AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0077410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 258 sgRNAs with CRISPR-Local

Find 722 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGGTGGAGGTGGTGGTTT+TGG 0.165985 1_2:-54310577 Msa0077410:CDS
TTTGGCAAAGGTGGAGGTTT+TGG 0.194933 1_2:-54310421 Msa0077410:CDS
AAGGGAGGTGGGTTTGGAGG+TGG 0.199064 1_2:-54311549 Msa0077410:CDS
GGTGGTGTTGGAGGTGGTTC+TGG 0.211561 1_2:-54310595 Msa0077410:CDS
GTTGGAGGAGGTGGTGGTTC+TGG 0.212985 1_2:-54310463 Msa0077410:CDS
GCTGGTGGAGGTGGTGGATT+TGG 0.216653 1_2:-54311291 Msa0077410:CDS
GGAGGAGAAGGAGGTGGTTT+TGG 0.220744 1_2:-54310319 Msa0077410:CDS
GGTGGGTTTGGAGGTGGGTT+TGG 0.225129 1_2:-54311543 Msa0077410:CDS
GGTGGTGCTGGAGGAGGTTC+TGG 0.231131 1_2:-54310397 Msa0077410:CDS
GGTGGTATTGGAGGAGGTTC+TGG 0.235486 1_2:-54310625 Msa0077410:CDS
GGTGGTGCAGGAGGTGGAGG+AGG 0.245112 1_2:-54311459 Msa0077410:CDS
GGTGGTTCAGGTGGAGGTTT+TGG 0.247596 1_2:-54310493 Msa0077410:CDS
TTTGGTGGAGGAGGAGGATT+TGG 0.255853 1_2:-54311483 Msa0077410:CDS
TTTGGAGGTGGGTTTGGTGG+TGG 0.259812 1_2:-54311537 Msa0077410:CDS
CTTGGTGGTGGTGGAGGCTT+TGG 0.269777 1_2:-54310943 Msa0077410:CDS
GCAGGAGGTGGAGGAGGGTT+TGG 0.270174 1_2:-54311453 Msa0077410:CDS
GGTGGGTTTGGTGGTGGAGG+AGG 0.277967 1_2:-54311531 Msa0077410:CDS
ATTGGAGGTGGAGGAGGGTT+TGG 0.278848 1_2:-54311405 Msa0077410:CDS
GGTGGCGGCGGTGGTGGTTT+TGG 0.281565 1_2:-54311501 Msa0077410:CDS
CTTGGTGGTGGCGGAGGCTT+TGG 0.285191 1_2:-54310811 Msa0077410:CDS
CTTGGTGGTGGCGGAGGCTT+TGG 0.285191 1_2:-54310877 Msa0077410:CDS
GGCGGTGGAGGTGCCGGAGG+AGG 0.287032 1_2:-54311381 Msa0077410:CDS
GGAGGTTCTGGTGGTGGTAT+TGG 0.287110 1_2:-54310385 Msa0077410:CDS
TTCGGCAAAGGTGGTGGCTT+TGG 0.289097 1_2:-54310355 Msa0077410:CDS
TTTGGTGGTGGAGGAGGAGC+TGG 0.289352 1_2:-54311525 Msa0077410:CDS
GGTGGTGTTGGAGGAGGGTC+AGG 0.293111 1_2:-54311141 Msa0077410:CDS
TTTGGCAAGGGAGGTGGGTT+TGG 0.295858 1_2:-54311555 Msa0077410:CDS
GGTGGCTTTGGAGGAGGTCT+TGG 0.295907 1_2:-54310343 Msa0077410:CDS
CTTGGAGGTGGTGGAGGCTT+TGG 0.296213 1_2:-54311009 Msa0077410:CDS
GGCGGCATTGGAGGTGGATT+TGG 0.296515 1_2:-54310439 Msa0077410:CDS
TTTGGAAAGGGCGGTGGCCT+TGG 0.301120 1_2:-54311111 Msa0077410:CDS
GGAGGTGGGTTTGGTGGTGG+AGG 0.302727 1_2:-54311534 Msa0077410:CDS
GGCAAGGGAGGTGGGTTTGG+AGG 0.303594 1_2:-54311552 Msa0077410:CDS
GGTGGTGTTGGTGGTGGAAT+TGG 0.306666 1_2:-54310913 Msa0077410:CDS
GGAGGTGGAGGCGGTGGAAT+TGG 0.309472 1_2:-54310271 Msa0077410:CDS
GGAGGAGGGTTTGGTGGCGG+TGG 0.309768 1_2:-54311396 Msa0077410:CDS
GGTGGTCATGGTGGCGGCTT+CGG 0.317244 1_2:-54311249 Msa0077410:CDS
GGAGCTGGTGGTGGCGGCGG+TGG 0.318038 1_2:-54311510 Msa0077410:CDS
GGCGGTGGTGTTGGAGGAGG+TGG 0.318186 1_2:-54310472 Msa0077410:CDS
GGTGGAGGAGGGTTTGGTGG+TGG 0.320331 1_2:-54311447 Msa0077410:CDS
ACTTGGAGGTGGTCATGGTG+GGG 0.322552 1_2:-54311214 Msa0077410:CDS
ATCGGTAAAGGTGGAGGTTT+AGG 0.322962 1_2:-54310649 Msa0077410:CDS
AGGGAGGTGGGTTTGGAGGT+GGG 0.324505 1_2:-54311548 Msa0077410:CDS
TTTGGAAAAGGTGGAGGACT+TGG 0.325677 1_2:-54311273 Msa0077410:CDS
GTCGGGTTTGGCAAGGGAGG+TGG 0.326964 1_2:-54311561 Msa0077410:CDS
GGAGGTTTAGGTGGTGGTAT+TGG 0.329647 1_2:-54310637 Msa0077410:CDS
TTTGGTGGTGGTGCAGGAGG+TGG 0.331845 1_2:-54311465 Msa0077410:CDS
GGTGGAATCGGAAAAGGTTT+TGG 0.332715 1_2:-54310529 Msa0077410:CDS
GGTGGCGGTGGCGGAGGAGG+TGG 0.332736 1_2:-54310286 Msa0077410:CDS
TCTGGTGGAGGTGGTGGTGT+TGG 0.332929 1_2:-54310607 Msa0077410:CDS
GGAGGGTCAGGTGGTGGCTT+TGG 0.333970 1_2:-54311129 Msa0077410:CDS
TTTGGTGGCGGTGGCGGAGG+AGG 0.334748 1_2:-54310289 Msa0077410:CDS
GGTGGTTCTGGTGGCGGCAT+TGG 0.335418 1_2:-54310451 Msa0077410:CDS
GGGTTTGGAGGTGGGTTTGG+TGG 0.336197 1_2:-54311540 Msa0077410:CDS
GACTTGGAGGTGGTCATGGT+GGG 0.336292 1_2:-54311215 Msa0077410:CDS
GGCGGAGGAGGTGGAGGCGG+TGG 0.337819 1_2:-54310277 Msa0077410:CDS
GGGTTTGGTGGCGGTGGCGG+AGG 0.342976 1_2:-54310292 Msa0077410:CDS
GGAGGTGGAGGAGGGTTTGG+TGG 0.344361 1_2:-54311450 Msa0077410:CDS
CTTGGAGGTGGTCATGGTGG+GGG 0.344969 1_2:-54311213 Msa0077410:CDS
GGAGGATTTGGTGGTGGTGC+AGG 0.349433 1_2:-54311471 Msa0077410:CDS
GGAGGGTTTGGTGGCGGTGG+AGG 0.349976 1_2:-54311393 Msa0077410:CDS
GGACTTGGAGGTGGTCATGG+TGG 0.351092 1_2:-54311216 Msa0077410:CDS
TTTGGAGGCGGTTCTGGTAC+TGG 0.352224 1_2:-54310559 Msa0077410:CDS
GGTGGAGGGTTTGGTGGCGG+TGG 0.352612 1_2:-54310298 Msa0077410:CDS
GGAGGGTTTGGTGGCGGTGG+CGG 0.352742 1_2:-54310295 Msa0077410:CDS
GGTGGTTCTGGTGGAGGTGG+TGG 0.355379 1_2:-54310583 Msa0077410:CDS
GGTGTTGGAGGAGGGTCAGG+TGG 0.357819 1_2:-54311138 Msa0077410:CDS
ATTGGCAAAGGTGGAGGTCT+TGG 0.358510 1_2:-54311027 Msa0077410:CDS
TTTGGTGGAGGGTTTGGTGG+CGG 0.358705 1_2:-54310301 Msa0077410:CDS
GCTGGTGGTGGCGGCGGTGG+TGG 0.359090 1_2:-54311507 Msa0077410:CDS
TTCGGAGGTGGTGGTGGAAT+TGG 0.360987 1_2:-54311171 Msa0077410:CDS
GGTGGTGGTGCAGGAGGTGG+AGG 0.363511 1_2:-54311462 Msa0077410:CDS
GGAGGAGCTGGTGGTGGCGG+CGG 0.364205 1_2:-54311513 Msa0077410:CDS
GGCGGTGGCGGAGGAGGTGG+AGG 0.365714 1_2:-54310283 Msa0077410:CDS
GTTGGAGGTGGTTCTGGTGG+AGG 0.367615 1_2:-54310589 Msa0077410:CDS
GGAGGTTCTGGTGGAGGTGG+TGG 0.368555 1_2:-54310613 Msa0077410:CDS
GGAGGTCTTGGTGGAGGAGA+AGG 0.374681 1_2:-54310331 Msa0077410:CDS
GGAGGAGGAGCTGGTGGTGG+CGG 0.374914 1_2:-54311516 Msa0077410:CDS
GGAGGGTTTGGTGGTGGTGC+AGG 0.376644 1_2:-54311441 Msa0077410:CDS
GGTGGTGTTGGAGGTGGAAT+TGG 0.377169 1_2:-54311045 Msa0077410:intron
GCAGGCGGCGGACATGGAAT+TGG 0.378074 1_2:-54311423 Msa0077410:CDS
GGTGGAGGAGGGTTTGGTGG+CGG 0.378499 1_2:-54311399 Msa0077410:CDS
GGAGGTCTTGGTGGTGGTGG+AGG 0.378620 1_2:-54310949 Msa0077410:CDS
AAAGGTGGTGGTGTTGGAGG+AGG 0.380016 1_2:-54311147 Msa0077410:CDS
GGAAAAGGTGGTGGTGTTGG+TGG 0.382045 1_2:-54310922 Msa0077410:CDS
GGCTTTGGAGGAGGTCTTGG+TGG 0.383032 1_2:-54310340 Msa0077410:CDS
GGAAAGGGCGGTGGCCTTGG+AGG 0.384822 1_2:-54311108 Msa0077410:CDS
GGAAAAGGTGGTGGTGTTGG+AGG 0.387367 1_2:-54310856 Msa0077410:CDS
TTTGGTGGCGGTGGAGGTGC+CGG 0.388517 1_2:-54311387 Msa0077410:CDS
GGAGGTGCCGGAGGAGGGCA+TGG 0.389079 1_2:-54311375 Msa0077410:CDS
GGGGCATTGGCAAAGGTGGG+GGG 0.389523 1_2:-54311194 Msa0077410:CDS
GGAGGTGGAGGAGGGTTTGG+TGG 0.392094 1_2:-54311402 Msa0077410:CDS
ATCGGAAAAGGTGGAGGTCT+TGG 0.392536 1_2:-54310961 Msa0077410:CDS
GGTGGAGGTCTTGGTGGTGG+TGG 0.394118 1_2:-54310952 Msa0077410:CDS
GGTTTAGGTGGTGGTATTGG+AGG 0.395260 1_2:-54310634 Msa0077410:CDS
GGAGGTGGTGGTGTTGGAGG+TGG 0.395507 1_2:-54310601 Msa0077410:CDS
AAAGGTGGTGGCGTTGGAGG+TGG 0.396414 1_2:-54310985 Msa0077410:CDS
GGAGGTGGTTCTGGTGGAGG+TGG 0.396658 1_2:-54310586 Msa0077410:CDS
TTTGGAAAAGGTGGTGGTGT+TGG 0.396726 1_2:-54310925 Msa0077410:CDS
GGTGGAGGAGGAGCTGGTGG+TGG 0.397507 1_2:-54311519 Msa0077410:CDS
GGTGGAGGTGGTGGTGTTGG+AGG 0.397668 1_2:-54310604 Msa0077410:CDS
GGTGGTATTGGTGGAGGGTT+CGG 0.398620 1_2:-54310373 Msa0077410:CDS
GGTGGTGCAGGCGGCGGACA+TGG 0.401478 1_2:-54311429 Msa0077410:CDS
GGTGGTGTTGGAGGTGGCAT+TGG 0.401996 1_2:-54310847 Msa0077410:CDS
GGAGGAGGGCATGGGATTGG+AGG 0.403180 1_2:-54311366 Msa0077410:intron
GGTTCTGGTGGTGGTATTGG+TGG 0.404109 1_2:-54310382 Msa0077410:CDS
ATTGGTAAAGGTGGCGGACT+TGG 0.405771 1_2:-54311339 Msa0077410:intron
GGTGGAATTGGCAAAGGTGG+TGG 0.406703 1_2:-54311159 Msa0077410:CDS
GGCGGTTCTGGTACTGGAAT+TGG 0.406873 1_2:-54310553 Msa0077410:CDS
GGTGGTGGAGGCTTTGGAAA+AGG 0.407364 1_2:-54310937 Msa0077410:CDS
TTTGGTGGTGGTGCTGGAGG+AGG 0.409927 1_2:-54310403 Msa0077410:CDS
TTTGGCGGTGGTGTTGGAGG+AGG 0.410035 1_2:-54310475 Msa0077410:CDS
GGAGGAGGTTCTGGTGGAGG+TGG 0.410924 1_2:-54310616 Msa0077410:CDS
GGAGGTCTTGGAGGTGGTGG+AGG 0.411167 1_2:-54311015 Msa0077410:CDS
TTCGGAAAGGGTGGAGGACT+TGG 0.413350 1_2:-54311231 Msa0077410:CDS
GGAGGACTTGGAGGTGGTCA+TGG 0.413918 1_2:-54311219 Msa0077410:CDS
CATGGTGGCGGCTTCGGAAA+GGG 0.414567 1_2:-54311243 Msa0077410:CDS
AAAGGTGGTGGTGTTGGTGG+TGG 0.414689 1_2:-54310919 Msa0077410:CDS
TCTGGTGGCGGCATTGGAGG+TGG 0.417010 1_2:-54310445 Msa0077410:CDS
GGTGGCGGAGGAGGTGGAGG+CGG 0.418925 1_2:-54310280 Msa0077410:CDS
GGTTCTGGTGGCGGCATTGG+AGG 0.419796 1_2:-54310448 Msa0077410:CDS
GGAGGTGGTGGTTCTGGTGG+CGG 0.420131 1_2:-54310457 Msa0077410:CDS
GTTGGAGGAGGGTCAGGTGG+TGG 0.420636 1_2:-54311135 Msa0077410:CDS
GGTGGATTTGGCAAAGGTGG+AGG 0.420851 1_2:-54310427 Msa0077410:CDS
GCCGGAGGAGGGCATGGGAT+TGG 0.421554 1_2:-54311369 Msa0077410:CDS
GTGGGATAGGAAAAGGTGGG+GGG 0.421664 1_2:-54311314 Msa0077410:CDS
AAAGGTGGCGGACTTGGTGG+TGG 0.421826 1_2:-54311333 Msa0077410:intron
TCTGGTGGTGGTATTGGTGG+AGG 0.424704 1_2:-54310379 Msa0077410:CDS
GGAGGACTTGGTGGTGGCGG+AGG 0.426777 1_2:-54310817 Msa0077410:CDS
GGAGGACTTGGTGGTGGCGG+AGG 0.426777 1_2:-54310883 Msa0077410:CDS
ATTGGCAAAGGTGGTGGTGT+TGG 0.427581 1_2:-54311153 Msa0077410:CDS
AAAGGTGGTGGCATTGGAGG+TGG 0.427769 1_2:-54310673 Msa0077410:intron
GGGTTTGGTGGTGGTGCAGG+CGG 0.427991 1_2:-54311438 Msa0077410:CDS
TTTGGTGGTGGTGCAGGCGG+CGG 0.428479 1_2:-54311435 Msa0077410:CDS
GGAGGGTTCGGCAAAGGTGG+TGG 0.431822 1_2:-54310361 Msa0077410:CDS
ATTGGAGGAGGTTCTGGTGG+AGG 0.431983 1_2:-54310619 Msa0077410:CDS
ATTGGAAAAGGTGGAGGACT+TGG 0.434057 1_2:-54310829 Msa0077410:CDS
ATTGGCAAAGGTGGAGGACT+TGG 0.434057 1_2:-54310895 Msa0077410:CDS
TTAGGTGGTGGTATTGGAGG+AGG 0.437276 1_2:-54310631 Msa0077410:CDS
GGAGGACTTGGAGGTGGTCA+TGG 0.439602 1_2:-54311261 Msa0077410:CDS
TTTGGAAAAGGTGGTGGCAT+TGG 0.441763 1_2:-54310679 Msa0077410:intron
TCAGGTGGTGGCTTTGGAAA+GGG 0.442004 1_2:-54311123 Msa0077410:CDS
GTGGTGCAGGAGGTGGAGGA+GGG 0.445570 1_2:-54311458 Msa0077410:CDS
GCGGTGGAGGTGCCGGAGGA+GGG 0.445726 1_2:-54311380 Msa0077410:CDS
GGCAAAGGTGGTGGCTTTGG+AGG 0.446852 1_2:-54310352 Msa0077410:CDS
GGTGGAGGAGGAGGATTTGG+TGG 0.446952 1_2:-54311480 Msa0077410:CDS
GTTGGAGGTGGCATTGGAAA+AGG 0.448191 1_2:-54310841 Msa0077410:CDS
GGAAAAGGTGGAGGACTTGG+AGG 0.448436 1_2:-54311270 Msa0077410:CDS
AAAGGTGGTGGTGTTGGAGG+TGG 0.450082 1_2:-54310853 Msa0077410:CDS
TTTGGAAAAGGTGGTGGTGT+TGG 0.450512 1_2:-54310859 Msa0077410:CDS
GTCAGGTGGTGGCTTTGGAA+AGG 0.452017 1_2:-54311124 Msa0077410:CDS
TTTGGAGGAGGTCTTGGTGG+AGG 0.452382 1_2:-54310337 Msa0077410:CDS
CTTGGAGGTGGTCATGGTGG+CGG 0.453463 1_2:-54311255 Msa0077410:CDS
GGAAAAGGTGGTGGCGTTGG+AGG 0.453817 1_2:-54310988 Msa0077410:CDS
GGAAAAGGTGGTGGCATTGG+AGG 0.454761 1_2:-54310676 Msa0077410:intron
GGTGGTGGAGGCTTTGGAAA+AGG 0.454832 1_2:-54311003 Msa0077410:CDS
GGTCTTGGTGGAGGAGAAGG+AGG 0.455443 1_2:-54310328 Msa0077410:CDS
GGTGGTGGAGGAGGAGCTGG+TGG 0.456102 1_2:-54311522 Msa0077410:CDS
GGTGGAGGACTTGGTGGTGG+CGG 0.456971 1_2:-54310886 Msa0077410:CDS
ATTGGTGGTGGAATCGGAAA+AGG 0.457136 1_2:-54310535 Msa0077410:CDS
AAGGGCGGTGGCCTTGGAGG+TGG 0.457339 1_2:-54311105 Msa0077410:intron
GGTGGCGTTGGAGGTGGAAT+CGG 0.458015 1_2:-54310979 Msa0077410:CDS
GGCGGCTTCGGAAAGGGTGG+AGG 0.458617 1_2:-54311237 Msa0077410:CDS
CTTGGTGGAGGAGAAGGAGG+TGG 0.463288 1_2:-54310325 Msa0077410:CDS
GGTGTTGGAGGTGGTTCTGG+TGG 0.463416 1_2:-54310592 Msa0077410:CDS
AAAGGTGGTGGCTTTGGAGG+AGG 0.463440 1_2:-54310349 Msa0077410:CDS
GCTGGAGGAGGTTCTGGTGG+TGG 0.463530 1_2:-54310391 Msa0077410:CDS
GGTAAAGGTGGCGGACTTGG+TGG 0.463847 1_2:-54311336 Msa0077410:intron
TCATGGTGGCGGCTTCGGAA+AGG 0.464252 1_2:-54311244 Msa0077410:CDS
GGTGGTGTTGGAGGAGGTGG+TGG 0.466516 1_2:-54310469 Msa0077410:CDS
CATGGAATTGGAGGTGGAGG+AGG 0.467531 1_2:-54311411 Msa0077410:CDS
GGCAAAGGTGGTGGTGTTGG+AGG 0.467813 1_2:-54311150 Msa0077410:CDS
GGTGGCGGAGGCTTTGGAAA+AGG 0.469442 1_2:-54310805 Msa0077410:intron
GGTGGCGGAGGCTTTGGAAA+AGG 0.469442 1_2:-54310871 Msa0077410:CDS
GGTGGAGGTCTTGGAGGTGG+TGG 0.469504 1_2:-54311018 Msa0077410:CDS
CTGGTGGTGGTATTGGTGGA+GGG 0.470066 1_2:-54310378 Msa0077410:CDS
GGTGGCATTGGAGGTGGAAT+CGG 0.470605 1_2:-54310667 Msa0077410:CDS
TCGGGTTTGGCAAGGGAGGT+GGG 0.470823 1_2:-54311560 Msa0077410:CDS
GGTGGTGGGATAGGAAAAGG+TGG 0.471257 1_2:-54311318 Msa0077410:CDS
GGCGGACTTGGTGGTGGGAT+AGG 0.472157 1_2:-54311327 Msa0077410:CDS
GGATTTGGTGGTGGTGCAGG+AGG 0.475924 1_2:-54311468 Msa0077410:CDS
AAAGGTGGAGGTCTTGGAGG+TGG 0.478982 1_2:-54311021 Msa0077410:CDS
GGTGGAGGACTTGGTGGTGG+CGG 0.479881 1_2:-54310820 Msa0077410:CDS
ACTGGAATTGGTGGTGGAAT+CGG 0.480006 1_2:-54310541 Msa0077410:CDS
TCCAATCCCATGCCCTCCTC+CGG 0.486383 1_2:+54311368 None:intergenic
GGTGGGATAGGAAAAGGTGG+GGG 0.488751 1_2:-54311315 Msa0077410:CDS
GGTGGTGGAATTGGCAAAGG+TGG 0.490030 1_2:-54310904 Msa0077410:CDS
GGAGGTGGAATTGGCAAAGG+TGG 0.492321 1_2:-54311036 Msa0077410:intron
GGAAAGGGTGGAGGACTTGG+AGG 0.492612 1_2:-54311228 Msa0077410:CDS
GGTGGCTTTGGAAAGGGCGG+TGG 0.496411 1_2:-54311117 Msa0077410:CDS
GGAGGCTTTGGAAAAGGTGG+TGG 0.496537 1_2:-54310931 Msa0077410:CDS
GGTGGTGGAATTGGCAAAGG+TGG 0.500627 1_2:-54311162 Msa0077410:CDS
TTTGGAAAAGGTGGTGGCGT+TGG 0.502188 1_2:-54310991 Msa0077410:CDS
GGAGGAGGAGGATTTGGTGG+TGG 0.502495 1_2:-54311477 Msa0077410:CDS
GTTGGAGGTGGAATCGGAAA+AGG 0.505308 1_2:-54310973 Msa0077410:CDS
GGCAAAGGTGGAGGTCTTGG+AGG 0.506372 1_2:-54311024 Msa0077410:CDS
GGTGGAATTGGCAAAGGTGG+AGG 0.506737 1_2:-54311033 Msa0077410:CDS
AAAGGTGGAGGACTTGGTGG+TGG 0.508439 1_2:-54310889 Msa0077410:CDS
GGTATTGGAGGAGGTTCTGG+TGG 0.508692 1_2:-54310622 Msa0077410:CDS
GGCAAAGGTGGAGGACTTGG+TGG 0.509703 1_2:-54310892 Msa0077410:CDS
GGTGGAATCGGTAAAGGTGG+AGG 0.510092 1_2:-54310655 Msa0077410:CDS
GGAAAAGGTGGAGGACTTGG+TGG 0.512401 1_2:-54310826 Msa0077410:CDS
ATGGAATTGGAGGTGGAGGA+GGG 0.513024 1_2:-54311410 Msa0077410:CDS
ATTGGAGGTGGAATCGGTAA+AGG 0.516603 1_2:-54310661 Msa0077410:CDS
GGTGCTGGAGGAGGTTCTGG+TGG 0.518451 1_2:-54310394 Msa0077410:CDS
GGTGGAATTGGCAAAGGTGG+AGG 0.519303 1_2:-54310901 Msa0077410:CDS
GGTGGAGGCTTTGGAAAAGG+TGG 0.520752 1_2:-54310934 Msa0077410:CDS
GGTGGCGGCTTCGGAAAGGG+TGG 0.520942 1_2:-54311240 Msa0077410:CDS
GGAGGTGGTGGATTTGGAAA+AGG 0.521779 1_2:-54311285 Msa0077410:CDS
GGCGGCGGACATGGAATTGG+AGG 0.522774 1_2:-54311420 Msa0077410:CDS
TCTGGTACTGGAATTGGTGG+TGG 0.523960 1_2:-54310547 Msa0077410:CDS
GGAAAAGGTGGAGGTCTTGG+TGG 0.527193 1_2:-54310958 Msa0077410:CDS
GGTGGAATCGGAAAAGGTGG+AGG 0.527886 1_2:-54310967 Msa0077410:CDS
AAAGGTGGAGGTCTTGGTGG+TGG 0.530514 1_2:-54310955 Msa0077410:CDS
GTTGGTGGTGGAATTGGCAA+AGG 0.534826 1_2:-54310907 Msa0077410:CDS
GAGGTGCCGGAGGAGGGCAT+GGG 0.535244 1_2:-54311374 Msa0077410:CDS
CTCCCTTGCCAAACCCGACA+AGG 0.536812 1_2:+54311565 None:intergenic
ATTGGTGGAGGGTTCGGCAA+AGG 0.536995 1_2:-54310367 Msa0077410:CDS
CTTGTCGGGTTTGGCAAGGG+AGG 0.537570 1_2:-54311564 Msa0077410:CDS
GGAGGAGGTGGTGGTTCTGG+TGG 0.538221 1_2:-54310460 Msa0077410:CDS
CTTGGTGGTGGGATAGGAAA+AGG 0.542326 1_2:-54311321 Msa0077410:CDS
GGAGGCTTTGGAAAAGGTGG+TGG 0.542866 1_2:-54310997 Msa0077410:CDS
TGGTGGGATAGGAAAAGGTG+GGG 0.549531 1_2:-54311316 Msa0077410:CDS
GGAGGTGGATTTGGCAAAGG+TGG 0.550906 1_2:-54310430 Msa0077410:CDS
AAAGGTGGAGGACTTGGTGG+TGG 0.551090 1_2:-54310823 Msa0077410:CDS
GGTGGTGGATTTGGAAAAGG+TGG 0.551493 1_2:-54311282 Msa0077410:CDS
AAACCTTGTCGGGTTTGGCA+AGG 0.551905 1_2:-54311568 Msa0077410:CDS
AACCTTGTCGGGTTTGGCAA+GGG 0.553527 1_2:-54311567 Msa0077410:CDS
GGTGGAGGGTTCGGCAAAGG+TGG 0.555099 1_2:-54310364 Msa0077410:CDS
TGGGATAGGAAAAGGTGGGG+GGG 0.557770 1_2:-54311313 Msa0077410:CDS
GGTGGCGGTGGAGGTGCCGG+AGG 0.560515 1_2:-54311384 Msa0077410:CDS
GGTAAAGGTGGAGGTTTAGG+TGG 0.560781 1_2:-54310646 Msa0077410:CDS
AAGGGTGGAGGACTTGGAGG+TGG 0.562037 1_2:-54311225 Msa0077410:CDS
AAAGGTGGAGGACTTGGAGG+TGG 0.562037 1_2:-54311267 Msa0077410:CDS
GGTGGATTTGGAAAAGGTGG+AGG 0.562437 1_2:-54311279 Msa0077410:CDS
GGAGGCTTTGGAAAAGGTGG+TGG 0.563502 1_2:-54310865 Msa0077410:CDS
GGAGGTGGCATTGGAAAAGG+TGG 0.563692 1_2:-54310838 Msa0077410:CDS
GTGGTGGGATAGGAAAAGGT+GGG 0.564333 1_2:-54311317 Msa0077410:CDS
GGCGGACATGGAATTGGAGG+TGG 0.564893 1_2:-54311417 Msa0077410:CDS
GGTGGAGGCTTTGGAAAAGG+TGG 0.567797 1_2:-54311000 Msa0077410:CDS
ATAAGAAATGTTTGTACGAG+CGG 0.570585 1_2:-54310150 Msa0077410:three_prime_UTR
AAAGGTGGAGGTTTAGGTGG+TGG 0.571950 1_2:-54310643 Msa0077410:CDS
GGCGGAGGCTTTGGAAAAGG+TGG 0.573192 1_2:-54310868 Msa0077410:CDS
GGACATGGAATTGGAGGTGG+AGG 0.583217 1_2:-54311414 Msa0077410:CDS
ACATTTCTTATATATAGCAC+CGG 0.590650 1_2:+54310162 None:intergenic
GTTGGAGGTGGAATTGGCAA+AGG 0.591993 1_2:-54311039 Msa0077410:intron
GGTTCTGGTACTGGAATTGG+TGG 0.592841 1_2:-54310550 Msa0077410:CDS
AAGGTGGTGGTGTTGGAGGA+GGG 0.593059 1_2:-54311146 Msa0077410:CDS
AAGGTGGCGGACTTGGTGGT+GGG 0.594769 1_2:-54311332 Msa0077410:CDS
GGTGGCATTGGAAAAGGTGG+AGG 0.600955 1_2:-54310835 Msa0077410:CDS
GGAGGTGGAATCGGAAAAGG+TGG 0.604747 1_2:-54310970 Msa0077410:CDS
ATTGGAGGTGGATTTGGCAA+AGG 0.605822 1_2:-54310433 Msa0077410:CDS
GGACTTGGAGGTGGTCATGG+TGG 0.613469 1_2:-54311258 Msa0077410:CDS
GGTGGTGGTGGAATTGGCAA+AGG 0.635926 1_2:-54311165 Msa0077410:CDS
GGAGGTGGAATCGGTAAAGG+TGG 0.659397 1_2:-54310658 Msa0077410:CDS
GGTGGTGGCTTTGGAAAGGG+CGG 0.666290 1_2:-54311120 Msa0077410:CDS
ATATTAACGTCGATGCTCAG+TGG 0.696123 1_2:+54310245 None:intergenic
CCTTACCTATACCACCTCCA+AGG 0.700502 1_2:+54311094 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTGCATTTTTTATGAAC+CGG - chr1_2:54311479-54311498 Msa0077410:CDS 25.0%
! ACATTTCTTATATATAGCAC+CGG + chr1_2:54311501-54311520 None:intergenic 25.0%
!!! AACTTGCATTTTTTATGAAC+CGG - chr1_2:54311479-54311498 Msa0077410:CDS 25.0%
! ACATTTCTTATATATAGCAC+CGG + chr1_2:54311501-54311520 None:intergenic 25.0%
ATAAGAAATGTTTGTACGAG+CGG - chr1_2:54311510-54311529 Msa0077410:CDS 30.0%
ATAAGAAATGTTTGTACGAG+CGG - chr1_2:54311510-54311529 Msa0077410:CDS 30.0%
GAAGATGAGAAAAACCTTGT+CGG - chr1_2:54310081-54310100 Msa0077410:three_prime_UTR 35.0%
AAGATGAGAAAAACCTTGTC+GGG - chr1_2:54310082-54310101 Msa0077410:three_prime_UTR 35.0%
GAAGATGAGAAAAACCTTGT+CGG - chr1_2:54310081-54310100 Msa0077410:three_prime_UTR 35.0%
AAGATGAGAAAAACCTTGTC+GGG - chr1_2:54310082-54310101 Msa0077410:three_prime_UTR 35.0%
!! AAAGGTTTTGGTGGAGGTAT+TGG - chr1_2:54311143-54311162 Msa0077410:CDS 40.0%
!!! AAGGTTTTGGTGGAGGTATT+GGG - chr1_2:54311144-54311163 Msa0077410:CDS 40.0%
ATATTAACGTCGATGCTCAG+TGG + chr1_2:54311418-54311437 None:intergenic 40.0%
!! AAAGGTTTTGGTGGAGGTAT+TGG - chr1_2:54311143-54311162 Msa0077410:CDS 40.0%
!!! AAGGTTTTGGTGGAGGTATT+GGG - chr1_2:54311144-54311163 Msa0077410:CDS 40.0%
ATATTAACGTCGATGCTCAG+TGG + chr1_2:54311418-54311437 None:intergenic 40.0%
GAGAAAAACCTTGTCGGGTT+TGG - chr1_2:54310087-54310106 Msa0077410:three_prime_UTR 45.0%
! ATTGGAGGTGGGATTGGTAA+AGG - chr1_2:54310309-54310328 Msa0077410:CDS 45.0%
TTTGGAAAAGGTGGAGGACT+TGG - chr1_2:54310387-54310406 Msa0077410:CDS 45.0%
CTTGGAGGTGGTATAGGTAA+GGG - chr1_2:54310567-54310586 Msa0077410:CDS 45.0%
! TTTGGAAAAGGTGGTGGTGT+TGG - chr1_2:54310735-54310754 Msa0077410:intron 45.0%
! TTTGGAAAAGGTGGTGGTGT+TGG - chr1_2:54310735-54310754 Msa0077410:intron 45.0%
ATTGGAAAAGGTGGAGGACT+TGG - chr1_2:54310831-54310850 Msa0077410:CDS 45.0%
! TTTGGAAAAGGTGGTGGTGT+TGG - chr1_2:54310735-54310754 Msa0077410:intron 45.0%
ATTGGAAAAGGTGGAGGACT+TGG - chr1_2:54310831-54310850 Msa0077410:CDS 45.0%
GAGGATTTGGAAAAGGTGGT+GGG - chr1_2:54310928-54310947 Msa0077410:CDS 45.0%
AGGATTTGGAAAAGGTGGTG+GGG - chr1_2:54310929-54310948 Msa0077410:CDS 45.0%
!! AAAGGTGGAGGCTTTGGAAA+AGG - chr1_2:54310969-54310988 Msa0077410:CDS 45.0%
! TTTGGAAAAGGTGGTGGCAT+TGG - chr1_2:54310981-54311000 Msa0077410:CDS 45.0%
ATTGGAGGTGGAATCGGTAA+AGG - chr1_2:54310999-54311018 Msa0077410:CDS 45.0%
ATCGGTAAAGGTGGAGGTTT+AGG - chr1_2:54311011-54311030 Msa0077410:CDS 45.0%
!! ACTGGAATTGGTGGTGGAAT+CGG - chr1_2:54311119-54311138 Msa0077410:CDS 45.0%
!! ATTGGTGGTGGAATCGGAAA+AGG - chr1_2:54311125-54311144 Msa0077410:CDS 45.0%
! GGTGGAATCGGAAAAGGTTT+TGG - chr1_2:54311131-54311150 Msa0077410:CDS 45.0%
!! GGAATCGGAAAAGGTTTTGG+TGG - chr1_2:54311134-54311153 Msa0077410:CDS 45.0%
!! ATCGGAAAAGGTTTTGGTGG+AGG - chr1_2:54311137-54311156 Msa0077410:CDS 45.0%
!!! AGGTTTTGGTGGAGGTATTG+GGG - chr1_2:54311145-54311164 Msa0077410:CDS 45.0%
! ATTGGAGGTGGATTTGGCAA+AGG - chr1_2:54311227-54311246 Msa0077410:CDS 45.0%
! TTTGGCAAAGGTGGAGGTTT+TGG - chr1_2:54311239-54311258 Msa0077410:CDS 45.0%
GAGAAAAACCTTGTCGGGTT+TGG - chr1_2:54310087-54310106 Msa0077410:three_prime_UTR 45.0%
! ATTGGAGGTGGGATTGGTAA+AGG - chr1_2:54310309-54310328 Msa0077410:CDS 45.0%
TTTGGAAAAGGTGGAGGACT+TGG - chr1_2:54310387-54310406 Msa0077410:CDS 45.0%
CTTGGAGGTGGTATAGGTAA+GGG - chr1_2:54310567-54310586 Msa0077410:CDS 45.0%
! TTTGGAAAAGGTGGTGGTGT+TGG - chr1_2:54310735-54310754 Msa0077410:intron 45.0%
! TTTGGAAAAGGTGGTGGTGT+TGG - chr1_2:54310735-54310754 Msa0077410:intron 45.0%
ATTGGAAAAGGTGGAGGACT+TGG - chr1_2:54310831-54310850 Msa0077410:CDS 45.0%
! TTTGGAAAAGGTGGTGGTGT+TGG - chr1_2:54310735-54310754 Msa0077410:intron 45.0%
ATTGGAAAAGGTGGAGGACT+TGG - chr1_2:54310831-54310850 Msa0077410:CDS 45.0%
GAGGATTTGGAAAAGGTGGT+GGG - chr1_2:54310928-54310947 Msa0077410:CDS 45.0%
AGGATTTGGAAAAGGTGGTG+GGG - chr1_2:54310929-54310948 Msa0077410:CDS 45.0%
!! AAAGGTGGAGGCTTTGGAAA+AGG - chr1_2:54310969-54310988 Msa0077410:CDS 45.0%
! TTTGGAAAAGGTGGTGGCAT+TGG - chr1_2:54310981-54311000 Msa0077410:CDS 45.0%
ATTGGAGGTGGAATCGGTAA+AGG - chr1_2:54310999-54311018 Msa0077410:CDS 45.0%
ATCGGTAAAGGTGGAGGTTT+AGG - chr1_2:54311011-54311030 Msa0077410:CDS 45.0%
!! ACTGGAATTGGTGGTGGAAT+CGG - chr1_2:54311119-54311138 Msa0077410:CDS 45.0%
!! ATTGGTGGTGGAATCGGAAA+AGG - chr1_2:54311125-54311144 Msa0077410:CDS 45.0%
! GGTGGAATCGGAAAAGGTTT+TGG - chr1_2:54311131-54311150 Msa0077410:CDS 45.0%
!! GGAATCGGAAAAGGTTTTGG+TGG - chr1_2:54311134-54311153 Msa0077410:CDS 45.0%
!! ATCGGAAAAGGTTTTGGTGG+AGG - chr1_2:54311137-54311156 Msa0077410:CDS 45.0%
!!! AGGTTTTGGTGGAGGTATTG+GGG - chr1_2:54311145-54311164 Msa0077410:CDS 45.0%
! ATTGGAGGTGGATTTGGCAA+AGG - chr1_2:54311227-54311246 Msa0077410:CDS 45.0%
! TTTGGCAAAGGTGGAGGTTT+TGG - chr1_2:54311239-54311258 Msa0077410:CDS 45.0%
AAACCTTGTCGGGTTTGGCA+AGG - chr1_2:54310092-54310111 Msa0077410:three_prime_UTR 50.0%
AACCTTGTCGGGTTTGGCAA+GGG - chr1_2:54310093-54310112 Msa0077410:three_prime_UTR 50.0%
TTTGGTGGAGGAGGAGGATT+TGG - chr1_2:54310177-54310196 Msa0077410:three_prime_UTR 50.0%
ATGGAATTGGAGGTGGAGGA+GGG - chr1_2:54310250-54310269 Msa0077410:exon 50.0%
!! ATTGGTAAAGGTGGCGGACT+TGG - chr1_2:54310321-54310340 Msa0077410:CDS 50.0%
!! CTTGGTGGTGGGATAGGAAA+AGG - chr1_2:54310339-54310358 Msa0077410:CDS 50.0%
! GTGGTGGGATAGGAAAAGGT+GGG - chr1_2:54310343-54310362 Msa0077410:CDS 50.0%
TGGTGGGATAGGAAAAGGTG+GGG - chr1_2:54310344-54310363 Msa0077410:CDS 50.0%
!! GGAGGTGGTGGATTTGGAAA+AGG - chr1_2:54310375-54310394 Msa0077410:CDS 50.0%
!! GGTGGTGGATTTGGAAAAGG+TGG - chr1_2:54310378-54310397 Msa0077410:CDS 50.0%
! GGTGGATTTGGAAAAGGTGG+AGG - chr1_2:54310381-54310400 Msa0077410:CDS 50.0%
! ATTGGCAAAGGTGGTGGTGT+TGG - chr1_2:54310507-54310526 Msa0077410:CDS 50.0%
!! TCAGGTGGTGGCTTTGGAAA+GGG - chr1_2:54310537-54310556 Msa0077410:CDS 50.0%
CCTTACCTATACCACCTCCA+AGG + chr1_2:54310569-54310588 None:intergenic 50.0%
CCTTGGAGGTGGTATAGGTA+AGG - chr1_2:54310566-54310585 Msa0077410:CDS 50.0%
!!! TGGTGGTGGAGGTTTTGGAA+AGG - chr1_2:54310590-54310609 Msa0077410:CDS 50.0%
!!! GGTGGTGGAGGTTTTGGAAA+GGG - chr1_2:54310591-54310610 Msa0077410:CDS 50.0%
GTTGGAGGTGGAATTGGCAA+AGG - chr1_2:54310621-54310640 Msa0077410:CDS 50.0%
ATTGGCAAAGGTGGAGGTCT+TGG - chr1_2:54310633-54310652 Msa0077410:CDS 50.0%
! TTTGGAAAAGGTGGTGGCGT+TGG - chr1_2:54310669-54310688 Msa0077410:CDS 50.0%
GTTGGAGGTGGAATCGGAAA+AGG - chr1_2:54310687-54310706 Msa0077410:intron 50.0%
ATCGGAAAAGGTGGAGGTCT+TGG - chr1_2:54310699-54310718 Msa0077410:intron 50.0%
!! GTTGGTGGTGGAATTGGCAA+AGG - chr1_2:54310753-54310772 Msa0077410:intron 50.0%
ATTGGCAAAGGTGGAGGACT+TGG - chr1_2:54310765-54310784 Msa0077410:intron 50.0%
! GTTGGAGGTGGCATTGGAAA+AGG - chr1_2:54310819-54310838 Msa0077410:CDS 50.0%
! GTTGGAGGTGGCATTGGAAA+AGG - chr1_2:54310819-54310838 Msa0077410:CDS 50.0%
!! GGTGGTGGAGGATTTGGAAA+AGG - chr1_2:54310921-54310940 Msa0077410:CDS 50.0%
GGTGGAGGATTTGGAAAAGG+TGG - chr1_2:54310924-54310943 Msa0077410:CDS 50.0%
GGAGGATTTGGAAAAGGTGG+TGG - chr1_2:54310927-54310946 Msa0077410:CDS 50.0%
!! TTTGGAAAAGGTGGTGGGGT+TGG - chr1_2:54310933-54310952 Msa0077410:CDS 50.0%
ATTGGCAAAGGTGGAGGCTT+TGG - chr1_2:54310963-54310982 Msa0077410:CDS 50.0%
GGTAAAGGTGGAGGTTTAGG+TGG - chr1_2:54311014-54311033 Msa0077410:CDS 50.0%
AAAGGTGGAGGTTTAGGTGG+TGG - chr1_2:54311017-54311036 Msa0077410:CDS 50.0%
! GGAGGTTTAGGTGGTGGTAT+TGG - chr1_2:54311023-54311042 Msa0077410:CDS 50.0%
! GGTTTAGGTGGTGGTATTGG+AGG - chr1_2:54311026-54311045 Msa0077410:CDS 50.0%
! TTAGGTGGTGGTATTGGAGG+AGG - chr1_2:54311029-54311048 Msa0077410:CDS 50.0%
! GGTTCTGGTACTGGAATTGG+TGG - chr1_2:54311110-54311129 Msa0077410:CDS 50.0%
! TCTGGTACTGGAATTGGTGG+TGG - chr1_2:54311113-54311132 Msa0077410:CDS 50.0%
!!! GGTTTTGGTGGAGGTATTGG+GGG - chr1_2:54311146-54311165 Msa0077410:CDS 50.0%
!! AAAGGTGGAGGTTTTGGTGG+TGG - chr1_2:54311245-54311264 Msa0077410:CDS 50.0%
!!! AAGGAGGTGGTTTTGGTGGA+GGG - chr1_2:54311348-54311367 Msa0077410:intron 50.0%
AAACCTTGTCGGGTTTGGCA+AGG - chr1_2:54310092-54310111 Msa0077410:three_prime_UTR 50.0%
AACCTTGTCGGGTTTGGCAA+GGG - chr1_2:54310093-54310112 Msa0077410:three_prime_UTR 50.0%
TTTGGTGGAGGAGGAGGATT+TGG - chr1_2:54310177-54310196 Msa0077410:three_prime_UTR 50.0%
ATGGAATTGGAGGTGGAGGA+GGG - chr1_2:54310250-54310269 Msa0077410:exon 50.0%
!! ATTGGTAAAGGTGGCGGACT+TGG - chr1_2:54310321-54310340 Msa0077410:CDS 50.0%
!! CTTGGTGGTGGGATAGGAAA+AGG - chr1_2:54310339-54310358 Msa0077410:CDS 50.0%
! GTGGTGGGATAGGAAAAGGT+GGG - chr1_2:54310343-54310362 Msa0077410:CDS 50.0%
TGGTGGGATAGGAAAAGGTG+GGG - chr1_2:54310344-54310363 Msa0077410:CDS 50.0%
!! GGAGGTGGTGGATTTGGAAA+AGG - chr1_2:54310375-54310394 Msa0077410:CDS 50.0%
!! GGTGGTGGATTTGGAAAAGG+TGG - chr1_2:54310378-54310397 Msa0077410:CDS 50.0%
! GGTGGATTTGGAAAAGGTGG+AGG - chr1_2:54310381-54310400 Msa0077410:CDS 50.0%
! ATTGGCAAAGGTGGTGGTGT+TGG - chr1_2:54310507-54310526 Msa0077410:CDS 50.0%
!! TCAGGTGGTGGCTTTGGAAA+GGG - chr1_2:54310537-54310556 Msa0077410:CDS 50.0%
CCTTACCTATACCACCTCCA+AGG + chr1_2:54310569-54310588 None:intergenic 50.0%
CCTTGGAGGTGGTATAGGTA+AGG - chr1_2:54310566-54310585 Msa0077410:CDS 50.0%
!!! TGGTGGTGGAGGTTTTGGAA+AGG - chr1_2:54310590-54310609 Msa0077410:CDS 50.0%
!!! GGTGGTGGAGGTTTTGGAAA+GGG - chr1_2:54310591-54310610 Msa0077410:CDS 50.0%
GTTGGAGGTGGAATTGGCAA+AGG - chr1_2:54310621-54310640 Msa0077410:CDS 50.0%
ATTGGCAAAGGTGGAGGTCT+TGG - chr1_2:54310633-54310652 Msa0077410:CDS 50.0%
! TTTGGAAAAGGTGGTGGCGT+TGG - chr1_2:54310669-54310688 Msa0077410:CDS 50.0%
GTTGGAGGTGGAATCGGAAA+AGG - chr1_2:54310687-54310706 Msa0077410:intron 50.0%
ATCGGAAAAGGTGGAGGTCT+TGG - chr1_2:54310699-54310718 Msa0077410:intron 50.0%
!! GTTGGTGGTGGAATTGGCAA+AGG - chr1_2:54310753-54310772 Msa0077410:intron 50.0%
ATTGGCAAAGGTGGAGGACT+TGG - chr1_2:54310765-54310784 Msa0077410:intron 50.0%
! GTTGGAGGTGGCATTGGAAA+AGG - chr1_2:54310819-54310838 Msa0077410:CDS 50.0%
! GTTGGAGGTGGCATTGGAAA+AGG - chr1_2:54310819-54310838 Msa0077410:CDS 50.0%
!! GGTGGTGGAGGATTTGGAAA+AGG - chr1_2:54310921-54310940 Msa0077410:CDS 50.0%
GGTGGAGGATTTGGAAAAGG+TGG - chr1_2:54310924-54310943 Msa0077410:CDS 50.0%
GGAGGATTTGGAAAAGGTGG+TGG - chr1_2:54310927-54310946 Msa0077410:CDS 50.0%
!! TTTGGAAAAGGTGGTGGGGT+TGG - chr1_2:54310933-54310952 Msa0077410:CDS 50.0%
ATTGGCAAAGGTGGAGGCTT+TGG - chr1_2:54310963-54310982 Msa0077410:CDS 50.0%
GGTAAAGGTGGAGGTTTAGG+TGG - chr1_2:54311014-54311033 Msa0077410:CDS 50.0%
AAAGGTGGAGGTTTAGGTGG+TGG - chr1_2:54311017-54311036 Msa0077410:CDS 50.0%
! GGAGGTTTAGGTGGTGGTAT+TGG - chr1_2:54311023-54311042 Msa0077410:CDS 50.0%
! GGTTTAGGTGGTGGTATTGG+AGG - chr1_2:54311026-54311045 Msa0077410:CDS 50.0%
! TTAGGTGGTGGTATTGGAGG+AGG - chr1_2:54311029-54311048 Msa0077410:CDS 50.0%
! GGTTCTGGTACTGGAATTGG+TGG - chr1_2:54311110-54311129 Msa0077410:CDS 50.0%
! TCTGGTACTGGAATTGGTGG+TGG - chr1_2:54311113-54311132 Msa0077410:CDS 50.0%
!!! GGTTTTGGTGGAGGTATTGG+GGG - chr1_2:54311146-54311165 Msa0077410:CDS 50.0%
!! AAAGGTGGAGGTTTTGGTGG+TGG - chr1_2:54311245-54311264 Msa0077410:CDS 50.0%
!!! AAGGAGGTGGTTTTGGTGGA+GGG - chr1_2:54311348-54311367 Msa0077410:intron 50.0%
! TTTGGCAAGGGAGGTGGGTT+TGG - chr1_2:54310105-54310124 Msa0077410:three_prime_UTR 55.0%
!! TTTGGAGGTGGGTTTGGTGG+TGG - chr1_2:54310123-54310142 Msa0077410:three_prime_UTR 55.0%
GGACATGGAATTGGAGGTGG+AGG - chr1_2:54310246-54310265 Msa0077410:exon 55.0%
CATGGAATTGGAGGTGGAGG+AGG - chr1_2:54310249-54310268 Msa0077410:exon 55.0%
ATTGGAGGTGGAGGAGGGTT+TGG - chr1_2:54310255-54310274 Msa0077410:exon 55.0%
CATGGGATTGGAGGTGGGAT+TGG - chr1_2:54310303-54310322 Msa0077410:CDS 55.0%
! GGAGGTGGGATTGGTAAAGG+TGG - chr1_2:54310312-54310331 Msa0077410:CDS 55.0%
! GGTGGGATTGGTAAAGGTGG+CGG - chr1_2:54310315-54310334 Msa0077410:CDS 55.0%
!! GGTGGTGGGATAGGAAAAGG+TGG - chr1_2:54310342-54310361 Msa0077410:CDS 55.0%
GGTGGGATAGGAAAAGGTGG+GGG - chr1_2:54310345-54310364 Msa0077410:CDS 55.0%
GTGGGATAGGAAAAGGTGGG+GGG - chr1_2:54310346-54310365 Msa0077410:CDS 55.0%
TGGGATAGGAAAAGGTGGGG+GGG - chr1_2:54310347-54310366 Msa0077410:CDS 55.0%
GGAAAAGGTGGAGGACTTGG+AGG - chr1_2:54310390-54310409 Msa0077410:CDS 55.0%
AAAGGTGGAGGACTTGGAGG+TGG - chr1_2:54310393-54310412 Msa0077410:CDS 55.0%
TTCGGAAAGGGTGGAGGACT+TGG - chr1_2:54310429-54310448 Msa0077410:CDS 55.0%
GACTTGGAGGTGGTCATGGT+GGG - chr1_2:54310403-54310422 Msa0077410:CDS 55.0%
ACTTGGAGGTGGTCATGGTG+GGG - chr1_2:54310404-54310423 Msa0077410:CDS 55.0%
ATTGGCAAAGGTGGGGGGTT+CGG - chr1_2:54310471-54310490 Msa0077410:CDS 55.0%
!! TTCGGAGGTGGTGGTGGAAT+TGG - chr1_2:54310489-54310508 Msa0077410:CDS 55.0%
!! GGTGGTGGTGGAATTGGCAA+AGG - chr1_2:54310495-54310514 Msa0077410:CDS 55.0%
!! GGTGGTGGAATTGGCAAAGG+TGG - chr1_2:54310498-54310517 Msa0077410:CDS 55.0%
GGTGGAATTGGCAAAGGTGG+TGG - chr1_2:54310501-54310520 Msa0077410:CDS 55.0%
! AAAGGTGGTGGTGTTGGAGG+AGG - chr1_2:54310513-54310532 Msa0077410:CDS 55.0%
! AAGGTGGTGGTGTTGGAGGA+GGG - chr1_2:54310514-54310533 Msa0077410:CDS 55.0%
!! GTCAGGTGGTGGCTTTGGAA+AGG - chr1_2:54310536-54310555 Msa0077410:CDS 55.0%
GGAGGTGGTATAGGTAAGGG+TGG - chr1_2:54310570-54310589 Msa0077410:CDS 55.0%
GGTGGTATAGGTAAGGGTGG+TGG - chr1_2:54310573-54310592 Msa0077410:CDS 55.0%
! GGTATAGGTAAGGGTGGTGG+TGG - chr1_2:54310576-54310595 Msa0077410:CDS 55.0%
!! ATAGGTAAGGGTGGTGGTGG+AGG - chr1_2:54310579-54310598 Msa0077410:CDS 55.0%
!!! AAGGGTGGTGGTGGAGGTTT+TGG - chr1_2:54310585-54310604 Msa0077410:CDS 55.0%
!!! GGTGGAGGTTTTGGAAAGGG+CGG - chr1_2:54310594-54310613 Msa0077410:CDS 55.0%
TTTGGAAAGGGCGGTGGTGT+TGG - chr1_2:54310603-54310622 Msa0077410:CDS 55.0%
! GGTGGTGTTGGAGGTGGAAT+TGG - chr1_2:54310615-54310634 Msa0077410:CDS 55.0%
GGAGGTGGAATTGGCAAAGG+TGG - chr1_2:54310624-54310643 Msa0077410:CDS 55.0%
GGTGGAATTGGCAAAGGTGG+AGG - chr1_2:54310501-54310520 Msa0077410:CDS 55.0%
AAAGGTGGAGGTCTTGGAGG+TGG - chr1_2:54310639-54310658 Msa0077410:CDS 55.0%
!! GGTGGTGGAGGCTTTGGAAA+AGG - chr1_2:54310657-54310676 Msa0077410:CDS 55.0%
!! GGTGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310660-54310679 Msa0077410:CDS 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
GGAGGTGGAATCGGAAAAGG+TGG - chr1_2:54310690-54310709 Msa0077410:intron 55.0%
GGTGGAATCGGAAAAGGTGG+AGG - chr1_2:54310693-54310712 Msa0077410:intron 55.0%
GGAAAAGGTGGAGGTCTTGG+TGG - chr1_2:54310702-54310721 Msa0077410:intron 55.0%
AAAGGTGGAGGTCTTGGTGG+TGG - chr1_2:54310705-54310724 Msa0077410:intron 55.0%
!! GGTGGTGGAGGCTTTGGAAA+AGG - chr1_2:54310657-54310676 Msa0077410:CDS 55.0%
!! GGTGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310660-54310679 Msa0077410:CDS 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGTGTTGG+TGG - chr1_2:54310738-54310757 Msa0077410:intron 55.0%
!! AAAGGTGGTGGTGTTGGTGG+TGG - chr1_2:54310741-54310760 Msa0077410:intron 55.0%
!! GGTGGTGTTGGTGGTGGAAT+TGG - chr1_2:54310747-54310766 Msa0077410:intron 55.0%
!! GGTGGTGGAATTGGCAAAGG+TGG - chr1_2:54310498-54310517 Msa0077410:CDS 55.0%
GGTGGAATTGGCAAAGGTGG+AGG - chr1_2:54310501-54310520 Msa0077410:CDS 55.0%
!! AAAGGTGGAGGACTTGGTGG+TGG - chr1_2:54310771-54310790 Msa0077410:intron 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGTGTTGG+AGG - chr1_2:54310738-54310757 Msa0077410:intron 55.0%
! AAAGGTGGTGGTGTTGGAGG+TGG - chr1_2:54310513-54310532 Msa0077410:CDS 55.0%
! GGAGGTGGCATTGGAAAAGG+TGG - chr1_2:54310822-54310841 Msa0077410:CDS 55.0%
! GGTGGCATTGGAAAAGGTGG+AGG - chr1_2:54310825-54310844 Msa0077410:CDS 55.0%
GGAAAAGGTGGAGGACTTGG+TGG - chr1_2:54310390-54310409 Msa0077410:CDS 55.0%
!! AAAGGTGGAGGACTTGGTGG+TGG - chr1_2:54310771-54310790 Msa0077410:intron 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGTGTTGG+AGG - chr1_2:54310738-54310757 Msa0077410:intron 55.0%
! AAAGGTGGTGGTGTTGGAGG+TGG - chr1_2:54310513-54310532 Msa0077410:CDS 55.0%
! GGAGGTGGCATTGGAAAAGG+TGG - chr1_2:54310822-54310841 Msa0077410:CDS 55.0%
! GGTGGCATTGGAAAAGGTGG+AGG - chr1_2:54310825-54310844 Msa0077410:CDS 55.0%
GGAAAAGGTGGAGGACTTGG+TGG - chr1_2:54310390-54310409 Msa0077410:CDS 55.0%
!! AAAGGTGGAGGACTTGGTGG+TGG - chr1_2:54310771-54310790 Msa0077410:intron 55.0%
!! CTTGGTGGTGGTGGAGGATT+TGG - chr1_2:54310915-54310934 Msa0077410:CDS 55.0%
! GTTGGAGGTGGGATTGGCAA+AGG - chr1_2:54310951-54310970 Msa0077410:CDS 55.0%
!! GGTGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310660-54310679 Msa0077410:CDS 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGCATTGG+AGG - chr1_2:54310984-54311003 Msa0077410:CDS 55.0%
! AAAGGTGGTGGCATTGGAGG+TGG - chr1_2:54310987-54311006 Msa0077410:CDS 55.0%
! GGTGGCATTGGAGGTGGAAT+CGG - chr1_2:54310993-54311012 Msa0077410:CDS 55.0%
GGAGGTGGAATCGGTAAAGG+TGG - chr1_2:54311002-54311021 Msa0077410:CDS 55.0%
GGTGGAATCGGTAAAGGTGG+AGG - chr1_2:54311005-54311024 Msa0077410:CDS 55.0%
! GGTGGTATTGGAGGAGGTTC+TGG - chr1_2:54311035-54311054 Msa0077410:CDS 55.0%
! GGTATTGGAGGAGGTTCTGG+TGG - chr1_2:54311038-54311057 Msa0077410:intron 55.0%
! ATTGGAGGAGGTTCTGGTGG+AGG - chr1_2:54311041-54311060 Msa0077410:intron 55.0%
!! TCTGGTGGAGGTGGTGGTTT+TGG - chr1_2:54311083-54311102 Msa0077410:intron 55.0%
! TTTGGAGGCGGTTCTGGTAC+TGG - chr1_2:54311101-54311120 Msa0077410:intron 55.0%
! GGCGGTTCTGGTACTGGAAT+TGG - chr1_2:54311107-54311126 Msa0077410:CDS 55.0%
!! TTTGGTGGAGGTATTGGGGG+TGG - chr1_2:54311149-54311168 Msa0077410:CDS 55.0%
! GGTGGTTCAGGTGGAGGTTT+TGG - chr1_2:54311167-54311186 Msa0077410:CDS 55.0%
!! GGTTCAGGTGGAGGTTTTGG+CGG - chr1_2:54311170-54311189 Msa0077410:CDS 55.0%
! GGAGGTGGATTTGGCAAAGG+TGG - chr1_2:54311230-54311249 Msa0077410:CDS 55.0%
! GGTGGATTTGGCAAAGGTGG+AGG - chr1_2:54311233-54311252 Msa0077410:CDS 55.0%
!! GGCAAAGGTGGAGGTTTTGG+TGG - chr1_2:54311242-54311261 Msa0077410:CDS 55.0%
!! GGAGGTTCTGGTGGTGGTAT+TGG - chr1_2:54311275-54311294 Msa0077410:CDS 55.0%
!! GGTTCTGGTGGTGGTATTGG+TGG - chr1_2:54311278-54311297 Msa0077410:CDS 55.0%
!! TCTGGTGGTGGTATTGGTGG+AGG - chr1_2:54311281-54311300 Msa0077410:CDS 55.0%
!! CTGGTGGTGGTATTGGTGGA+GGG - chr1_2:54311282-54311301 Msa0077410:CDS 55.0%
!! GGTGGTATTGGTGGAGGGTT+CGG - chr1_2:54311287-54311306 Msa0077410:CDS 55.0%
ATTGGTGGAGGGTTCGGCAA+AGG - chr1_2:54311293-54311312 Msa0077410:CDS 55.0%
! TTCGGCAAAGGTGGTGGCTT+TGG - chr1_2:54311305-54311324 Msa0077410:CDS 55.0%
!! AAAGGTGGTGGCTTTGGAGG+AGG - chr1_2:54311311-54311330 Msa0077410:CDS 55.0%
TTTGGAGGAGGTCTTGGTGG+AGG - chr1_2:54311323-54311342 Msa0077410:CDS 55.0%
! GGAGGAGAAGGAGGTGGTTT+TGG - chr1_2:54311341-54311360 Msa0077410:intron 55.0%
!!! GGAGAAGGAGGTGGTTTTGG+TGG - chr1_2:54311344-54311363 Msa0077410:intron 55.0%
!!! GAAGGAGGTGGTTTTGGTGG+AGG - chr1_2:54311347-54311366 Msa0077410:intron 55.0%
!!! GGTGGTTTTGGTGGAGGGTT+TGG - chr1_2:54311353-54311372 Msa0077410:intron 55.0%
!! GGTTTTGGTGGAGGGTTTGG+TGG - chr1_2:54311356-54311375 Msa0077410:intron 55.0%
!! TTTGGTGGAGGGTTTGGTGG+CGG - chr1_2:54311359-54311378 Msa0077410:intron 55.0%
! TTTGGCAAGGGAGGTGGGTT+TGG - chr1_2:54310105-54310124 Msa0077410:three_prime_UTR 55.0%
!! TTTGGAGGTGGGTTTGGTGG+TGG - chr1_2:54310123-54310142 Msa0077410:three_prime_UTR 55.0%
GGACATGGAATTGGAGGTGG+AGG - chr1_2:54310246-54310265 Msa0077410:exon 55.0%
CATGGAATTGGAGGTGGAGG+AGG - chr1_2:54310249-54310268 Msa0077410:exon 55.0%
ATTGGAGGTGGAGGAGGGTT+TGG - chr1_2:54310255-54310274 Msa0077410:exon 55.0%
CATGGGATTGGAGGTGGGAT+TGG - chr1_2:54310303-54310322 Msa0077410:CDS 55.0%
! GGAGGTGGGATTGGTAAAGG+TGG - chr1_2:54310312-54310331 Msa0077410:CDS 55.0%
! GGTGGGATTGGTAAAGGTGG+CGG - chr1_2:54310315-54310334 Msa0077410:CDS 55.0%
!! GGTGGTGGGATAGGAAAAGG+TGG - chr1_2:54310342-54310361 Msa0077410:CDS 55.0%
GGTGGGATAGGAAAAGGTGG+GGG - chr1_2:54310345-54310364 Msa0077410:CDS 55.0%
GTGGGATAGGAAAAGGTGGG+GGG - chr1_2:54310346-54310365 Msa0077410:CDS 55.0%
TGGGATAGGAAAAGGTGGGG+GGG - chr1_2:54310347-54310366 Msa0077410:CDS 55.0%
GGAAAAGGTGGAGGACTTGG+AGG - chr1_2:54310390-54310409 Msa0077410:CDS 55.0%
AAAGGTGGAGGACTTGGAGG+TGG - chr1_2:54310393-54310412 Msa0077410:CDS 55.0%
TTCGGAAAGGGTGGAGGACT+TGG - chr1_2:54310429-54310448 Msa0077410:CDS 55.0%
GACTTGGAGGTGGTCATGGT+GGG - chr1_2:54310403-54310422 Msa0077410:CDS 55.0%
ACTTGGAGGTGGTCATGGTG+GGG - chr1_2:54310404-54310423 Msa0077410:CDS 55.0%
ATTGGCAAAGGTGGGGGGTT+CGG - chr1_2:54310471-54310490 Msa0077410:CDS 55.0%
!! TTCGGAGGTGGTGGTGGAAT+TGG - chr1_2:54310489-54310508 Msa0077410:CDS 55.0%
!! GGTGGTGGTGGAATTGGCAA+AGG - chr1_2:54310495-54310514 Msa0077410:CDS 55.0%
!! GGTGGTGGAATTGGCAAAGG+TGG - chr1_2:54310498-54310517 Msa0077410:CDS 55.0%
GGTGGAATTGGCAAAGGTGG+TGG - chr1_2:54310501-54310520 Msa0077410:CDS 55.0%
! AAAGGTGGTGGTGTTGGAGG+AGG - chr1_2:54310513-54310532 Msa0077410:CDS 55.0%
! AAGGTGGTGGTGTTGGAGGA+GGG - chr1_2:54310514-54310533 Msa0077410:CDS 55.0%
!! GTCAGGTGGTGGCTTTGGAA+AGG - chr1_2:54310536-54310555 Msa0077410:CDS 55.0%
GGAGGTGGTATAGGTAAGGG+TGG - chr1_2:54310570-54310589 Msa0077410:CDS 55.0%
GGTGGTATAGGTAAGGGTGG+TGG - chr1_2:54310573-54310592 Msa0077410:CDS 55.0%
! GGTATAGGTAAGGGTGGTGG+TGG - chr1_2:54310576-54310595 Msa0077410:CDS 55.0%
!! ATAGGTAAGGGTGGTGGTGG+AGG - chr1_2:54310579-54310598 Msa0077410:CDS 55.0%
!!! AAGGGTGGTGGTGGAGGTTT+TGG - chr1_2:54310585-54310604 Msa0077410:CDS 55.0%
!!! GGTGGAGGTTTTGGAAAGGG+CGG - chr1_2:54310594-54310613 Msa0077410:CDS 55.0%
TTTGGAAAGGGCGGTGGTGT+TGG - chr1_2:54310603-54310622 Msa0077410:CDS 55.0%
! GGTGGTGTTGGAGGTGGAAT+TGG - chr1_2:54310615-54310634 Msa0077410:CDS 55.0%
GGAGGTGGAATTGGCAAAGG+TGG - chr1_2:54310624-54310643 Msa0077410:CDS 55.0%
GGTGGAATTGGCAAAGGTGG+AGG - chr1_2:54310501-54310520 Msa0077410:CDS 55.0%
AAAGGTGGAGGTCTTGGAGG+TGG - chr1_2:54310639-54310658 Msa0077410:CDS 55.0%
!! GGTGGTGGAGGCTTTGGAAA+AGG - chr1_2:54310657-54310676 Msa0077410:CDS 55.0%
!! GGTGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310660-54310679 Msa0077410:CDS 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
GGAGGTGGAATCGGAAAAGG+TGG - chr1_2:54310690-54310709 Msa0077410:intron 55.0%
GGTGGAATCGGAAAAGGTGG+AGG - chr1_2:54310693-54310712 Msa0077410:intron 55.0%
GGAAAAGGTGGAGGTCTTGG+TGG - chr1_2:54310702-54310721 Msa0077410:intron 55.0%
AAAGGTGGAGGTCTTGGTGG+TGG - chr1_2:54310705-54310724 Msa0077410:intron 55.0%
!! GGTGGTGGAGGCTTTGGAAA+AGG - chr1_2:54310657-54310676 Msa0077410:CDS 55.0%
!! GGTGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310660-54310679 Msa0077410:CDS 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGTGTTGG+TGG - chr1_2:54310738-54310757 Msa0077410:intron 55.0%
!! AAAGGTGGTGGTGTTGGTGG+TGG - chr1_2:54310741-54310760 Msa0077410:intron 55.0%
!! GGTGGTGTTGGTGGTGGAAT+TGG - chr1_2:54310747-54310766 Msa0077410:intron 55.0%
!! GGTGGTGGAATTGGCAAAGG+TGG - chr1_2:54310498-54310517 Msa0077410:CDS 55.0%
GGTGGAATTGGCAAAGGTGG+AGG - chr1_2:54310501-54310520 Msa0077410:CDS 55.0%
!! AAAGGTGGAGGACTTGGTGG+TGG - chr1_2:54310771-54310790 Msa0077410:intron 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGTGTTGG+AGG - chr1_2:54310738-54310757 Msa0077410:intron 55.0%
! AAAGGTGGTGGTGTTGGAGG+TGG - chr1_2:54310513-54310532 Msa0077410:CDS 55.0%
! GGAGGTGGCATTGGAAAAGG+TGG - chr1_2:54310822-54310841 Msa0077410:CDS 55.0%
! GGTGGCATTGGAAAAGGTGG+AGG - chr1_2:54310825-54310844 Msa0077410:CDS 55.0%
GGAAAAGGTGGAGGACTTGG+TGG - chr1_2:54310390-54310409 Msa0077410:CDS 55.0%
!! AAAGGTGGAGGACTTGGTGG+TGG - chr1_2:54310771-54310790 Msa0077410:intron 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGTGTTGG+AGG - chr1_2:54310738-54310757 Msa0077410:intron 55.0%
! AAAGGTGGTGGTGTTGGAGG+TGG - chr1_2:54310513-54310532 Msa0077410:CDS 55.0%
! GGAGGTGGCATTGGAAAAGG+TGG - chr1_2:54310822-54310841 Msa0077410:CDS 55.0%
! GGTGGCATTGGAAAAGGTGG+AGG - chr1_2:54310825-54310844 Msa0077410:CDS 55.0%
GGAAAAGGTGGAGGACTTGG+TGG - chr1_2:54310390-54310409 Msa0077410:CDS 55.0%
!! AAAGGTGGAGGACTTGGTGG+TGG - chr1_2:54310771-54310790 Msa0077410:intron 55.0%
!! CTTGGTGGTGGTGGAGGATT+TGG - chr1_2:54310915-54310934 Msa0077410:CDS 55.0%
! GTTGGAGGTGGGATTGGCAA+AGG - chr1_2:54310951-54310970 Msa0077410:CDS 55.0%
!! GGTGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310660-54310679 Msa0077410:CDS 55.0%
!! GGAGGCTTTGGAAAAGGTGG+TGG - chr1_2:54310663-54310682 Msa0077410:CDS 55.0%
! GGAAAAGGTGGTGGCATTGG+AGG - chr1_2:54310984-54311003 Msa0077410:CDS 55.0%
! AAAGGTGGTGGCATTGGAGG+TGG - chr1_2:54310987-54311006 Msa0077410:CDS 55.0%
! GGTGGCATTGGAGGTGGAAT+CGG - chr1_2:54310993-54311012 Msa0077410:CDS 55.0%
GGAGGTGGAATCGGTAAAGG+TGG - chr1_2:54311002-54311021 Msa0077410:CDS 55.0%
GGTGGAATCGGTAAAGGTGG+AGG - chr1_2:54311005-54311024 Msa0077410:CDS 55.0%
! GGTGGTATTGGAGGAGGTTC+TGG - chr1_2:54311035-54311054 Msa0077410:CDS 55.0%
! GGTATTGGAGGAGGTTCTGG+TGG - chr1_2:54311038-54311057 Msa0077410:intron 55.0%
! ATTGGAGGAGGTTCTGGTGG+AGG - chr1_2:54311041-54311060 Msa0077410:intron 55.0%
!! TCTGGTGGAGGTGGTGGTTT+TGG - chr1_2:54311083-54311102 Msa0077410:intron 55.0%
! TTTGGAGGCGGTTCTGGTAC+TGG - chr1_2:54311101-54311120 Msa0077410:intron 55.0%
! GGCGGTTCTGGTACTGGAAT+TGG - chr1_2:54311107-54311126 Msa0077410:CDS 55.0%
!! TTTGGTGGAGGTATTGGGGG+TGG - chr1_2:54311149-54311168 Msa0077410:CDS 55.0%
! GGTGGTTCAGGTGGAGGTTT+TGG - chr1_2:54311167-54311186 Msa0077410:CDS 55.0%
!! GGTTCAGGTGGAGGTTTTGG+CGG - chr1_2:54311170-54311189 Msa0077410:CDS 55.0%
! GGAGGTGGATTTGGCAAAGG+TGG - chr1_2:54311230-54311249 Msa0077410:CDS 55.0%
! GGTGGATTTGGCAAAGGTGG+AGG - chr1_2:54311233-54311252 Msa0077410:CDS 55.0%
!! GGCAAAGGTGGAGGTTTTGG+TGG - chr1_2:54311242-54311261 Msa0077410:CDS 55.0%
!! GGAGGTTCTGGTGGTGGTAT+TGG - chr1_2:54311275-54311294 Msa0077410:CDS 55.0%
!! GGTTCTGGTGGTGGTATTGG+TGG - chr1_2:54311278-54311297 Msa0077410:CDS 55.0%
!! TCTGGTGGTGGTATTGGTGG+AGG - chr1_2:54311281-54311300 Msa0077410:CDS 55.0%
!! CTGGTGGTGGTATTGGTGGA+GGG - chr1_2:54311282-54311301 Msa0077410:CDS 55.0%
!! GGTGGTATTGGTGGAGGGTT+CGG - chr1_2:54311287-54311306 Msa0077410:CDS 55.0%
ATTGGTGGAGGGTTCGGCAA+AGG - chr1_2:54311293-54311312 Msa0077410:CDS 55.0%
! TTCGGCAAAGGTGGTGGCTT+TGG - chr1_2:54311305-54311324 Msa0077410:CDS 55.0%
!! AAAGGTGGTGGCTTTGGAGG+AGG - chr1_2:54311311-54311330 Msa0077410:CDS 55.0%
TTTGGAGGAGGTCTTGGTGG+AGG - chr1_2:54311323-54311342 Msa0077410:CDS 55.0%
! GGAGGAGAAGGAGGTGGTTT+TGG - chr1_2:54311341-54311360 Msa0077410:intron 55.0%
!!! GGAGAAGGAGGTGGTTTTGG+TGG - chr1_2:54311344-54311363 Msa0077410:intron 55.0%
!!! GAAGGAGGTGGTTTTGGTGG+AGG - chr1_2:54311347-54311366 Msa0077410:intron 55.0%
!!! GGTGGTTTTGGTGGAGGGTT+TGG - chr1_2:54311353-54311372 Msa0077410:intron 55.0%
!! GGTTTTGGTGGAGGGTTTGG+TGG - chr1_2:54311356-54311375 Msa0077410:intron 55.0%
!! TTTGGTGGAGGGTTTGGTGG+CGG - chr1_2:54311359-54311378 Msa0077410:intron 55.0%
CTCCCTTGCCAAACCCGACA+AGG + chr1_2:54310098-54310117 None:intergenic 60.0%
CTTGTCGGGTTTGGCAAGGG+AGG - chr1_2:54310096-54310115 Msa0077410:three_prime_UTR 60.0%
TCGGGTTTGGCAAGGGAGGT+GGG - chr1_2:54310100-54310119 Msa0077410:three_prime_UTR 60.0%
! AAGGGAGGTGGGTTTGGAGG+TGG - chr1_2:54310111-54310130 Msa0077410:three_prime_UTR 60.0%
! AGGGAGGTGGGTTTGGAGGT+GGG - chr1_2:54310112-54310131 Msa0077410:three_prime_UTR 60.0%
! GGTGGGTTTGGAGGTGGGTT+TGG - chr1_2:54310117-54310136 Msa0077410:three_prime_UTR 60.0%
! GGGTTTGGAGGTGGGTTTGG+TGG - chr1_2:54310120-54310139 Msa0077410:three_prime_UTR 60.0%
!! TTTGGTGGTGGAGGAGGAGC+TGG - chr1_2:54310135-54310154 Msa0077410:three_prime_UTR 60.0%
!!! GGTGGTGGTTTTGGTGGAGG+AGG - chr1_2:54310168-54310187 Msa0077410:three_prime_UTR 60.0%
!!! GGTGGTTTTGGTGGAGGAGG+AGG - chr1_2:54310171-54310190 Msa0077410:three_prime_UTR 60.0%
GGTGGAGGAGGAGGATTTGG+TGG - chr1_2:54310180-54310199 Msa0077410:three_prime_UTR 60.0%
!! GGAGGAGGAGGATTTGGTGG+TGG - chr1_2:54310183-54310202 Msa0077410:three_prime_UTR 60.0%
!! GGAGGATTTGGTGGTGGTGC+AGG - chr1_2:54310189-54310208 Msa0077410:three_prime_UTR 60.0%
!! GGATTTGGTGGTGGTGCAGG+AGG - chr1_2:54310192-54310211 Msa0077410:three_prime_UTR 60.0%
!! TTTGGTGGTGGTGCAGGAGG+TGG - chr1_2:54310195-54310214 Msa0077410:three_prime_UTR 60.0%
GGCGGACATGGAATTGGAGG+TGG - chr1_2:54310243-54310262 Msa0077410:exon 60.0%
TCCAATCCCATGCCCTCCTC+CGG + chr1_2:54310295-54310314 None:intergenic 60.0%
! GAGGGCATGGGATTGGAGGT+GGG - chr1_2:54310298-54310317 Msa0077410:CDS 60.0%
!! GGTAAAGGTGGCGGACTTGG+TGG - chr1_2:54310324-54310343 Msa0077410:CDS 60.0%
!! AAAGGTGGCGGACTTGGTGG+TGG - chr1_2:54310327-54310346 Msa0077410:CDS 60.0%
!! AAGGTGGCGGACTTGGTGGT+GGG - chr1_2:54310328-54310347 Msa0077410:CDS 60.0%
ATAGGAAAAGGTGGGGGGGC+TGG - chr1_2:54310351-54310370 Msa0077410:CDS 60.0%
!! GCTGGTGGAGGTGGTGGATT+TGG - chr1_2:54310369-54310388 Msa0077410:CDS 60.0%
GGAGGACTTGGAGGTGGTCA+TGG - chr1_2:54310399-54310418 Msa0077410:CDS 60.0%
GGACTTGGAGGTGGTCATGG+TGG - chr1_2:54310402-54310421 Msa0077410:CDS 60.0%
CTTGGAGGTGGTCATGGTGG+CGG - chr1_2:54310405-54310424 Msa0077410:CDS 60.0%
!! TCATGGTGGCGGCTTCGGAA+AGG - chr1_2:54310416-54310435 Msa0077410:CDS 60.0%
!! CATGGTGGCGGCTTCGGAAA+GGG - chr1_2:54310417-54310436 Msa0077410:CDS 60.0%
GGAAAGGGTGGAGGACTTGG+AGG - chr1_2:54310432-54310451 Msa0077410:CDS 60.0%
AAGGGTGGAGGACTTGGAGG+TGG - chr1_2:54310435-54310454 Msa0077410:CDS 60.0%
GGAGGACTTGGAGGTGGTCA+TGG - chr1_2:54310399-54310418 Msa0077410:CDS 60.0%
GGACTTGGAGGTGGTCATGG+TGG - chr1_2:54310402-54310421 Msa0077410:CDS 60.0%
CTTGGAGGTGGTCATGGTGG+GGG - chr1_2:54310405-54310424 Msa0077410:CDS 60.0%
!! CATGGTGGGGGCATTGGCAA+AGG - chr1_2:54310459-54310478 Msa0077410:CDS 60.0%
!! GTGGGGGCATTGGCAAAGGT+GGG - chr1_2:54310463-54310482 Msa0077410:CDS 60.0%
!! TGGGGGCATTGGCAAAGGTG+GGG - chr1_2:54310464-54310483 Msa0077410:CDS 60.0%
! GGCAAAGGTGGTGGTGTTGG+AGG - chr1_2:54310510-54310529 Msa0077410:CDS 60.0%
!! GGTGGTGGCTTTGGAAAGGG+CGG - chr1_2:54310540-54310559 Msa0077410:CDS 60.0%
TTTGGAAAGGGCGGTGGCCT+TGG - chr1_2:54310549-54310568 Msa0077410:CDS 60.0%
! GGTGGCCTTGGAGGTGGTAT+AGG - chr1_2:54310561-54310580 Msa0077410:CDS 60.0%
!!! GGAGGTTTTGGAAAGGGCGG+TGG - chr1_2:54310597-54310616 Msa0077410:CDS 60.0%
GGCAAAGGTGGAGGTCTTGG+AGG - chr1_2:54310636-54310655 Msa0077410:CDS 60.0%
!! CTTGGAGGTGGTGGAGGCTT+TGG - chr1_2:54310651-54310670 Msa0077410:CDS 60.0%
! GGAAAAGGTGGTGGCGTTGG+AGG - chr1_2:54310672-54310691 Msa0077410:CDS 60.0%
! AAAGGTGGTGGCGTTGGAGG+TGG - chr1_2:54310675-54310694 Msa0077410:intron 60.0%
! GGTGGCGTTGGAGGTGGAAT+CGG - chr1_2:54310681-54310700 Msa0077410:intron 60.0%
!! CTTGGTGGTGGTGGAGGCTT+TGG - chr1_2:54310717-54310736 Msa0077410:intron 60.0%
GGCAAAGGTGGAGGACTTGG+TGG - chr1_2:54310768-54310787 Msa0077410:intron 60.0%
!! GGTGGCGGAGGCTTTGGAAA+AGG - chr1_2:54310789-54310808 Msa0077410:intron 60.0%
!! GGCGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310792-54310811 Msa0077410:intron 60.0%
! GGTGGTGTTGGAGGTGGCAT+TGG - chr1_2:54310813-54310832 Msa0077410:CDS 60.0%
!! GGTGGCGGAGGCTTTGGAAA+AGG - chr1_2:54310789-54310808 Msa0077410:intron 60.0%
!! GGCGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310792-54310811 Msa0077410:intron 60.0%
! GGTGGTGTTGGAGGTGGCAT+TGG - chr1_2:54310813-54310832 Msa0077410:CDS 60.0%
!! GGAAAAGGTGGTGGGGTTGG+AGG - chr1_2:54310936-54310955 Msa0077410:CDS 60.0%
!! AAAGGTGGTGGGGTTGGAGG+TGG - chr1_2:54310939-54310958 Msa0077410:CDS 60.0%
!! AAGGTGGTGGGGTTGGAGGT+GGG - chr1_2:54310940-54310959 Msa0077410:CDS 60.0%
! GGAGGTGGGATTGGCAAAGG+TGG - chr1_2:54310954-54310973 Msa0077410:CDS 60.0%
! GGTGGGATTGGCAAAGGTGG+AGG - chr1_2:54310957-54310976 Msa0077410:CDS 60.0%
! TCTGGTGGAGGTGGTGGTGT+TGG - chr1_2:54311053-54311072 Msa0077410:intron 60.0%
! GGTGGTGTTGGAGGTGGTTC+TGG - chr1_2:54311065-54311084 Msa0077410:intron 60.0%
!! GGTGTTGGAGGTGGTTCTGG+TGG - chr1_2:54311068-54311087 Msa0077410:intron 60.0%
!! GTTGGAGGTGGTTCTGGTGG+AGG - chr1_2:54311071-54311090 Msa0077410:intron 60.0%
!!! GGTGGAGGTGGTGGTTTTGG+AGG - chr1_2:54311086-54311105 Msa0077410:intron 60.0%
!!! GGAGGTGGTGGTTTTGGAGG+CGG - chr1_2:54311089-54311108 Msa0077410:intron 60.0%
!!! GGTGGTTTTGGAGGCGGTTC+TGG - chr1_2:54311095-54311114 Msa0077410:intron 60.0%
!! GGAGGTATTGGGGGTGGTTC+AGG - chr1_2:54311155-54311174 Msa0077410:CDS 60.0%
! GGTATTGGGGGTGGTTCAGG+TGG - chr1_2:54311158-54311177 Msa0077410:CDS 60.0%
ATTGGGGGTGGTTCAGGTGG+AGG - chr1_2:54311161-54311180 Msa0077410:CDS 60.0%
!! TCAGGTGGAGGTTTTGGCGG+TGG - chr1_2:54311173-54311192 Msa0077410:CDS 60.0%
!! GGAGGTTTTGGCGGTGGTGT+TGG - chr1_2:54311179-54311198 Msa0077410:CDS 60.0%
!! GGTTTTGGCGGTGGTGTTGG+AGG - chr1_2:54311182-54311201 Msa0077410:CDS 60.0%
! TTTGGCGGTGGTGTTGGAGG+AGG - chr1_2:54311185-54311204 Msa0077410:CDS 60.0%
! GTTGGAGGAGGTGGTGGTTC+TGG - chr1_2:54311197-54311216 Msa0077410:CDS 60.0%
! GGCGGCATTGGAGGTGGATT+TGG - chr1_2:54311221-54311240 Msa0077410:CDS 60.0%
!!! GGAGGTTTTGGTGGTGGTGC+TGG - chr1_2:54311251-54311270 Msa0077410:CDS 60.0%
!!! GGTTTTGGTGGTGGTGCTGG+AGG - chr1_2:54311254-54311273 Msa0077410:CDS 60.0%
!! TTTGGTGGTGGTGCTGGAGG+AGG - chr1_2:54311257-54311276 Msa0077410:CDS 60.0%
!! GGCAAAGGTGGTGGCTTTGG+AGG - chr1_2:54311308-54311327 Msa0077410:CDS 60.0%
!! GGTGGCTTTGGAGGAGGTCT+TGG - chr1_2:54311317-54311336 Msa0077410:CDS 60.0%
!! GGCTTTGGAGGAGGTCTTGG+TGG - chr1_2:54311320-54311339 Msa0077410:CDS 60.0%
GGAGGTCTTGGTGGAGGAGA+AGG - chr1_2:54311329-54311348 Msa0077410:CDS 60.0%
GGTCTTGGTGGAGGAGAAGG+AGG - chr1_2:54311332-54311351 Msa0077410:CDS 60.0%
CTTGGTGGAGGAGAAGGAGG+TGG - chr1_2:54311335-54311354 Msa0077410:intron 60.0%
CTCCCTTGCCAAACCCGACA+AGG + chr1_2:54310098-54310117 None:intergenic 60.0%
CTTGTCGGGTTTGGCAAGGG+AGG - chr1_2:54310096-54310115 Msa0077410:three_prime_UTR 60.0%
TCGGGTTTGGCAAGGGAGGT+GGG - chr1_2:54310100-54310119 Msa0077410:three_prime_UTR 60.0%
! AAGGGAGGTGGGTTTGGAGG+TGG - chr1_2:54310111-54310130 Msa0077410:three_prime_UTR 60.0%
! AGGGAGGTGGGTTTGGAGGT+GGG - chr1_2:54310112-54310131 Msa0077410:three_prime_UTR 60.0%
! GGTGGGTTTGGAGGTGGGTT+TGG - chr1_2:54310117-54310136 Msa0077410:three_prime_UTR 60.0%
! GGGTTTGGAGGTGGGTTTGG+TGG - chr1_2:54310120-54310139 Msa0077410:three_prime_UTR 60.0%
!! TTTGGTGGTGGAGGAGGAGC+TGG - chr1_2:54310135-54310154 Msa0077410:three_prime_UTR 60.0%
!!! GGTGGTGGTTTTGGTGGAGG+AGG - chr1_2:54310168-54310187 Msa0077410:three_prime_UTR 60.0%
!!! GGTGGTTTTGGTGGAGGAGG+AGG - chr1_2:54310171-54310190 Msa0077410:three_prime_UTR 60.0%
GGTGGAGGAGGAGGATTTGG+TGG - chr1_2:54310180-54310199 Msa0077410:three_prime_UTR 60.0%
!! GGAGGAGGAGGATTTGGTGG+TGG - chr1_2:54310183-54310202 Msa0077410:three_prime_UTR 60.0%
!! GGAGGATTTGGTGGTGGTGC+AGG - chr1_2:54310189-54310208 Msa0077410:three_prime_UTR 60.0%
!! GGATTTGGTGGTGGTGCAGG+AGG - chr1_2:54310192-54310211 Msa0077410:three_prime_UTR 60.0%
!! TTTGGTGGTGGTGCAGGAGG+TGG - chr1_2:54310195-54310214 Msa0077410:three_prime_UTR 60.0%
GGCGGACATGGAATTGGAGG+TGG - chr1_2:54310243-54310262 Msa0077410:exon 60.0%
TCCAATCCCATGCCCTCCTC+CGG + chr1_2:54310295-54310314 None:intergenic 60.0%
! GAGGGCATGGGATTGGAGGT+GGG - chr1_2:54310298-54310317 Msa0077410:CDS 60.0%
!! GGTAAAGGTGGCGGACTTGG+TGG - chr1_2:54310324-54310343 Msa0077410:CDS 60.0%
!! AAAGGTGGCGGACTTGGTGG+TGG - chr1_2:54310327-54310346 Msa0077410:CDS 60.0%
!! AAGGTGGCGGACTTGGTGGT+GGG - chr1_2:54310328-54310347 Msa0077410:CDS 60.0%
ATAGGAAAAGGTGGGGGGGC+TGG - chr1_2:54310351-54310370 Msa0077410:CDS 60.0%
!! GCTGGTGGAGGTGGTGGATT+TGG - chr1_2:54310369-54310388 Msa0077410:CDS 60.0%
GGAGGACTTGGAGGTGGTCA+TGG - chr1_2:54310399-54310418 Msa0077410:CDS 60.0%
GGACTTGGAGGTGGTCATGG+TGG - chr1_2:54310402-54310421 Msa0077410:CDS 60.0%
CTTGGAGGTGGTCATGGTGG+CGG - chr1_2:54310405-54310424 Msa0077410:CDS 60.0%
!! TCATGGTGGCGGCTTCGGAA+AGG - chr1_2:54310416-54310435 Msa0077410:CDS 60.0%
!! CATGGTGGCGGCTTCGGAAA+GGG - chr1_2:54310417-54310436 Msa0077410:CDS 60.0%
GGAAAGGGTGGAGGACTTGG+AGG - chr1_2:54310432-54310451 Msa0077410:CDS 60.0%
AAGGGTGGAGGACTTGGAGG+TGG - chr1_2:54310435-54310454 Msa0077410:CDS 60.0%
GGAGGACTTGGAGGTGGTCA+TGG - chr1_2:54310399-54310418 Msa0077410:CDS 60.0%
GGACTTGGAGGTGGTCATGG+TGG - chr1_2:54310402-54310421 Msa0077410:CDS 60.0%
CTTGGAGGTGGTCATGGTGG+GGG - chr1_2:54310405-54310424 Msa0077410:CDS 60.0%
!! CATGGTGGGGGCATTGGCAA+AGG - chr1_2:54310459-54310478 Msa0077410:CDS 60.0%
!! GTGGGGGCATTGGCAAAGGT+GGG - chr1_2:54310463-54310482 Msa0077410:CDS 60.0%
!! TGGGGGCATTGGCAAAGGTG+GGG - chr1_2:54310464-54310483 Msa0077410:CDS 60.0%
! GGCAAAGGTGGTGGTGTTGG+AGG - chr1_2:54310510-54310529 Msa0077410:CDS 60.0%
!! GGTGGTGGCTTTGGAAAGGG+CGG - chr1_2:54310540-54310559 Msa0077410:CDS 60.0%
TTTGGAAAGGGCGGTGGCCT+TGG - chr1_2:54310549-54310568 Msa0077410:CDS 60.0%
! GGTGGCCTTGGAGGTGGTAT+AGG - chr1_2:54310561-54310580 Msa0077410:CDS 60.0%
!!! GGAGGTTTTGGAAAGGGCGG+TGG - chr1_2:54310597-54310616 Msa0077410:CDS 60.0%
GGCAAAGGTGGAGGTCTTGG+AGG - chr1_2:54310636-54310655 Msa0077410:CDS 60.0%
!! CTTGGAGGTGGTGGAGGCTT+TGG - chr1_2:54310651-54310670 Msa0077410:CDS 60.0%
! GGAAAAGGTGGTGGCGTTGG+AGG - chr1_2:54310672-54310691 Msa0077410:CDS 60.0%
! AAAGGTGGTGGCGTTGGAGG+TGG - chr1_2:54310675-54310694 Msa0077410:intron 60.0%
! GGTGGCGTTGGAGGTGGAAT+CGG - chr1_2:54310681-54310700 Msa0077410:intron 60.0%
!! CTTGGTGGTGGTGGAGGCTT+TGG - chr1_2:54310717-54310736 Msa0077410:intron 60.0%
GGCAAAGGTGGAGGACTTGG+TGG - chr1_2:54310768-54310787 Msa0077410:intron 60.0%
!! GGTGGCGGAGGCTTTGGAAA+AGG - chr1_2:54310789-54310808 Msa0077410:intron 60.0%
!! GGCGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310792-54310811 Msa0077410:intron 60.0%
! GGTGGTGTTGGAGGTGGCAT+TGG - chr1_2:54310813-54310832 Msa0077410:CDS 60.0%
!! GGTGGCGGAGGCTTTGGAAA+AGG - chr1_2:54310789-54310808 Msa0077410:intron 60.0%
!! GGCGGAGGCTTTGGAAAAGG+TGG - chr1_2:54310792-54310811 Msa0077410:intron 60.0%
! GGTGGTGTTGGAGGTGGCAT+TGG - chr1_2:54310813-54310832 Msa0077410:CDS 60.0%
!! GGAAAAGGTGGTGGGGTTGG+AGG - chr1_2:54310936-54310955 Msa0077410:CDS 60.0%
!! AAAGGTGGTGGGGTTGGAGG+TGG - chr1_2:54310939-54310958 Msa0077410:CDS 60.0%
!! AAGGTGGTGGGGTTGGAGGT+GGG - chr1_2:54310940-54310959 Msa0077410:CDS 60.0%
! GGAGGTGGGATTGGCAAAGG+TGG - chr1_2:54310954-54310973 Msa0077410:CDS 60.0%
! GGTGGGATTGGCAAAGGTGG+AGG - chr1_2:54310957-54310976 Msa0077410:CDS 60.0%
! TCTGGTGGAGGTGGTGGTGT+TGG - chr1_2:54311053-54311072 Msa0077410:intron 60.0%
! GGTGGTGTTGGAGGTGGTTC+TGG - chr1_2:54311065-54311084 Msa0077410:intron 60.0%
!! GGTGTTGGAGGTGGTTCTGG+TGG - chr1_2:54311068-54311087 Msa0077410:intron 60.0%
!! GTTGGAGGTGGTTCTGGTGG+AGG - chr1_2:54311071-54311090 Msa0077410:intron 60.0%
!!! GGTGGAGGTGGTGGTTTTGG+AGG - chr1_2:54311086-54311105 Msa0077410:intron 60.0%
!!! GGAGGTGGTGGTTTTGGAGG+CGG - chr1_2:54311089-54311108 Msa0077410:intron 60.0%
!!! GGTGGTTTTGGAGGCGGTTC+TGG - chr1_2:54311095-54311114 Msa0077410:intron 60.0%
!! GGAGGTATTGGGGGTGGTTC+AGG - chr1_2:54311155-54311174 Msa0077410:CDS 60.0%
! GGTATTGGGGGTGGTTCAGG+TGG - chr1_2:54311158-54311177 Msa0077410:CDS 60.0%
ATTGGGGGTGGTTCAGGTGG+AGG - chr1_2:54311161-54311180 Msa0077410:CDS 60.0%
!! TCAGGTGGAGGTTTTGGCGG+TGG - chr1_2:54311173-54311192 Msa0077410:CDS 60.0%
!! GGAGGTTTTGGCGGTGGTGT+TGG - chr1_2:54311179-54311198 Msa0077410:CDS 60.0%
!! GGTTTTGGCGGTGGTGTTGG+AGG - chr1_2:54311182-54311201 Msa0077410:CDS 60.0%
! TTTGGCGGTGGTGTTGGAGG+AGG - chr1_2:54311185-54311204 Msa0077410:CDS 60.0%
! GTTGGAGGAGGTGGTGGTTC+TGG - chr1_2:54311197-54311216 Msa0077410:CDS 60.0%
! GGCGGCATTGGAGGTGGATT+TGG - chr1_2:54311221-54311240 Msa0077410:CDS 60.0%
!!! GGAGGTTTTGGTGGTGGTGC+TGG - chr1_2:54311251-54311270 Msa0077410:CDS 60.0%
!!! GGTTTTGGTGGTGGTGCTGG+AGG - chr1_2:54311254-54311273 Msa0077410:CDS 60.0%
!! TTTGGTGGTGGTGCTGGAGG+AGG - chr1_2:54311257-54311276 Msa0077410:CDS 60.0%
!! GGCAAAGGTGGTGGCTTTGG+AGG - chr1_2:54311308-54311327 Msa0077410:CDS 60.0%
!! GGTGGCTTTGGAGGAGGTCT+TGG - chr1_2:54311317-54311336 Msa0077410:CDS 60.0%
!! GGCTTTGGAGGAGGTCTTGG+TGG - chr1_2:54311320-54311339 Msa0077410:CDS 60.0%
GGAGGTCTTGGTGGAGGAGA+AGG - chr1_2:54311329-54311348 Msa0077410:CDS 60.0%
GGTCTTGGTGGAGGAGAAGG+AGG - chr1_2:54311332-54311351 Msa0077410:CDS 60.0%
CTTGGTGGAGGAGAAGGAGG+TGG - chr1_2:54311335-54311354 Msa0077410:intron 60.0%
GTCGGGTTTGGCAAGGGAGG+TGG - chr1_2:54310099-54310118 Msa0077410:three_prime_UTR 65.0%
! GGCAAGGGAGGTGGGTTTGG+AGG - chr1_2:54310108-54310127 Msa0077410:three_prime_UTR 65.0%
!! GGAGGTGGGTTTGGTGGTGG+AGG - chr1_2:54310126-54310145 Msa0077410:three_prime_UTR 65.0%
!! GGTGGGTTTGGTGGTGGAGG+AGG - chr1_2:54310129-54310148 Msa0077410:three_prime_UTR 65.0%
!!! GGCGGTGGTGGTTTTGGTGG+AGG - chr1_2:54310165-54310184 Msa0077410:three_prime_UTR 65.0%
GTGGTGCAGGAGGTGGAGGA+GGG - chr1_2:54310202-54310221 Msa0077410:three_prime_UTR 65.0%
GCAGGAGGTGGAGGAGGGTT+TGG - chr1_2:54310207-54310226 Msa0077410:three_prime_UTR 65.0%
GGAGGTGGAGGAGGGTTTGG+TGG - chr1_2:54310210-54310229 Msa0077410:three_prime_UTR 65.0%
!! GGTGGAGGAGGGTTTGGTGG+TGG - chr1_2:54310213-54310232 Msa0077410:three_prime_UTR 65.0%
!! GGAGGGTTTGGTGGTGGTGC+AGG - chr1_2:54310219-54310238 Msa0077410:three_prime_UTR 65.0%
!! GGGTTTGGTGGTGGTGCAGG+CGG - chr1_2:54310222-54310241 Msa0077410:three_prime_UTR 65.0%
!! TTTGGTGGTGGTGCAGGCGG+CGG - chr1_2:54310225-54310244 Msa0077410:three_prime_UTR 65.0%
GCAGGCGGCGGACATGGAAT+TGG - chr1_2:54310237-54310256 Msa0077410:three_prime_UTR 65.0%
GGCGGCGGACATGGAATTGG+AGG - chr1_2:54310240-54310259 Msa0077410:three_prime_UTR 65.0%
GGAGGTGGAGGAGGGTTTGG+TGG - chr1_2:54310210-54310229 Msa0077410:three_prime_UTR 65.0%
!! GGTGGAGGAGGGTTTGGTGG+CGG - chr1_2:54310213-54310232 Msa0077410:three_prime_UTR 65.0%
!! TTTGGTGGCGGTGGAGGTGC+CGG - chr1_2:54310273-54310292 Msa0077410:CDS 65.0%
! GGAGGAGGGCATGGGATTGG+AGG - chr1_2:54310294-54310313 Msa0077410:CDS 65.0%
! GGAGGGCATGGGATTGGAGG+TGG - chr1_2:54310297-54310316 Msa0077410:CDS 65.0%
!! GGCGGACTTGGTGGTGGGAT+AGG - chr1_2:54310333-54310352 Msa0077410:CDS 65.0%
!! GGTGGTCATGGTGGCGGCTT+CGG - chr1_2:54310411-54310430 Msa0077410:CDS 65.0%
! GGTGGTCATGGTGGGGGCAT+TGG - chr1_2:54310453-54310472 Msa0077410:CDS 65.0%
!! GGTGGGGGCATTGGCAAAGG+TGG - chr1_2:54310462-54310481 Msa0077410:CDS 65.0%
!! GGGGGCATTGGCAAAGGTGG+GGG - chr1_2:54310465-54310484 Msa0077410:CDS 65.0%
!! GGGGCATTGGCAAAGGTGGG+GGG - chr1_2:54310466-54310485 Msa0077410:CDS 65.0%
AAAGGTGGGGGGTTCGGAGG+TGG - chr1_2:54310477-54310496 Msa0077410:CDS 65.0%
! GGTGGTGTTGGAGGAGGGTC+AGG - chr1_2:54310519-54310538 Msa0077410:CDS 65.0%
! GGTGTTGGAGGAGGGTCAGG+TGG - chr1_2:54310522-54310541 Msa0077410:CDS 65.0%
GTTGGAGGAGGGTCAGGTGG+TGG - chr1_2:54310525-54310544 Msa0077410:CDS 65.0%
! GGAGGGTCAGGTGGTGGCTT+TGG - chr1_2:54310531-54310550 Msa0077410:CDS 65.0%
!! GGTGGCTTTGGAAAGGGCGG+TGG - chr1_2:54310543-54310562 Msa0077410:CDS 65.0%
! GGAAAGGGCGGTGGTGTTGG+AGG - chr1_2:54310606-54310625 Msa0077410:CDS 65.0%
! AAGGGCGGTGGTGTTGGAGG+TGG - chr1_2:54310609-54310628 Msa0077410:CDS 65.0%
GGTGGAGGTCTTGGAGGTGG+TGG - chr1_2:54310642-54310661 Msa0077410:CDS 65.0%
! GGAGGTCTTGGAGGTGGTGG+AGG - chr1_2:54310645-54310664 Msa0077410:CDS 65.0%
!! GGTGGAGGTCTTGGTGGTGG+TGG - chr1_2:54310708-54310727 Msa0077410:intron 65.0%
!! GGAGGTCTTGGTGGTGGTGG+AGG - chr1_2:54310711-54310730 Msa0077410:intron 65.0%
!! GGTGGAGGACTTGGTGGTGG+CGG - chr1_2:54310774-54310793 Msa0077410:intron 65.0%
!! CTTGGTGGTGGCGGAGGCTT+TGG - chr1_2:54310783-54310802 Msa0077410:intron 65.0%
!! GGTGGAGGACTTGGTGGTGG+CGG - chr1_2:54310774-54310793 Msa0077410:intron 65.0%
!! CTTGGTGGTGGCGGAGGCTT+TGG - chr1_2:54310783-54310802 Msa0077410:intron 65.0%
!! GGTGGAGGACTTGGTGGTGG+TGG - chr1_2:54310774-54310793 Msa0077410:intron 65.0%
!! GGAGGACTTGGTGGTGGTGG+AGG - chr1_2:54310909-54310928 Msa0077410:CDS 65.0%
GGTGGGGTTGGAGGTGGGAT+TGG - chr1_2:54310945-54310964 Msa0077410:CDS 65.0%
! GGAGGAGGTTCTGGTGGAGG+TGG - chr1_2:54311044-54311063 Msa0077410:intron 65.0%
! GGAGGTTCTGGTGGAGGTGG+TGG - chr1_2:54311047-54311066 Msa0077410:intron 65.0%
! GGTGGAGGTGGTGGTGTTGG+AGG - chr1_2:54311056-54311075 Msa0077410:intron 65.0%
! GGAGGTGGTGGTGTTGGAGG+TGG - chr1_2:54311059-54311078 Msa0077410:intron 65.0%
!! GGAGGTGGTTCTGGTGGAGG+TGG - chr1_2:54311074-54311093 Msa0077410:intron 65.0%
!! GGTGGTTCTGGTGGAGGTGG+TGG - chr1_2:54311077-54311096 Msa0077410:intron 65.0%
! GGTGGTGTTGGAGGAGGTGG+TGG - chr1_2:54311191-54311210 Msa0077410:CDS 65.0%
!! GGAGGAGGTGGTGGTTCTGG+TGG - chr1_2:54311200-54311219 Msa0077410:CDS 65.0%
!! GGAGGTGGTGGTTCTGGTGG+CGG - chr1_2:54311203-54311222 Msa0077410:CDS 65.0%
!! GGTGGTTCTGGTGGCGGCAT+TGG - chr1_2:54311209-54311228 Msa0077410:CDS 65.0%
!! GGTTCTGGTGGCGGCATTGG+AGG - chr1_2:54311212-54311231 Msa0077410:CDS 65.0%
!! TCTGGTGGCGGCATTGGAGG+TGG - chr1_2:54311215-54311234 Msa0077410:CDS 65.0%
! GGTGGTGCTGGAGGAGGTTC+TGG - chr1_2:54311263-54311282 Msa0077410:CDS 65.0%
! GGTGCTGGAGGAGGTTCTGG+TGG - chr1_2:54311266-54311285 Msa0077410:CDS 65.0%
! GCTGGAGGAGGTTCTGGTGG+TGG - chr1_2:54311269-54311288 Msa0077410:CDS 65.0%
GGTGGAGGGTTCGGCAAAGG+TGG - chr1_2:54311296-54311315 Msa0077410:CDS 65.0%
GGAGGGTTCGGCAAAGGTGG+TGG - chr1_2:54311299-54311318 Msa0077410:CDS 65.0%
GGAGGTGGAGGCGGTGGAAT+TGG - chr1_2:54311389-54311408 Msa0077410:CDS 65.0%
GTCGGGTTTGGCAAGGGAGG+TGG - chr1_2:54310099-54310118 Msa0077410:three_prime_UTR 65.0%
! GGCAAGGGAGGTGGGTTTGG+AGG - chr1_2:54310108-54310127 Msa0077410:three_prime_UTR 65.0%
!! GGAGGTGGGTTTGGTGGTGG+AGG - chr1_2:54310126-54310145 Msa0077410:three_prime_UTR 65.0%
!! GGTGGGTTTGGTGGTGGAGG+AGG - chr1_2:54310129-54310148 Msa0077410:three_prime_UTR 65.0%
!!! GGCGGTGGTGGTTTTGGTGG+AGG - chr1_2:54310165-54310184 Msa0077410:three_prime_UTR 65.0%
GTGGTGCAGGAGGTGGAGGA+GGG - chr1_2:54310202-54310221 Msa0077410:three_prime_UTR 65.0%
GCAGGAGGTGGAGGAGGGTT+TGG - chr1_2:54310207-54310226 Msa0077410:three_prime_UTR 65.0%
GGAGGTGGAGGAGGGTTTGG+TGG - chr1_2:54310210-54310229 Msa0077410:three_prime_UTR 65.0%
!! GGTGGAGGAGGGTTTGGTGG+TGG - chr1_2:54310213-54310232 Msa0077410:three_prime_UTR 65.0%
!! GGAGGGTTTGGTGGTGGTGC+AGG - chr1_2:54310219-54310238 Msa0077410:three_prime_UTR 65.0%
!! GGGTTTGGTGGTGGTGCAGG+CGG - chr1_2:54310222-54310241 Msa0077410:three_prime_UTR 65.0%
!! TTTGGTGGTGGTGCAGGCGG+CGG - chr1_2:54310225-54310244 Msa0077410:three_prime_UTR 65.0%
GCAGGCGGCGGACATGGAAT+TGG - chr1_2:54310237-54310256 Msa0077410:three_prime_UTR 65.0%
GGCGGCGGACATGGAATTGG+AGG - chr1_2:54310240-54310259 Msa0077410:three_prime_UTR 65.0%
GGAGGTGGAGGAGGGTTTGG+TGG - chr1_2:54310210-54310229 Msa0077410:three_prime_UTR 65.0%
!! GGTGGAGGAGGGTTTGGTGG+CGG - chr1_2:54310213-54310232 Msa0077410:three_prime_UTR 65.0%
!! TTTGGTGGCGGTGGAGGTGC+CGG - chr1_2:54310273-54310292 Msa0077410:CDS 65.0%
! GGAGGAGGGCATGGGATTGG+AGG - chr1_2:54310294-54310313 Msa0077410:CDS 65.0%
! GGAGGGCATGGGATTGGAGG+TGG - chr1_2:54310297-54310316 Msa0077410:CDS 65.0%
!! GGCGGACTTGGTGGTGGGAT+AGG - chr1_2:54310333-54310352 Msa0077410:CDS 65.0%
!! GGTGGTCATGGTGGCGGCTT+CGG - chr1_2:54310411-54310430 Msa0077410:CDS 65.0%
! GGTGGTCATGGTGGGGGCAT+TGG - chr1_2:54310453-54310472 Msa0077410:CDS 65.0%
!! GGTGGGGGCATTGGCAAAGG+TGG - chr1_2:54310462-54310481 Msa0077410:CDS 65.0%
!! GGGGGCATTGGCAAAGGTGG+GGG - chr1_2:54310465-54310484 Msa0077410:CDS 65.0%
!! GGGGCATTGGCAAAGGTGGG+GGG - chr1_2:54310466-54310485 Msa0077410:CDS 65.0%
AAAGGTGGGGGGTTCGGAGG+TGG - chr1_2:54310477-54310496 Msa0077410:CDS 65.0%
! GGTGGTGTTGGAGGAGGGTC+AGG - chr1_2:54310519-54310538 Msa0077410:CDS 65.0%
! GGTGTTGGAGGAGGGTCAGG+TGG - chr1_2:54310522-54310541 Msa0077410:CDS 65.0%
GTTGGAGGAGGGTCAGGTGG+TGG - chr1_2:54310525-54310544 Msa0077410:CDS 65.0%
! GGAGGGTCAGGTGGTGGCTT+TGG - chr1_2:54310531-54310550 Msa0077410:CDS 65.0%
!! GGTGGCTTTGGAAAGGGCGG+TGG - chr1_2:54310543-54310562 Msa0077410:CDS 65.0%
! GGAAAGGGCGGTGGTGTTGG+AGG - chr1_2:54310606-54310625 Msa0077410:CDS 65.0%
! AAGGGCGGTGGTGTTGGAGG+TGG - chr1_2:54310609-54310628 Msa0077410:CDS 65.0%
GGTGGAGGTCTTGGAGGTGG+TGG - chr1_2:54310642-54310661 Msa0077410:CDS 65.0%
! GGAGGTCTTGGAGGTGGTGG+AGG - chr1_2:54310645-54310664 Msa0077410:CDS 65.0%
!! GGTGGAGGTCTTGGTGGTGG+TGG - chr1_2:54310708-54310727 Msa0077410:intron 65.0%
!! GGAGGTCTTGGTGGTGGTGG+AGG - chr1_2:54310711-54310730 Msa0077410:intron 65.0%
!! GGTGGAGGACTTGGTGGTGG+CGG - chr1_2:54310774-54310793 Msa0077410:intron 65.0%
!! CTTGGTGGTGGCGGAGGCTT+TGG - chr1_2:54310783-54310802 Msa0077410:intron 65.0%
!! GGTGGAGGACTTGGTGGTGG+CGG - chr1_2:54310774-54310793 Msa0077410:intron 65.0%
!! CTTGGTGGTGGCGGAGGCTT+TGG - chr1_2:54310783-54310802 Msa0077410:intron 65.0%
!! GGTGGAGGACTTGGTGGTGG+TGG - chr1_2:54310774-54310793 Msa0077410:intron 65.0%
!! GGAGGACTTGGTGGTGGTGG+AGG - chr1_2:54310909-54310928 Msa0077410:CDS 65.0%
GGTGGGGTTGGAGGTGGGAT+TGG - chr1_2:54310945-54310964 Msa0077410:CDS 65.0%
! GGAGGAGGTTCTGGTGGAGG+TGG - chr1_2:54311044-54311063 Msa0077410:intron 65.0%
! GGAGGTTCTGGTGGAGGTGG+TGG - chr1_2:54311047-54311066 Msa0077410:intron 65.0%
! GGTGGAGGTGGTGGTGTTGG+AGG - chr1_2:54311056-54311075 Msa0077410:intron 65.0%
! GGAGGTGGTGGTGTTGGAGG+TGG - chr1_2:54311059-54311078 Msa0077410:intron 65.0%
!! GGAGGTGGTTCTGGTGGAGG+TGG - chr1_2:54311074-54311093 Msa0077410:intron 65.0%
!! GGTGGTTCTGGTGGAGGTGG+TGG - chr1_2:54311077-54311096 Msa0077410:intron 65.0%
! GGTGGTGTTGGAGGAGGTGG+TGG - chr1_2:54311191-54311210 Msa0077410:CDS 65.0%
!! GGAGGAGGTGGTGGTTCTGG+TGG - chr1_2:54311200-54311219 Msa0077410:CDS 65.0%
!! GGAGGTGGTGGTTCTGGTGG+CGG - chr1_2:54311203-54311222 Msa0077410:CDS 65.0%
!! GGTGGTTCTGGTGGCGGCAT+TGG - chr1_2:54311209-54311228 Msa0077410:CDS 65.0%
!! GGTTCTGGTGGCGGCATTGG+AGG - chr1_2:54311212-54311231 Msa0077410:CDS 65.0%
!! TCTGGTGGCGGCATTGGAGG+TGG - chr1_2:54311215-54311234 Msa0077410:CDS 65.0%
! GGTGGTGCTGGAGGAGGTTC+TGG - chr1_2:54311263-54311282 Msa0077410:CDS 65.0%
! GGTGCTGGAGGAGGTTCTGG+TGG - chr1_2:54311266-54311285 Msa0077410:CDS 65.0%
! GCTGGAGGAGGTTCTGGTGG+TGG - chr1_2:54311269-54311288 Msa0077410:CDS 65.0%
GGTGGAGGGTTCGGCAAAGG+TGG - chr1_2:54311296-54311315 Msa0077410:CDS 65.0%
GGAGGGTTCGGCAAAGGTGG+TGG - chr1_2:54311299-54311318 Msa0077410:CDS 65.0%
GGAGGTGGAGGCGGTGGAAT+TGG - chr1_2:54311389-54311408 Msa0077410:CDS 65.0%
!! GGTGGTGGAGGAGGAGCTGG+TGG - chr1_2:54310138-54310157 Msa0077410:three_prime_UTR 70.0%
GGTGGAGGAGGAGCTGGTGG+TGG - chr1_2:54310141-54310160 Msa0077410:three_prime_UTR 70.0%
!! GGAGGAGGAGCTGGTGGTGG+CGG - chr1_2:54310144-54310163 Msa0077410:three_prime_UTR 70.0%
!! GGTGGCGGCGGTGGTGGTTT+TGG - chr1_2:54310159-54310178 Msa0077410:three_prime_UTR 70.0%
!!! GGCGGCGGTGGTGGTTTTGG+TGG - chr1_2:54310162-54310181 Msa0077410:three_prime_UTR 70.0%
! GGTGGTGGTGCAGGAGGTGG+AGG - chr1_2:54310198-54310217 Msa0077410:three_prime_UTR 70.0%
GGTGGTGCAGGAGGTGGAGG+AGG - chr1_2:54310201-54310220 Msa0077410:three_prime_UTR 70.0%
!! GGAGGAGGGTTTGGTGGCGG+TGG - chr1_2:54310264-54310283 Msa0077410:CDS 70.0%
!! GGAGGGTTTGGTGGCGGTGG+AGG - chr1_2:54310267-54310286 Msa0077410:CDS 70.0%
!! GAGGTGCCGGAGGAGGGCAT+GGG - chr1_2:54310286-54310305 Msa0077410:CDS 70.0%
! GCCGGAGGAGGGCATGGGAT+TGG - chr1_2:54310291-54310310 Msa0077410:CDS 70.0%
GGAAAAGGTGGGGGGGCTGG+TGG - chr1_2:54310354-54310373 Msa0077410:CDS 70.0%
! AAAGGTGGGGGGGCTGGTGG+AGG - chr1_2:54310357-54310376 Msa0077410:CDS 70.0%
! GGTGGCGGCTTCGGAAAGGG+TGG - chr1_2:54310420-54310439 Msa0077410:CDS 70.0%
GGCGGCTTCGGAAAGGGTGG+AGG - chr1_2:54310423-54310442 Msa0077410:CDS 70.0%
GGCAAAGGTGGGGGGTTCGG+AGG - chr1_2:54310474-54310493 Msa0077410:CDS 70.0%
! GGAAAGGGCGGTGGCCTTGG+AGG - chr1_2:54310552-54310571 Msa0077410:CDS 70.0%
! AAGGGCGGTGGCCTTGGAGG+TGG - chr1_2:54310555-54310574 Msa0077410:CDS 70.0%
!! GGAGGACTTGGTGGTGGCGG+AGG - chr1_2:54310777-54310796 Msa0077410:intron 70.0%
!! GGAGGACTTGGTGGTGGCGG+AGG - chr1_2:54310777-54310796 Msa0077410:intron 70.0%
! GGCGGTGGTGTTGGAGGAGG+TGG - chr1_2:54311188-54311207 Msa0077410:CDS 70.0%
!! GGTGGAGGGTTTGGTGGCGG+TGG - chr1_2:54311362-54311381 Msa0077410:intron 70.0%
!! GGAGGGTTTGGTGGCGGTGG+CGG - chr1_2:54310267-54310286 Msa0077410:CDS 70.0%
!! TTTGGTGGCGGTGGCGGAGG+AGG - chr1_2:54311371-54311390 Msa0077410:CDS 70.0%
!! GGTGGTGGAGGAGGAGCTGG+TGG - chr1_2:54310138-54310157 Msa0077410:three_prime_UTR 70.0%
GGTGGAGGAGGAGCTGGTGG+TGG - chr1_2:54310141-54310160 Msa0077410:three_prime_UTR 70.0%
!! GGAGGAGGAGCTGGTGGTGG+CGG - chr1_2:54310144-54310163 Msa0077410:three_prime_UTR 70.0%
!! GGTGGCGGCGGTGGTGGTTT+TGG - chr1_2:54310159-54310178 Msa0077410:three_prime_UTR 70.0%
!!! GGCGGCGGTGGTGGTTTTGG+TGG - chr1_2:54310162-54310181 Msa0077410:three_prime_UTR 70.0%
! GGTGGTGGTGCAGGAGGTGG+AGG - chr1_2:54310198-54310217 Msa0077410:three_prime_UTR 70.0%
GGTGGTGCAGGAGGTGGAGG+AGG - chr1_2:54310201-54310220 Msa0077410:three_prime_UTR 70.0%
!! GGAGGAGGGTTTGGTGGCGG+TGG - chr1_2:54310264-54310283 Msa0077410:CDS 70.0%
!! GGAGGGTTTGGTGGCGGTGG+AGG - chr1_2:54310267-54310286 Msa0077410:CDS 70.0%
!! GAGGTGCCGGAGGAGGGCAT+GGG - chr1_2:54310286-54310305 Msa0077410:CDS 70.0%
! GCCGGAGGAGGGCATGGGAT+TGG - chr1_2:54310291-54310310 Msa0077410:CDS 70.0%
GGAAAAGGTGGGGGGGCTGG+TGG - chr1_2:54310354-54310373 Msa0077410:CDS 70.0%
! AAAGGTGGGGGGGCTGGTGG+AGG - chr1_2:54310357-54310376 Msa0077410:CDS 70.0%
! GGTGGCGGCTTCGGAAAGGG+TGG - chr1_2:54310420-54310439 Msa0077410:CDS 70.0%
GGCGGCTTCGGAAAGGGTGG+AGG - chr1_2:54310423-54310442 Msa0077410:CDS 70.0%
GGCAAAGGTGGGGGGTTCGG+AGG - chr1_2:54310474-54310493 Msa0077410:CDS 70.0%
! GGAAAGGGCGGTGGCCTTGG+AGG - chr1_2:54310552-54310571 Msa0077410:CDS 70.0%
! AAGGGCGGTGGCCTTGGAGG+TGG - chr1_2:54310555-54310574 Msa0077410:CDS 70.0%
!! GGAGGACTTGGTGGTGGCGG+AGG - chr1_2:54310777-54310796 Msa0077410:intron 70.0%
!! GGAGGACTTGGTGGTGGCGG+AGG - chr1_2:54310777-54310796 Msa0077410:intron 70.0%
! GGCGGTGGTGTTGGAGGAGG+TGG - chr1_2:54311188-54311207 Msa0077410:CDS 70.0%
!! GGTGGAGGGTTTGGTGGCGG+TGG - chr1_2:54311362-54311381 Msa0077410:intron 70.0%
!! GGAGGGTTTGGTGGCGGTGG+CGG - chr1_2:54310267-54310286 Msa0077410:CDS 70.0%
!! TTTGGTGGCGGTGGCGGAGG+AGG - chr1_2:54311371-54311390 Msa0077410:CDS 70.0%
!! GGAGGAGCTGGTGGTGGCGG+CGG - chr1_2:54310147-54310166 Msa0077410:three_prime_UTR 75.0%
GGTGGTGCAGGCGGCGGACA+TGG - chr1_2:54310231-54310250 Msa0077410:three_prime_UTR 75.0%
!! GCGGTGGAGGTGCCGGAGGA+GGG - chr1_2:54310280-54310299 Msa0077410:CDS 75.0%
!! GGAGGTGCCGGAGGAGGGCA+TGG - chr1_2:54310285-54310304 Msa0077410:CDS 75.0%
GGTGGGGGGTTCGGAGGTGG+TGG - chr1_2:54310480-54310499 Msa0077410:CDS 75.0%
! GGGGGGTTCGGAGGTGGTGG+TGG - chr1_2:54310483-54310502 Msa0077410:CDS 75.0%
!! GGGTTTGGTGGCGGTGGCGG+AGG - chr1_2:54311368-54311387 Msa0077410:CDS 75.0%
!! GGTGGCGGAGGAGGTGGAGG+CGG - chr1_2:54311380-54311399 Msa0077410:CDS 75.0%
!! GGAGGAGCTGGTGGTGGCGG+CGG - chr1_2:54310147-54310166 Msa0077410:three_prime_UTR 75.0%
GGTGGTGCAGGCGGCGGACA+TGG - chr1_2:54310231-54310250 Msa0077410:three_prime_UTR 75.0%
!! GCGGTGGAGGTGCCGGAGGA+GGG - chr1_2:54310280-54310299 Msa0077410:CDS 75.0%
!! GGAGGTGCCGGAGGAGGGCA+TGG - chr1_2:54310285-54310304 Msa0077410:CDS 75.0%
GGTGGGGGGTTCGGAGGTGG+TGG - chr1_2:54310480-54310499 Msa0077410:CDS 75.0%
! GGGGGGTTCGGAGGTGGTGG+TGG - chr1_2:54310483-54310502 Msa0077410:CDS 75.0%
!! GGGTTTGGTGGCGGTGGCGG+AGG - chr1_2:54311368-54311387 Msa0077410:CDS 75.0%
!! GGTGGCGGAGGAGGTGGAGG+CGG - chr1_2:54311380-54311399 Msa0077410:CDS 75.0%
!!! GGAGCTGGTGGTGGCGGCGG+TGG - chr1_2:54310150-54310169 Msa0077410:three_prime_UTR 80.0%
!!! GCTGGTGGTGGCGGCGGTGG+TGG - chr1_2:54310153-54310172 Msa0077410:three_prime_UTR 80.0%
!!! GGTGGCGGTGGAGGTGCCGG+AGG - chr1_2:54310276-54310295 Msa0077410:CDS 80.0%
!!! GGCGGTGGAGGTGCCGGAGG+AGG - chr1_2:54310279-54310298 Msa0077410:CDS 80.0%
!! GGTGGGGGGGCTGGTGGAGG+TGG - chr1_2:54310360-54310379 Msa0077410:CDS 80.0%
!! GGGGGGGCTGGTGGAGGTGG+TGG - chr1_2:54310363-54310382 Msa0077410:CDS 80.0%
!!! GGTGGCGGTGGCGGAGGAGG+TGG - chr1_2:54311374-54311393 Msa0077410:CDS 80.0%
!!! GGCGGTGGCGGAGGAGGTGG+AGG - chr1_2:54311377-54311396 Msa0077410:CDS 80.0%
! GGCGGAGGAGGTGGAGGCGG+TGG - chr1_2:54311383-54311402 Msa0077410:CDS 80.0%
!!! GGAGCTGGTGGTGGCGGCGG+TGG - chr1_2:54310150-54310169 Msa0077410:three_prime_UTR 80.0%
!!! GCTGGTGGTGGCGGCGGTGG+TGG - chr1_2:54310153-54310172 Msa0077410:three_prime_UTR 80.0%
!!! GGTGGCGGTGGAGGTGCCGG+AGG - chr1_2:54310276-54310295 Msa0077410:CDS 80.0%
!!! GGCGGTGGAGGTGCCGGAGG+AGG - chr1_2:54310279-54310298 Msa0077410:CDS 80.0%
!! GGTGGGGGGGCTGGTGGAGG+TGG - chr1_2:54310360-54310379 Msa0077410:CDS 80.0%
!! GGGGGGGCTGGTGGAGGTGG+TGG - chr1_2:54310363-54310382 Msa0077410:CDS 80.0%
!!! GGTGGCGGTGGCGGAGGAGG+TGG - chr1_2:54311374-54311393 Msa0077410:CDS 80.0%
!!! GGCGGTGGCGGAGGAGGTGG+AGG - chr1_2:54311377-54311396 Msa0077410:CDS 80.0%
! GGCGGAGGAGGTGGAGGCGG+TGG - chr1_2:54311383-54311402 Msa0077410:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 54310069 54311613 54310069 ID=Msa0077410;Name=Msa0077410
chr1_2 mRNA 54310069 54311613 54310069 ID=Msa0077410-mRNA-1;Parent=Msa0077410;Name=Msa0077410-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.33|0.25|0.5|0|0|4|192|390
chr1_2 exon 54310069 54310691 54310069 ID=Msa0077410-mRNA-1:exon:16811;Parent=Msa0077410-mRNA-1
chr1_2 exon 54310806 54311054 54310806 ID=Msa0077410-mRNA-1:exon:16810;Parent=Msa0077410-mRNA-1
chr1_2 exon 54311106 54311351 54311106 ID=Msa0077410-mRNA-1:exon:16809;Parent=Msa0077410-mRNA-1
chr1_2 exon 54311367 54311613 54311367 ID=Msa0077410-mRNA-1:exon:16808;Parent=Msa0077410-mRNA-1
chr1_2 CDS 54311367 54311613 54311367 ID=Msa0077410-mRNA-1:cds;Parent=Msa0077410-mRNA-1
chr1_2 CDS 54311106 54311351 54311106 ID=Msa0077410-mRNA-1:cds;Parent=Msa0077410-mRNA-1
chr1_2 CDS 54310806 54311054 54310806 ID=Msa0077410-mRNA-1:cds;Parent=Msa0077410-mRNA-1
chr1_2 CDS 54310261 54310691 54310261 ID=Msa0077410-mRNA-1:cds;Parent=Msa0077410-mRNA-1
chr1_2 three_prime_UTR 54310069 54310260 54310069 ID=Msa0077410-mRNA-1:three_prime_utr;Parent=Msa0077410-mRNA-1
Gene Sequence

>Msa0077410

AATGTAAAGAATGAAGATGAGAAAAACCTTGTCGGGTTTGGCAAGGGAGGTGGGTTTGGAGGTGGGTTTGGTGGTGGAGGAGGAGCTGGTGGTGGCGGCGGTGGTGGTTTTGGTGGAGGAGGAGGATTTGGTGGTGGTGCAGGAGGTGGAGGAGGGTTTGGTGGTGGTGCAGGCGGCGGACATGGAATTGGAGGTGGAGGAGGGTTTGGTGGCGGTGGAGGTGCCGGAGGAGGGCATGGGATTGGAGGTGGCGGACTTGGTGGTGGGATAGGAAAAGGTGGGGGGGCTGGTGGAGGTGGTGGATTTGGAAAAGGTGGAGGACTTGGAGGTGGTCATGGTGGCGGCTTCGGAAAGGGTGGAGGACTTGGAGGTGGTCATGGTGGGGGCATTGGCAAAGGTGGGGGGTTCGGAGGTGGTGGTGGAATTGGCAAAGGTGGTGGTGTTGGAGGAGGGTCAGGTGGTGGCTTTGGAAAGGGCGGTGGCCTTGGAGGTGGTGGAATTGGCAAAGGTGGAGGTCTTGGAGGTGGTGGAGGCTTTGGAAAAGGTGGTGGCGTTGGAGGTGGAATCGGAAAAGGTGGAGGTCTTGGTGGTGGTGGAGGCTTTGGAAAAGGTGGTGGTGTTGGTGGTGGAATTGGCAAAGGTGGAGGACTTGGTGGTGGCGGAGGCTTTGGAAAAGGTGGTGGTGTTGGAGGTGGCATTGGAAAAGGTGGAGGACTTGGTGGTGGCGGAGGCTTTGGAAAAGGTGGTGGCATTGGAGGTGGAATCGGTAAAGGTGGAGGTTTAGGTGGTGGTATTGGAGGAGGTTCTGGTGGAGGTGGTGGTGTTGGAGGTGGTTCTGGTGGAGGTGGTGGTTTTGGAGGCGGTTCTGGTACTGGAATTGGTGGTGGAATCGGAAAAGGTTTTGGTGGAGGTATTGGGGGTGGTTCAGGTGGAGGTTTTGGCGGTGGTGTTGGAGGAGGTGGTGGTTCTGGTGGCGGCATTGGAGGTGGATTTGGCAAAGGTGGAGGTTTTGGTGGTGGTGCTGGAGGAGGTTCTGGTGGTGGTATTGGTGGAGGGTTCGGCAAAGGTGGTGGCTTTGGAGGAGGTCTTGGTGGAGGAGAAGGAGGTGGTTTTGGTGGAGGGTTTGGTGGCGGTGGCGGAGGAGGTGGAGGCGGTGGAATTGGACACCACTGA
Protein sequence

>Msa0077410

NVKNEDEKNLVGFGKGGGFGGGFGGGGGAGGGGGGGFGGGGGFGGGAGGGGGFGGGAGGGHGIGGGGGFGGGGGAGGGHGIGGGGLGGGIGKGGGAGGGGGFGKGGGLGGGHGGGFGKGGGLGGGHGGGIGKGGGFGGGGGIGKGGGVGGGSGGGFGKGGGLGGGGIGKGGGLGGGGGFGKGGGVGGGIGKGGGLGGGGGFGKGGGVGGGIGKGGGLGGGGGFGKGGGVGGGIGKGGGLGGGGGFGKGGGIGGGIGKGGGLGGGIGGGSGGGGGVGGGSGGGGGFGGGSGTGIGGGIGKGFGGGIGGGSGGGFGGGVGGGGGSGGGIGGGFGKGGGFGGGAGGGSGGGIGGGFGKGGGFGGGLGGGEGGGFGGGFGGGGGGGGGGGIGHH*