Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481810 | ACJ83288.1 | 100.000 | 119 | 0 | 0 | 4 | 122 | 8 | 126 | 4.48e-80 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481810 | sp|Q9AST6|VSP55_ARATH | 51.667 | 120 | 55 | 1 | 1 | 117 | 14 | 133 | 1.65e-37 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481810 | B7FF98 | 100.000 | 119 | 0 | 0 | 4 | 122 | 8 | 126 | 2.14e-80 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0481810 | 0.803815 | 2.911089e-49 | -8.615850e-47 |
| Msa0008090 | Msa0481810 | 0.823774 | 1.155537e-53 | -8.615850e-47 |
| Msa0010490 | Msa0481810 | 0.829455 | 5.099772e-55 | -8.615850e-47 |
| Msa0010500 | Msa0481810 | 0.831409 | 1.697179e-55 | -8.615850e-47 |
| Msa0011960 | Msa0481810 | 0.822545 | 2.237044e-53 | -8.615850e-47 |
| Msa0020390 | Msa0481810 | 0.842515 | 2.467612e-58 | -8.615850e-47 |
| Msa0029260 | Msa0481810 | 0.863739 | 2.007135e-64 | -8.615850e-47 |
| Msa0030300 | Msa0481810 | 0.814619 | 1.404711e-51 | -8.615850e-47 |
| Msa0032260 | Msa0481810 | 0.801579 | 8.423764e-49 | -8.615850e-47 |
| Msa0032580 | Msa0481810 | 0.809184 | 2.145064e-50 | -8.615850e-47 |
| Msa0033880 | Msa0481810 | 0.827169 | 1.815248e-54 | -8.615850e-47 |
| Msa0037840 | Msa0481810 | 0.847497 | 1.113976e-59 | -8.615850e-47 |
| Msa0038870 | Msa0481810 | 0.826715 | 2.329840e-54 | -8.615850e-47 |
| Msa0043980 | Msa0481810 | 0.814304 | 1.649019e-51 | -8.615850e-47 |
| Msa0048150 | Msa0481810 | 0.803511 | 3.366835e-49 | -8.615850e-47 |
| Msa0055100 | Msa0481810 | 0.821270 | 4.413417e-53 | -8.615850e-47 |
| Msa0057140 | Msa0481810 | 0.833653 | 4.711895e-56 | -8.615850e-47 |
| Msa0061970 | Msa0481810 | 0.804862 | 1.761754e-49 | -8.615850e-47 |
| Msa0065950 | Msa0481810 | 0.809500 | 1.835440e-50 | -8.615850e-47 |
| Msa0068020 | Msa0481810 | 0.854490 | 1.189054e-61 | -8.615850e-47 |
| Msa0076000 | Msa0481810 | 0.805680 | 1.187659e-49 | -8.615850e-47 |
| Msa0077010 | Msa0481810 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0077900 | Msa0481810 | 0.803340 | 3.653562e-49 | -8.615850e-47 |
| Msa0084780 | Msa0481810 | 0.808062 | 3.724114e-50 | -8.615850e-47 |
| Msa0084940 | Msa0481810 | 0.805201 | 1.496720e-49 | -8.615850e-47 |
| Msa0086420 | Msa0481810 | 0.804772 | 1.840299e-49 | -8.615850e-47 |
| Msa0090520 | Msa0481810 | 0.836714 | 7.960413e-57 | -8.615850e-47 |
| Msa0090550 | Msa0481810 | 0.824106 | 9.662731e-54 | -8.615850e-47 |
| Msa0091610 | Msa0481810 | 0.833499 | 5.150738e-56 | -8.615850e-47 |
| Msa0093010 | Msa0481810 | 0.819185 | 1.326375e-52 | -8.615850e-47 |
| Msa0101180 | Msa0481810 | 0.811846 | 5.707490e-51 | -8.615850e-47 |
| Msa0105620 | Msa0481810 | 0.803634 | 3.175012e-49 | -8.615850e-47 |
| Msa0113240 | Msa0481810 | 0.806165 | 9.392911e-50 | -8.615850e-47 |
| Msa0115370 | Msa0481810 | 0.829755 | 4.309284e-55 | -8.615850e-47 |
| Msa0115390 | Msa0481810 | 0.824267 | 8.855902e-54 | -8.615850e-47 |
| Msa0115990 | Msa0481810 | 0.817909 | 2.582091e-52 | -8.615850e-47 |
| Msa0118540 | Msa0481810 | 0.821860 | 3.225442e-53 | -8.615850e-47 |
| Msa0121820 | Msa0481810 | 0.833424 | 5.375343e-56 | -8.615850e-47 |
| Msa0126840 | Msa0481810 | 0.825805 | 3.837604e-54 | -8.615850e-47 |
| Msa0126880 | Msa0481810 | 0.812189 | 4.806006e-51 | -8.615850e-47 |
| Msa0127040 | Msa0481810 | 0.815949 | 7.111515e-52 | -8.615850e-47 |
| Msa0127850 | Msa0481810 | 0.819194 | 1.320260e-52 | -8.615850e-47 |
| Msa0137820 | Msa0481810 | 0.812665 | 3.782449e-51 | -8.615850e-47 |
| Msa0137840 | Msa0481810 | 0.804654 | 1.946891e-49 | -8.615850e-47 |
| Msa0137990 | Msa0481810 | 0.835990 | 1.216523e-56 | -8.615850e-47 |
| Msa0138020 | Msa0481810 | 0.808513 | 2.984384e-50 | -8.615850e-47 |
| Msa0140110 | Msa0481810 | 0.848831 | 4.769267e-60 | -8.615850e-47 |
| Msa0140650 | Msa0481810 | 0.809456 | 1.875146e-50 | -8.615850e-47 |
| Msa0159420 | Msa0481810 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
| Msa0166750 | Msa0481810 | 0.819642 | 1.043375e-52 | -8.615850e-47 |
| Msa0167980 | Msa0481810 | 0.851490 | 8.580015e-61 | -8.615850e-47 |
| Msa0169300 | Msa0481810 | 0.861122 | 1.280405e-63 | -8.615850e-47 |
| Msa0172970 | Msa0481810 | 0.805434 | 1.337271e-49 | -8.615850e-47 |
| Msa0174000 | Msa0481810 | 0.821024 | 5.031080e-53 | -8.615850e-47 |
| Msa0174770 | Msa0481810 | 0.800547 | 1.369119e-48 | -8.615850e-47 |
| Msa0175200 | Msa0481810 | 0.815622 | 8.413378e-52 | -8.615850e-47 |
| Msa0178990 | Msa0481810 | 0.801102 | 1.055124e-48 | -8.615850e-47 |
| Msa0180120 | Msa0481810 | 0.812355 | 4.420757e-51 | -8.615850e-47 |
| Msa0183460 | Msa0481810 | 0.834573 | 2.772331e-56 | -8.615850e-47 |
| Msa0183850 | Msa0481810 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
| Msa0183870 | Msa0481810 | 0.826328 | 2.880779e-54 | -8.615850e-47 |
| Msa0183900 | Msa0481810 | 0.842701 | 2.201637e-58 | -8.615850e-47 |
| Msa0189520 | Msa0481810 | 0.835113 | 2.027552e-56 | -8.615850e-47 |
| Msa0190590 | Msa0481810 | 0.803705 | 3.068930e-49 | -8.615850e-47 |
| Msa0191050 | Msa0481810 | 0.839150 | 1.882365e-57 | -8.615850e-47 |
| Msa0191070 | Msa0481810 | 0.813260 | 2.800285e-51 | -8.615850e-47 |
| Msa0194480 | Msa0481810 | 0.845248 | 4.571609e-59 | -8.615850e-47 |
| Msa0199690 | Msa0481810 | 0.851914 | 6.506043e-61 | -8.615850e-47 |
| Msa0209080 | Msa0481810 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
| Msa0209500 | Msa0481810 | 0.804331 | 2.274211e-49 | -8.615850e-47 |
| Msa0217680 | Msa0481810 | 0.842884 | 1.968551e-58 | -8.615850e-47 |
| Msa0220390 | Msa0481810 | 0.809462 | 1.870043e-50 | -8.615850e-47 |
| Msa0231790 | Msa0481810 | 0.825350 | 4.916861e-54 | -8.615850e-47 |
| Msa0233350 | Msa0481810 | 0.855453 | 6.243908e-62 | -8.615850e-47 |
| Msa0233370 | Msa0481810 | 0.834875 | 2.327041e-56 | -8.615850e-47 |
| Msa0236270 | Msa0481810 | 0.837126 | 6.247922e-57 | -8.615850e-47 |
| Msa0366890 | Msa0481810 | 0.806007 | 1.013750e-49 | -8.615850e-47 |
| Msa0369050 | Msa0481810 | 0.806144 | 9.485115e-50 | -8.615850e-47 |
| Msa0376300 | Msa0481810 | 0.804584 | 2.013994e-49 | -8.615850e-47 |
| Msa0376690 | Msa0481810 | 0.860773 | 1.634486e-63 | -8.615850e-47 |
| Msa0376910 | Msa0481810 | 0.811254 | 7.675007e-51 | -8.615850e-47 |
| Msa0380300 | Msa0481810 | 0.809707 | 1.656134e-50 | -8.615850e-47 |
| Msa0383800 | Msa0481810 | 0.812229 | 4.709580e-51 | -8.615850e-47 |
| Msa0384880 | Msa0481810 | 0.830103 | 3.545550e-55 | -8.615850e-47 |
| Msa0385490 | Msa0481810 | 0.854913 | 8.965662e-62 | -8.615850e-47 |
| Msa0385500 | Msa0481810 | 0.814127 | 1.804859e-51 | -8.615850e-47 |
| Msa0388700 | Msa0481810 | 0.814961 | 1.179872e-51 | -8.615850e-47 |
| Msa0389510 | Msa0481810 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0392270 | Msa0481810 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
| Msa0392940 | Msa0481810 | 0.806551 | 7.785789e-50 | -8.615850e-47 |
| Msa0412840 | Msa0481810 | 0.800011 | 1.760516e-48 | -8.615850e-47 |
| Msa0414800 | Msa0481810 | 0.804202 | 2.418696e-49 | -8.615850e-47 |
| Msa0415430 | Msa0481810 | 0.850146 | 2.050377e-60 | -8.615850e-47 |
| Msa0419520 | Msa0481810 | 0.831578 | 1.541987e-55 | -8.615850e-47 |
| Msa0425220 | Msa0481810 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa0442200 | Msa0481810 | 0.817428 | 3.314968e-52 | -8.615850e-47 |
| Msa0442610 | Msa0481810 | 0.818952 | 1.498550e-52 | -8.615850e-47 |
| Msa0453690 | Msa0481810 | 0.802468 | 5.530714e-49 | -8.615850e-47 |
| Msa0458060 | Msa0481810 | 0.830335 | 3.112402e-55 | -8.615850e-47 |
| Msa0460100 | Msa0481810 | 0.803589 | 3.243611e-49 | -8.615850e-47 |
| Msa0465550 | Msa0481810 | 0.854873 | 9.210372e-62 | -8.615850e-47 |
| Msa0467780 | Msa0481810 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
| Msa0471590 | Msa0481810 | 0.859758 | 3.313448e-63 | -8.615850e-47 |
| Msa0477080 | Msa0481810 | 0.815749 | 7.881825e-52 | -8.615850e-47 |
| Msa0478020 | Msa0481810 | 0.814751 | 1.313260e-51 | -8.615850e-47 |
| Msa0479270 | Msa0481810 | 0.817697 | 2.882251e-52 | -8.615850e-47 |
| Msa0481030 | Msa0481810 | 0.814510 | 1.485376e-51 | -8.615850e-47 |
| Msa0481480 | Msa0481810 | 0.810583 | 1.072609e-50 | -8.615850e-47 |
| Msa0481810 | Msa0484740 | 0.831211 | 1.897876e-55 | -8.615850e-47 |
| Msa0481810 | Msa0485120 | 0.825263 | 5.157651e-54 | -8.615850e-47 |
| Msa0481810 | Msa0485850 | 0.856727 | 2.646206e-62 | -8.615850e-47 |
| Msa0481810 | Msa0489610 | 0.821093 | 4.849613e-53 | -8.615850e-47 |
| Msa0481810 | Msa0503200 | 0.803580 | 3.257297e-49 | -8.615850e-47 |
| Msa0481810 | Msa0508590 | 0.823546 | 1.306629e-53 | -8.615850e-47 |
| Msa0481810 | Msa0508630 | 0.808977 | 2.375673e-50 | -8.615850e-47 |
| Msa0481810 | Msa0511490 | 0.823497 | 1.341550e-53 | -8.615850e-47 |
| Msa0481810 | Msa0514180 | 0.816666 | 4.916739e-52 | -8.615850e-47 |
| Msa0481810 | Msa0534900 | 0.829109 | 6.185033e-55 | -8.615850e-47 |
| Msa0481810 | Msa0542290 | 0.807395 | 5.162684e-50 | -8.615850e-47 |
| Msa0481810 | Msa0544540 | 0.811871 | 5.635865e-51 | -8.615850e-47 |
| Msa0481810 | Msa0546570 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0481810 | Msa0547160 | 0.820082 | 8.278563e-53 | -8.615850e-47 |
| Msa0481810 | Msa0555450 | 0.846477 | 2.119088e-59 | -8.615850e-47 |
| Msa0481810 | Msa0556060 | 0.812600 | 3.906822e-51 | -8.615850e-47 |
| Msa0481810 | Msa0556790 | 0.833486 | 5.188142e-56 | -8.615850e-47 |
| Msa0481810 | Msa0580230 | 0.820855 | 5.501770e-53 | -8.615850e-47 |
| Msa0481810 | Msa0580280 | 0.808565 | 2.909582e-50 | -8.615850e-47 |
| Msa0481810 | Msa0581070 | 0.802373 | 5.786956e-49 | -8.615850e-47 |
| Msa0481810 | Msa0581110 | 0.823231 | 1.547888e-53 | -8.615850e-47 |
| Msa0481810 | Msa0588240 | 0.824948 | 6.118772e-54 | -8.615850e-47 |
| Msa0481810 | Msa0588260 | 0.834232 | 3.376942e-56 | -8.615850e-47 |
| Msa0481810 | Msa0589190 | 0.840930 | 6.461748e-58 | -8.615850e-47 |
| Msa0481810 | Msa0590650 | 0.833218 | 6.049235e-56 | -8.615850e-47 |
| Msa0481810 | Msa0594910 | 0.822869 | 1.880545e-53 | -8.615850e-47 |
| Msa0481810 | Msa0602370 | 0.806347 | 8.596680e-50 | -8.615850e-47 |
| Msa0481810 | Msa0603570 | 0.830704 | 2.528182e-55 | -8.615850e-47 |
| Msa0481810 | Msa0607690 | 0.838990 | 2.070823e-57 | -8.615850e-47 |
| Msa0481810 | Msa0608710 | 0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0481810 | Msa0609000 | 0.816621 | 5.033140e-52 | -8.615850e-47 |
| Msa0481810 | Msa0609410 | -0.805785 | 1.128566e-49 | -8.615850e-47 |
| Msa0481810 | Msa0610130 | 0.801086 | 1.063056e-48 | -8.615850e-47 |
| Msa0481810 | Msa0610390 | 0.839122 | 1.914330e-57 | -8.615850e-47 |
| Msa0481810 | Msa0620620 | 0.809011 | 2.336186e-50 | -8.615850e-47 |
| Msa0481810 | Msa0626940 | 0.820221 | 7.690206e-53 | -8.615850e-47 |
| Msa0481810 | Msa0628740 | 0.806701 | 7.239725e-50 | -8.615850e-47 |
| Msa0481810 | Msa0631350 | 0.847390 | 1.191939e-59 | -8.615850e-47 |
| Msa0481810 | Msa0642970 | 0.824524 | 7.705522e-54 | -8.615850e-47 |
| Msa0481810 | Msa0643320 | 0.804623 | 1.976570e-49 | -8.615850e-47 |
| Msa0481810 | Msa0647500 | 0.809916 | 1.493681e-50 | -8.615850e-47 |
| Msa0481810 | Msa0649350 | 0.801233 | 9.918671e-49 | -8.615850e-47 |
| Msa0481810 | Msa0650920 | 0.837874 | 4.017449e-57 | -8.615850e-47 |
| Msa0481810 | Msa0657120 | 0.802691 | 4.974042e-49 | -8.615850e-47 |
| Msa0481810 | Msa0661090 | 0.827067 | 1.919450e-54 | -8.615850e-47 |
| Msa0481810 | Msa0661300 | 0.813371 | 2.648137e-51 | -8.615850e-47 |
| Msa0481810 | Msa0662630 | 0.829623 | 4.641004e-55 | -8.615850e-47 |
| Msa0481810 | Msa0663900 | 0.807254 | 5.528934e-50 | -8.615850e-47 |
| Msa0481810 | Msa0665080 | 0.804507 | 2.089690e-49 | -8.615850e-47 |
| Msa0481810 | Msa0666140 | 0.806940 | 6.443841e-50 | -8.615850e-47 |
| Msa0481810 | Msa0666270 | 0.822321 | 2.521936e-53 | -8.615850e-47 |
| Msa0481810 | Msa0669720 | 0.823336 | 1.462886e-53 | -8.615850e-47 |
| Msa0481810 | Msa0669760 | 0.846229 | 2.476432e-59 | -8.615850e-47 |
| Msa0481810 | Msa0673470 | 0.830780 | 2.422268e-55 | -8.615850e-47 |
| Msa0481810 | Msa0682680 | 0.804954 | 1.685501e-49 | -8.615850e-47 |
| Msa0481810 | Msa0683140 | 0.804282 | 2.328419e-49 | -8.615850e-47 |
| Msa0481810 | Msa0683170 | 0.800173 | 1.631752e-48 | -8.615850e-47 |
| Msa0481810 | Msa0683600 | 0.803870 | 2.836128e-49 | -8.615850e-47 |
| Msa0481810 | Msa0687020 | 0.829025 | 6.484428e-55 | -8.615850e-47 |
| Msa0481810 | Msa0687630 | 0.808066 | 3.716783e-50 | -8.615850e-47 |
| Msa0481810 | Msa0689500 | 0.826053 | 3.350661e-54 | -8.615850e-47 |
| Msa0481810 | Msa0692750 | 0.822215 | 2.668612e-53 | -8.615850e-47 |
| Msa0481810 | Msa0692840 | 0.821485 | 3.938799e-53 | -8.615850e-47 |
| Msa0481810 | Msa0692940 | 0.861321 | 1.113619e-63 | -8.615850e-47 |
| Msa0481810 | Msa0694840 | 0.835381 | 1.734164e-56 | -8.615850e-47 |
| Msa0481810 | Msa0698540 | 0.823524 | 1.322682e-53 | -8.615850e-47 |
| Msa0481810 | Msa0701100 | 0.822704 | 2.053964e-53 | -8.615850e-47 |
| Msa0481810 | Msa0703910 | 0.807904 | 4.025423e-50 | -8.615850e-47 |
| Msa0481810 | Msa0705390 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0481810 | Msa0705600 | 0.801774 | 7.683608e-49 | -8.615850e-47 |
| Msa0481810 | Msa0706960 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0481810 | Msa0722020 | 0.840005 | 1.128002e-57 | -8.615850e-47 |
| Msa0481810 | Msa0726080 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0481810 | Msa0726830 | 0.826409 | 2.755811e-54 | -8.615850e-47 |
| Msa0481810 | Msa0726860 | 0.812969 | 3.243989e-51 | -8.615850e-47 |
| Msa0481810 | Msa0737600 | 0.843589 | 1.276653e-58 | -8.615850e-47 |
| Msa0481810 | Msa0743990 | 0.813161 | 2.944710e-51 | -8.615850e-47 |
| Msa0481810 | Msa0750430 | 0.820365 | 7.130258e-53 | -8.615850e-47 |
| Msa0481810 | Msa0763020 | 0.806142 | 9.495535e-50 | -8.615850e-47 |
| Msa0481810 | Msa0763070 | 0.820945 | 5.246479e-53 | -8.615850e-47 |
| Msa0481810 | Msa0765380 | 0.800892 | 1.164366e-48 | -8.615850e-47 |
| Msa0481810 | Msa0772480 | 0.820235 | 7.633443e-53 | -8.615850e-47 |
| Msa0481810 | Msa0774750 | 0.800850 | 1.187631e-48 | -8.615850e-47 |
| Msa0481810 | Msa0780880 | 0.811904 | 5.543144e-51 | -8.615850e-47 |
| Msa0481810 | Msa0792780 | 0.807794 | 4.247681e-50 | -8.615850e-47 |
| Msa0481810 | Msa0793390 | 0.835835 | 1.331712e-56 | -8.615850e-47 |
| Msa0481810 | Msa0794670 | 0.822303 | 2.546321e-53 | -8.615850e-47 |
| Msa0481810 | Msa0798440 | 0.821633 | 3.640239e-53 | -8.615850e-47 |
| Msa0481810 | Msa0800370 | 0.833119 | 6.402398e-56 | -8.615850e-47 |
| Msa0481810 | Msa0805500 | 0.840069 | 1.085321e-57 | -8.615850e-47 |
| Msa0481810 | Msa0806920 | 0.805629 | 1.217083e-49 | -8.615850e-47 |
| Msa0481810 | Msa0809770 | 0.817442 | 3.290163e-52 | -8.615850e-47 |
| Msa0481810 | Msa0818170 | 0.806477 | 8.072046e-50 | -8.615850e-47 |
| Msa0481810 | Msa0822310 | -0.822429 | 2.380022e-53 | -8.615850e-47 |
| Msa0481810 | Msa0823500 | 0.813340 | 2.690146e-51 | -8.615850e-47 |
| Msa0481810 | Msa0827280 | 0.841589 | 4.335047e-58 | -8.615850e-47 |
| Msa0481810 | Msa0830540 | 0.822988 | 1.763798e-53 | -8.615850e-47 |
| Msa0481810 | Msa0842830 | 0.823077 | 1.681463e-53 | -8.615850e-47 |
| Msa0481810 | Msa0846230 | 0.810071 | 1.382824e-50 | -8.615850e-47 |
| Msa0481810 | Msa0847080 | 0.830855 | 2.321616e-55 | -8.615850e-47 |
| Msa0481810 | Msa0856960 | 0.811726 | 6.060180e-51 | -8.615850e-47 |
| Msa0481810 | Msa0861470 | 0.820065 | 8.350316e-53 | -8.615850e-47 |
| Msa0481810 | Msa0861570 | 0.820947 | 5.240198e-53 | -8.615850e-47 |
| Msa0481810 | Msa0862500 | 0.813947 | 1.977764e-51 | -8.615850e-47 |
| Msa0481810 | Msa0864290 | 0.808296 | 3.321498e-50 | -8.615850e-47 |
| Msa0481810 | Msa0865570 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0481810 | Msa0869120 | 0.845163 | 4.820146e-59 | -8.615850e-47 |
| Msa0481810 | Msa0872440 | 0.823452 | 1.375060e-53 | -8.615850e-47 |
| Msa0481810 | Msa0879860 | 0.802921 | 4.458805e-49 | -8.615850e-47 |
| Msa0481810 | Msa0930140 | 0.831510 | 1.602629e-55 | -8.615850e-47 |
| Msa0481810 | Msa0933290 | 0.847131 | 1.404163e-59 | -8.615850e-47 |
| Msa0481810 | Msa0937330 | 0.808068 | 3.714025e-50 | -8.615850e-47 |
| Msa0481810 | Msa0942070 | 0.814773 | 1.298777e-51 | -8.615850e-47 |
| Msa0481810 | Msa0971020 | 0.842071 | 3.233507e-58 | -8.615850e-47 |
| Msa0481810 | Msa0974810 | 0.801082 | 1.065080e-48 | -8.615850e-47 |
| Msa0481810 | Msa0980020 | 0.801047 | 1.082370e-48 | -8.615850e-47 |
| Msa0481810 | Msa0994370 | 0.803667 | 3.124297e-49 | -8.615850e-47 |
| Msa0481810 | Msa1012830 | 0.816302 | 5.932348e-52 | -8.615850e-47 |
| Msa0481810 | Msa1023180 | 0.820952 | 5.226226e-53 | -8.615850e-47 |
| Msa0481810 | Msa1024750 | 0.826864 | 2.147120e-54 | -8.615850e-47 |
| Msa0481810 | Msa1025940 | 0.822619 | 2.150001e-53 | -8.615850e-47 |
| Msa0481810 | Msa1034150 | 0.810092 | 1.369069e-50 | -8.615850e-47 |
| Msa0481810 | Msa1037420 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0481810 | Msa1041850 | 0.831281 | 1.824899e-55 | -8.615850e-47 |
| Msa0481810 | Msa1043050 | 0.824878 | 6.359166e-54 | -8.615850e-47 |
| Msa0481810 | Msa1046020 | 0.858130 | 1.017676e-62 | -8.615850e-47 |
| Msa0481810 | Msa1046060 | 0.852388 | 4.770641e-61 | -8.615850e-47 |
| Msa0481810 | Msa1063510 | 0.810009 | 1.426518e-50 | -8.615850e-47 |
| Msa0481810 | Msa1064250 | 0.803789 | 2.947598e-49 | -8.615850e-47 |
| Msa0481810 | Msa1071320 | 0.820841 | 5.542287e-53 | -8.615850e-47 |
| Msa0481810 | Msa1077030 | 0.808776 | 2.622430e-50 | -8.615850e-47 |
| Msa0481810 | Msa1089320 | 0.852254 | 5.206918e-61 | -8.615850e-47 |
| Msa0481810 | Msa1089840 | 0.823522 | 1.323579e-53 | -8.615850e-47 |
| Msa0481810 | Msa1091100 | 0.870237 | 1.698428e-66 | -8.615850e-47 |
| Msa0481810 | Msa1091940 | 0.814357 | 1.605320e-51 | -8.615850e-47 |
| Msa0481810 | Msa1094430 | 0.813753 | 2.182012e-51 | -8.615850e-47 |
| Msa0481810 | Msa1120810 | 0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa0481810 | Msa1126830 | 0.825287 | 5.089845e-54 | -8.615850e-47 |
| Msa0481810 | Msa1126850 | 0.802296 | 6.000956e-49 | -8.615850e-47 |
| Msa0481810 | Msa1129730 | 0.801550 | 8.540880e-49 | -8.615850e-47 |
| Msa0481810 | Msa1133230 | 0.837107 | 6.317791e-57 | -8.615850e-47 |
| Msa0481810 | Msa1133250 | 0.824657 | 7.167421e-54 | -8.615850e-47 |
| Msa0481810 | Msa1134090 | 0.872213 | 3.779711e-67 | -8.615850e-47 |
| Msa0481810 | Msa1138520 | 0.804044 | 2.608698e-49 | -8.615850e-47 |
| Msa0481810 | Msa1138870 | 0.841153 | 5.648100e-58 | -8.615850e-47 |
| Msa0481810 | Msa1143840 | 0.800496 | 1.402690e-48 | -8.615850e-47 |
| Msa0481810 | Msa1144970 | 0.813071 | 3.080776e-51 | -8.615850e-47 |
| Msa0481810 | Msa1150710 | 0.836068 | 1.162120e-56 | -8.615850e-47 |
| Msa0481810 | Msa1152520 | 0.829169 | 5.983562e-55 | -8.615850e-47 |
| Msa0481810 | Msa1156870 | 0.804638 | 1.962269e-49 | -8.615850e-47 |
| Msa0481810 | Msa1160590 | 0.806375 | 8.482851e-50 | -8.615850e-47 |
| Msa0481810 | Msa1165780 | 0.836352 | 9.838475e-57 | -8.615850e-47 |
| Msa0481810 | Msa1166870 | 0.807504 | 4.893380e-50 | -8.615850e-47 |
| Msa0481810 | Msa1179980 | 0.803830 | 2.890112e-49 | -8.615850e-47 |
| Msa0481810 | Msa1190930 | 0.814604 | 1.415844e-51 | -8.615850e-47 |
| Msa0481810 | Msa1201560 | 0.801830 | 7.483047e-49 | -8.615850e-47 |
| Msa0481810 | Msa1203880 | 0.805961 | 1.036887e-49 | -8.615850e-47 |
| Msa0481810 | Msa1204530 | 0.808757 | 2.648082e-50 | -8.615850e-47 |
| Msa0481810 | Msa1204630 | 0.810898 | 9.169379e-51 | -8.615850e-47 |
| Msa0481810 | Msa1206310 | 0.813909 | 2.016303e-51 | -8.615850e-47 |
| Msa0481810 | Msa1206360 | 0.812984 | 3.219912e-51 | -8.615850e-47 |
| Msa0481810 | Msa1206650 | 0.804319 | 2.286609e-49 | -8.615850e-47 |
| Msa0481810 | Msa1207310 | 0.808260 | 3.379490e-50 | -8.615850e-47 |
| Msa0481810 | Msa1208380 | 0.818311 | 2.094657e-52 | -8.615850e-47 |
| Msa0481810 | Msa1218600 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0481810 | Msa1224810 | 0.802052 | 6.734937e-49 | -8.615850e-47 |
| Msa0481810 | Msa1237940 | 0.822365 | 2.462711e-53 | -8.615850e-47 |
| Msa0481810 | Msa1253800 | 0.808821 | 2.565656e-50 | -8.615850e-47 |
| Msa0481810 | Msa1253810 | 0.812297 | 4.551055e-51 | -8.615850e-47 |
| Msa0481810 | Msa1254730 | 0.805285 | 1.437116e-49 | -8.615850e-47 |
| Msa0481810 | Msa1267520 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
| Msa0481810 | Msa1269300 | 0.826359 | 2.833425e-54 | -8.615850e-47 |
| Msa0481810 | Msa1270690 | 0.802619 | 5.147788e-49 | -8.615850e-47 |
| Msa0481810 | Msa1278900 | 0.807144 | 5.833250e-50 | -8.615850e-47 |
| Msa0481810 | Msa1296830 | 0.850887 | 1.269979e-60 | -8.615850e-47 |
| Msa0481810 | Msa1304820 | 0.852704 | 3.876469e-61 | -8.615850e-47 |
| Msa0481810 | Msa1305710 | 0.818883 | 1.553189e-52 | -8.615850e-47 |
| Msa0481810 | Msa1307180 | 0.833418 | 5.394816e-56 | -8.615850e-47 |
| Msa0481810 | Msa1316360 | 0.838501 | 2.769898e-57 | -8.615850e-47 |
| Msa0481810 | Msa1331350 | 0.820172 | 7.892059e-53 | -8.615850e-47 |
| Msa0481810 | Msa1336560 | 0.834656 | 2.642099e-56 | -8.615850e-47 |
| Msa0481810 | Msa1340020 | 0.801610 | 8.300552e-49 | -8.615850e-47 |
| Msa0481810 | Msa1345040 | 0.817419 | 3.330157e-52 | -8.615850e-47 |
| Msa0481810 | Msa1348560 | 0.810220 | 1.284344e-50 | -8.615850e-47 |
| Msa0481810 | Msa1348850 | 0.825289 | 5.084986e-54 | -8.615850e-47 |
| Msa0481810 | Msa1351540 | 0.814763 | 1.305362e-51 | -8.615850e-47 |
| Msa0481810 | Msa1362420 | 0.832121 | 1.132673e-55 | -8.615850e-47 |
| Msa0481810 | Msa1364210 | 0.852237 | 5.267412e-61 | -8.615850e-47 |
| Msa0481810 | Msa1364910 | 0.815945 | 7.125337e-52 | -8.615850e-47 |
| Msa0481810 | Msa1376650 | 0.814347 | 1.613476e-51 | -8.615850e-47 |
| Msa0481810 | Msa1382020 | 0.816558 | 5.197659e-52 | -8.615850e-47 |
| Msa0481810 | Msa1385770 | 0.804557 | 2.039742e-49 | -8.615850e-47 |
| Msa0481810 | Msa1393740 | 0.836156 | 1.103735e-56 | -8.615850e-47 |
| Msa0481810 | Msa1397120 | 0.803382 | 3.580501e-49 | -8.615850e-47 |
| Msa0481810 | Msa1397940 | 0.802416 | 5.668688e-49 | -8.615850e-47 |
| Msa0481810 | Msa1403340 | 0.809264 | 2.061918e-50 | -8.615850e-47 |
| Msa0481810 | Msa1409240 | 0.802403 | 5.705264e-49 | -8.615850e-47 |
| Msa0481810 | Msa1419640 | 0.805129 | 1.549212e-49 | -8.615850e-47 |
| Msa0481810 | Msa1419870 | 0.819651 | 1.038674e-52 | -8.615850e-47 |
| Msa0481810 | Msa1420990 | 0.855922 | 4.557104e-62 | -8.615850e-47 |
| Msa0481810 | Msa1423910 | 0.826346 | 2.853062e-54 | -8.615850e-47 |
| Msa0481810 | Msa1433390 | 0.802921 | 4.458805e-49 | -8.615850e-47 |
| Msa0481810 | Msa1435750 | 0.816347 | 5.794725e-52 | -8.615850e-47 |
| Msa0481810 | Msa1436520 | 0.832776 | 7.795115e-56 | -8.615850e-47 |
| Msa0481810 | Msa1438840 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0481810 | Msa1444740 | 0.803345 | 3.644795e-49 | -8.615850e-47 |
| Msa0481810 | Msa1447890 | 0.838744 | 2.397075e-57 | -8.615850e-47 |
| Msa0481810 | Msa1448630 | 0.820563 | 6.421748e-53 | -8.615850e-47 |
| Msa0481810 | Msa1451550 | 0.806732 | 7.129700e-50 | -8.615850e-47 |
| Msa0481810 | Msa1452470 | 0.807168 | 5.765582e-50 | -8.615850e-47 |
| Msa0481810 | Msa1454680 | 0.808887 | 2.482683e-50 | -8.615850e-47 |
| Msa0481810 | Msa1461280 | 0.842448 | 2.570035e-58 | -8.615850e-47 |
| Msa0481810 | Msa1462290 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
| Msa0257490 | Msa0481810 | 0.810338 | 1.211156e-50 | -8.615850e-47 |
| Msa0257500 | Msa0481810 | 0.838844 | 2.259192e-57 | -8.615850e-47 |
| Msa0261720 | Msa0481810 | 0.806403 | 8.368366e-50 | -8.615850e-47 |
| Msa0265600 | Msa0481810 | 0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa0267970 | Msa0481810 | 0.813685 | 2.258854e-51 | -8.615850e-47 |
| Msa0269470 | Msa0481810 | 0.827468 | 1.538524e-54 | -8.615850e-47 |
| Msa0271360 | Msa0481810 | 0.828400 | 9.183286e-55 | -8.615850e-47 |
| Msa0275360 | Msa0481810 | 0.825371 | 4.862078e-54 | -8.615850e-47 |
| Msa0280430 | Msa0481810 | 0.843378 | 1.454095e-58 | -8.615850e-47 |
| Msa0291520 | Msa0481810 | 0.818025 | 2.431033e-52 | -8.615850e-47 |
| Msa0296920 | Msa0481810 | 0.852832 | 3.562421e-61 | -8.615850e-47 |
| Msa0298700 | Msa0481810 | 0.810837 | 9.449537e-51 | -8.615850e-47 |
| Msa0304590 | Msa0481810 | 0.822998 | 1.754284e-53 | -8.615850e-47 |
| Msa0304660 | Msa0481810 | 0.819865 | 9.279232e-53 | -8.615850e-47 |
| Msa0311720 | Msa0481810 | 0.804371 | 2.230664e-49 | -8.615850e-47 |
| Msa0315850 | Msa0481810 | 0.812070 | 5.100391e-51 | -8.615850e-47 |
| Msa0320430 | Msa0481810 | 0.807566 | 4.747444e-50 | -8.615850e-47 |
| Msa0323560 | Msa0481810 | 0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa0331700 | Msa0481810 | 0.815638 | 8.343023e-52 | -8.615850e-47 |
| Msa0359560 | Msa0481810 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481810 | MtrunA17_Chr7g0266711 | 100.000 | 113 | 0 | 0 | 10 | 122 | 1 | 113 | 6.24e-80 | 230 |
| Msa0481810 | MtrunA17_Chr5g0400201 | 52.586 | 116 | 55 | 0 | 7 | 122 | 20 | 135 | 2.64e-37 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481810 | AT3G11530.1 | 90.265 | 113 | 11 | 0 | 10 | 122 | 1 | 113 | 2.30e-73 | 214 |
| Msa0481810 | AT3G11530.2 | 90.265 | 113 | 11 | 0 | 10 | 122 | 1 | 113 | 2.30e-73 | 214 |
| Msa0481810 | AT3G11530.3 | 89.130 | 92 | 10 | 0 | 31 | 122 | 1 | 92 | 1.13e-57 | 173 |
| Msa0481810 | AT1G32410.3 | 51.667 | 120 | 55 | 1 | 1 | 117 | 14 | 133 | 1.68e-38 | 127 |
| Msa0481810 | AT1G32410.4 | 51.667 | 120 | 55 | 1 | 1 | 117 | 14 | 133 | 1.68e-38 | 127 |
| Msa0481810 | AT1G32410.1 | 51.667 | 120 | 55 | 1 | 1 | 117 | 14 | 133 | 1.68e-38 | 127 |
| Msa0481810 | AT1G32410.2 | 51.667 | 120 | 55 | 1 | 1 | 117 | 14 | 133 | 1.68e-38 | 127 |
| Msa0481810 | AT1G32410.5 | 51.667 | 120 | 55 | 1 | 1 | 117 | 14 | 133 | 1.68e-38 | 127 |
Find 55 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATATTATCTTGCAAAATA+AGG | 0.203367 | 3_3:+88178574 | Msa0481810:five_prime_UTR |
| CCTATGCCTTGCTTATTCTT+TGG | 0.223818 | 3_3:+88180668 | Msa0481810:CDS |
| TTTGGTTTACCTTTGTCCTT+AGG | 0.266445 | 3_3:+88181277 | Msa0481810:three_prime_UTR |
| TAGATAATATAAATTGTTCT+AGG | 0.273443 | 3_3:-88177850 | None:intergenic |
| TTTGGGATGTGTAGCCTTGC+TGG | 0.294386 | 3_3:+88178621 | Msa0481810:exon |
| ATTATGTCCTGCTAGTCATT+AGG | 0.301018 | 3_3:+88181135 | Msa0481810:three_prime_UTR |
| TTATGTCCTGCTAGTCATTA+GGG | 0.318730 | 3_3:+88181136 | Msa0481810:three_prime_UTR |
| TTTGACTGGAGCATCATCTA+TGG | 0.319238 | 3_3:+88180955 | Msa0481810:CDS |
| AATTGGTGGCCCATGTTATC+AGG | 0.338531 | 3_3:+88180546 | Msa0481810:CDS |
| TGTGCATGCCTAAGGATTAT+AGG | 0.350426 | 3_3:-88180992 | None:intergenic |
| TTGGTTTACCTTTGTCCTTA+GGG | 0.375538 | 3_3:+88181278 | Msa0481810:three_prime_UTR |
| CCTTGCTTATTCTTTGGAGG+TGG | 0.384197 | 3_3:+88180674 | Msa0481810:CDS |
| CTAGCAGGACATAATAACTA+TGG | 0.395876 | 3_3:-88181127 | None:intergenic |
| GCAACTTATATGACTTCCTT+TGG | 0.395897 | 3_3:+88181259 | Msa0481810:three_prime_UTR |
| ATGCCTTGCTTATTCTTTGG+AGG | 0.407131 | 3_3:+88180671 | Msa0481810:CDS |
| AAGCGAGCCTTGACGATGAT+TGG | 0.449028 | 3_3:+88181092 | Msa0481810:CDS |
| CATGTGCAATATACAACAAT+TGG | 0.452781 | 3_3:+88180529 | Msa0481810:CDS |
| TTGGGATGTGTAGCCTTGCT+GGG | 0.459320 | 3_3:+88178622 | Msa0481810:exon |
| CTTGCTTATTCTTTGGAGGT+GGG | 0.459789 | 3_3:+88180675 | Msa0481810:CDS |
| GATGTGTAGCCTTGCTGGGT+TGG | 0.460505 | 3_3:+88178626 | Msa0481810:exon |
| TCAGTTCCGTTACTTGCAAT+CGG | 0.475267 | 3_3:+88177980 | Msa0481810:five_prime_UTR |
| TTGACTGGAGCATCATCTAT+GGG | 0.478701 | 3_3:+88180956 | Msa0481810:CDS |
| CATCGTCAAGGCTCGCTTGG+TGG | 0.484940 | 3_3:-88181087 | None:intergenic |
| CAATCATGTGTGCATGCCTA+AGG | 0.493849 | 3_3:-88181000 | None:intergenic |
| GACTAACTCACCTGATAACA+TGG | 0.502341 | 3_3:-88180556 | None:intergenic |
| TTCTAATCAGTCGTGATGGT+GGG | 0.510978 | 3_3:+88180708 | Msa0481810:CDS |
| TAGCCATTCCTATAATCCTT+AGG | 0.520013 | 3_3:+88180984 | Msa0481810:CDS |
| AACAATCCCTAATGACTAGC+AGG | 0.522608 | 3_3:-88181142 | None:intergenic |
| AATCATCGTCAAGGCTCGCT+TGG | 0.537581 | 3_3:-88181090 | None:intergenic |
| TCTAATCAGTCGTGATGGTG+GGG | 0.537910 | 3_3:+88180709 | Msa0481810:CDS |
| CTAATCAGTCGTGATGGTGG+GGG | 0.543965 | 3_3:+88180710 | Msa0481810:CDS |
| CATGCACACATGATTGAGAC+TGG | 0.548752 | 3_3:+88181007 | Msa0481810:CDS |
| GGTATTATGCTGCAGTTGGA+TGG | 0.562630 | 3_3:+88180919 | Msa0481810:intron |
| CCAAAGAATAAGCAAGGCAT+AGG | 0.567783 | 3_3:-88180668 | None:intergenic |
| CCGTGTACTGTCATCGCCAT+GGG | 0.568066 | 3_3:-88178024 | None:intergenic |
| ATGCCTAAGGATTATAGGAA+TGG | 0.569900 | 3_3:-88180987 | None:intergenic |
| TTTCTAATCAGTCGTGATGG+TGG | 0.574398 | 3_3:+88180707 | Msa0481810:CDS |
| GTGCAATATACAACAATTGG+TGG | 0.577002 | 3_3:+88180532 | Msa0481810:CDS |
| ACCGTGTACTGTCATCGCCA+TGG | 0.577319 | 3_3:-88178025 | None:intergenic |
| TGCAGCTCTGATGTATGTGC+TGG | 0.580123 | 3_3:+88180643 | Msa0481810:intron |
| GTTATTACCAATCATCGTCA+AGG | 0.586502 | 3_3:-88181099 | None:intergenic |
| CGATTTCCGATTGCAAGTAA+CGG | 0.589496 | 3_3:-88177986 | None:intergenic |
| ACATAAAAGCCAACCCAGCA+AGG | 0.597005 | 3_3:-88178635 | None:intergenic |
| GAAGAACGATACAGTTTCCA+TGG | 0.597270 | 3_3:-88181204 | None:intergenic |
| CAATTTCTAATCAGTCGTGA+TGG | 0.601388 | 3_3:+88180704 | Msa0481810:CDS |
| CTTACACACCCTAAGGACAA+AGG | 0.601652 | 3_3:-88181286 | None:intergenic |
| ACGACTGATTAGAAATTGAG+TGG | 0.610369 | 3_3:-88180699 | None:intergenic |
| GAAGAGAGAGATAGCTCCCA+TGG | 0.616027 | 3_3:+88178008 | Msa0481810:five_prime_UTR |
| CCACCTCCAAAGAATAAGCA+AGG | 0.628782 | 3_3:-88180674 | None:intergenic |
| GCTGAGACTTAATACAGCCA+TGG | 0.637664 | 3_3:+88181187 | Msa0481810:three_prime_UTR |
| TAATCAGTCGTGATGGTGGG+GGG | 0.640713 | 3_3:+88180711 | Msa0481810:CDS |
| CCCATGGCGATGACAGTACA+CGG | 0.650194 | 3_3:+88178024 | Msa0481810:five_prime_UTR |
| TGACTGGAGCATCATCTATG+GGG | 0.657349 | 3_3:+88180957 | Msa0481810:CDS |
| TAAGGACAAAGGTAAACCAA+AGG | 0.667257 | 3_3:-88181275 | None:intergenic |
| ACTAACTCACCTGATAACAT+GGG | 0.684284 | 3_3:-88180555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTATTTAAACTTTGA+AGG | - | chr3_3:88180024-88180043 | None:intergenic | 10.0% |
| !! | TAGATAATATAAATTGTTCT+AGG | - | chr3_3:88177853-88177872 | None:intergenic | 15.0% |
| !! | GAAAATAATTGATAAAAAAG+TGG | + | chr3_3:88177914-88177933 | Msa0481810:five_prime_UTR | 15.0% |
| !! | AAAAAGATAATGAATAGTTT+GGG | - | chr3_3:88178076-88178095 | None:intergenic | 15.0% |
| !! | AAAAAAGATAATGAATAGTT+TGG | - | chr3_3:88178077-88178096 | None:intergenic | 15.0% |
| !! | TAAAATTTAAAGAGTGAATT+TGG | - | chr3_3:88178375-88178394 | None:intergenic | 15.0% |
| !!! | TATAGATCATAAATTTTCAA+GGG | - | chr3_3:88178991-88179010 | None:intergenic | 15.0% |
| !!! | ATATAGATCATAAATTTTCA+AGG | - | chr3_3:88178992-88179011 | None:intergenic | 15.0% |
| !!! | TCTATTTGAAATATTGAATT+TGG | + | chr3_3:88180404-88180423 | Msa0481810:intron | 15.0% |
| !! | TTAACATAAAAAAGAAAACA+AGG | + | chr3_3:88181163-88181182 | Msa0481810:three_prime_UTR | 15.0% |
| !! | GATTGAAAAAATGTAACAAA+AGG | - | chr3_3:88178265-88178284 | None:intergenic | 20.0% |
| !! | TCAATCATAGCTTAAATTTA+AGG | + | chr3_3:88178279-88178298 | Msa0481810:intron | 20.0% |
| !! | TATAATAAACTTAGCATTAG+TGG | - | chr3_3:88178310-88178329 | None:intergenic | 20.0% |
| !! | TATAAATTCACTTGTATGTT+TGG | + | chr3_3:88178326-88178345 | Msa0481810:intron | 20.0% |
| !!! | ACTCTTTAAATTTTATACTC+AGG | + | chr3_3:88178380-88178399 | Msa0481810:intron | 20.0% |
| !! | TGATATTATCTTGCAAAATA+AGG | + | chr3_3:88178574-88178593 | Msa0481810:five_prime_UTR | 20.0% |
| !!! | AACTATTAACCTTTTGTTTT+TGG | + | chr3_3:88178603-88178622 | Msa0481810:five_prime_UTR | 20.0% |
| !!! | ACTATTAACCTTTTGTTTTT+GGG | + | chr3_3:88178604-88178623 | Msa0481810:five_prime_UTR | 20.0% |
| !!! | ATAAATTTTTTTCAGAAGGA+GGG | - | chr3_3:88178884-88178903 | None:intergenic | 20.0% |
| !!! | AATAAATTTTTTTCAGAAGG+AGG | - | chr3_3:88178885-88178904 | None:intergenic | 20.0% |
| !!! | TCCTTCTGAAAAAAATTTAT+TGG | + | chr3_3:88178884-88178903 | Msa0481810:intron | 20.0% |
| !!! | ACCAATAAATTTTTTTCAGA+AGG | - | chr3_3:88178888-88178907 | None:intergenic | 20.0% |
| !! | TCTGAAAAAAATTTATTGGT+AGG | + | chr3_3:88178888-88178907 | Msa0481810:intron | 20.0% |
| !! | CTTGCGAAAAATAATTAAAT+AGG | + | chr3_3:88179113-88179132 | Msa0481810:intron | 20.0% |
| !! | AGAAACAGAATTCTTAAAAA+AGG | + | chr3_3:88179177-88179196 | Msa0481810:intron | 20.0% |
| !! | GAAACAGAATTCTTAAAAAA+GGG | + | chr3_3:88179178-88179197 | Msa0481810:intron | 20.0% |
| !!! | TGGAATTCTGTTATTTTTTA+CGG | - | chr3_3:88179565-88179584 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTGCAATATCTT+TGG | - | chr3_3:88179937-88179956 | None:intergenic | 20.0% |
| !!! | TATTGAATTTGGAATGATAT+AGG | + | chr3_3:88180415-88180434 | Msa0481810:intron | 20.0% |
| !!! | ATTGAATTTGGAATGATATA+GGG | + | chr3_3:88180416-88180435 | Msa0481810:intron | 20.0% |
| !!! | AAAATTTTCCAACTAAAAAC+AGG | - | chr3_3:88180603-88180622 | None:intergenic | 20.0% |
| !!! | AGTTGGAAAATTTTAATAGT+CGG | + | chr3_3:88180609-88180628 | Msa0481810:intron | 20.0% |
| !! | TGAAAATGTCATATAAATCA+GGG | - | chr3_3:88180832-88180851 | None:intergenic | 20.0% |
| !! | TTGAAAATGTCATATAAATC+AGG | - | chr3_3:88180833-88180852 | None:intergenic | 20.0% |
| !! | AACGCAGTAAATATAATATA+TGG | + | chr3_3:88180898-88180917 | Msa0481810:intron | 20.0% |
| ! | AAAAAGTGGAAAGAAAAAAG+CGG | + | chr3_3:88177928-88177947 | Msa0481810:five_prime_UTR | 25.0% |
| ! | AGATTATAATGACCTAATTG+AGG | - | chr3_3:88178120-88178139 | None:intergenic | 25.0% |
| ! | AATTGAAAAAACCTCTACTA+TGG | - | chr3_3:88178180-88178199 | None:intergenic | 25.0% |
| ! | TGAAACTCTTTAATCTGTTT+AGG | + | chr3_3:88178199-88178218 | Msa0481810:intron | 25.0% |
| ! | AACATTACTCAGTTAATTTC+AGG | - | chr3_3:88178705-88178724 | None:intergenic | 25.0% |
| !! | CATTTCTACACCTAATTTTT+CGG | + | chr3_3:88179391-88179410 | Msa0481810:intron | 25.0% |
| ! | TTTACATTCAATAATATCCC+AGG | - | chr3_3:88179458-88179477 | None:intergenic | 25.0% |
| ! | AATGTAAAGAGAATATTCAC+AGG | + | chr3_3:88179470-88179489 | Msa0481810:intron | 25.0% |
| !!! | TCTGTTTTATTAATCGTAGA+TGG | + | chr3_3:88179818-88179837 | Msa0481810:intron | 25.0% |
| ! | TTAATAGTTATGATGTGAGT+TGG | - | chr3_3:88179975-88179994 | None:intergenic | 25.0% |
| !!! | TCTGAGCTATATATTTTGAA+CGG | + | chr3_3:88180186-88180205 | Msa0481810:intron | 25.0% |
| !! | TTTGCTCTTTTTATATGACA+TGG | + | chr3_3:88180370-88180389 | Msa0481810:intron | 25.0% |
| !! | TTGAATTTGGAATGATATAG+GGG | + | chr3_3:88180417-88180436 | Msa0481810:intron | 25.0% |
| ! | CATATCAAAAAGAAAGCAAA+TGG | - | chr3_3:88180504-88180523 | None:intergenic | 25.0% |
| !! | CATTTGCTTTCTTTTTGATA+TGG | + | chr3_3:88180502-88180521 | Msa0481810:intron | 25.0% |
| GGAAAAAAGTAGAAAAGCTA+TGG | - | chr3_3:88177832-88177851 | None:intergenic | 30.0% | |
| AAAAGTGGAAAGAAAAAAGC+GGG | + | chr3_3:88177929-88177948 | Msa0481810:five_prime_UTR | 30.0% | |
| AATGAATAGTTTGGGAAGAA+AGG | - | chr3_3:88178068-88178087 | None:intergenic | 30.0% | |
| TAATTGAGGCAATAATAACG+AGG | - | chr3_3:88178106-88178125 | None:intergenic | 30.0% | |
| TCGTTATTATTGCCTCAATT+AGG | + | chr3_3:88178105-88178124 | Msa0481810:intron | 30.0% | |
| AAAACTTGGAACTAAGACTT+TGG | + | chr3_3:88178229-88178248 | Msa0481810:intron | 30.0% | |
| TTGCATCTGATGTTACAAAT+CGG | + | chr3_3:88178478-88178497 | Msa0481810:intron | 30.0% | |
| TATTGGTAGGCAATAAATAC+AGG | + | chr3_3:88178901-88178920 | Msa0481810:intron | 30.0% | |
| !!! | ATTTTTTACGGTTGTAAGCT+AGG | - | chr3_3:88179553-88179572 | None:intergenic | 30.0% |
| GTTTAGCAAGTTCATTATAG+AGG | - | chr3_3:88179691-88179710 | None:intergenic | 30.0% | |
| !! | TAATGAACTTGCTAAACCTT+AGG | + | chr3_3:88179694-88179713 | Msa0481810:intron | 30.0% |
| !! | AATGAACTTGCTAAACCTTA+GGG | + | chr3_3:88179695-88179714 | Msa0481810:intron | 30.0% |
| AATAAAACAGACAGTGATCT+TGG | - | chr3_3:88179809-88179828 | None:intergenic | 30.0% | |
| !! | GTTTTATTAATCGTAGATGG+TGG | + | chr3_3:88179821-88179840 | Msa0481810:intron | 30.0% |
| TATGGTGATCACTCAAAAAT+AGG | + | chr3_3:88179846-88179865 | Msa0481810:intron | 30.0% | |
| ATGGTGATCACTCAAAAATA+GGG | + | chr3_3:88179847-88179866 | Msa0481810:intron | 30.0% | |
| GTTTATATTCTATCTGCCAT+AGG | - | chr3_3:88179898-88179917 | None:intergenic | 30.0% | |
| ! | TAGAATTGTTGGTGAATTAG+AGG | + | chr3_3:88180081-88180100 | Msa0481810:intron | 30.0% |
| ! | AGAATTGTTGGTGAATTAGA+GGG | + | chr3_3:88180082-88180101 | Msa0481810:intron | 30.0% |
| GCTAGATTACTGTTACTATT+AGG | - | chr3_3:88180129-88180148 | None:intergenic | 30.0% | |
| !! | CTGAGCTATATATTTTGAAC+GGG | + | chr3_3:88180187-88180206 | Msa0481810:intron | 30.0% |
| AGAACTTTATGACTCAAACT+TGG | + | chr3_3:88180294-88180313 | Msa0481810:intron | 30.0% | |
| AAGCAAGACATGTTCAAATA+GGG | + | chr3_3:88180337-88180356 | Msa0481810:intron | 30.0% | |
| CATGTGCAATATACAACAAT+TGG | + | chr3_3:88180529-88180548 | Msa0481810:CDS | 30.0% | |
| TTCAATTCAATATGAGTGCA+CGG | + | chr3_3:88180848-88180867 | Msa0481810:intron | 30.0% | |
| !!! | TATTTTTTTCCAACATACGC+TGG | - | chr3_3:88181346-88181365 | None:intergenic | 30.0% |
| CAATTAGCAATCCATAGTAG+AGG | + | chr3_3:88178166-88178185 | Msa0481810:intron | 35.0% | |
| GTTTAGGTCGTAACAAAACT+TGG | + | chr3_3:88178215-88178234 | Msa0481810:intron | 35.0% | |
| !! | TGGAACTAAGACTTTGGAAT+AGG | + | chr3_3:88178235-88178254 | Msa0481810:intron | 35.0% |
| ! | ATGTTACAAATCGGTGTTCT+GGG | + | chr3_3:88178487-88178506 | Msa0481810:intron | 35.0% |
| CTACACATCCCAAAAACAAA+AGG | - | chr3_3:88178615-88178634 | None:intergenic | 35.0% | |
| ! | TAGCATTTTGCTACAGATTC+TGG | + | chr3_3:88178665-88178684 | Msa0481810:CDS | 35.0% |
| GTTCTGTAATCATGCAGAAT+AGG | + | chr3_3:88178923-88178942 | Msa0481810:intron | 35.0% | |
| AAGAAGAAGCAAGAGAAACA+CGG | + | chr3_3:88179013-88179032 | Msa0481810:intron | 35.0% | |
| ! | GGATATTTGAGAGATTTTGC+AGG | + | chr3_3:88179199-88179218 | Msa0481810:intron | 35.0% |
| TGCAATTTCGTCATGATACA+CGG | + | chr3_3:88179258-88179277 | Msa0481810:intron | 35.0% | |
| TTTGAGTGTGCCGAAAAATT+AGG | - | chr3_3:88179404-88179423 | None:intergenic | 35.0% | |
| ! | TTTTCGGCACACTCAAATTT+AGG | + | chr3_3:88179407-88179426 | Msa0481810:intron | 35.0% |
| ATAATATCCCAGGCAATTCA+TGG | - | chr3_3:88179448-88179467 | None:intergenic | 35.0% | |
| !!! | GTACGTAGTCATTTTTTGTG+TGG | - | chr3_3:88179585-88179604 | None:intergenic | 35.0% |
| ATGTGTAAGGTTCGTATAAG+GGG | - | chr3_3:88179620-88179639 | None:intergenic | 35.0% | |
| CATGTGTAAGGTTCGTATAA+GGG | - | chr3_3:88179621-88179640 | None:intergenic | 35.0% | |
| AGTTCATTATAGAGGTAGGA+AGG | - | chr3_3:88179683-88179702 | None:intergenic | 35.0% | |
| AGCAAGTTCATTATAGAGGT+AGG | - | chr3_3:88179687-88179706 | None:intergenic | 35.0% | |
| AATATTCCAAGTGAGGAAAC+AGG | - | chr3_3:88179757-88179776 | None:intergenic | 35.0% | |
| ATAGGGCATATAGATATTGC+TGG | + | chr3_3:88179864-88179883 | Msa0481810:intron | 35.0% | |
| !! | AGCTATATATTTTGAACGGG+TGG | + | chr3_3:88180190-88180209 | Msa0481810:intron | 35.0% |
| ACTCAAACTTGGATTGAACA+GGG | + | chr3_3:88180305-88180324 | Msa0481810:intron | 35.0% | |
| GAAGCAAGACATGTTCAAAT+AGG | + | chr3_3:88180336-88180355 | Msa0481810:intron | 35.0% | |
| ! | TGCTTTCTTTTTGATATGGC+AGG | + | chr3_3:88180506-88180525 | Msa0481810:intron | 35.0% |
| GTGCAATATACAACAATTGG+TGG | + | chr3_3:88180532-88180551 | Msa0481810:CDS | 35.0% | |
| ACTAACTCACCTGATAACAT+GGG | - | chr3_3:88180558-88180577 | None:intergenic | 35.0% | |
| !! | TTAGTCTTTTGTGCTCAAAC+TGG | + | chr3_3:88180573-88180592 | Msa0481810:intron | 35.0% |
| ACGACTGATTAGAAATTGAG+TGG | - | chr3_3:88180702-88180721 | None:intergenic | 35.0% | |
| CAATTTCTAATCAGTCGTGA+TGG | + | chr3_3:88180704-88180723 | Msa0481810:CDS | 35.0% | |
| ATATGGTATTATGCTGCAGT+TGG | + | chr3_3:88180915-88180934 | Msa0481810:intron | 35.0% | |
| TAGCCATTCCTATAATCCTT+AGG | + | chr3_3:88180984-88181003 | Msa0481810:CDS | 35.0% | |
| ATGCCTAAGGATTATAGGAA+TGG | - | chr3_3:88180990-88181009 | None:intergenic | 35.0% | |
| GTTATTACCAATCATCGTCA+AGG | - | chr3_3:88181102-88181121 | None:intergenic | 35.0% | |
| CTAGCAGGACATAATAACTA+TGG | - | chr3_3:88181130-88181149 | None:intergenic | 35.0% | |
| ATTATGTCCTGCTAGTCATT+AGG | + | chr3_3:88181135-88181154 | Msa0481810:three_prime_UTR | 35.0% | |
| TTATGTCCTGCTAGTCATTA+GGG | + | chr3_3:88181136-88181155 | Msa0481810:three_prime_UTR | 35.0% | |
| GCAACTTATATGACTTCCTT+TGG | + | chr3_3:88181259-88181278 | Msa0481810:three_prime_UTR | 35.0% | |
| TAAGGACAAAGGTAAACCAA+AGG | - | chr3_3:88181278-88181297 | None:intergenic | 35.0% | |
| ! | TTTGGTTTACCTTTGTCCTT+AGG | + | chr3_3:88181277-88181296 | Msa0481810:three_prime_UTR | 35.0% |
| TTGGTTTACCTTTGTCCTTA+GGG | + | chr3_3:88181278-88181297 | Msa0481810:three_prime_UTR | 35.0% | |
| TCAGTTCCGTTACTTGCAAT+CGG | + | chr3_3:88177980-88177999 | Msa0481810:five_prime_UTR | 40.0% | |
| CGATTTCCGATTGCAAGTAA+CGG | - | chr3_3:88177989-88178008 | None:intergenic | 40.0% | |
| TCTCCATCTCAATTCGCTTA+TGG | + | chr3_3:88178137-88178156 | Msa0481810:intron | 40.0% | |
| CAACCATAAGCGAATTGAGA+TGG | - | chr3_3:88178143-88178162 | None:intergenic | 40.0% | |
| ! | GATGTTACAAATCGGTGTTC+TGG | + | chr3_3:88178486-88178505 | Msa0481810:intron | 40.0% |
| ! | TGTTACAAATCGGTGTTCTG+GGG | + | chr3_3:88178488-88178507 | Msa0481810:intron | 40.0% |
| !! | TAGACTGCTTTTCAGGGTTA+TGG | - | chr3_3:88178798-88178817 | None:intergenic | 40.0% |
| AGAAGAAGCAAGAGAAACAC+GGG | + | chr3_3:88179014-88179033 | Msa0481810:intron | 40.0% | |
| ! | ATTTTGCAGGTGAAGCCTAA+AGG | + | chr3_3:88179212-88179231 | Msa0481810:intron | 40.0% |
| AATTCATGGTCAGGCTTAGT+GGG | - | chr3_3:88179434-88179453 | None:intergenic | 40.0% | |
| ! | AAGGTGCTTCTATCCTCTAA+TGG | - | chr3_3:88179529-88179548 | None:intergenic | 40.0% |
| TTACGGTTGTAAGCTAGGTA+AGG | - | chr3_3:88179548-88179567 | None:intergenic | 40.0% | |
| GCATGTGTAAGGTTCGTATA+AGG | - | chr3_3:88179622-88179641 | None:intergenic | 40.0% | |
| AGTTAGTTAGCAGCAGGAAT+GGG | - | chr3_3:88179649-88179668 | None:intergenic | 40.0% | |
| AAGTTAGTTAGCAGCAGGAA+TGG | - | chr3_3:88179650-88179669 | None:intergenic | 40.0% | |
| ATTCCTGCTGCTAACTAACT+TGG | + | chr3_3:88179649-88179668 | Msa0481810:intron | 40.0% | |
| TTCCTGCTGCTAACTAACTT+GGG | + | chr3_3:88179650-88179669 | Msa0481810:intron | 40.0% | |
| CTAAACCTTAGGGCTTACTT+AGG | + | chr3_3:88179705-88179724 | Msa0481810:intron | 40.0% | |
| CAGAAGGAATATTCCAAGTG+AGG | - | chr3_3:88179764-88179783 | None:intergenic | 40.0% | |
| CACTTGGAATATTCCTTCTG+TGG | + | chr3_3:88179764-88179783 | Msa0481810:intron | 40.0% | |
| TGGAATATTCCTTCTGTGGA+TGG | + | chr3_3:88179768-88179787 | Msa0481810:intron | 40.0% | |
| ACAGTGATCTTGGAGTTTGA+GGG | - | chr3_3:88179799-88179818 | None:intergenic | 40.0% | |
| !! | TAATCGTAGATGGTGGACTA+TGG | + | chr3_3:88179828-88179847 | Msa0481810:intron | 40.0% |
| !! | TATAGATATTGCTGGCTCTG+TGG | + | chr3_3:88179872-88179891 | Msa0481810:intron | 40.0% |
| GAACATGCTGCTAGAATTGT+TGG | + | chr3_3:88180070-88180089 | Msa0481810:intron | 40.0% | |
| ! | ATTGTTGGTGAATTAGAGGG+AGG | + | chr3_3:88180085-88180104 | Msa0481810:intron | 40.0% |
| ! | ATCCTCTCCCAATGAGTTTT+GGG | - | chr3_3:88180265-88180284 | None:intergenic | 40.0% |
| GACTCAAACTTGGATTGAAC+AGG | + | chr3_3:88180304-88180323 | Msa0481810:intron | 40.0% | |
| GACTAACTCACCTGATAACA+TGG | - | chr3_3:88180559-88180578 | None:intergenic | 40.0% | |
| !!! | CTGGAAGTCCTGTTTTTAGT+TGG | + | chr3_3:88180592-88180611 | Msa0481810:intron | 40.0% |
| CCAAAGAATAAGCAAGGCAT+AGG | - | chr3_3:88180671-88180690 | None:intergenic | 40.0% | |
| CCTATGCCTTGCTTATTCTT+TGG | + | chr3_3:88180668-88180687 | Msa0481810:CDS | 40.0% | |
| ATGCCTTGCTTATTCTTTGG+AGG | + | chr3_3:88180671-88180690 | Msa0481810:CDS | 40.0% | |
| ! | CTTGCTTATTCTTTGGAGGT+GGG | + | chr3_3:88180675-88180694 | Msa0481810:CDS | 40.0% |
| TTTCTAATCAGTCGTGATGG+TGG | + | chr3_3:88180707-88180726 | Msa0481810:CDS | 40.0% | |
| TTCTAATCAGTCGTGATGGT+GGG | + | chr3_3:88180708-88180727 | Msa0481810:CDS | 40.0% | |
| ! | GATGCTGCAAAGTTTTTGAC+TGG | + | chr3_3:88180941-88180960 | Msa0481810:CDS | 40.0% |
| ! | TTTGACTGGAGCATCATCTA+TGG | + | chr3_3:88180955-88180974 | Msa0481810:CDS | 40.0% |
| ! | TTGACTGGAGCATCATCTAT+GGG | + | chr3_3:88180956-88180975 | Msa0481810:CDS | 40.0% |
| TGTGCATGCCTAAGGATTAT+AGG | - | chr3_3:88180995-88181014 | None:intergenic | 40.0% | |
| AACAATCCCTAATGACTAGC+AGG | - | chr3_3:88181145-88181164 | None:intergenic | 40.0% | |
| GAAGAACGATACAGTTTCCA+TGG | - | chr3_3:88181207-88181226 | None:intergenic | 40.0% | |
| ! | GCTTTTACTTACACACCCTA+AGG | - | chr3_3:88181296-88181315 | None:intergenic | 40.0% |
| ACATAAAAGCCAACCCAGCA+AGG | - | chr3_3:88178638-88178657 | None:intergenic | 45.0% | |
| ACCCTGAAAAGCAGTCTACT+AGG | + | chr3_3:88178800-88178819 | Msa0481810:intron | 45.0% | |
| !! | GCCTAGTAGACTGCTTTTCA+GGG | - | chr3_3:88178804-88178823 | None:intergenic | 45.0% |
| !! | TGCCTAGTAGACTGCTTTTC+AGG | - | chr3_3:88178805-88178824 | None:intergenic | 45.0% |
| AGAAACACGGGATTCACACT+TGG | + | chr3_3:88179026-88179045 | Msa0481810:intron | 45.0% | |
| AACCAGCACACTGTTGAATG+TGG | + | chr3_3:88179285-88179304 | Msa0481810:intron | 45.0% | |
| ATTCATGGTCAGGCTTAGTG+GGG | - | chr3_3:88179433-88179452 | None:intergenic | 45.0% | |
| CAATTCATGGTCAGGCTTAG+TGG | - | chr3_3:88179435-88179454 | None:intergenic | 45.0% | |
| ! | TCGTATAAGGGGATAGTGGT+AGG | - | chr3_3:88179609-88179628 | None:intergenic | 45.0% |
| AGGTTCGTATAAGGGGATAG+TGG | - | chr3_3:88179613-88179632 | None:intergenic | 45.0% | |
| GAATGGGTCTTGCATGTGTA+AGG | - | chr3_3:88179633-88179652 | None:intergenic | 45.0% | |
| TCATGCCTAAGTAAGCCCTA+AGG | - | chr3_3:88179713-88179732 | None:intergenic | 45.0% | |
| AAGTGAGGAAACAGGACACA+AGG | - | chr3_3:88179749-88179768 | None:intergenic | 45.0% | |
| TTGTGTCCTGTTTCCTCACT+TGG | + | chr3_3:88179748-88179767 | Msa0481810:intron | 45.0% | |
| CAGTGATCTTGGAGTTTGAG+GGG | - | chr3_3:88179798-88179817 | None:intergenic | 45.0% | |
| GACAGTGATCTTGGAGTTTG+AGG | - | chr3_3:88179800-88179819 | None:intergenic | 45.0% | |
| ! | CTTTGAAGGCTCGAATCTGA+TGG | - | chr3_3:88180010-88180029 | None:intergenic | 45.0% |
| CAGTAATCTAGCGACTAGCA+AGG | + | chr3_3:88180137-88180156 | Msa0481810:intron | 45.0% | |
| TAGCTGTGAGTCCTCAAACT+TGG | + | chr3_3:88180224-88180243 | Msa0481810:intron | 45.0% | |
| AGGTCAGACCCAAAACTCAT+TGG | + | chr3_3:88180254-88180273 | Msa0481810:intron | 45.0% | |
| GGTCAGACCCAAAACTCATT+GGG | + | chr3_3:88180255-88180274 | Msa0481810:intron | 45.0% | |
| ! | CATCCTCTCCCAATGAGTTT+TGG | - | chr3_3:88180266-88180285 | None:intergenic | 45.0% |
| CAAAACTCATTGGGAGAGGA+TGG | + | chr3_3:88180264-88180283 | Msa0481810:intron | 45.0% | |
| ! | AATTGGTGGCCCATGTTATC+AGG | + | chr3_3:88180546-88180565 | Msa0481810:CDS | 45.0% |
| CCACCTCCAAAGAATAAGCA+AGG | - | chr3_3:88180677-88180696 | None:intergenic | 45.0% | |
| ! | CCTTGCTTATTCTTTGGAGG+TGG | + | chr3_3:88180674-88180693 | Msa0481810:CDS | 45.0% |
| ! | TCTAATCAGTCGTGATGGTG+GGG | + | chr3_3:88180709-88180728 | Msa0481810:CDS | 45.0% |
| GTCTCTTGCTTACAGTTCTC+TGG | + | chr3_3:88180739-88180758 | Msa0481810:intron | 45.0% | |
| GGTATTATGCTGCAGTTGGA+TGG | + | chr3_3:88180919-88180938 | Msa0481810:intron | 45.0% | |
| ! | TGACTGGAGCATCATCTATG+GGG | + | chr3_3:88180957-88180976 | Msa0481810:CDS | 45.0% |
| CAATCATGTGTGCATGCCTA+AGG | - | chr3_3:88181003-88181022 | None:intergenic | 45.0% | |
| CATGCACACATGATTGAGAC+TGG | + | chr3_3:88181007-88181026 | Msa0481810:CDS | 45.0% | |
| GCTGAGACTTAATACAGCCA+TGG | + | chr3_3:88181187-88181206 | Msa0481810:three_prime_UTR | 45.0% | |
| CTTACACACCCTAAGGACAA+AGG | - | chr3_3:88181289-88181308 | None:intergenic | 45.0% | |
| !!! | TTTTAATTTTTTTTTTTTGA+GGG | - | chr3_3:88177800-88177819 | None:intergenic | 5.0% |
| !!! | TTTTTAATTTTTTTTTTTTG+AGG | - | chr3_3:88177801-88177820 | None:intergenic | 5.0% |
| GAAGAGAGAGATAGCTCCCA+TGG | + | chr3_3:88178008-88178027 | Msa0481810:five_prime_UTR | 50.0% | |
| ! | TTTGGGATGTGTAGCCTTGC+TGG | + | chr3_3:88178621-88178640 | Msa0481810:exon | 50.0% |
| ! | TTGGGATGTGTAGCCTTGCT+GGG | + | chr3_3:88178622-88178641 | Msa0481810:exon | 50.0% |
| CACACTTGGCACACAGAAGT+AGG | + | chr3_3:88179040-88179059 | Msa0481810:intron | 50.0% | |
| TGCCACATTCAACAGTGTGC+TGG | - | chr3_3:88179290-88179309 | None:intergenic | 50.0% | |
| !!! | TGTCAATCGTGCCGCTTTTG+CGG | - | chr3_3:88179363-88179382 | None:intergenic | 50.0% |
| AAGCCTGACCATGAATTGCC+TGG | + | chr3_3:88179437-88179456 | Msa0481810:intron | 50.0% | |
| AGCCTGACCATGAATTGCCT+GGG | + | chr3_3:88179438-88179457 | Msa0481810:intron | 50.0% | |
| ATCCCAGGCAATTCATGGTC+AGG | - | chr3_3:88179443-88179462 | None:intergenic | 50.0% | |
| TCCTGTGCATTCACAGAGCT+TGG | + | chr3_3:88179501-88179520 | Msa0481810:intron | 50.0% | |
| ACAGAGCTTGGCTCCATTAG+AGG | + | chr3_3:88179513-88179532 | Msa0481810:intron | 50.0% | |
| CTCCCAAGTTAGTTAGCAGC+AGG | - | chr3_3:88179655-88179674 | None:intergenic | 50.0% | |
| TGAGGAAACAGGACACAAGG+TGG | - | chr3_3:88179746-88179765 | None:intergenic | 50.0% | |
| CTGTGAGTCCTCAAACTTGG+AGG | + | chr3_3:88180227-88180246 | Msa0481810:intron | 50.0% | |
| TCCTCAAACTTGGAGGTCTC+AGG | + | chr3_3:88180234-88180253 | Msa0481810:intron | 50.0% | |
| ACCTGAGACCTCCAAGTTTG+AGG | - | chr3_3:88180238-88180257 | None:intergenic | 50.0% | |
| GACCCAAAACTCATTGGGAG+AGG | + | chr3_3:88180260-88180279 | Msa0481810:intron | 50.0% | |
| CTCATTGGGAGAGGATGGAT+AGG | + | chr3_3:88180269-88180288 | Msa0481810:intron | 50.0% | |
| AGCACATACATCAGAGCTGC+AGG | - | chr3_3:88180644-88180663 | None:intergenic | 50.0% | |
| ! | TGCAGCTCTGATGTATGTGC+TGG | + | chr3_3:88180643-88180662 | Msa0481810:intron | 50.0% |
| !! | CTAATCAGTCGTGATGGTGG+GGG | + | chr3_3:88180710-88180729 | Msa0481810:CDS | 50.0% |
| !! | TAATCAGTCGTGATGGTGGG+GGG | + | chr3_3:88180711-88180730 | Msa0481810:CDS | 50.0% |
| AATCATCGTCAAGGCTCGCT+TGG | - | chr3_3:88181093-88181112 | None:intergenic | 50.0% | |
| AAGCGAGCCTTGACGATGAT+TGG | + | chr3_3:88181092-88181111 | Msa0481810:CDS | 50.0% | |
| ! | CTTTTCTCGCCAGCGTATGT+TGG | + | chr3_3:88181334-88181353 | Msa0481810:three_prime_UTR | 50.0% |
| CCGTGTACTGTCATCGCCAT+GGG | - | chr3_3:88178027-88178046 | None:intergenic | 55.0% | |
| CCCATGGCGATGACAGTACA+CGG | + | chr3_3:88178024-88178043 | Msa0481810:five_prime_UTR | 55.0% | |
| ACCGTGTACTGTCATCGCCA+TGG | - | chr3_3:88178028-88178047 | None:intergenic | 55.0% | |
| ! | GATGTGTAGCCTTGCTGGGT+TGG | + | chr3_3:88178626-88178645 | Msa0481810:exon | 55.0% |
| GCAGGCTTGTGTCTGCCTTT+AGG | - | chr3_3:88179230-88179249 | None:intergenic | 55.0% | |
| GCAGACACAAGCCTGCGATT+GGG | + | chr3_3:88179234-88179253 | Msa0481810:intron | 55.0% | |
| CGAAATTGCAGCCCAATCGC+AGG | - | chr3_3:88179248-88179267 | None:intergenic | 55.0% | |
| !!! | GTCAATCGTGCCGCTTTTGC+GGG | - | chr3_3:88179362-88179381 | None:intergenic | 55.0% |
| GCCAAGCTCTGTGAATGCAC+AGG | - | chr3_3:88179505-88179524 | None:intergenic | 55.0% | |
| AGGGGTCTACCATCCACAGA+AGG | - | chr3_3:88179780-88179799 | None:intergenic | 55.0% | |
| !! | ATTGCTGGCTCTGTGGCCTA+TGG | + | chr3_3:88179879-88179898 | Msa0481810:intron | 55.0% |
| GGCAGACACAAGCCTGCGAT+TGG | + | chr3_3:88179233-88179252 | Msa0481810:intron | 60.0% | |
| TGGCACGTAACTCGTCGCAG+TGG | + | chr3_3:88179305-88179324 | Msa0481810:intron | 60.0% | |
| GCGATCACGGACTCGTGTAG+CGG | - | chr3_3:88179340-88179359 | None:intergenic | 60.0% | |
| TCCGTGATCGCCCGCAAAAG+CGG | + | chr3_3:88179349-88179368 | Msa0481810:intron | 60.0% | |
| CATCGTCAAGGCTCGCTTGG+TGG | - | chr3_3:88181090-88181109 | None:intergenic | 60.0% | |
| GGACTCGTGTAGCGGCAGAG+AGG | - | chr3_3:88179332-88179351 | None:intergenic | 65.0% | |
| !!! | GCCGCTTTTGCGGGCGATCA+CGG | - | chr3_3:88179353-88179372 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 88177746 | 88181365 | 88177746 | ID=Msa0481810;Name=Msa0481810 |
| chr3_3 | mRNA | 88177746 | 88181365 | 88177746 | ID=Msa0481810-mRNA-1;Parent=Msa0481810;Name=Msa0481810-mRNA-1;_AED=0.03;_eAED=0.03;_QI=392|1|1|1|0.75|0.6|5|248|122 |
| chr3_3 | exon | 88177746 | 88178045 | 88177746 | ID=Msa0481810-mRNA-1:exon:25603;Parent=Msa0481810-mRNA-1 |
| chr3_3 | exon | 88178535 | 88178686 | 88178535 | ID=Msa0481810-mRNA-1:exon:25604;Parent=Msa0481810-mRNA-1 |
| chr3_3 | exon | 88180528 | 88180567 | 88180528 | ID=Msa0481810-mRNA-1:exon:25605;Parent=Msa0481810-mRNA-1 |
| chr3_3 | exon | 88180648 | 88180732 | 88180648 | ID=Msa0481810-mRNA-1:exon:25606;Parent=Msa0481810-mRNA-1 |
| chr3_3 | exon | 88180934 | 88181365 | 88180934 | ID=Msa0481810-mRNA-1:exon:25607;Parent=Msa0481810-mRNA-1 |
| chr3_3 | five_prime_UTR | 88177746 | 88178045 | 88177746 | ID=Msa0481810-mRNA-1:five_prime_utr;Parent=Msa0481810-mRNA-1 |
| chr3_3 | five_prime_UTR | 88178535 | 88178626 | 88178535 | ID=Msa0481810-mRNA-1:five_prime_utr;Parent=Msa0481810-mRNA-1 |
| chr3_3 | CDS | 88178627 | 88178686 | 88178627 | ID=Msa0481810-mRNA-1:cds;Parent=Msa0481810-mRNA-1 |
| chr3_3 | CDS | 88180528 | 88180567 | 88180528 | ID=Msa0481810-mRNA-1:cds;Parent=Msa0481810-mRNA-1 |
| chr3_3 | CDS | 88180648 | 88180732 | 88180648 | ID=Msa0481810-mRNA-1:cds;Parent=Msa0481810-mRNA-1 |
| chr3_3 | CDS | 88180934 | 88181117 | 88180934 | ID=Msa0481810-mRNA-1:cds;Parent=Msa0481810-mRNA-1 |
| chr3_3 | three_prime_UTR | 88181118 | 88181365 | 88181118 | ID=Msa0481810-mRNA-1:three_prime_utr;Parent=Msa0481810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
