810660 | 19807260 | ID=Msa0633750;Name=Msa0633750 |
| chr4_3 | mRNA | 19807260 | 19810660 | 19807260 | ID=Msa0633750-mRNA-1;Parent=Msa0633750;Name=Msa0633750-mRNA-1;_AED=0.19;_eAED=0.19;_QI=301|0.71|0.75|0.87|1|1|8|181|268 |
| chr4_3 | exon | 19807260 | 19807509 | 19807260 | ID=Msa0633750-mRNA-1:exon:5351;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19807645 | 19807719 | 19807645 | ID=Msa0633750-mRNA-1:exon:5350;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19807901 | 19807976 | 19807901 | ID=Msa0633750-mRNA-1:exon:5349;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19808497 | 19808571 | 19808497 | ID=Msa0633750-mRNA-1:exon:5348;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19809196 | 19809310 | 19809196 | ID=Msa0633750-mRNA-1:exon:5347;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19809494 | 19809623 | 19809494 | ID=Msa0633750-mRNA-1:exon:5346;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19809983 | 19810135 | 19809983 | ID=Msa0633750-mRNA-1:exon:5345;Parent=Msa0633750-mRNA-1 |
| chr4_3 | exon | 19810246 | 19810660 | 19810246 | ID=Msa0633750-mRNA-1:exon:5344;Parent=Msa0633750-mRNA-1 |
| chr4_3 | five_prime_UTR | 19810360 | 19810660 | 19810360 | ID=Msa0633750-mRNA-1:five_prime_utr;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19810246 | 19810359 | 19810246 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19809983 | 19810135 | 19809983 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19809494 | 19809623 | 19809494 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19809196 | 19809310 | 19809196 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19808497 | 19808571 | 19808497 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19807901 | 19807976 | 19807901 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19807645 | 19807719 | 19807645 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | CDS | 19807441 | 19807509 | 19807441 | ID=Msa0633750-mRNA-1:cds;Parent=Msa0633750-mRNA-1 |
| chr4_3 | three_prime_UTR | 19807260 | 19807440 | 19807260 | ID=Msa0633750-mRNA-1:three_prime_utr;Parent=Msa0633750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
