Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765510 | sp|Q9ZVH4|CUL3A_ARATH | 74.044 | 732 | 190 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765510 | G7KDU2 | 95.355 | 732 | 34 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1446 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010770 | Msa0765510 | 0.800525 | 1.383391e-48 | -8.615850e-47 |
| Msa0012940 | Msa0765510 | 0.801201 | 1.007048e-48 | -8.615850e-47 |
| Msa0033880 | Msa0765510 | 0.807647 | 4.563487e-50 | -8.615850e-47 |
| Msa0039250 | Msa0765510 | 0.813322 | 2.714033e-51 | -8.615850e-47 |
| Msa0041690 | Msa0765510 | 0.828655 | 7.967945e-55 | -8.615850e-47 |
| Msa0057590 | Msa0765510 | 0.819570 | 1.083397e-52 | -8.615850e-47 |
| Msa0081210 | Msa0765510 | 0.801397 | 9.177613e-49 | -8.615850e-47 |
| Msa0093850 | Msa0765510 | 0.816731 | 4.753647e-52 | -8.615850e-47 |
| Msa0097950 | Msa0765510 | 0.828293 | 9.741866e-55 | -8.615850e-47 |
| Msa0106620 | Msa0765510 | 0.816233 | 6.145969e-52 | -8.615850e-47 |
| Msa0628420 | Msa0765510 | 0.826487 | 2.640153e-54 | -8.615850e-47 |
| Msa0644030 | Msa0765510 | 0.824218 | 9.090090e-54 | -8.615850e-47 |
| Msa0669180 | Msa0765510 | 0.818724 | 1.687918e-52 | -8.615850e-47 |
| Msa0694990 | Msa0765510 | 0.815400 | 9.425227e-52 | -8.615850e-47 |
| Msa0695130 | Msa0765510 | 0.844753 | 6.217954e-59 | -8.615850e-47 |
| Msa0712560 | Msa0765510 | 0.819905 | 9.083501e-53 | -8.615850e-47 |
| Msa0744100 | Msa0765510 | 0.813983 | 1.941776e-51 | -8.615850e-47 |
| Msa0765510 | Msa0788120 | 0.805221 | 1.481972e-49 | -8.615850e-47 |
| Msa0765510 | Msa0825270 | 0.813056 | 3.105380e-51 | -8.615850e-47 |
| Msa0765510 | Msa0836500 | 0.814836 | 1.257419e-51 | -8.615850e-47 |
| Msa0765510 | Msa0888940 | 0.808030 | 3.784448e-50 | -8.615850e-47 |
| Msa0765510 | Msa0945240 | 0.806802 | 6.890688e-50 | -8.615850e-47 |
| Msa0765510 | Msa1009750 | 0.800633 | 1.315188e-48 | -8.615850e-47 |
| Msa0765510 | Msa1068100 | 0.815561 | 8.680508e-52 | -8.615850e-47 |
| Msa0765510 | Msa1076560 | 0.802573 | 5.261551e-49 | -8.615850e-47 |
| Msa0765510 | Msa1088410 | 0.814147 | 1.786227e-51 | -8.615850e-47 |
| Msa0765510 | Msa1097820 | 0.805371 | 1.378706e-49 | -8.615850e-47 |
| Msa0765510 | Msa1123350 | 0.814953 | 1.184781e-51 | -8.615850e-47 |
| Msa0765510 | Msa1127590 | 0.840870 | 6.699192e-58 | -8.615850e-47 |
| Msa0765510 | Msa1206650 | 0.810852 | 9.382140e-51 | -8.615850e-47 |
| Msa0765510 | Msa1277080 | 0.801773 | 7.688379e-49 | -8.615850e-47 |
| Msa0765510 | Msa1329450 | 0.809805 | 1.577773e-50 | -8.615850e-47 |
| Msa0765510 | Msa1335160 | 0.804354 | 2.249091e-49 | -8.615850e-47 |
| Msa0765510 | Msa1344310 | 0.808081 | 3.690970e-50 | -8.615850e-47 |
| Msa0765510 | Msa1373820 | 0.817661 | 2.937237e-52 | -8.615850e-47 |
| Msa0765510 | Msa1383530 | 0.915859 | 3.566792e-85 | -8.615850e-47 |
| Msa0765510 | Msa1385810 | 0.813531 | 2.442337e-51 | -8.615850e-47 |
| Msa0765510 | Msa1409260 | 0.812574 | 3.958257e-51 | -8.615850e-47 |
| Msa0765510 | Msa1411950 | 0.832111 | 1.139099e-55 | -8.615850e-47 |
| Msa0127850 | Msa0765510 | 0.813791 | 2.140643e-51 | -8.615850e-47 |
| Msa0136120 | Msa0765510 | 0.810187 | 1.305723e-50 | -8.615850e-47 |
| Msa0138360 | Msa0765510 | 0.802990 | 4.316672e-49 | -8.615850e-47 |
| Msa0168870 | Msa0765510 | 0.813115 | 3.012928e-51 | -8.615850e-47 |
| Msa0174000 | Msa0765510 | 0.800045 | 1.732374e-48 | -8.615850e-47 |
| Msa0372810 | Msa0765510 | 0.915074 | 9.066635e-85 | -8.615850e-47 |
| Msa0378970 | Msa0765510 | 0.833371 | 5.543448e-56 | -8.615850e-47 |
| Msa0384670 | Msa0765510 | 0.818799 | 1.623046e-52 | -8.615850e-47 |
| Msa0434570 | Msa0765510 | 0.812104 | 5.013225e-51 | -8.615850e-47 |
| Msa0434770 | Msa0765510 | 0.812312 | 4.516073e-51 | -8.615850e-47 |
| Msa0450140 | Msa0765510 | 0.800151 | 1.648928e-48 | -8.615850e-47 |
| Msa0473330 | Msa0765510 | 0.809837 | 1.553328e-50 | -8.615850e-47 |
| Msa0474940 | Msa0765510 | 0.817349 | 3.452969e-52 | -8.615850e-47 |
| Msa0480780 | Msa0765510 | 0.806673 | 7.339417e-50 | -8.615850e-47 |
| Msa0241830 | Msa0765510 | 0.825050 | 5.790287e-54 | -8.615850e-47 |
| Msa0274980 | Msa0765510 | 0.811252 | 7.682271e-51 | -8.615850e-47 |
| Msa0322900 | Msa0765510 | 0.804556 | 2.041059e-49 | -8.615850e-47 |
| Msa0341690 | Msa0765510 | 0.824668 | 7.126859e-54 | -8.615850e-47 |
| Msa0363060 | Msa0765510 | 0.819721 | 1.000669e-52 | -8.615850e-47 |
| Msa0511770 | Msa0765510 | 0.825789 | 3.869685e-54 | -8.615850e-47 |
| Msa0513260 | Msa0765510 | 0.812426 | 4.266216e-51 | -8.615850e-47 |
| Msa0517640 | Msa0765510 | 0.818148 | 2.279657e-52 | -8.615850e-47 |
| Msa0518030 | Msa0765510 | 0.809932 | 1.481861e-50 | -8.615850e-47 |
| Msa0531250 | Msa0765510 | 0.828517 | 8.603531e-55 | -8.615850e-47 |
| Msa0547990 | Msa0765510 | 0.822435 | 2.372394e-53 | -8.615850e-47 |
| Msa0588090 | Msa0765510 | 0.821570 | 3.764525e-53 | -8.615850e-47 |
| Msa0593700 | Msa0765510 | 0.809390 | 1.938050e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765510 | MtrunA17_Chr5g0416711 | 95.355 | 732 | 34 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1446 |
| Msa0765510 | MtrunA17_Chr8g0361901 | 80.874 | 732 | 139 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1242 |
| Msa0765510 | MtrunA17_Chr1g0166181 | 77.793 | 725 | 155 | 3 | 11 | 732 | 18 | 739 | 0.0 | 1159 |
| Msa0765510 | MtrunA17_Chr1g0166131 | 77.103 | 725 | 160 | 3 | 11 | 732 | 19 | 740 | 0.0 | 1133 |
| Msa0765510 | MtrunA17_Chr6g0453061 | 70.919 | 729 | 211 | 1 | 5 | 732 | 2 | 730 | 0.0 | 1089 |
| Msa0765510 | MtrunA17_Chr6g0453081 | 68.176 | 729 | 231 | 1 | 5 | 732 | 2 | 730 | 0.0 | 1040 |
| Msa0765510 | MtrunA17_Chr7g0231701 | 75.441 | 680 | 156 | 2 | 53 | 732 | 40 | 708 | 0.0 | 1039 |
| Msa0765510 | MtrunA17_Chr1g0166141 | 78.763 | 598 | 125 | 1 | 137 | 732 | 77 | 674 | 0.0 | 966 |
| Msa0765510 | MtrunA17_Chr1g0166141 | 82.895 | 76 | 13 | 0 | 278 | 353 | 1 | 76 | 3.99e-33 | 135 |
| Msa0765510 | MtrunA17_Chr7g0231741 | 97.333 | 375 | 10 | 0 | 358 | 732 | 1 | 375 | 0.0 | 760 |
| Msa0765510 | MtrunA17_Chr7g0231751 | 92.581 | 310 | 23 | 0 | 1 | 310 | 1 | 310 | 0.0 | 593 |
| Msa0765510 | MtrunA17_Chr5g0416731 | 66.184 | 414 | 95 | 2 | 53 | 421 | 25 | 438 | 0.0 | 528 |
| Msa0765510 | MtrunA17_Chr2g0285881 | 41.061 | 716 | 401 | 12 | 24 | 732 | 91 | 792 | 1.16e-170 | 509 |
| Msa0765510 | MtrunA17_Chr5g0416831 | 72.699 | 326 | 52 | 2 | 407 | 732 | 1 | 289 | 2.48e-164 | 474 |
| Msa0765510 | MtrunA17_Chr5g0416691 | 58.065 | 403 | 163 | 3 | 332 | 732 | 3 | 401 | 4.91e-164 | 478 |
| Msa0765510 | MtrunA17_Chr7g0231791 | 57.816 | 403 | 164 | 3 | 332 | 732 | 3 | 401 | 3.15e-162 | 474 |
| Msa0765510 | MtrunA17_Chr7g0231721 | 70.213 | 329 | 91 | 2 | 53 | 380 | 25 | 347 | 1.47e-155 | 455 |
| Msa0765510 | MtrunA17_Chr5g0416901 | 66.562 | 317 | 105 | 1 | 55 | 371 | 21 | 336 | 3.78e-142 | 420 |
| Msa0765510 | MtrunA17_Chr7g0231581 | 65.815 | 313 | 106 | 1 | 59 | 371 | 1 | 312 | 8.40e-139 | 410 |
| Msa0765510 | MtrunA17_Chr2g0296381 | 34.290 | 732 | 438 | 15 | 32 | 732 | 23 | 742 | 2.10e-125 | 391 |
| Msa0765510 | MtrunA17_Chr4g0067011 | 33.789 | 731 | 443 | 14 | 32 | 732 | 25 | 744 | 2.34e-121 | 380 |
| Msa0765510 | MtrunA17_Chr7g0231571 | 68.699 | 246 | 76 | 1 | 59 | 304 | 1 | 245 | 1.21e-109 | 333 |
| Msa0765510 | MtrunA17_Chr5g0416911 | 66.800 | 250 | 82 | 1 | 55 | 304 | 5 | 253 | 1.64e-107 | 328 |
| Msa0765510 | MtrunA17_Chr1g0166151 | 69.565 | 184 | 55 | 1 | 83 | 266 | 1 | 183 | 2.17e-81 | 257 |
| Msa0765510 | MtrunA17_Chr7g0268881 | 40.050 | 397 | 216 | 7 | 347 | 732 | 4 | 389 | 1.11e-80 | 262 |
| Msa0765510 | MtrunA17_Chr7g0231801 | 50.996 | 251 | 121 | 2 | 59 | 307 | 1 | 251 | 7.56e-75 | 242 |
| Msa0765510 | MtrunA17_Chr5g0416681 | 50.996 | 251 | 121 | 2 | 59 | 307 | 1 | 251 | 4.05e-74 | 240 |
| Msa0765510 | MtrunA17_Chr5g0416931 | 70.303 | 165 | 49 | 0 | 53 | 217 | 38 | 202 | 1.05e-73 | 237 |
| Msa0765510 | MtrunA17_Chr7g0231561 | 68.323 | 161 | 51 | 0 | 59 | 219 | 1 | 161 | 2.00e-70 | 227 |
| Msa0765510 | MtrunA17_Chr5g0416841 | 70.526 | 95 | 28 | 0 | 203 | 297 | 10 | 104 | 1.90e-39 | 140 |
| Msa0765510 | MtrunA17_Chr7g0268891 | 27.742 | 310 | 207 | 5 | 26 | 320 | 9 | 316 | 1.83e-34 | 134 |
| Msa0765510 | MtrunA17_Chr7g0231711 | 68.519 | 54 | 16 | 1 | 1 | 54 | 1 | 53 | 1.37e-17 | 77.8 |
| Msa0765510 | MtrunA17_Chr5g0416721 | 61.111 | 54 | 21 | 0 | 1 | 54 | 1 | 54 | 2.47e-16 | 73.9 |
| Msa0765510 | MtrunA17_Chr7g0231731 | 59.259 | 54 | 22 | 0 | 1 | 54 | 1 | 54 | 4.99e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0765510 | AT1G26830.1 | 74.044 | 732 | 190 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1162 |
| Msa0765510 | AT1G69670.1 | 72.131 | 732 | 204 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1133 |
| Msa0765510 | AT1G69670.2 | 72.131 | 732 | 204 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1133 |
| Msa0765510 | AT5G46210.1 | 40.325 | 739 | 419 | 13 | 1 | 732 | 69 | 792 | 1.32e-163 | 492 |
| Msa0765510 | AT4G02570.4 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 1.03e-125 | 392 |
| Msa0765510 | AT4G02570.2 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 1.03e-125 | 392 |
| Msa0765510 | AT4G02570.1 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 1.03e-125 | 392 |
| Msa0765510 | AT4G02570.3 | 34.177 | 711 | 424 | 13 | 52 | 732 | 42 | 738 | 1.03e-125 | 392 |
| Msa0765510 | AT1G02980.1 | 32.123 | 716 | 437 | 15 | 51 | 732 | 42 | 742 | 5.44e-109 | 348 |
| Msa0765510 | AT1G02980.2 | 32.123 | 716 | 437 | 15 | 51 | 732 | 42 | 742 | 5.44e-109 | 348 |
| Msa0765510 | AT1G43140.1 | 32.528 | 704 | 419 | 15 | 52 | 732 | 51 | 721 | 6.71e-102 | 329 |
| Msa0765510 | AT1G59790.2 | 26.829 | 328 | 216 | 9 | 52 | 366 | 48 | 364 | 1.02e-26 | 113 |
| Msa0765510 | AT1G59790.1 | 26.398 | 322 | 213 | 9 | 51 | 359 | 47 | 357 | 6.69e-25 | 107 |
| Msa0765510 | AT1G59800.1 | 25.980 | 204 | 145 | 3 | 52 | 251 | 43 | 244 | 1.25e-18 | 86.7 |
| Msa0765510 | AT3G46910.1 | 25.000 | 240 | 151 | 7 | 14 | 229 | 10 | 244 | 1.34e-12 | 68.9 |
Find 173 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTAGGTCCTTCTGTTTA+TGG | 0.117167 | 5_2:+26580985 | Msa0765510:CDS |
| ACAGGATCCTTCAACCTTTC+AGG | 0.147657 | 5_2:-26581396 | None:intergenic |
| AATATGGTTCTTCACAAATT+TGG | 0.179774 | 5_2:+26580601 | Msa0765510:CDS |
| CACTCAAGGAAGTTCCTTTC+TGG | 0.187285 | 5_2:+26580696 | Msa0765510:CDS |
| TTTATTGAGTGCTGTGGTTC+TGG | 0.191669 | 5_2:+26581072 | Msa0765510:CDS |
| TCGACTGTTGAATATGCTTT+TGG | 0.245448 | 5_2:+26580888 | Msa0765510:CDS |
| ATTGACGTGGCAAACTAATA+TGG | 0.248034 | 5_2:+26582031 | Msa0765510:CDS |
| ACGTCAATTTCCTGCCATTA+TGG | 0.248558 | 5_2:-26582016 | None:intergenic |
| ATTCAACAAGATTATAGATT+TGG | 0.266006 | 5_2:+26581455 | Msa0765510:CDS |
| TTAATCTATAAGGAGTCTTC+TGG | 0.270183 | 5_2:+26581228 | Msa0765510:CDS |
| TTAGCTTTGAAGAGCTTTAC+AGG | 0.270979 | 5_2:+26577981 | Msa0765510:CDS |
| TGATGATAAATATGAAGATT+TGG | 0.279943 | 5_2:+26581269 | Msa0765510:CDS |
| TCACTATTGCTGCTTCAATC+TGG | 0.281451 | 5_2:-26582424 | None:intergenic |
| GTTGTGCTCAAGTTGCTTCC+TGG | 0.283417 | 5_2:-26582459 | None:intergenic |
| AATTGGTAAGCTTGTTTGTT+TGG | 0.290119 | 5_2:+26582629 | Msa0765510:three_prime_UTR |
| CACTATTGCTGCTTCAATCT+GGG | 0.291769 | 5_2:-26582423 | None:intergenic |
| CAGCACTTTGCGAGAAATTT+CGG | 0.292111 | 5_2:+26581976 | Msa0765510:CDS |
| ATAAACAGTTGTCTTCTTGA+TGG | 0.293373 | 5_2:-26580809 | None:intergenic |
| GCAGACTTAAAAGCTACTTT+TGG | 0.295841 | 5_2:+26582059 | Msa0765510:CDS |
| TTCTTTACATCCGTTGGATT+TGG | 0.302500 | 5_2:-26582527 | None:intergenic |
| GCAATCATTGGCTTTGGTTA+AGG | 0.303138 | 5_2:+26582220 | Msa0765510:CDS |
| TCAACAGTCGAGTCCTTATC+TGG | 0.305371 | 5_2:-26580876 | None:intergenic |
| CGTCAATTTCCTGCCATTAT+GGG | 0.309194 | 5_2:-26582015 | None:intergenic |
| GGAATCGGAACTGGAGAAAC+TGG | 0.315369 | 5_2:+26582367 | Msa0765510:CDS |
| ACAAAGATGCTAATGGATTT+AGG | 0.324791 | 5_2:+26580970 | Msa0765510:CDS |
| CCAATTTACCGCAAAATTAG+AGG | 0.325857 | 5_2:+26581794 | Msa0765510:CDS |
| ATGAGGAATTCAGATCTTTC+AGG | 0.328092 | 5_2:-26581500 | None:intergenic |
| CAAACAAGCTTACCAATTCT+AGG | 0.340066 | 5_2:-26582624 | None:intergenic |
| TAAGTAGAAATGAGTGTAGT+TGG | 0.340089 | 5_2:-26582811 | None:intergenic |
| GTAATCTTCGTTTCAGTTCC+AGG | 0.340515 | 5_2:-26581162 | None:intergenic |
| GGTTCTATTCCGGTATTTGC+AGG | 0.345096 | 5_2:+26581650 | Msa0765510:CDS |
| TGATAAAACTTGGATCATTC+TGG | 0.345686 | 5_2:+26577916 | Msa0765510:CDS |
| ATTTAGGTCCTTCTGTTTAT+GGG | 0.347103 | 5_2:+26580986 | Msa0765510:CDS |
| CAATCATTGGCTTTGGTTAA+GGG | 0.347835 | 5_2:+26582221 | Msa0765510:CDS |
| CAGTTGTCTTCTTGATGGTT+TGG | 0.350870 | 5_2:-26580804 | None:intergenic |
| AAGCTTCAACTGAGTTCTAT+AGG | 0.353571 | 5_2:+26581034 | Msa0765510:CDS |
| CATGCTTAGATTAATCTATA+AGG | 0.358765 | 5_2:+26581218 | Msa0765510:CDS |
| ACAAGGTTATGGTTCTATTC+CGG | 0.358842 | 5_2:+26581640 | Msa0765510:CDS |
| CGCGAAAATTCCTCTTCCTT+GGG | 0.361595 | 5_2:-26577850 | None:intergenic |
| ACGCGAAAATTCCTCTTCCT+TGG | 0.366742 | 5_2:-26577851 | None:intergenic |
| GATTACCCTTGACAAGGTTA+TGG | 0.368294 | 5_2:+26581629 | Msa0765510:CDS |
| TGGAAGAATTAAACAGAAAG+TGG | 0.370300 | 5_2:+26580716 | Msa0765510:CDS |
| GATGATAAATATGAAGATTT+GGG | 0.381206 | 5_2:+26581270 | Msa0765510:CDS |
| ATCGATATCTTGCCTAGAAT+TGG | 0.384579 | 5_2:+26582612 | Msa0765510:exon |
| AATGCCAACCACCCTGAGTT+AGG | 0.388456 | 5_2:+26581864 | Msa0765510:CDS |
| TTATTGAGTGCTGTGGTTCT+GGG | 0.394402 | 5_2:+26581073 | Msa0765510:CDS |
| GTGCCTGCAATCATTGGCTT+TGG | 0.396338 | 5_2:+26582214 | Msa0765510:CDS |
| ACTGTGCAGGTTCTGACAAC+AGG | 0.396783 | 5_2:+26581903 | Msa0765510:CDS |
| ATTGGTAAGCTTGTTTGTTT+GGG | 0.398347 | 5_2:+26582630 | Msa0765510:three_prime_UTR |
| ATCCGTTTCTTTACATCCGT+TGG | 0.402613 | 5_2:-26582533 | None:intergenic |
| CGAGGTATGGTGATAAAACT+TGG | 0.413055 | 5_2:+26577906 | Msa0765510:CDS |
| ACTTGAGCACAACAATCTTA+TGG | 0.413342 | 5_2:+26582469 | Msa0765510:CDS |
| GAAGAGGTGCCTGCAATCAT+TGG | 0.418942 | 5_2:+26582208 | Msa0765510:CDS |
| AGGAACTGTTGTTGCACAAA+AGG | 0.420428 | 5_2:+26582346 | Msa0765510:CDS |
| TAACCAAAGCCAATGATTGC+AGG | 0.428278 | 5_2:-26582217 | None:intergenic |
| AAGACAACTGTTTATGAACT+TGG | 0.439174 | 5_2:+26580817 | Msa0765510:CDS |
| AAGTATAACAAAGATGCTAA+TGG | 0.442676 | 5_2:+26580963 | Msa0765510:CDS |
| AGCTTCAACTGAGTTCTATA+GGG | 0.452068 | 5_2:+26581035 | Msa0765510:CDS |
| TCTGTTTAATTCTTCCAGAA+AGG | 0.455958 | 5_2:-26580710 | None:intergenic |
| AGCCTCTGCACAAATTCAAC+AGG | 0.456083 | 5_2:-26581414 | None:intergenic |
| GTGAAATGTACTCTGGAATA+CGG | 0.457810 | 5_2:-26581548 | None:intergenic |
| TGCACAAAAGGAATCGGAAC+TGG | 0.458457 | 5_2:+26582358 | Msa0765510:CDS |
| CATGAGTACACACATTTGAT+AGG | 0.461173 | 5_2:-26582114 | None:intergenic |
| ATATAGGAATGCTTACAATA+TGG | 0.464480 | 5_2:+26580585 | Msa0765510:intron |
| TTCTTCATTCAAACCAGATA+AGG | 0.468077 | 5_2:+26580863 | Msa0765510:CDS |
| AAGCTTCGAAAAGGTCTAAA+GGG | 0.471351 | 5_2:+26581585 | Msa0765510:CDS |
| TACTGATCCTGAAAGGTTGA+AGG | 0.474245 | 5_2:+26581389 | Msa0765510:CDS |
| TAATCTATAAGGAGTCTTCT+GGG | 0.474589 | 5_2:+26581229 | Msa0765510:CDS |
| TGATAGAGTGAGCCACTACT+TGG | 0.476648 | 5_2:+26581137 | Msa0765510:CDS |
| CAACAGATCTAGCCATCTCT+TGG | 0.478016 | 5_2:-26580669 | None:intergenic |
| TGAAATGTACTCTGGAATAC+GGG | 0.483088 | 5_2:-26581547 | None:intergenic |
| AAAGTGGGATGACCACAATA+AGG | 0.483530 | 5_2:+26580732 | Msa0765510:CDS |
| CACCTCTTCAAATCTGATGC+TGG | 0.488180 | 5_2:-26582194 | None:intergenic |
| TTGACGTGGCAAACTAATAT+GGG | 0.489497 | 5_2:+26582032 | Msa0765510:CDS |
| GAGGAAGACATTAATGTGAT+AGG | 0.490979 | 5_2:-26582789 | None:intergenic |
| AATGTTGTGTCTTGTGAACT+AGG | 0.494578 | 5_2:+26582670 | Msa0765510:three_prime_UTR |
| TACCCACAGGCTCCTTCCTA+AGG | 0.495503 | 5_2:-26582253 | None:intergenic |
| GTAGGACCATCGCCTAACTC+AGG | 0.500013 | 5_2:-26581876 | None:intergenic |
| CAGAAAGGAACTTCCTTGAG+TGG | 0.500983 | 5_2:-26580695 | None:intergenic |
| TTAAGGGAAGAAATGTCCTT+AGG | 0.501041 | 5_2:+26582237 | Msa0765510:CDS |
| CTTATACTACAAGTTGATGT+GGG | 0.502278 | 5_2:+26582830 | Msa0765510:three_prime_UTR |
| ACACATTCTATGTTAATGAC+AGG | 0.505783 | 5_2:+26582294 | Msa0765510:CDS |
| TAAGCTTCGAAAAGGTCTAA+AGG | 0.508584 | 5_2:+26581584 | Msa0765510:CDS |
| CAGTTCCAGGGTCCAAGTAG+TGG | 0.509512 | 5_2:-26581149 | None:intergenic |
| TAGTGAGGATTATGAAATCC+AGG | 0.510423 | 5_2:+26582441 | Msa0765510:CDS |
| TATTACCTCAGCACCCATAA+TGG | 0.510591 | 5_2:+26582002 | Msa0765510:CDS |
| AGGTTCTGACAACAGGGTCT+TGG | 0.511218 | 5_2:+26581910 | Msa0765510:CDS |
| GGCTGAGATGCGTCTGAATG+AGG | 0.515956 | 5_2:+26581110 | Msa0765510:CDS |
| GTAAGCTTGTTTGTTTGGGT+AGG | 0.516631 | 5_2:+26582634 | Msa0765510:three_prime_UTR |
| GATTACTACTCTGGTGGAGA+AGG | 0.517289 | 5_2:+26581179 | Msa0765510:CDS |
| TAATCTTCGTTTCAGTTCCA+GGG | 0.519743 | 5_2:-26581161 | None:intergenic |
| TGTTGTTGCACAAAAGGAAT+CGG | 0.522411 | 5_2:+26582352 | Msa0765510:CDS |
| AGATGAGTAACCCAAGGAAG+AGG | 0.525328 | 5_2:+26577840 | Msa0765510:exon |
| CAGACAAAAGCCGCTTTGCA+AGG | 0.528971 | 5_2:-26581707 | None:intergenic |
| ATCCAACGGATGTAAAGAAA+CGG | 0.530115 | 5_2:+26582531 | Msa0765510:CDS |
| ACTATTGCTGCTTCAATCTG+GGG | 0.530507 | 5_2:-26582422 | None:intergenic |
| ACCGGCGAAGTTGTTAATAG+AGG | 0.533572 | 5_2:+26580931 | Msa0765510:CDS |
| AGGTCTAAAGGGAGTTAGTG+AGG | 0.534609 | 5_2:+26581596 | Msa0765510:CDS |
| GTAGAAATGAGTGTAGTTGG+AGG | 0.536698 | 5_2:-26582808 | None:intergenic |
| CAGATATTTATTGAGTGCTG+TGG | 0.538710 | 5_2:+26581066 | Msa0765510:CDS |
| TTACATCCGTTGGATTTGGA+AGG | 0.539177 | 5_2:-26582523 | None:intergenic |
| TTTAGGTCCTTCTGTTTATG+GGG | 0.542075 | 5_2:+26580987 | Msa0765510:CDS |
| ACAAAGAGTGAAATGTACTC+TGG | 0.543670 | 5_2:-26581555 | None:intergenic |
| ACCTCAGCACCCATAATGGC+AGG | 0.544192 | 5_2:+26582006 | Msa0765510:CDS |
| AACTTGTTCAGTCGTGTCAC+CGG | 0.544635 | 5_2:+26581303 | Msa0765510:CDS |
| GTGAGCCACTACTTGGACCC+TGG | 0.545452 | 5_2:+26581144 | Msa0765510:CDS |
| CGAGAGGCTATACTCTGGGC+TGG | 0.546564 | 5_2:+26580624 | Msa0765510:CDS |
| GTAGACGATAAGCTTCGAAA+AGG | 0.549522 | 5_2:+26581576 | Msa0765510:CDS |
| GATTGAGTCTCTCCTTGAGC+GGG | 0.549775 | 5_2:+26582553 | Msa0765510:CDS |
| ACATTCTGATGTACATGGAC+AGG | 0.551895 | 5_2:+26580773 | Msa0765510:CDS |
| TGAAACGAAGATTACTACTC+TGG | 0.553950 | 5_2:+26581170 | Msa0765510:CDS |
| ATTTATGATCATAATGCTAG+TGG | 0.555562 | 5_2:+26577956 | Msa0765510:CDS |
| TTCCAGCATCAGATTTGAAG+AGG | 0.558511 | 5_2:+26582192 | Msa0765510:CDS |
| ACTTATACTACAAGTTGATG+TGG | 0.559434 | 5_2:+26582829 | Msa0765510:three_prime_UTR |
| TCCTGCCATTATGGGTGCTG+AGG | 0.559850 | 5_2:-26582007 | None:intergenic |
| GTGCTGACATTTCTGTCGGA+AGG | 0.563439 | 5_2:-26581959 | None:intergenic |
| CAATTTACCGCAAAATTAGA+GGG | 0.563610 | 5_2:+26581795 | Msa0765510:CDS |
| TGGTCCTACACTAACTGTGC+AGG | 0.566945 | 5_2:+26581890 | Msa0765510:CDS |
| TCATTTGTAATGCCTTATTG+TGG | 0.567815 | 5_2:-26580744 | None:intergenic |
| ATCGCCTAACTCAGGGTGGT+TGG | 0.569183 | 5_2:-26581868 | None:intergenic |
| CTCTTGGAGATGAGAAGTCA+TGG | 0.572652 | 5_2:-26580653 | None:intergenic |
| TGCTGATAGACTAAGCTACA+AGG | 0.574564 | 5_2:+26582148 | Msa0765510:CDS |
| TCCTCTATTAACAACTTCGC+CGG | 0.574652 | 5_2:-26580932 | None:intergenic |
| TGTCCTTAGGAAGGAGCCTG+TGG | 0.575541 | 5_2:+26582250 | Msa0765510:CDS |
| GACTTCTCATCTCCAAGAGA+TGG | 0.576415 | 5_2:+26580657 | Msa0765510:CDS |
| CAAAGTGCTGACATTTCTGT+CGG | 0.576497 | 5_2:-26581963 | None:intergenic |
| TATTGAGTGCTGTGGTTCTG+GGG | 0.577754 | 5_2:+26581074 | Msa0765510:CDS |
| GGGAAGAAATGTCCTTAGGA+AGG | 0.582948 | 5_2:+26582241 | Msa0765510:CDS |
| TTCTTCACAAATTTGGCGAG+AGG | 0.583661 | 5_2:+26580608 | Msa0765510:CDS |
| TTGGCGAGAGGCTATACTCT+GGG | 0.583670 | 5_2:+26580620 | Msa0765510:CDS |
| GGAAGAATTAAACAGAAAGT+GGG | 0.584845 | 5_2:+26580717 | Msa0765510:CDS |
| TTTGGCGAGAGGCTATACTC+TGG | 0.586097 | 5_2:+26580619 | Msa0765510:CDS |
| ATAAATATGAAGATTTGGGT+AGG | 0.586773 | 5_2:+26581274 | Msa0765510:CDS |
| TAGAGACATTCTGATGTACA+TGG | 0.588793 | 5_2:+26580768 | Msa0765510:CDS |
| AGATCTGTTGAAGCCACTCA+AGG | 0.592937 | 5_2:+26580682 | Msa0765510:CDS |
| AGAAGAAGATGAGTAACCCA+AGG | 0.593480 | 5_2:+26577834 | Msa0765510:exon |
| ACTTCATACGTCAAAGACTA+CGG | 0.595144 | 5_2:+26581354 | Msa0765510:CDS |
| GCACAACAATCTTATGGCTG+AGG | 0.595338 | 5_2:+26582475 | Msa0765510:CDS |
| ATGAACTTGGTCAGAACCTG+TGG | 0.595675 | 5_2:+26580830 | Msa0765510:CDS |
| TTCTGGGGATTATCTCAAGA+AGG | 0.597654 | 5_2:+26581089 | Msa0765510:CDS |
| GTTGTAATGGATCCGAGGTA+TGG | 0.601802 | 5_2:+26577893 | Msa0765510:CDS |
| AGCTTGTTACTGATCCTGAA+AGG | 0.602699 | 5_2:+26581382 | Msa0765510:CDS |
| ATAGAACCATAACCTTGTCA+AGG | 0.604566 | 5_2:-26581635 | None:intergenic |
| AACCACCCTGAGTTAGGCGA+TGG | 0.606334 | 5_2:+26581870 | Msa0765510:CDS |
| AATTCTTCCCCATAAACAGA+AGG | 0.608454 | 5_2:-26580994 | None:intergenic |
| AACGAAGATTACTACTCTGG+TGG | 0.609690 | 5_2:+26581173 | Msa0765510:CDS |
| TGCAGAGATTACCCTTGACA+AGG | 0.610325 | 5_2:+26581623 | Msa0765510:CDS |
| TCGCAAACATCTTTACCCAC+AGG | 0.610963 | 5_2:-26582266 | None:intergenic |
| TTAGTACACAGTGAGCGTAC+CGG | 0.613443 | 5_2:+26580913 | Msa0765510:CDS |
| TACTCTGGTGGAGAAGGAGA+TGG | 0.615285 | 5_2:+26581185 | Msa0765510:CDS |
| TAGAACCATAACCTTGTCAA+GGG | 0.616816 | 5_2:-26581634 | None:intergenic |
| CATGTCACACTAGATTGAGC+TGG | 0.619728 | 5_2:-26581933 | None:intergenic |
| GTTAAGCTGAAGACAGAATG+TGG | 0.624729 | 5_2:+26581768 | Msa0765510:CDS |
| GAGTACACACATTTGATAGG+TGG | 0.629808 | 5_2:-26582111 | None:intergenic |
| TTGTTCAGTCGTGTCACCGG+TGG | 0.648925 | 5_2:+26581306 | Msa0765510:CDS |
| TAGGACCATCGCCTAACTCA+GGG | 0.650482 | 5_2:-26581875 | None:intergenic |
| GGATTGAGTCTCTCCTTGAG+CGG | 0.650864 | 5_2:+26582552 | Msa0765510:CDS |
| ATCCTGTTGAATTTGTGCAG+AGG | 0.652724 | 5_2:+26581412 | Msa0765510:CDS |
| GCGATTCCTTCCAAATCCAA+CGG | 0.655030 | 5_2:+26582517 | Msa0765510:CDS |
| CTGTGCAGGTTCTGACAACA+GGG | 0.655678 | 5_2:+26581904 | Msa0765510:CDS |
| GTCCTTAGGAAGGAGCCTGT+GGG | 0.656948 | 5_2:+26582251 | Msa0765510:CDS |
| AGAACCTGCACAGTTAGTGT+AGG | 0.658313 | 5_2:-26581894 | None:intergenic |
| CAGTTTCTGATGATGCTGAG+AGG | 0.661049 | 5_2:+26581736 | Msa0765510:CDS |
| AGATTGAAGCAGCAATAGTG+AGG | 0.663820 | 5_2:+26582426 | Msa0765510:CDS |
| ATGTGGTTGTAATGGATCCG+AGG | 0.669826 | 5_2:+26577888 | Msa0765510:CDS |
| TTATACTACAAGTTGATGTG+GGG | 0.681618 | 5_2:+26582831 | Msa0765510:three_prime_UTR |
| GAAATGTACTCTGGAATACG+GGG | 0.691252 | 5_2:-26581546 | None:intergenic |
| TTTGAGTTGAGAGAAAATGG+TGG | 0.695166 | 5_2:-26577636 | None:intergenic |
| ACAAGCAGCACCTTGCAAAG+CGG | 0.706328 | 5_2:+26581697 | Msa0765510:CDS |
| GACCATCGCCTAACTCAGGG+TGG | 0.727453 | 5_2:-26581872 | None:intergenic |
| TGTGGGTAAAGATGTTTGCG+AGG | 0.737739 | 5_2:+26582268 | Msa0765510:CDS |
| ATAATGGCAGGAAATTGACG+TGG | 0.739143 | 5_2:+26582018 | Msa0765510:CDS |
| TTGGAGATGAGAAGTCATGG+TGG | 0.753515 | 5_2:-26580650 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTTTATAAGATATATA+GGG | + | chr5_2:26578421-26578440 | Msa0765510:intron | 10.0% |
| !! | AAAAGATGTAAATTATATTA+TGG | + | chr5_2:26579873-26579892 | Msa0765510:intron | 10.0% |
| !! | ATTCAAATAAAATTCTAATT+TGG | - | chr5_2:26579938-26579957 | None:intergenic | 10.0% |
| !!! | ACTATTTTATTTTCATTATT+AGG | - | chr5_2:26580256-26580275 | None:intergenic | 10.0% |
| !! | TTCTATAAACTATTAAATAA+AGG | - | chr5_2:26580420-26580439 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAGGAATTAATCT+AGG | + | chr5_2:26577746-26577765 | Msa0765510:intron | 15.0% |
| !!! | TGATTTCTATTATTTGTTAT+TGG | + | chr5_2:26578016-26578035 | Msa0765510:intron | 15.0% |
| !!! | CTTGTTTTTAATGATATATA+GGG | + | chr5_2:26578117-26578136 | Msa0765510:intron | 15.0% |
| !!! | TTGTTTTTAATGATATATAG+GGG | + | chr5_2:26578118-26578137 | Msa0765510:intron | 15.0% |
| !!! | GATTGTTTTATAAGATATAT+AGG | + | chr5_2:26578420-26578439 | Msa0765510:intron | 15.0% |
| !!! | AGTTAAATTGTTTTCATATA+TGG | - | chr5_2:26578568-26578587 | None:intergenic | 15.0% |
| !!! | TGAAAATATTTTGAAAACTA+TGG | - | chr5_2:26578829-26578848 | None:intergenic | 15.0% |
| !!! | GTTTTCAAAATATTTTCATA+AGG | + | chr5_2:26578831-26578850 | Msa0765510:intron | 15.0% |
| !! | TTTAGTCAAATAGAAAATTA+GGG | - | chr5_2:26578908-26578927 | None:intergenic | 15.0% |
| !! | AAAATAATTAAGATGTCATA+TGG | - | chr5_2:26579528-26579547 | None:intergenic | 15.0% |
| !! | TACTTTATTGTCTTTATTAT+GGG | + | chr5_2:26580524-26580543 | Msa0765510:intron | 15.0% |
| !! | AAACTGTATAAGATAAAAAT+AGG | + | chr5_2:26582326-26582345 | Msa0765510:CDS | 15.0% |
| !!! | TCAATTTGATGGTTTTTTTA+AGG | + | chr5_2:26577734-26577753 | Msa0765510:intron | 20.0% |
| !! | AATTAATCTAGGTTATGTAA+TGG | + | chr5_2:26577757-26577776 | Msa0765510:intron | 20.0% |
| !!! | TTTTTTTTTTGTTGCATTGT+AGG | + | chr5_2:26577789-26577808 | Msa0765510:intron | 20.0% |
| !!! | GCTTGTTTTTAATGATATAT+AGG | + | chr5_2:26578116-26578135 | Msa0765510:intron | 20.0% |
| !!! | AAGTTGTTTTTATTTGTTGT+TGG | + | chr5_2:26578312-26578331 | Msa0765510:intron | 20.0% |
| !!! | TTGTCATTGGATTTTTTTTA+GGG | + | chr5_2:26578654-26578673 | Msa0765510:intron | 20.0% |
| !!! | GGTTTTTATAATGATCAAAT+TGG | + | chr5_2:26578676-26578695 | Msa0765510:intron | 20.0% |
| !!! | AAGCAAAAATTTTCAATCTT+AGG | + | chr5_2:26578708-26578727 | Msa0765510:intron | 20.0% |
| !!! | AGCAAAAATTTTCAATCTTA+GGG | + | chr5_2:26578709-26578728 | Msa0765510:intron | 20.0% |
| !! | CTTTAGTCAAATAGAAAATT+AGG | - | chr5_2:26578909-26578928 | None:intergenic | 20.0% |
| !! | ATATGTATAGTTAACAAAGA+TGG | - | chr5_2:26579370-26579389 | None:intergenic | 20.0% |
| !! | TAGATTTCAAAAAGGAAAAT+AGG | + | chr5_2:26579474-26579493 | Msa0765510:intron | 20.0% |
| !! | AGATTTCAAAAAGGAAAATA+GGG | + | chr5_2:26579475-26579494 | Msa0765510:intron | 20.0% |
| !!! | TTTTAAAAACTCCATATTTC+AGG | + | chr5_2:26579544-26579563 | Msa0765510:intron | 20.0% |
| !! | TGTAATTAATACCTGAAATA+TGG | - | chr5_2:26579558-26579577 | None:intergenic | 20.0% |
| !! | ACATAAAAAAGTTAATTGCT+AGG | - | chr5_2:26579610-26579629 | None:intergenic | 20.0% |
| !!! | AGGAAGTATTAAATGTTTTT+AGG | - | chr5_2:26579715-26579734 | None:intergenic | 20.0% |
| !!! | CTTTTAAACCAATAATTAGA+TGG | + | chr5_2:26580330-26580349 | Msa0765510:intron | 20.0% |
| !! | TAAACTATTAAATAAAGGAG+AGG | - | chr5_2:26580415-26580434 | None:intergenic | 20.0% |
| !! | GTACTTTATTGTCTTTATTA+TGG | + | chr5_2:26580523-26580542 | Msa0765510:intron | 20.0% |
| !!! | TATTTTTCATCTTTATCTTG+TGG | + | chr5_2:26580562-26580581 | Msa0765510:intron | 20.0% |
| !! | TGATGATAAATATGAAGATT+TGG | + | chr5_2:26581269-26581288 | Msa0765510:CDS | 20.0% |
| !! | GATGATAAATATGAAGATTT+GGG | + | chr5_2:26581270-26581289 | Msa0765510:CDS | 20.0% |
| !! | ATTCAACAAGATTATAGATT+TGG | + | chr5_2:26581455-26581474 | Msa0765510:CDS | 20.0% |
| ! | TTACTGAAAAAGTGATTATG+AGG | - | chr5_2:26577675-26577694 | None:intergenic | 25.0% |
| !! | TTCTTTTCTCTTCAATTTGA+TGG | + | chr5_2:26577723-26577742 | Msa0765510:intron | 25.0% |
| ! | ATTTATGATCATAATGCTAG+TGG | + | chr5_2:26577956-26577975 | Msa0765510:CDS | 25.0% |
| !!! | TAAGTTTTGTGATACTATGT+CGG | + | chr5_2:26578177-26578196 | Msa0765510:intron | 25.0% |
| ! | AACTTATGAACAATCGTATA+AGG | - | chr5_2:26578272-26578291 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTTGTTGGTTCT+AGG | + | chr5_2:26578319-26578338 | Msa0765510:intron | 25.0% |
| !!! | ATAAGTTTTGTGAAACTGTT+TGG | + | chr5_2:26578481-26578500 | Msa0765510:intron | 25.0% |
| !!! | GTTGTCATTGGATTTTTTTT+AGG | + | chr5_2:26578653-26578672 | Msa0765510:intron | 25.0% |
| !!! | TGTCATTGGATTTTTTTTAG+GGG | + | chr5_2:26578655-26578674 | Msa0765510:intron | 25.0% |
| !! | TTGAAAATTTTTGCTTTCCT+AGG | - | chr5_2:26578704-26578723 | None:intergenic | 25.0% |
| ! | AATCTTAGGGTTTATTACTT+TGG | + | chr5_2:26578722-26578741 | Msa0765510:intron | 25.0% |
| !! | TTTATTACTTTGGAGATGTT+TGG | + | chr5_2:26578732-26578751 | Msa0765510:intron | 25.0% |
| ! | TATGACAATAAGTGATTTGA+AGG | - | chr5_2:26578858-26578877 | None:intergenic | 25.0% |
| ! | ATCTATGGTATATATCCAAA+CGG | + | chr5_2:26578990-26579009 | Msa0765510:intron | 25.0% |
| ! | TTATGATAAGATGTCATGTT+TGG | + | chr5_2:26579321-26579340 | Msa0765510:intron | 25.0% |
| !! | GCAATTGAAATGTTTTCTTT+GGG | - | chr5_2:26580011-26580030 | None:intergenic | 25.0% |
| !! | TGCAATTGAAATGTTTTCTT+TGG | - | chr5_2:26580012-26580031 | None:intergenic | 25.0% |
| ! | TATAATGTCTATGTGCAAAT+AGG | + | chr5_2:26580036-26580055 | Msa0765510:intron | 25.0% |
| ! | ATAATGTCTATGTGCAAATA+GGG | + | chr5_2:26580037-26580056 | Msa0765510:intron | 25.0% |
| ! | ATATAGGAATGCTTACAATA+TGG | + | chr5_2:26580585-26580604 | Msa0765510:intron | 25.0% |
| ! | AATATGGTTCTTCACAAATT+TGG | + | chr5_2:26580601-26580620 | Msa0765510:CDS | 25.0% |
| ! | AAGTATAACAAAGATGCTAA+TGG | + | chr5_2:26580963-26580982 | Msa0765510:CDS | 25.0% |
| ! | CATGCTTAGATTAATCTATA+AGG | + | chr5_2:26581218-26581237 | Msa0765510:CDS | 25.0% |
| ! | ATAAATATGAAGATTTGGGT+AGG | + | chr5_2:26581274-26581293 | Msa0765510:CDS | 25.0% |
| ! | GTTAATGAAAAATTCGAATG+AGG | - | chr5_2:26581520-26581539 | None:intergenic | 25.0% |
| ! | TTTTAAGCATGTGGTTGTAA+TGG | + | chr5_2:26577880-26577899 | Msa0765510:CDS | 30.0% |
| TGATAAAACTTGGATCATTC+TGG | + | chr5_2:26577916-26577935 | Msa0765510:CDS | 30.0% | |
| ! | AATGATATATAGGGGTTGAT+TGG | + | chr5_2:26578126-26578145 | Msa0765510:intron | 30.0% |
| TAATATTCTGTGACACTGTT+TGG | + | chr5_2:26578229-26578248 | Msa0765510:intron | 30.0% | |
| TAAGATATATAGGGTCTGAT+TGG | + | chr5_2:26578430-26578449 | Msa0765510:intron | 30.0% | |
| GCATATTTGAGCTTATTTAC+TGG | + | chr5_2:26578457-26578476 | Msa0765510:intron | 30.0% | |
| ATTTAACTGATAAGCACTTG+TGG | + | chr5_2:26578580-26578599 | Msa0765510:intron | 30.0% | |
| ATGACAACTAACTACAACTA+TGG | - | chr5_2:26578641-26578660 | None:intergenic | 30.0% | |
| TAGTTGTAGTTAGTTGTCAT+TGG | + | chr5_2:26578641-26578660 | Msa0765510:intron | 30.0% | |
| GAGCTTATTTGCTTATGTTA+TGG | + | chr5_2:26578757-26578776 | Msa0765510:intron | 30.0% | |
| GCTGTTAAGTTATGAATCTA+TGG | + | chr5_2:26578975-26578994 | Msa0765510:intron | 30.0% | |
| TCTATGGTATATATCCAAAC+GGG | + | chr5_2:26578991-26579010 | Msa0765510:intron | 30.0% | |
| TCACATAAGTTAATGACAGA+AGG | - | chr5_2:26579129-26579148 | None:intergenic | 30.0% | |
| TGCTTTCATATGCACAAATT+TGG | - | chr5_2:26579164-26579183 | None:intergenic | 30.0% | |
| AAGCAAATTCTATCGTTCTT+TGG | + | chr5_2:26579179-26579198 | Msa0765510:intron | 30.0% | |
| AGCAAATTCTATCGTTCTTT+GGG | + | chr5_2:26579180-26579199 | Msa0765510:intron | 30.0% | |
| TTCTTCACTCTTATGAACTA+TGG | + | chr5_2:26579275-26579294 | Msa0765510:intron | 30.0% | |
| AAAAACTCCAACCAAGAAAA+CGG | - | chr5_2:26579420-26579439 | None:intergenic | 30.0% | |
| AAAGGCTGTAGATTTCAAAA+AGG | + | chr5_2:26579466-26579485 | Msa0765510:intron | 30.0% | |
| TTAAATATTGAATGCCAGCT+TGG | - | chr5_2:26579657-26579676 | None:intergenic | 30.0% | |
| TATTATGCTGATCAAGTAGA+AGG | + | chr5_2:26579756-26579775 | Msa0765510:intron | 30.0% | |
| ATTAGAGAAAAGTCGATGTA+AGG | + | chr5_2:26579910-26579929 | Msa0765510:intron | 30.0% | |
| TGCATCTACCATCTAATTAT+TGG | - | chr5_2:26580341-26580360 | None:intergenic | 30.0% | |
| CATCTTTATCTTGTGGATAT+AGG | + | chr5_2:26580569-26580588 | Msa0765510:intron | 30.0% | |
| TCTGTTTAATTCTTCCAGAA+AGG | - | chr5_2:26580713-26580732 | None:intergenic | 30.0% | |
| TGGAAGAATTAAACAGAAAG+TGG | + | chr5_2:26580716-26580735 | Msa0765510:CDS | 30.0% | |
| GGAAGAATTAAACAGAAAGT+GGG | + | chr5_2:26580717-26580736 | Msa0765510:CDS | 30.0% | |
| ! | TCATTTGTAATGCCTTATTG+TGG | - | chr5_2:26580747-26580766 | None:intergenic | 30.0% |
| ATAAACAGTTGTCTTCTTGA+TGG | - | chr5_2:26580812-26580831 | None:intergenic | 30.0% | |
| AAGACAACTGTTTATGAACT+TGG | + | chr5_2:26580817-26580836 | Msa0765510:CDS | 30.0% | |
| TTCTTCATTCAAACCAGATA+AGG | + | chr5_2:26580863-26580882 | Msa0765510:CDS | 30.0% | |
| !! | ACAAAGATGCTAATGGATTT+AGG | + | chr5_2:26580970-26580989 | Msa0765510:CDS | 30.0% |
| ATTTAGGTCCTTCTGTTTAT+GGG | + | chr5_2:26580986-26581005 | Msa0765510:CDS | 30.0% | |
| TTAATCTATAAGGAGTCTTC+TGG | + | chr5_2:26581228-26581247 | Msa0765510:CDS | 30.0% | |
| TAATCTATAAGGAGTCTTCT+GGG | + | chr5_2:26581229-26581248 | Msa0765510:CDS | 30.0% | |
| CAATTTACCGCAAAATTAGA+GGG | + | chr5_2:26581795-26581814 | Msa0765510:CDS | 30.0% | |
| !!! | CAGACTTAAAAGCTACTTTT+GGG | + | chr5_2:26582060-26582079 | Msa0765510:CDS | 30.0% |
| ACACATTCTATGTTAATGAC+AGG | + | chr5_2:26582294-26582313 | Msa0765510:CDS | 30.0% | |
| ! | AATTGGTAAGCTTGTTTGTT+TGG | + | chr5_2:26582629-26582648 | Msa0765510:three_prime_UTR | 30.0% |
| ! | ATTGGTAAGCTTGTTTGTTT+GGG | + | chr5_2:26582630-26582649 | Msa0765510:three_prime_UTR | 30.0% |
| GTCAAAAATAGCTGATACAT+TGG | + | chr5_2:26582692-26582711 | Msa0765510:three_prime_UTR | 30.0% | |
| TAAGTAGAAATGAGTGTAGT+TGG | - | chr5_2:26582814-26582833 | None:intergenic | 30.0% | |
| !! | ACTTATACTACAAGTTGATG+TGG | + | chr5_2:26582829-26582848 | Msa0765510:three_prime_UTR | 30.0% |
| !! | CTTATACTACAAGTTGATGT+GGG | + | chr5_2:26582830-26582849 | Msa0765510:three_prime_UTR | 30.0% |
| !! | TTATACTACAAGTTGATGTG+GGG | + | chr5_2:26582831-26582850 | Msa0765510:three_prime_UTR | 30.0% |
| ! | ATGGTGGCAATTTTTCTGTT+TGG | - | chr5_2:26577623-26577642 | None:intergenic | 35.0% |
| !! | TTTGAGTTGAGAGAAAATGG+TGG | - | chr5_2:26577639-26577658 | None:intergenic | 35.0% |
| !!! | GCTTTTGAGTTGAGAGAAAA+TGG | - | chr5_2:26577642-26577661 | None:intergenic | 35.0% |
| !! | CAAGTTTTATCACCATACCT+CGG | - | chr5_2:26577908-26577927 | None:intergenic | 35.0% |
| !! | TTAGCTTTGAAGAGCTTTAC+AGG | + | chr5_2:26577981-26578000 | Msa0765510:CDS | 35.0% |
| ! | TATATAGGGGTTGATTGGAT+TGG | + | chr5_2:26578131-26578150 | Msa0765510:intron | 35.0% |
| !! | GGTGTATTTGAGCTTGTTAT+TGG | + | chr5_2:26578152-26578171 | Msa0765510:intron | 35.0% |
| TATATAGGGTCTGATTGGAT+TGG | + | chr5_2:26578435-26578454 | Msa0765510:intron | 35.0% | |
| ! | TAATGATCAAATTGGTGCCT+AGG | + | chr5_2:26578684-26578703 | Msa0765510:intron | 35.0% |
| TAAGTTAATGACAGAAGGCA+AGG | - | chr5_2:26579124-26579143 | None:intergenic | 35.0% | |
| GACACGCATGTCATAATATA+AGG | - | chr5_2:26579240-26579259 | None:intergenic | 35.0% | |
| TAGTTAACAAAGATGGTGAC+TGG | - | chr5_2:26579363-26579382 | None:intergenic | 35.0% | |
| AAAACTCCAACCAAGAAAAC+GGG | - | chr5_2:26579419-26579438 | None:intergenic | 35.0% | |
| AAGTGACATGATTATGAGTC+AGG | + | chr5_2:26579577-26579596 | Msa0765510:intron | 35.0% | |
| AAAAAGTTAATTGCTAGGCC+TGG | - | chr5_2:26579605-26579624 | None:intergenic | 35.0% | |
| TTAGGAATGTTGTGTGAATG+AGG | - | chr5_2:26579697-26579716 | None:intergenic | 35.0% | |
| !! | CAGCACTTTTTAACAACACT+GGG | - | chr5_2:26580069-26580088 | None:intergenic | 35.0% |
| !! | TCAGCACTTTTTAACAACAC+TGG | - | chr5_2:26580070-26580089 | None:intergenic | 35.0% |
| ! | CTGCATGTTATTGATAACAC+CGG | + | chr5_2:26580225-26580244 | Msa0765510:intron | 35.0% |
| ! | ATGTTATTGATAACACCGGT+AGG | + | chr5_2:26580229-26580248 | Msa0765510:intron | 35.0% |
| ! | TGTTATTGATAACACCGGTA+GGG | + | chr5_2:26580230-26580249 | Msa0765510:intron | 35.0% |
| ! | TTTTCATTATTAGGCCCTAC+CGG | - | chr5_2:26580247-26580266 | None:intergenic | 35.0% |
| GAGAGGACAATAATGAAAGT+AGG | - | chr5_2:26580398-26580417 | None:intergenic | 35.0% | |
| TTTGATGTGCACGTATCAAT+AGG | - | chr5_2:26580495-26580514 | None:intergenic | 35.0% | |
| ATTGATACGTGCACATCAAA+TGG | + | chr5_2:26580495-26580514 | Msa0765510:intron | 35.0% | |
| TAGAGACATTCTGATGTACA+TGG | + | chr5_2:26580768-26580787 | Msa0765510:CDS | 35.0% | |
| ! | TCGACTGTTGAATATGCTTT+TGG | + | chr5_2:26580888-26580907 | Msa0765510:CDS | 35.0% |
| GATTTAGGTCCTTCTGTTTA+TGG | + | chr5_2:26580985-26581004 | Msa0765510:CDS | 35.0% | |
| TTTAGGTCCTTCTGTTTATG+GGG | + | chr5_2:26580987-26581006 | Msa0765510:CDS | 35.0% | |
| AATTCTTCCCCATAAACAGA+AGG | - | chr5_2:26580997-26581016 | None:intergenic | 35.0% | |
| AAGCTTCAACTGAGTTCTAT+AGG | + | chr5_2:26581034-26581053 | Msa0765510:CDS | 35.0% | |
| AGCTTCAACTGAGTTCTATA+GGG | + | chr5_2:26581035-26581054 | Msa0765510:CDS | 35.0% | |
| ! | CAGATATTTATTGAGTGCTG+TGG | + | chr5_2:26581066-26581085 | Msa0765510:CDS | 35.0% |
| TAATCTTCGTTTCAGTTCCA+GGG | - | chr5_2:26581164-26581183 | None:intergenic | 35.0% | |
| TGAAACGAAGATTACTACTC+TGG | + | chr5_2:26581170-26581189 | Msa0765510:CDS | 35.0% | |
| ACTTCATACGTCAAAGACTA+CGG | + | chr5_2:26581354-26581373 | Msa0765510:CDS | 35.0% | |
| ATGAGGAATTCAGATCTTTC+AGG | - | chr5_2:26581503-26581522 | None:intergenic | 35.0% | |
| !! | TGAAATGTACTCTGGAATAC+GGG | - | chr5_2:26581550-26581569 | None:intergenic | 35.0% |
| !! | GTGAAATGTACTCTGGAATA+CGG | - | chr5_2:26581551-26581570 | None:intergenic | 35.0% |
| ACAAAGAGTGAAATGTACTC+TGG | - | chr5_2:26581558-26581577 | None:intergenic | 35.0% | |
| TAAGCTTCGAAAAGGTCTAA+AGG | + | chr5_2:26581584-26581603 | Msa0765510:CDS | 35.0% | |
| AAGCTTCGAAAAGGTCTAAA+GGG | + | chr5_2:26581585-26581604 | Msa0765510:CDS | 35.0% | |
| TAGAACCATAACCTTGTCAA+GGG | - | chr5_2:26581637-26581656 | None:intergenic | 35.0% | |
| ATAGAACCATAACCTTGTCA+AGG | - | chr5_2:26581638-26581657 | None:intergenic | 35.0% | |
| ! | ACAAGGTTATGGTTCTATTC+CGG | + | chr5_2:26581640-26581659 | Msa0765510:CDS | 35.0% |
| ! | CATCTTTTTCCTGCAAATAC+CGG | - | chr5_2:26581662-26581681 | None:intergenic | 35.0% |
| ! | CCTCTAATTTTGCGGTAAAT+TGG | - | chr5_2:26581797-26581816 | None:intergenic | 35.0% |
| CCAATTTACCGCAAAATTAG+AGG | + | chr5_2:26581794-26581813 | Msa0765510:CDS | 35.0% | |
| ! | AAACATGCCCTCTAATTTTG+CGG | - | chr5_2:26581805-26581824 | None:intergenic | 35.0% |
| ATTGACGTGGCAAACTAATA+TGG | + | chr5_2:26582031-26582050 | Msa0765510:CDS | 35.0% | |
| TTGACGTGGCAAACTAATAT+GGG | + | chr5_2:26582032-26582051 | Msa0765510:CDS | 35.0% | |
| !! | GCAGACTTAAAAGCTACTTT+TGG | + | chr5_2:26582059-26582078 | Msa0765510:CDS | 35.0% |
| !!! | TTAAAAGCTACTTTTGGGAG+TGG | + | chr5_2:26582065-26582084 | Msa0765510:CDS | 35.0% |
| CATGAGTACACACATTTGAT+AGG | - | chr5_2:26582117-26582136 | None:intergenic | 35.0% | |
| !! | CAATCATTGGCTTTGGTTAA+GGG | + | chr5_2:26582221-26582240 | Msa0765510:CDS | 35.0% |
| TTAAGGGAAGAAATGTCCTT+AGG | + | chr5_2:26582237-26582256 | Msa0765510:CDS | 35.0% | |
| TGTTGTTGCACAAAAGGAAT+CGG | + | chr5_2:26582352-26582371 | Msa0765510:CDS | 35.0% | |
| ACTGGATACTCAACAAAAAG+TGG | + | chr5_2:26582385-26582404 | Msa0765510:CDS | 35.0% | |
| TAGTGAGGATTATGAAATCC+AGG | + | chr5_2:26582441-26582460 | Msa0765510:CDS | 35.0% | |
| ACTTGAGCACAACAATCTTA+TGG | + | chr5_2:26582469-26582488 | Msa0765510:CDS | 35.0% | |
| TTCTTTACATCCGTTGGATT+TGG | - | chr5_2:26582530-26582549 | None:intergenic | 35.0% | |
| ATCCAACGGATGTAAAGAAA+CGG | + | chr5_2:26582531-26582550 | Msa0765510:CDS | 35.0% | |
| ATCGATATCTTGCCTAGAAT+TGG | + | chr5_2:26582612-26582631 | Msa0765510:exon | 35.0% | |
| CAAACAAGCTTACCAATTCT+AGG | - | chr5_2:26582627-26582646 | None:intergenic | 35.0% | |
| AATGTTGTGTCTTGTGAACT+AGG | + | chr5_2:26582670-26582689 | Msa0765510:three_prime_UTR | 35.0% | |
| GAGGAAGACATTAATGTGAT+AGG | - | chr5_2:26582792-26582811 | None:intergenic | 35.0% | |
| AGAAGAAGATGAGTAACCCA+AGG | + | chr5_2:26577834-26577853 | Msa0765510:exon | 40.0% | |
| ! | AAGAGGAATTTTCGCGTTGA+GGG | + | chr5_2:26577857-26577876 | Msa0765510:CDS | 40.0% |
| CGAGGTATGGTGATAAAACT+TGG | + | chr5_2:26577906-26577925 | Msa0765510:CDS | 40.0% | |
| AAAACTCGATATCAGACCCA+AGG | - | chr5_2:26578204-26578223 | None:intergenic | 40.0% | |
| ACTACAACTATGGCGATGTT+TGG | - | chr5_2:26578631-26578650 | None:intergenic | 40.0% | |
| ! | GTTCTTTGGGTTTACACGTA+GGG | + | chr5_2:26579193-26579212 | Msa0765510:intron | 40.0% |
| ! | TTCTTTGGGTTTACACGTAG+GGG | + | chr5_2:26579194-26579213 | Msa0765510:intron | 40.0% |
| ! | ACTATGGTTAGCTGTGTTAG+TGG | + | chr5_2:26579291-26579310 | Msa0765510:intron | 40.0% |
| ! | TTGTTAAGTCCCCGTTTTCT+TGG | + | chr5_2:26579406-26579425 | Msa0765510:intron | 40.0% |
| AAACTCCAACCAAGAAAACG+GGG | - | chr5_2:26579418-26579437 | None:intergenic | 40.0% | |
| ATGATTATGAGTCAGGTTCC+AGG | + | chr5_2:26579584-26579603 | Msa0765510:intron | 40.0% | |
| CGTATATTTGATTGCCAAGC+TGG | + | chr5_2:26579640-26579659 | Msa0765510:intron | 40.0% | |
| TACTTCCTACCTTAAGCAAC+TGG | + | chr5_2:26579727-26579746 | Msa0765510:intron | 40.0% | |
| ACTTCCTACCTTAAGCAACT+GGG | + | chr5_2:26579728-26579747 | Msa0765510:intron | 40.0% | |
| ATAACTCTCCCAGTTGCTTA+AGG | - | chr5_2:26579739-26579758 | None:intergenic | 40.0% | |
| GCTGATCAAGTAGAAGGATA+TGG | + | chr5_2:26579762-26579781 | Msa0765510:intron | 40.0% | |
| GTCTATGTGCAAATAGGGTT+AGG | + | chr5_2:26580042-26580061 | Msa0765510:intron | 40.0% | |
| GCGAAACTAAGATAGCATCA+CGG | - | chr5_2:26580139-26580158 | None:intergenic | 40.0% | |
| TTCTTCACAAATTTGGCGAG+AGG | + | chr5_2:26580608-26580627 | Msa0765510:CDS | 40.0% | |
| AAAGTGGGATGACCACAATA+AGG | + | chr5_2:26580732-26580751 | Msa0765510:CDS | 40.0% | |
| ACATTCTGATGTACATGGAC+AGG | + | chr5_2:26580773-26580792 | Msa0765510:CDS | 40.0% | |
| ! | CAGTTGTCTTCTTGATGGTT+TGG | - | chr5_2:26580807-26580826 | None:intergenic | 40.0% |
| ! | GAAGAACATTTTCTCTCCAC+AGG | - | chr5_2:26580849-26580868 | None:intergenic | 40.0% |
| TCCTCTATTAACAACTTCGC+CGG | - | chr5_2:26580935-26580954 | None:intergenic | 40.0% | |
| ! | TTTATTGAGTGCTGTGGTTC+TGG | + | chr5_2:26581072-26581091 | Msa0765510:CDS | 40.0% |
| ! | TTATTGAGTGCTGTGGTTCT+GGG | + | chr5_2:26581073-26581092 | Msa0765510:CDS | 40.0% |
| ! | TTCTGGGGATTATCTCAAGA+AGG | + | chr5_2:26581089-26581108 | Msa0765510:CDS | 40.0% |
| GTAATCTTCGTTTCAGTTCC+AGG | - | chr5_2:26581165-26581184 | None:intergenic | 40.0% | |
| AACGAAGATTACTACTCTGG+TGG | + | chr5_2:26581173-26581192 | Msa0765510:CDS | 40.0% | |
| !! | AGCTTGTTACTGATCCTGAA+AGG | + | chr5_2:26581382-26581401 | Msa0765510:CDS | 40.0% |
| TACTGATCCTGAAAGGTTGA+AGG | + | chr5_2:26581389-26581408 | Msa0765510:CDS | 40.0% | |
| ATCCTGTTGAATTTGTGCAG+AGG | + | chr5_2:26581412-26581431 | Msa0765510:CDS | 40.0% | |
| !! | GAAATGTACTCTGGAATACG+GGG | - | chr5_2:26581549-26581568 | None:intergenic | 40.0% |
| GTAGACGATAAGCTTCGAAA+AGG | + | chr5_2:26581576-26581595 | Msa0765510:CDS | 40.0% | |
| GATTACCCTTGACAAGGTTA+TGG | + | chr5_2:26581629-26581648 | Msa0765510:CDS | 40.0% | |
| GTTAAGCTGAAGACAGAATG+TGG | + | chr5_2:26581768-26581787 | Msa0765510:CDS | 40.0% | |
| !! | CAAAGTGCTGACATTTCTGT+CGG | - | chr5_2:26581966-26581985 | None:intergenic | 40.0% |
| CAGCACTTTGCGAGAAATTT+CGG | + | chr5_2:26581976-26581995 | Msa0765510:CDS | 40.0% | |
| TATTACCTCAGCACCCATAA+TGG | + | chr5_2:26582002-26582021 | Msa0765510:CDS | 40.0% | |
| CGTCAATTTCCTGCCATTAT+GGG | - | chr5_2:26582018-26582037 | None:intergenic | 40.0% | |
| ACGTCAATTTCCTGCCATTA+TGG | - | chr5_2:26582019-26582038 | None:intergenic | 40.0% | |
| ATAATGGCAGGAAATTGACG+TGG | + | chr5_2:26582018-26582037 | Msa0765510:CDS | 40.0% | |
| GAGTACACACATTTGATAGG+TGG | - | chr5_2:26582114-26582133 | None:intergenic | 40.0% | |
| TGCTGATAGACTAAGCTACA+AGG | + | chr5_2:26582148-26582167 | Msa0765510:CDS | 40.0% | |
| TTCCAGCATCAGATTTGAAG+AGG | + | chr5_2:26582192-26582211 | Msa0765510:CDS | 40.0% | |
| TAACCAAAGCCAATGATTGC+AGG | - | chr5_2:26582220-26582239 | None:intergenic | 40.0% | |
| !! | GCAATCATTGGCTTTGGTTA+AGG | + | chr5_2:26582220-26582239 | Msa0765510:CDS | 40.0% |
| AGGAACTGTTGTTGCACAAA+AGG | + | chr5_2:26582346-26582365 | Msa0765510:CDS | 40.0% | |
| GGATACTCAACAAAAAGTGG+AGG | + | chr5_2:26582388-26582407 | Msa0765510:CDS | 40.0% | |
| TACTCAACAAAAAGTGGAGG+AGG | + | chr5_2:26582391-26582410 | Msa0765510:CDS | 40.0% | |
| AACAAAAAGTGGAGGAGGAT+CGG | + | chr5_2:26582396-26582415 | Msa0765510:CDS | 40.0% | |
| ! | ACTATTGCTGCTTCAATCTG+GGG | - | chr5_2:26582425-26582444 | None:intergenic | 40.0% |
| ! | CACTATTGCTGCTTCAATCT+GGG | - | chr5_2:26582426-26582445 | None:intergenic | 40.0% |
| ! | TCACTATTGCTGCTTCAATC+TGG | - | chr5_2:26582427-26582446 | None:intergenic | 40.0% |
| AGATTGAAGCAGCAATAGTG+AGG | + | chr5_2:26582426-26582445 | Msa0765510:CDS | 40.0% | |
| TTACATCCGTTGGATTTGGA+AGG | - | chr5_2:26582526-26582545 | None:intergenic | 40.0% | |
| ATCCGTTTCTTTACATCCGT+TGG | - | chr5_2:26582536-26582555 | None:intergenic | 40.0% | |
| TTTCCAAAAATTCCCGCTCA+AGG | - | chr5_2:26582568-26582587 | None:intergenic | 40.0% | |
| ! | GTAAGCTTGTTTGTTTGGGT+AGG | + | chr5_2:26582634-26582653 | Msa0765510:three_prime_UTR | 40.0% |
| GTAGAAATGAGTGTAGTTGG+AGG | - | chr5_2:26582811-26582830 | None:intergenic | 40.0% | |
| AGATGAGTAACCCAAGGAAG+AGG | + | chr5_2:26577840-26577859 | Msa0765510:exon | 45.0% | |
| CGCGAAAATTCCTCTTCCTT+GGG | - | chr5_2:26577853-26577872 | None:intergenic | 45.0% | |
| ACGCGAAAATTCCTCTTCCT+TGG | - | chr5_2:26577854-26577873 | None:intergenic | 45.0% | |
| ! | GAAGAGGAATTTTCGCGTTG+AGG | + | chr5_2:26577856-26577875 | Msa0765510:CDS | 45.0% |
| !!! | CGTTGAGGGTTTTAAGCATG+TGG | + | chr5_2:26577871-26577890 | Msa0765510:CDS | 45.0% |
| !! | ATGTGGTTGTAATGGATCCG+AGG | + | chr5_2:26577888-26577907 | Msa0765510:CDS | 45.0% |
| !! | GTTGTAATGGATCCGAGGTA+TGG | + | chr5_2:26577893-26577912 | Msa0765510:CDS | 45.0% |
| TGTGATACTATGTCGGTCCT+TGG | + | chr5_2:26578184-26578203 | Msa0765510:intron | 45.0% | |
| GTGATACTATGTCGGTCCTT+GGG | + | chr5_2:26578185-26578204 | Msa0765510:intron | 45.0% | |
| TCATAGTAGCTGATCCCGTT+TGG | - | chr5_2:26579008-26579027 | None:intergenic | 45.0% | |
| ! | CGTTCTTTGGGTTTACACGT+AGG | + | chr5_2:26579192-26579211 | Msa0765510:intron | 45.0% |
| ! | TAAGTCCCCGTTTTCTTGGT+TGG | + | chr5_2:26579410-26579429 | Msa0765510:intron | 45.0% |
| !! | CAATGATGGCTTGCTACAGA+AGG | - | chr5_2:26579443-26579462 | None:intergenic | 45.0% |
| TTGGAGATGAGAAGTCATGG+TGG | - | chr5_2:26580653-26580672 | None:intergenic | 45.0% | |
| CTCTTGGAGATGAGAAGTCA+TGG | - | chr5_2:26580656-26580675 | None:intergenic | 45.0% | |
| GACTTCTCATCTCCAAGAGA+TGG | + | chr5_2:26580657-26580676 | Msa0765510:CDS | 45.0% | |
| CAACAGATCTAGCCATCTCT+TGG | - | chr5_2:26580672-26580691 | None:intergenic | 45.0% | |
| AGATCTGTTGAAGCCACTCA+AGG | + | chr5_2:26580682-26580701 | Msa0765510:CDS | 45.0% | |
| CAGAAAGGAACTTCCTTGAG+TGG | - | chr5_2:26580698-26580717 | None:intergenic | 45.0% | |
| CACTCAAGGAAGTTCCTTTC+TGG | + | chr5_2:26580696-26580715 | Msa0765510:CDS | 45.0% | |
| ATGAACTTGGTCAGAACCTG+TGG | + | chr5_2:26580830-26580849 | Msa0765510:CDS | 45.0% | |
| TCAACAGTCGAGTCCTTATC+TGG | - | chr5_2:26580879-26580898 | None:intergenic | 45.0% | |
| TTAGTACACAGTGAGCGTAC+CGG | + | chr5_2:26580913-26580932 | Msa0765510:CDS | 45.0% | |
| ACCGGCGAAGTTGTTAATAG+AGG | + | chr5_2:26580931-26580950 | Msa0765510:CDS | 45.0% | |
| ! | TATTGAGTGCTGTGGTTCTG+GGG | + | chr5_2:26581074-26581093 | Msa0765510:CDS | 45.0% |
| TGATAGAGTGAGCCACTACT+TGG | + | chr5_2:26581137-26581156 | Msa0765510:CDS | 45.0% | |
| GATTACTACTCTGGTGGAGA+AGG | + | chr5_2:26581179-26581198 | Msa0765510:CDS | 45.0% | |
| ! | AACTTGTTCAGTCGTGTCAC+CGG | + | chr5_2:26581303-26581322 | Msa0765510:CDS | 45.0% |
| !! | ACGTATTTTCGAGAGACCAC+CGG | - | chr5_2:26581325-26581344 | None:intergenic | 45.0% |
| ACAGGATCCTTCAACCTTTC+AGG | - | chr5_2:26581399-26581418 | None:intergenic | 45.0% | |
| AGCCTCTGCACAAATTCAAC+AGG | - | chr5_2:26581417-26581436 | None:intergenic | 45.0% | |
| AGGTCTAAAGGGAGTTAGTG+AGG | + | chr5_2:26581596-26581615 | Msa0765510:CDS | 45.0% | |
| TGCAGAGATTACCCTTGACA+AGG | + | chr5_2:26581623-26581642 | Msa0765510:CDS | 45.0% | |
| GGTTCTATTCCGGTATTTGC+AGG | + | chr5_2:26581650-26581669 | Msa0765510:CDS | 45.0% | |
| ! | CAGTTTCTGATGATGCTGAG+AGG | + | chr5_2:26581736-26581755 | Msa0765510:CDS | 45.0% |
| AGAACCTGCACAGTTAGTGT+AGG | - | chr5_2:26581897-26581916 | None:intergenic | 45.0% | |
| CATGTCACACTAGATTGAGC+TGG | - | chr5_2:26581936-26581955 | None:intergenic | 45.0% | |
| CACCTCTTCAAATCTGATGC+TGG | - | chr5_2:26582197-26582216 | None:intergenic | 45.0% | |
| GGGAAGAAATGTCCTTAGGA+AGG | + | chr5_2:26582241-26582260 | Msa0765510:CDS | 45.0% | |
| TCGCAAACATCTTTACCCAC+AGG | - | chr5_2:26582269-26582288 | None:intergenic | 45.0% | |
| TGTGGGTAAAGATGTTTGCG+AGG | + | chr5_2:26582268-26582287 | Msa0765510:CDS | 45.0% | |
| TGCACAAAAGGAATCGGAAC+TGG | + | chr5_2:26582358-26582377 | Msa0765510:CDS | 45.0% | |
| GCACAACAATCTTATGGCTG+AGG | + | chr5_2:26582475-26582494 | Msa0765510:CDS | 45.0% | |
| GCGATTCCTTCCAAATCCAA+CGG | + | chr5_2:26582517-26582536 | Msa0765510:CDS | 45.0% | |
| ! | TCTCCTTGAGCGGGAATTTT+TGG | + | chr5_2:26582562-26582581 | Msa0765510:CDS | 45.0% |
| GTTATGGCGTAAGCGCTATC+TGG | + | chr5_2:26578773-26578792 | Msa0765510:intron | 50.0% | |
| AGCAAGCCATCATTGCGCAA+AGG | + | chr5_2:26579448-26579467 | Msa0765510:intron | 50.0% | |
| CTACAGCCTTTGCGCAATGA+TGG | - | chr5_2:26579457-26579476 | None:intergenic | 50.0% | |
| CTCTCCCAGTTGCTTAAGGT+AGG | - | chr5_2:26579735-26579754 | None:intergenic | 50.0% | |
| !! | AAGTGCTGATAGCAGCGCTA+TGG | + | chr5_2:26580081-26580100 | Msa0765510:intron | 50.0% |
| GATGGTAGATGCACAAGCTG+TGG | + | chr5_2:26580348-26580367 | Msa0765510:intron | 50.0% | |
| GTAGATGCACAAGCTGTGGT+TGG | + | chr5_2:26580352-26580371 | Msa0765510:intron | 50.0% | |
| TTTGGCGAGAGGCTATACTC+TGG | + | chr5_2:26580619-26580638 | Msa0765510:CDS | 50.0% | |
| TTGGCGAGAGGCTATACTCT+GGG | + | chr5_2:26580620-26580639 | Msa0765510:CDS | 50.0% | |
| TACTCTGGTGGAGAAGGAGA+TGG | + | chr5_2:26581185-26581204 | Msa0765510:CDS | 50.0% | |
| ACAAGCAGCACCTTGCAAAG+CGG | + | chr5_2:26581697-26581716 | Msa0765510:CDS | 50.0% | |
| ! | CAGACAAAAGCCGCTTTGCA+AGG | - | chr5_2:26581710-26581729 | None:intergenic | 50.0% |
| ! | CTTGCAAAGCGGCTTTTGTC+TGG | + | chr5_2:26581708-26581727 | Msa0765510:CDS | 50.0% |
| AATGCCAACCACCCTGAGTT+AGG | + | chr5_2:26581864-26581883 | Msa0765510:CDS | 50.0% | |
| TAGGACCATCGCCTAACTCA+GGG | - | chr5_2:26581878-26581897 | None:intergenic | 50.0% | |
| TGGTCCTACACTAACTGTGC+AGG | + | chr5_2:26581890-26581909 | Msa0765510:CDS | 50.0% | |
| ! | ACTGTGCAGGTTCTGACAAC+AGG | + | chr5_2:26581903-26581922 | Msa0765510:CDS | 50.0% |
| ! | CTGTGCAGGTTCTGACAACA+GGG | + | chr5_2:26581904-26581923 | Msa0765510:CDS | 50.0% |
| ! | AGGTTCTGACAACAGGGTCT+TGG | + | chr5_2:26581910-26581929 | Msa0765510:CDS | 50.0% |
| ! | GTGCTGACATTTCTGTCGGA+AGG | - | chr5_2:26581962-26581981 | None:intergenic | 50.0% |
| !! | GAAGAGGTGCCTGCAATCAT+TGG | + | chr5_2:26582208-26582227 | Msa0765510:CDS | 50.0% |
| !! | GTGCCTGCAATCATTGGCTT+TGG | + | chr5_2:26582214-26582233 | Msa0765510:CDS | 50.0% |
| GGAATCGGAACTGGAGAAAC+TGG | + | chr5_2:26582367-26582386 | Msa0765510:CDS | 50.0% | |
| ! | GTTGTGCTCAAGTTGCTTCC+TGG | - | chr5_2:26582462-26582481 | None:intergenic | 50.0% |
| GGATTGAGTCTCTCCTTGAG+CGG | + | chr5_2:26582552-26582571 | Msa0765510:CDS | 50.0% | |
| GATTGAGTCTCTCCTTGAGC+GGG | + | chr5_2:26582553-26582572 | Msa0765510:CDS | 50.0% | |
| GGCTGAGATGCGTCTGAATG+AGG | + | chr5_2:26581110-26581129 | Msa0765510:CDS | 55.0% | |
| CAGTTCCAGGGTCCAAGTAG+TGG | - | chr5_2:26581152-26581171 | None:intergenic | 55.0% | |
| TTGTTCAGTCGTGTCACCGG+TGG | + | chr5_2:26581306-26581325 | Msa0765510:CDS | 55.0% | |
| ATCGCCTAACTCAGGGTGGT+TGG | - | chr5_2:26581871-26581890 | None:intergenic | 55.0% | |
| AACCACCCTGAGTTAGGCGA+TGG | + | chr5_2:26581870-26581889 | Msa0765510:CDS | 55.0% | |
| GTAGGACCATCGCCTAACTC+AGG | - | chr5_2:26581879-26581898 | None:intergenic | 55.0% | |
| ACCTCAGCACCCATAATGGC+AGG | + | chr5_2:26582006-26582025 | Msa0765510:CDS | 55.0% | |
| ! | TCCTGCCATTATGGGTGCTG+AGG | - | chr5_2:26582010-26582029 | None:intergenic | 55.0% |
| TGTCCTTAGGAAGGAGCCTG+TGG | + | chr5_2:26582250-26582269 | Msa0765510:CDS | 55.0% | |
| GTCCTTAGGAAGGAGCCTGT+GGG | + | chr5_2:26582251-26582270 | Msa0765510:CDS | 55.0% | |
| TACCCACAGGCTCCTTCCTA+AGG | - | chr5_2:26582256-26582275 | None:intergenic | 55.0% | |
| CGAGAGGCTATACTCTGGGC+TGG | + | chr5_2:26580624-26580643 | Msa0765510:CDS | 60.0% | |
| GTGAGCCACTACTTGGACCC+TGG | + | chr5_2:26581144-26581163 | Msa0765510:CDS | 60.0% | |
| GACCATCGCCTAACTCAGGG+TGG | - | chr5_2:26581875-26581894 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 26577620 | 26582877 | 26577620 | ID=Msa0765510;Name=Msa0765510 |
| chr5_2 | mRNA | 26577620 | 26582877 | 26577620 | ID=Msa0765510-mRNA-1;Parent=Msa0765510;Name=Msa0765510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=102|1|1|1|0.5|0.33|3|249|732 |
| chr5_2 | exon | 26577620 | 26577690 | 26577620 | ID=Msa0765510-mRNA-1:exon:10489;Parent=Msa0765510-mRNA-1 |
| chr5_2 | exon | 26577811 | 26578002 | 26577811 | ID=Msa0765510-mRNA-1:exon:10490;Parent=Msa0765510-mRNA-1 |
| chr5_2 | exon | 26580591 | 26582877 | 26580591 | ID=Msa0765510-mRNA-1:exon:10491;Parent=Msa0765510-mRNA-1 |
| chr5_2 | five_prime_UTR | 26577620 | 26577690 | 26577620 | ID=Msa0765510-mRNA-1:five_prime_utr;Parent=Msa0765510-mRNA-1 |
| chr5_2 | five_prime_UTR | 26577811 | 26577841 | 26577811 | ID=Msa0765510-mRNA-1:five_prime_utr;Parent=Msa0765510-mRNA-1 |
| chr5_2 | CDS | 26577842 | 26578002 | 26577842 | ID=Msa0765510-mRNA-1:cds;Parent=Msa0765510-mRNA-1 |
| chr5_2 | CDS | 26580591 | 26582628 | 26580591 | ID=Msa0765510-mRNA-1:cds;Parent=Msa0765510-mRNA-1 |
| chr5_2 | three_prime_UTR | 26582629 | 26582877 | 26582629 | ID=Msa0765510-mRNA-1:three_prime_utr;Parent=Msa0765510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
