Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004360 | sp|Q94CH6|EXL3_ARATH | 46.667 | 315 | 141 | 4 | 1 | 290 | 52 | 364 | 3.86e-101 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0004360 | 0.800478 | 1.414606e-48 | -8.615850e-47 |
| Msa0003470 | Msa0004360 | 0.819903 | 9.094558e-53 | -8.615850e-47 |
| Msa0004360 | Msa0005050 | 0.856071 | 4.121492e-62 | -8.615850e-47 |
| Msa0004360 | Msa0030310 | 0.809621 | 1.728605e-50 | -8.615850e-47 |
| Msa0004360 | Msa0032840 | -0.823246 | 1.535825e-53 | -8.615850e-47 |
| Msa0004360 | Msa0036430 | 0.816538 | 5.253036e-52 | -8.615850e-47 |
| Msa0004360 | Msa0041540 | 0.804987 | 1.659451e-49 | -8.615850e-47 |
| Msa0004360 | Msa0043940 | 0.805282 | 1.439312e-49 | -8.615850e-47 |
| Msa0004360 | Msa0048020 | 0.807598 | 4.674999e-50 | -8.615850e-47 |
| Msa0004360 | Msa0050580 | 0.802251 | 6.129366e-49 | -8.615850e-47 |
| Msa0004360 | Msa0053110 | 0.876327 | 1.525248e-68 | -8.615850e-47 |
| Msa0004360 | Msa0072810 | 0.935599 | 6.584346e-97 | -8.615850e-47 |
| Msa0004360 | Msa0092710 | 0.806954 | 6.399985e-50 | -8.615850e-47 |
| Msa0004360 | Msa0098440 | 0.842140 | 3.101043e-58 | -8.615850e-47 |
| Msa0004360 | Msa0103000 | 0.906562 | 1.299290e-80 | -8.615850e-47 |
| Msa0004360 | Msa0125580 | 0.802700 | 4.953838e-49 | -8.615850e-47 |
| Msa0004360 | Msa0134130 | 0.826684 | 2.369767e-54 | -8.615850e-47 |
| Msa0004360 | Msa0135980 | 0.808457 | 3.068618e-50 | -8.615850e-47 |
| Msa0004360 | Msa0139900 | 0.842095 | 3.187037e-58 | -8.615850e-47 |
| Msa0004360 | Msa0141430 | 0.808823 | 2.562361e-50 | -8.615850e-47 |
| Msa0004360 | Msa0141830 | 0.808994 | 2.355326e-50 | -8.615850e-47 |
| Msa0004360 | Msa0146470 | 0.806286 | 8.856711e-50 | -8.615850e-47 |
| Msa0004360 | Msa0147560 | 0.867554 | 1.256315e-65 | -8.615850e-47 |
| Msa0004360 | Msa0169570 | 0.802191 | 6.306989e-49 | -8.615850e-47 |
| Msa0004360 | Msa0172350 | 0.825412 | 4.755102e-54 | -8.615850e-47 |
| Msa0004360 | Msa0172960 | -0.824517 | 7.732298e-54 | -8.615850e-47 |
| Msa0004360 | Msa0200970 | 0.817561 | 3.093043e-52 | -8.615850e-47 |
| Msa0004360 | Msa0203160 | 0.817890 | 2.607170e-52 | -8.615850e-47 |
| Msa0004360 | Msa0230550 | -0.826414 | 2.748078e-54 | -8.615850e-47 |
| Msa0004360 | Msa0239660 | 0.809065 | 2.274985e-50 | -8.615850e-47 |
| Msa0004360 | Msa0257310 | 0.812307 | 4.528019e-51 | -8.615850e-47 |
| Msa0004360 | Msa0267760 | 0.830800 | 2.394594e-55 | -8.615850e-47 |
| Msa0004360 | Msa0280490 | 0.808197 | 3.486385e-50 | -8.615850e-47 |
| Msa0004360 | Msa0297920 | 0.828522 | 8.581790e-55 | -8.615850e-47 |
| Msa0004360 | Msa0319200 | 0.816803 | 4.580535e-52 | -8.615850e-47 |
| Msa0004360 | Msa0337850 | 0.823424 | 1.395550e-53 | -8.615850e-47 |
| Msa0004360 | Msa0339860 | 0.809539 | 1.799780e-50 | -8.615850e-47 |
| Msa0004360 | Msa0370600 | 0.819420 | 1.172194e-52 | -8.615850e-47 |
| Msa0004360 | Msa0413930 | 0.809711 | 1.653103e-50 | -8.615850e-47 |
| Msa0004360 | Msa0418200 | 0.816964 | 4.214843e-52 | -8.615850e-47 |
| Msa0004360 | Msa0418220 | 0.806826 | 6.811833e-50 | -8.615850e-47 |
| Msa0004360 | Msa0436450 | 0.812312 | 4.516171e-51 | -8.615850e-47 |
| Msa0004360 | Msa0436460 | 0.829056 | 6.373540e-55 | -8.615850e-47 |
| Msa0004360 | Msa0436500 | 0.805216 | 1.485963e-49 | -8.615850e-47 |
| Msa0004360 | Msa0464540 | 0.815301 | 9.915202e-52 | -8.615850e-47 |
| Msa0004360 | Msa0464630 | 0.801260 | 9.792647e-49 | -8.615850e-47 |
| Msa0004360 | Msa0484690 | 0.833215 | 6.062588e-56 | -8.615850e-47 |
| Msa0004360 | Msa0510440 | 0.811453 | 6.947539e-51 | -8.615850e-47 |
| Msa0004360 | Msa0524120 | 0.807076 | 6.029665e-50 | -8.615850e-47 |
| Msa0004360 | Msa0526700 | 0.827443 | 1.559968e-54 | -8.615850e-47 |
| Msa0004360 | Msa0526710 | 0.819617 | 1.057012e-52 | -8.615850e-47 |
| Msa0004360 | Msa0527590 | 0.811537 | 6.663673e-51 | -8.615850e-47 |
| Msa0004360 | Msa0532840 | 0.825137 | 5.523702e-54 | -8.615850e-47 |
| Msa0004360 | Msa0533010 | 0.824003 | 1.021073e-53 | -8.615850e-47 |
| Msa0004360 | Msa0538570 | 0.832078 | 1.160511e-55 | -8.615850e-47 |
| Msa0004360 | Msa0546380 | 0.804089 | 2.553295e-49 | -8.615850e-47 |
| Msa0004360 | Msa0546740 | 0.820630 | 6.196238e-53 | -8.615850e-47 |
| Msa0004360 | Msa0553150 | 0.811220 | 7.807324e-51 | -8.615850e-47 |
| Msa0004360 | Msa0555910 | 0.806624 | 7.516805e-50 | -8.615850e-47 |
| Msa0004360 | Msa0561510 | 0.811391 | 7.168248e-51 | -8.615850e-47 |
| Msa0004360 | Msa0594390 | 0.836954 | 6.913330e-57 | -8.615850e-47 |
| Msa0004360 | Msa0619980 | 0.816160 | 6.381432e-52 | -8.615850e-47 |
| Msa0004360 | Msa0633750 | 0.813912 | 2.012912e-51 | -8.615850e-47 |
| Msa0004360 | Msa0642650 | 0.844767 | 6.164246e-59 | -8.615850e-47 |
| Msa0004360 | Msa0647380 | 0.808078 | 3.696144e-50 | -8.615850e-47 |
| Msa0004360 | Msa0667970 | 0.802492 | 5.468457e-49 | -8.615850e-47 |
| Msa0004360 | Msa0672110 | 0.810505 | 1.115014e-50 | -8.615850e-47 |
| Msa0004360 | Msa0678860 | 0.805861 | 1.087999e-49 | -8.615850e-47 |
| Msa0004360 | Msa0681890 | 0.825689 | 4.087185e-54 | -8.615850e-47 |
| Msa0004360 | Msa0692080 | 0.816795 | 4.599910e-52 | -8.615850e-47 |
| Msa0004360 | Msa0696620 | 0.805797 | 1.122532e-49 | -8.615850e-47 |
| Msa0004360 | Msa0706370 | 0.806220 | 9.142067e-50 | -8.615850e-47 |
| Msa0004360 | Msa0716790 | 0.820756 | 5.797422e-53 | -8.615850e-47 |
| Msa0004360 | Msa0725920 | 0.837037 | 6.581617e-57 | -8.615850e-47 |
| Msa0004360 | Msa0734660 | 0.800857 | 1.183541e-48 | -8.615850e-47 |
| Msa0004360 | Msa0747780 | 0.870290 | 1.632158e-66 | -8.615850e-47 |
| Msa0004360 | Msa0757870 | 0.813227 | 2.847760e-51 | -8.615850e-47 |
| Msa0004360 | Msa0766470 | 0.821303 | 4.338486e-53 | -8.615850e-47 |
| Msa0004360 | Msa0775440 | 0.807364 | 5.240276e-50 | -8.615850e-47 |
| Msa0004360 | Msa0776220 | 0.836247 | 1.046210e-56 | -8.615850e-47 |
| Msa0004360 | Msa0787750 | 0.819947 | 8.888206e-53 | -8.615850e-47 |
| Msa0004360 | Msa0799210 | 0.842588 | 2.359945e-58 | -8.615850e-47 |
| Msa0004360 | Msa0803130 | 0.831949 | 1.248796e-55 | -8.615850e-47 |
| Msa0004360 | Msa0833040 | 0.806736 | 7.115736e-50 | -8.615850e-47 |
| Msa0004360 | Msa0841490 | 0.827350 | 1.642711e-54 | -8.615850e-47 |
| Msa0004360 | Msa0846030 | 0.847985 | 8.176350e-60 | -8.615850e-47 |
| Msa0004360 | Msa0854120 | 0.820734 | 5.863828e-53 | -8.615850e-47 |
| Msa0004360 | Msa0863240 | 0.803233 | 3.844761e-49 | -8.615850e-47 |
| Msa0004360 | Msa0871890 | 0.801489 | 8.788992e-49 | -8.615850e-47 |
| Msa0004360 | Msa0872310 | 0.841106 | 5.809839e-58 | -8.615850e-47 |
| Msa0004360 | Msa0890250 | 0.801012 | 1.100353e-48 | -8.615850e-47 |
| Msa0004360 | Msa0903330 | 0.807632 | 4.597484e-50 | -8.615850e-47 |
| Msa0004360 | Msa0905260 | 0.812557 | 3.993175e-51 | -8.615850e-47 |
| Msa0004360 | Msa0905550 | 0.864180 | 1.464034e-64 | -8.615850e-47 |
| Msa0004360 | Msa0906370 | 0.836651 | 8.258439e-57 | -8.615850e-47 |
| Msa0004360 | Msa0922540 | 0.831346 | 1.758121e-55 | -8.615850e-47 |
| Msa0004360 | Msa0925160 | 0.819511 | 1.117440e-52 | -8.615850e-47 |
| Msa0004360 | Msa0930330 | 0.816561 | 5.190409e-52 | -8.615850e-47 |
| Msa0004360 | Msa0931480 | 0.833553 | 4.992559e-56 | -8.615850e-47 |
| Msa0004360 | Msa0931610 | 0.822371 | 2.454566e-53 | -8.615850e-47 |
| Msa0004360 | Msa0937550 | 0.866092 | 3.671515e-65 | -8.615850e-47 |
| Msa0004360 | Msa0938430 | 0.800224 | 1.593397e-48 | -8.615850e-47 |
| Msa0004360 | Msa0955260 | 0.800702 | 1.273513e-48 | -8.615850e-47 |
| Msa0004360 | Msa0958020 | 0.833863 | 4.177239e-56 | -8.615850e-47 |
| Msa0004360 | Msa0974750 | 0.843494 | 1.353721e-58 | -8.615850e-47 |
| Msa0004360 | Msa0976310 | 0.806615 | 7.546342e-50 | -8.615850e-47 |
| Msa0004360 | Msa0977320 | 0.801465 | 8.888182e-49 | -8.615850e-47 |
| Msa0004360 | Msa0990520 | 0.833838 | 4.236218e-56 | -8.615850e-47 |
| Msa0004360 | Msa1002040 | 0.822675 | 2.086269e-53 | -8.615850e-47 |
| Msa0004360 | Msa1004500 | 0.846048 | 2.774598e-59 | -8.615850e-47 |
| Msa0004360 | Msa1004520 | 0.832541 | 8.914870e-56 | -8.615850e-47 |
| Msa0004360 | Msa1007350 | 0.803569 | 3.275321e-49 | -8.615850e-47 |
| Msa0004360 | Msa1012810 | 0.804731 | 1.876865e-49 | -8.615850e-47 |
| Msa0004360 | Msa1014270 | 0.824828 | 6.531654e-54 | -8.615850e-47 |
| Msa0004360 | Msa1018790 | 0.854148 | 1.492360e-61 | -8.615850e-47 |
| Msa0004360 | Msa1027790 | 0.810788 | 9.683106e-51 | -8.615850e-47 |
| Msa0004360 | Msa1033560 | 0.827436 | 1.565880e-54 | -8.615850e-47 |
| Msa0004360 | Msa1041530 | 0.826547 | 2.555930e-54 | -8.615850e-47 |
| Msa0004360 | Msa1045880 | 0.832768 | 7.831022e-56 | -8.615850e-47 |
| Msa0004360 | Msa1045970 | 0.833218 | 6.049528e-56 | -8.615850e-47 |
| Msa0004360 | Msa1046870 | 0.831358 | 1.747138e-55 | -8.615850e-47 |
| Msa0004360 | Msa1055260 | 0.812865 | 3.419525e-51 | -8.615850e-47 |
| Msa0004360 | Msa1055280 | 0.803813 | 2.914883e-49 | -8.615850e-47 |
| Msa0004360 | Msa1055500 | 0.813633 | 2.318842e-51 | -8.615850e-47 |
| Msa0004360 | Msa1082700 | 0.806228 | 9.107985e-50 | -8.615850e-47 |
| Msa0004360 | Msa1103670 | 0.818685 | 1.723142e-52 | -8.615850e-47 |
| Msa0004360 | Msa1106810 | 0.806141 | 9.498972e-50 | -8.615850e-47 |
| Msa0004360 | Msa1112610 | 0.815277 | 1.003781e-51 | -8.615850e-47 |
| Msa0004360 | Msa1113850 | 0.800421 | 1.452423e-48 | -8.615850e-47 |
| Msa0004360 | Msa1127140 | 0.805790 | 1.126001e-49 | -8.615850e-47 |
| Msa0004360 | Msa1127950 | 0.819436 | 1.162569e-52 | -8.615850e-47 |
| Msa0004360 | Msa1134400 | 0.818049 | 2.400505e-52 | -8.615850e-47 |
| Msa0004360 | Msa1135690 | 0.807916 | 4.001579e-50 | -8.615850e-47 |
| Msa0004360 | Msa1139810 | 0.800172 | 1.632700e-48 | -8.615850e-47 |
| Msa0004360 | Msa1147270 | 0.834011 | 3.835662e-56 | -8.615850e-47 |
| Msa0004360 | Msa1150970 | 0.823511 | 1.331871e-53 | -8.615850e-47 |
| Msa0004360 | Msa1174010 | 0.809507 | 1.828962e-50 | -8.615850e-47 |
| Msa0004360 | Msa1175750 | 0.822329 | 2.511224e-53 | -8.615850e-47 |
| Msa0004360 | Msa1197110 | 0.813444 | 2.552123e-51 | -8.615850e-47 |
| Msa0004360 | Msa1200920 | 0.804383 | 2.217596e-49 | -8.615850e-47 |
| Msa0004360 | Msa1220450 | -0.808345 | 3.241757e-50 | -8.615850e-47 |
| Msa0004360 | Msa1223840 | 0.828450 | 8.932237e-55 | -8.615850e-47 |
| Msa0004360 | Msa1224670 | 0.807055 | 6.091775e-50 | -8.615850e-47 |
| Msa0004360 | Msa1226620 | 0.811210 | 7.846713e-51 | -8.615850e-47 |
| Msa0004360 | Msa1229700 | 0.819149 | 1.351578e-52 | -8.615850e-47 |
| Msa0004360 | Msa1235890 | 0.826688 | 2.365258e-54 | -8.615850e-47 |
| Msa0004360 | Msa1249870 | 0.820705 | 5.956087e-53 | -8.615850e-47 |
| Msa0004360 | Msa1250670 | 0.800263 | 1.564609e-48 | -8.615850e-47 |
| Msa0004360 | Msa1263030 | 0.813442 | 2.554887e-51 | -8.615850e-47 |
| Msa0004360 | Msa1272330 | 0.853677 | 2.040384e-61 | -8.615850e-47 |
| Msa0004360 | Msa1284520 | 0.803048 | 4.198437e-49 | -8.615850e-47 |
| Msa0004360 | Msa1307370 | 0.827795 | 1.283973e-54 | -8.615850e-47 |
| Msa0004360 | Msa1310290 | 0.808531 | 2.959262e-50 | -8.615850e-47 |
| Msa0004360 | Msa1315980 | 0.822890 | 1.859653e-53 | -8.615850e-47 |
| Msa0004360 | Msa1323060 | 0.801350 | 9.383949e-49 | -8.615850e-47 |
| Msa0004360 | Msa1337090 | 0.808931 | 2.430138e-50 | -8.615850e-47 |
| Msa0004360 | Msa1351760 | 0.804810 | 1.807028e-49 | -8.615850e-47 |
| Msa0004360 | Msa1354040 | 0.805911 | 1.061915e-49 | -8.615850e-47 |
| Msa0004360 | Msa1355400 | 0.820757 | 5.795825e-53 | -8.615850e-47 |
| Msa0004360 | Msa1365200 | 0.827814 | 1.270900e-54 | -8.615850e-47 |
| Msa0004360 | Msa1365870 | 0.814858 | 1.243477e-51 | -8.615850e-47 |
| Msa0004360 | Msa1373510 | 0.801795 | 7.606732e-49 | -8.615850e-47 |
| Msa0004360 | Msa1374440 | 0.835973 | 1.228541e-56 | -8.615850e-47 |
| Msa0004360 | Msa1379570 | 0.829682 | 4.490967e-55 | -8.615850e-47 |
| Msa0004360 | Msa1379980 | 0.807925 | 3.983205e-50 | -8.615850e-47 |
| Msa0004360 | Msa1379990 | 0.833182 | 6.178362e-56 | -8.615850e-47 |
| Msa0004360 | Msa1382310 | 0.820922 | 5.309660e-53 | -8.615850e-47 |
| Msa0004360 | Msa1390310 | 0.835949 | 1.245562e-56 | -8.615850e-47 |
| Msa0004360 | Msa1391590 | 0.802484 | 5.488635e-49 | -8.615850e-47 |
| Msa0004360 | Msa1397050 | 0.806722 | 7.166611e-50 | -8.615850e-47 |
| Msa0004360 | Msa1398480 | 0.802147 | 6.439606e-49 | -8.615850e-47 |
| Msa0004360 | Msa1420060 | 0.822849 | 1.900451e-53 | -8.615850e-47 |
| Msa0004360 | Msa1422270 | 0.831180 | 1.931322e-55 | -8.615850e-47 |
| Msa0004360 | Msa1435580 | 0.800094 | 1.693217e-48 | -8.615850e-47 |
| Msa0004360 | Msa1439120 | 0.801905 | 7.222243e-49 | -8.615850e-47 |
| Msa0004360 | Msa1447230 | 0.809985 | 1.443316e-50 | -8.615850e-47 |
| Msa0004360 | Msa1449880 | 0.819727 | 9.975438e-53 | -8.615850e-47 |
| Msa0004360 | Msa1455660 | 0.802588 | 5.225008e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004360 | MtrunA17_Chr1g0156911 | 89.809 | 314 | 7 | 2 | 1 | 290 | 46 | 358 | 0.0 | 568 |
| Msa0004360 | MtrunA17_Chr1g0156901 | 70.607 | 313 | 67 | 2 | 1 | 289 | 59 | 370 | 1.20e-165 | 464 |
| Msa0004360 | MtrunA17_Chr1g0156891 | 63.492 | 315 | 89 | 3 | 1 | 290 | 52 | 365 | 5.21e-145 | 412 |
| Msa0004360 | MtrunA17_Chr3g0142921 | 60.191 | 314 | 99 | 3 | 1 | 289 | 45 | 357 | 1.22e-133 | 382 |
| Msa0004360 | MtrunA17_Chr1g0156931 | 56.688 | 314 | 110 | 3 | 1 | 290 | 50 | 361 | 5.14e-132 | 379 |
| Msa0004360 | MtrunA17_Chr1g0156921 | 60.191 | 314 | 99 | 3 | 2 | 290 | 52 | 364 | 2.23e-131 | 377 |
| Msa0004360 | MtrunA17_Chr3g0142941 | 55.484 | 310 | 113 | 2 | 1 | 286 | 56 | 364 | 1.15e-127 | 368 |
| Msa0004360 | MtrunA17_Chr5g0405821 | 48.254 | 315 | 137 | 3 | 1 | 289 | 52 | 366 | 8.51e-102 | 302 |
| Msa0004360 | MtrunA17_Chr5g0405831 | 44.586 | 314 | 149 | 2 | 1 | 289 | 52 | 365 | 2.56e-98 | 293 |
| Msa0004360 | MtrunA17_Chr8g0371491 | 45.223 | 314 | 146 | 3 | 1 | 289 | 45 | 357 | 1.59e-96 | 288 |
| Msa0004360 | MtrunA17_Chr8g0371481 | 43.671 | 316 | 151 | 4 | 1 | 290 | 50 | 364 | 1.35e-87 | 265 |
| Msa0004360 | MtrunA17_Chr8g0371471 | 43.810 | 315 | 151 | 3 | 1 | 290 | 50 | 363 | 5.08e-87 | 264 |
| Msa0004360 | MtrunA17_Chr1g0157001 | 38.658 | 313 | 164 | 5 | 2 | 289 | 46 | 355 | 2.20e-70 | 222 |
| Msa0004360 | MtrunA17_Chr5g0438621 | 38.514 | 296 | 156 | 3 | 1 | 271 | 39 | 333 | 1.45e-69 | 219 |
| Msa0004360 | MtrunA17_Chr4g0046151 | 36.570 | 309 | 163 | 3 | 1 | 277 | 45 | 352 | 2.02e-68 | 216 |
| Msa0004360 | MtrunA17_Chr5g0432101 | 36.755 | 302 | 163 | 3 | 1 | 275 | 42 | 342 | 1.30e-65 | 209 |
| Msa0004360 | MtrunA17_Chr3g0105401 | 36.076 | 316 | 175 | 4 | 1 | 290 | 37 | 351 | 2.29e-65 | 208 |
| Msa0004360 | MtrunA17_Chr5g0438631 | 36.190 | 315 | 174 | 3 | 1 | 289 | 37 | 350 | 4.46e-65 | 207 |
| Msa0004360 | MtrunA17_Chr2g0283191 | 35.370 | 311 | 166 | 5 | 1 | 277 | 47 | 356 | 2.08e-63 | 204 |
| Msa0004360 | MtrunA17_Chr3g0120861 | 35.556 | 315 | 177 | 4 | 1 | 290 | 47 | 360 | 5.44e-63 | 202 |
| Msa0004360 | MtrunA17_Chr8g0341001 | 36.513 | 304 | 166 | 4 | 1 | 278 | 41 | 343 | 1.69e-60 | 196 |
| Msa0004360 | MtrunA17_Chr5g0438641 | 33.968 | 315 | 182 | 3 | 1 | 290 | 41 | 354 | 2.35e-59 | 193 |
| Msa0004360 | MtrunA17_Chr2g0320671 | 35.974 | 303 | 168 | 4 | 1 | 278 | 39 | 340 | 1.45e-58 | 191 |
| Msa0004360 | MtrunA17_Chr6g0463261 | 72.131 | 122 | 34 | 0 | 45 | 166 | 3 | 124 | 2.50e-58 | 182 |
| Msa0004360 | MtrunA17_Chr5g0437421 | 33.230 | 322 | 180 | 5 | 1 | 290 | 41 | 359 | 1.98e-57 | 188 |
| Msa0004360 | MtrunA17_Chr2g0330781 | 35.161 | 310 | 173 | 5 | 1 | 283 | 40 | 348 | 1.36e-56 | 186 |
| Msa0004360 | MtrunA17_Chr4g0027521 | 34.839 | 310 | 167 | 5 | 1 | 279 | 36 | 341 | 6.78e-54 | 179 |
| Msa0004360 | MtrunA17_Chr8g0380041 | 35.548 | 301 | 159 | 7 | 1 | 272 | 40 | 334 | 1.59e-50 | 170 |
| Msa0004360 | MtrunA17_Chr5g0396511 | 32.131 | 305 | 179 | 6 | 1 | 279 | 55 | 357 | 9.16e-48 | 163 |
| Msa0004360 | MtrunA17_Chr2g0285061 | 33.000 | 300 | 169 | 8 | 1 | 272 | 41 | 336 | 3.09e-47 | 162 |
| Msa0004360 | MtrunA17_Chr8g0374101 | 32.484 | 314 | 178 | 7 | 1 | 282 | 46 | 357 | 7.36e-46 | 158 |
| Msa0004360 | MtrunA17_Chr3g0086641 | 33.224 | 304 | 172 | 8 | 1 | 277 | 47 | 346 | 1.71e-45 | 157 |
| Msa0004360 | MtrunA17_Chr3g0077571 | 34.680 | 297 | 165 | 8 | 1 | 273 | 39 | 330 | 3.14e-45 | 156 |
| Msa0004360 | MtrunA17_Chr1g0182811 | 32.131 | 305 | 179 | 5 | 1 | 278 | 42 | 345 | 1.12e-43 | 152 |
| Msa0004360 | MtrunA17_Chr4g0017431 | 33.000 | 300 | 171 | 6 | 1 | 273 | 40 | 336 | 4.87e-42 | 148 |
| Msa0004360 | MtrunA17_Chr3g0077581 | 31.562 | 320 | 180 | 9 | 1 | 287 | 45 | 358 | 6.40e-42 | 148 |
| Msa0004360 | MtrunA17_Chr6g0457921 | 31.250 | 304 | 182 | 4 | 1 | 278 | 38 | 340 | 9.16e-42 | 147 |
| Msa0004360 | MtrunA17_Chr1g0189901 | 30.693 | 303 | 182 | 5 | 2 | 278 | 41 | 341 | 3.91e-41 | 145 |
| Msa0004360 | MtrunA17_Chr3g0131321 | 30.945 | 307 | 183 | 5 | 1 | 279 | 43 | 348 | 1.27e-40 | 145 |
| Msa0004360 | MtrunA17_Chr5g0434621 | 32.450 | 302 | 176 | 7 | 2 | 278 | 35 | 333 | 1.40e-40 | 144 |
| Msa0004360 | MtrunA17_Chr7g0275021 | 31.250 | 304 | 181 | 6 | 1 | 278 | 43 | 344 | 1.42e-40 | 144 |
| Msa0004360 | MtrunA17_Chr7g0275011 | 30.921 | 304 | 182 | 5 | 1 | 278 | 43 | 344 | 1.70e-40 | 144 |
| Msa0004360 | MtrunA17_Chr7g0275001 | 30.915 | 317 | 187 | 6 | 1 | 287 | 34 | 348 | 3.04e-38 | 138 |
| Msa0004360 | MtrunA17_Chr4g0008851 | 30.719 | 306 | 182 | 8 | 1 | 278 | 41 | 344 | 2.06e-37 | 136 |
| Msa0004360 | MtrunA17_Chr3g0099151 | 31.922 | 307 | 178 | 8 | 1 | 278 | 96 | 400 | 3.58e-37 | 136 |
| Msa0004360 | MtrunA17_Chr7g0274991 | 29.605 | 304 | 186 | 5 | 1 | 278 | 42 | 343 | 5.73e-37 | 135 |
| Msa0004360 | MtrunA17_Chr1g0189931 | 31.023 | 303 | 181 | 6 | 2 | 278 | 42 | 342 | 1.01e-36 | 134 |
| Msa0004360 | MtrunA17_Chr1g0189891 | 31.148 | 305 | 175 | 7 | 1 | 278 | 38 | 334 | 1.37e-36 | 134 |
| Msa0004360 | MtrunA17_Chr2g0294301 | 31.190 | 311 | 171 | 6 | 1 | 277 | 44 | 345 | 3.21e-36 | 132 |
| Msa0004360 | MtrunA17_Chr4g0027571 | 33.654 | 208 | 113 | 3 | 96 | 278 | 3 | 210 | 8.04e-36 | 128 |
| Msa0004360 | MtrunA17_Chr4g0060811 | 28.710 | 310 | 193 | 7 | 2 | 285 | 37 | 344 | 1.22e-35 | 131 |
| Msa0004360 | MtrunA17_Chr2g0284941 | 33.681 | 288 | 167 | 11 | 2 | 279 | 43 | 316 | 2.76e-35 | 130 |
| Msa0004360 | MtrunA17_Chr3g0092131 | 28.710 | 310 | 193 | 7 | 2 | 285 | 33 | 340 | 5.49e-35 | 129 |
| Msa0004360 | MtrunA17_Chr3g0099161 | 30.719 | 306 | 182 | 6 | 1 | 278 | 101 | 404 | 1.61e-34 | 129 |
| Msa0004360 | MtrunA17_Chr2g0284991 | 32.000 | 300 | 163 | 12 | 2 | 272 | 43 | 330 | 4.16e-34 | 127 |
| Msa0004360 | MtrunA17_Chr4g0068441 | 30.449 | 312 | 181 | 9 | 1 | 282 | 44 | 349 | 7.73e-34 | 126 |
| Msa0004360 | MtrunA17_Chr2g0284951 | 32.441 | 299 | 159 | 12 | 2 | 272 | 43 | 326 | 1.66e-33 | 125 |
| Msa0004360 | MtrunA17_Chr2g0285001 | 31.392 | 309 | 171 | 13 | 2 | 281 | 43 | 339 | 1.75e-33 | 125 |
| Msa0004360 | MtrunA17_Chr3g0085881 | 28.763 | 299 | 176 | 9 | 2 | 276 | 43 | 328 | 1.37e-32 | 123 |
| Msa0004360 | MtrunA17_Chr2g0294311 | 29.904 | 311 | 175 | 8 | 1 | 273 | 41 | 346 | 8.50e-32 | 121 |
| Msa0004360 | MtrunA17_Chr8g0380031 | 28.664 | 307 | 178 | 8 | 2 | 281 | 94 | 386 | 9.33e-32 | 121 |
| Msa0004360 | MtrunA17_Chr2g0284921 | 28.889 | 315 | 184 | 9 | 2 | 288 | 44 | 346 | 3.04e-31 | 119 |
| Msa0004360 | MtrunA17_Chr7g0215961 | 26.974 | 304 | 181 | 6 | 1 | 278 | 42 | 330 | 7.93e-31 | 118 |
| Msa0004360 | MtrunA17_Chr5g0444401 | 29.085 | 306 | 187 | 7 | 1 | 278 | 37 | 340 | 4.97e-30 | 116 |
| Msa0004360 | MtrunA17_Chr3g0099231 | 29.967 | 307 | 182 | 9 | 1 | 278 | 37 | 339 | 1.33e-29 | 115 |
| Msa0004360 | MtrunA17_Chr7g0229591 | 38.415 | 164 | 100 | 1 | 1 | 164 | 39 | 201 | 3.80e-29 | 110 |
| Msa0004360 | MtrunA17_Chr2g0301641 | 28.526 | 312 | 175 | 9 | 1 | 275 | 52 | 352 | 7.66e-28 | 110 |
| Msa0004360 | MtrunA17_Chr8g0349341 | 27.393 | 303 | 186 | 9 | 2 | 277 | 47 | 342 | 8.44e-28 | 110 |
| Msa0004360 | MtrunA17_Chr7g0229581 | 43.396 | 106 | 59 | 1 | 174 | 278 | 38 | 143 | 3.44e-27 | 103 |
| Msa0004360 | MtrunA17_Chr5g0420811 | 29.097 | 299 | 179 | 13 | 1 | 276 | 42 | 330 | 6.30e-27 | 107 |
| Msa0004360 | MtrunA17_Chr8g0344941 | 28.754 | 313 | 180 | 14 | 1 | 279 | 50 | 353 | 4.66e-25 | 103 |
| Msa0004360 | MtrunA17_Chr8g0349331 | 28.169 | 284 | 180 | 6 | 1 | 277 | 44 | 310 | 6.44e-25 | 102 |
| Msa0004360 | MtrunA17_Chr4g0018571 | 40.179 | 112 | 66 | 1 | 168 | 278 | 55 | 166 | 3.87e-24 | 96.3 |
| Msa0004360 | MtrunA17_Chr1g0160011 | 28.197 | 305 | 167 | 10 | 19 | 277 | 64 | 362 | 1.56e-22 | 96.3 |
| Msa0004360 | MtrunA17_Chr3g0104821 | 29.283 | 321 | 176 | 14 | 2 | 278 | 54 | 367 | 2.69e-21 | 92.8 |
| Msa0004360 | MtrunA17_Chr2g0283511 | 27.469 | 324 | 179 | 14 | 2 | 278 | 41 | 355 | 2.94e-21 | 92.4 |
| Msa0004360 | MtrunA17_Chr8g0349301 | 26.740 | 273 | 164 | 8 | 1 | 248 | 46 | 307 | 4.35e-21 | 91.3 |
| Msa0004360 | MtrunA17_Chr3g0112821 | 26.518 | 313 | 181 | 10 | 2 | 275 | 40 | 342 | 4.38e-21 | 91.7 |
| Msa0004360 | MtrunA17_Chr1g0160031 | 27.036 | 307 | 172 | 11 | 19 | 279 | 63 | 363 | 9.30e-21 | 91.3 |
| Msa0004360 | MtrunA17_Chr8g0344931 | 25.649 | 308 | 187 | 8 | 2 | 280 | 47 | 341 | 1.04e-20 | 90.9 |
| Msa0004360 | MtrunA17_Chr2g0283481 | 25.545 | 321 | 187 | 11 | 2 | 278 | 57 | 369 | 1.84e-20 | 90.5 |
| Msa0004360 | MtrunA17_Chr1g0159991 | 26.531 | 294 | 166 | 9 | 31 | 277 | 70 | 360 | 7.25e-20 | 88.6 |
| Msa0004360 | MtrunA17_Chr3g0085231 | 27.451 | 306 | 174 | 10 | 1 | 276 | 40 | 327 | 3.29e-19 | 86.3 |
| Msa0004360 | MtrunA17_Chr3g0093031 | 26.207 | 290 | 162 | 10 | 30 | 275 | 66 | 347 | 7.10e-19 | 85.5 |
| Msa0004360 | MtrunA17_Chr6g0469511 | 43.137 | 102 | 57 | 1 | 1 | 102 | 39 | 139 | 1.58e-18 | 80.1 |
| Msa0004360 | MtrunA17_Chr4g0057991 | 26.647 | 334 | 172 | 12 | 2 | 283 | 49 | 361 | 1.78e-18 | 84.7 |
| Msa0004360 | MtrunA17_Chr7g0226941 | 27.063 | 303 | 168 | 9 | 19 | 273 | 57 | 354 | 2.96e-18 | 84.0 |
| Msa0004360 | MtrunA17_Chr2g0317271 | 27.215 | 316 | 174 | 14 | 2 | 278 | 40 | 338 | 3.50e-18 | 83.6 |
| Msa0004360 | MtrunA17_Chr2g0317261 | 27.215 | 316 | 174 | 14 | 2 | 278 | 40 | 338 | 5.16e-18 | 83.2 |
| Msa0004360 | MtrunA17_Chr4g0027561 | 48.235 | 85 | 43 | 1 | 1 | 85 | 39 | 122 | 3.13e-17 | 77.0 |
| Msa0004360 | MtrunA17_Chr2g0301541 | 27.586 | 290 | 146 | 13 | 30 | 275 | 68 | 337 | 5.93e-17 | 80.1 |
| Msa0004360 | MtrunA17_Chr0c01g0489581 | 26.582 | 316 | 176 | 14 | 2 | 278 | 40 | 338 | 8.93e-17 | 79.3 |
| Msa0004360 | MtrunA17_Chr0c01g0489571 | 26.582 | 316 | 176 | 14 | 2 | 278 | 40 | 338 | 1.53e-16 | 79.0 |
| Msa0004360 | MtrunA17_Chr2g0301581 | 25.862 | 290 | 151 | 11 | 30 | 275 | 68 | 337 | 1.81e-16 | 78.6 |
| Msa0004360 | MtrunA17_Chr4g0027581 | 32.836 | 134 | 67 | 2 | 168 | 278 | 50 | 183 | 9.22e-16 | 74.3 |
| Msa0004360 | MtrunA17_Chr1g0159981 | 25.510 | 294 | 169 | 10 | 31 | 277 | 80 | 370 | 1.09e-15 | 76.6 |
| Msa0004360 | MtrunA17_Chr1g0159971 | 26.518 | 313 | 166 | 13 | 18 | 277 | 70 | 371 | 1.29e-15 | 76.3 |
| Msa0004360 | MtrunA17_Chr8g0370981 | 24.100 | 361 | 183 | 14 | 2 | 283 | 54 | 402 | 3.05e-15 | 75.5 |
| Msa0004360 | MtrunA17_Chr1g0178931 | 24.000 | 325 | 189 | 14 | 1 | 290 | 46 | 347 | 8.38e-15 | 73.6 |
| Msa0004360 | MtrunA17_Chr6g0469521 | 35.052 | 97 | 62 | 1 | 168 | 263 | 56 | 152 | 1.08e-14 | 70.1 |
| Msa0004360 | MtrunA17_Chr5g0440501 | 36.275 | 102 | 65 | 0 | 177 | 278 | 126 | 227 | 1.09e-14 | 72.4 |
| Msa0004360 | MtrunA17_Chr6g0450731 | 22.483 | 298 | 189 | 7 | 15 | 278 | 53 | 342 | 1.76e-14 | 72.8 |
| Msa0004360 | MtrunA17_Chr1g0160101 | 24.595 | 309 | 176 | 12 | 19 | 277 | 66 | 367 | 2.16e-14 | 72.8 |
| Msa0004360 | MtrunA17_Chr8g0347751 | 24.051 | 316 | 172 | 11 | 19 | 278 | 60 | 363 | 2.61e-14 | 72.4 |
| Msa0004360 | MtrunA17_Chr5g0432081 | 54.902 | 51 | 23 | 0 | 228 | 278 | 10 | 60 | 3.62e-14 | 66.6 |
| Msa0004360 | MtrunA17_Chr7g0275291 | 23.986 | 296 | 173 | 10 | 30 | 278 | 66 | 356 | 5.04e-14 | 71.6 |
| Msa0004360 | MtrunA17_Chr1g0189921 | 48.718 | 78 | 38 | 2 | 2 | 79 | 41 | 116 | 1.42e-13 | 67.0 |
| Msa0004360 | MtrunA17_Chr2g0321991 | 46.250 | 80 | 40 | 3 | 1 | 79 | 42 | 119 | 7.46e-13 | 64.3 |
| Msa0004360 | MtrunA17_Chr6g0455661 | 33.019 | 106 | 70 | 1 | 174 | 279 | 348 | 452 | 2.08e-12 | 67.0 |
| Msa0004360 | MtrunA17_Chr6g0455661 | 46.067 | 89 | 43 | 3 | 1 | 89 | 40 | 123 | 3.10e-12 | 66.6 |
| Msa0004360 | MtrunA17_Chr8g0370961 | 23.853 | 218 | 142 | 6 | 87 | 282 | 11 | 226 | 3.00e-12 | 65.1 |
| Msa0004360 | MtrunA17_Chr7g0266061 | 24.262 | 305 | 173 | 14 | 19 | 284 | 67 | 352 | 3.45e-12 | 66.2 |
| Msa0004360 | MtrunA17_Chr3g0096551 | 24.478 | 335 | 177 | 13 | 2 | 275 | 39 | 358 | 3.60e-12 | 66.2 |
| Msa0004360 | MtrunA17_Chr6g0459921 | 26.147 | 218 | 129 | 5 | 91 | 279 | 127 | 341 | 4.34e-12 | 65.9 |
| Msa0004360 | MtrunA17_Chr2g0301571 | 25.540 | 278 | 143 | 12 | 42 | 275 | 36 | 293 | 6.63e-12 | 65.1 |
| Msa0004360 | MtrunA17_Chr7g0228261 | 42.029 | 69 | 40 | 0 | 218 | 286 | 10 | 78 | 6.70e-12 | 60.8 |
| Msa0004360 | MtrunA17_Chr3g0104831 | 30.909 | 110 | 68 | 3 | 177 | 278 | 177 | 286 | 2.10e-11 | 63.5 |
| Msa0004360 | MtrunA17_Chr2g0301551 | 24.101 | 278 | 147 | 11 | 42 | 275 | 36 | 293 | 5.67e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0004360 | AT1G75900.1 | 46.667 | 315 | 141 | 4 | 1 | 290 | 52 | 364 | 3.92e-102 | 303 |
| Msa0004360 | AT1G75880.2 | 47.771 | 314 | 138 | 3 | 1 | 289 | 61 | 373 | 1.43e-101 | 302 |
| Msa0004360 | AT1G75880.1 | 47.619 | 315 | 138 | 4 | 1 | 289 | 61 | 374 | 1.11e-99 | 297 |
| Msa0004360 | AT1G75890.2 | 45.192 | 312 | 144 | 4 | 1 | 286 | 56 | 366 | 6.49e-98 | 292 |
| Msa0004360 | AT1G75890.3 | 45.192 | 312 | 144 | 4 | 1 | 286 | 85 | 395 | 1.23e-97 | 293 |
| Msa0004360 | AT5G42170.1 | 45.079 | 315 | 144 | 4 | 1 | 290 | 59 | 369 | 3.49e-97 | 290 |
| Msa0004360 | AT3G14820.1 | 46.774 | 310 | 135 | 5 | 1 | 285 | 41 | 345 | 4.40e-96 | 287 |
| Msa0004360 | AT1G75890.1 | 43.385 | 325 | 144 | 5 | 1 | 286 | 56 | 379 | 3.60e-94 | 283 |
| Msa0004360 | AT1G59406.1 | 45.192 | 312 | 140 | 6 | 1 | 286 | 39 | 345 | 9.77e-89 | 268 |
| Msa0004360 | AT1G59030.1 | 45.192 | 312 | 140 | 6 | 1 | 286 | 39 | 345 | 9.77e-89 | 268 |
| Msa0004360 | AT1G58725.1 | 45.192 | 312 | 140 | 6 | 1 | 286 | 39 | 345 | 9.77e-89 | 268 |
| Msa0004360 | AT3G43570.1 | 43.919 | 296 | 138 | 6 | 1 | 286 | 39 | 316 | 4.63e-81 | 248 |
| Msa0004360 | AT1G20120.1 | 40.895 | 313 | 155 | 4 | 1 | 288 | 87 | 394 | 6.98e-81 | 250 |
| Msa0004360 | AT1G20132.1 | 41.720 | 314 | 157 | 3 | 1 | 289 | 70 | 382 | 1.00e-80 | 249 |
| Msa0004360 | AT1G58520.3 | 42.628 | 312 | 141 | 7 | 1 | 286 | 39 | 338 | 5.46e-79 | 243 |
| Msa0004360 | AT1G58525.1 | 42.628 | 312 | 141 | 7 | 1 | 286 | 39 | 338 | 5.46e-79 | 243 |
| Msa0004360 | AT2G31540.1 | 40.000 | 305 | 153 | 6 | 1 | 277 | 44 | 346 | 5.93e-71 | 223 |
| Msa0004360 | AT2G04570.1 | 38.284 | 303 | 161 | 4 | 1 | 278 | 37 | 338 | 2.59e-69 | 219 |
| Msa0004360 | AT1G73610.1 | 39.799 | 299 | 149 | 6 | 1 | 278 | 44 | 332 | 7.31e-69 | 217 |
| Msa0004360 | AT2G40250.1 | 37.460 | 315 | 163 | 6 | 1 | 284 | 45 | 356 | 5.08e-67 | 213 |
| Msa0004360 | AT2G30310.1 | 37.855 | 317 | 160 | 6 | 1 | 290 | 43 | 349 | 1.01e-66 | 212 |
| Msa0004360 | AT5G03810.1 | 38.158 | 304 | 161 | 4 | 1 | 278 | 39 | 341 | 1.22e-66 | 212 |
| Msa0004360 | AT2G30220.1 | 38.284 | 303 | 159 | 6 | 2 | 277 | 43 | 344 | 5.41e-65 | 208 |
| Msa0004360 | AT1G06990.1 | 34.494 | 316 | 179 | 4 | 1 | 290 | 46 | 359 | 1.07e-64 | 207 |
| Msa0004360 | AT5G63170.1 | 37.374 | 297 | 152 | 5 | 1 | 274 | 37 | 322 | 6.42e-64 | 204 |
| Msa0004360 | AT1G58430.1 | 38.742 | 302 | 155 | 6 | 1 | 274 | 44 | 343 | 9.79e-64 | 204 |
| Msa0004360 | AT2G24560.1 | 37.209 | 301 | 161 | 5 | 1 | 274 | 43 | 342 | 1.25e-63 | 204 |
| Msa0004360 | AT3G43550.1 | 43.874 | 253 | 112 | 5 | 1 | 228 | 39 | 286 | 4.78e-62 | 198 |
| Msa0004360 | AT5G45960.1 | 36.304 | 303 | 163 | 5 | 1 | 274 | 56 | 357 | 1.40e-61 | 199 |
| Msa0004360 | AT1G20130.2 | 35.849 | 318 | 171 | 4 | 2 | 287 | 194 | 510 | 2.80e-61 | 202 |
| Msa0004360 | AT1G20130.1 | 35.849 | 318 | 171 | 4 | 2 | 287 | 214 | 530 | 4.78e-61 | 202 |
| Msa0004360 | AT5G03820.1 | 36.066 | 305 | 167 | 4 | 1 | 278 | 42 | 345 | 1.65e-60 | 196 |
| Msa0004360 | AT5G03820.2 | 36.066 | 305 | 167 | 4 | 1 | 278 | 70 | 373 | 6.25e-60 | 196 |
| Msa0004360 | AT4G26790.1 | 34.516 | 310 | 176 | 4 | 1 | 285 | 38 | 345 | 7.14e-60 | 194 |
| Msa0004360 | AT4G26790.2 | 34.516 | 310 | 176 | 4 | 1 | 285 | 38 | 345 | 7.14e-60 | 194 |
| Msa0004360 | AT3G16370.1 | 36.184 | 304 | 167 | 4 | 1 | 278 | 39 | 341 | 3.35e-59 | 192 |
| Msa0004360 | AT2G42990.1 | 35.430 | 302 | 169 | 3 | 1 | 277 | 37 | 337 | 4.09e-59 | 192 |
| Msa0004360 | AT1G23500.1 | 38.333 | 300 | 145 | 6 | 1 | 274 | 44 | 329 | 4.14e-58 | 189 |
| Msa0004360 | AT5G22810.1 | 35.621 | 306 | 168 | 4 | 1 | 278 | 43 | 347 | 3.35e-57 | 187 |
| Msa0004360 | AT1G20135.1 | 34.211 | 304 | 160 | 7 | 1 | 278 | 38 | 327 | 1.80e-54 | 180 |
| Msa0004360 | AT1G75920.2 | 37.624 | 303 | 153 | 6 | 1 | 277 | 38 | 330 | 4.18e-54 | 179 |
| Msa0004360 | AT3G53100.1 | 33.119 | 311 | 182 | 3 | 1 | 286 | 38 | 347 | 3.87e-53 | 177 |
| Msa0004360 | AT1G75920.4 | 36.735 | 294 | 150 | 6 | 11 | 278 | 20 | 303 | 9.21e-51 | 170 |
| Msa0004360 | AT1G75920.1 | 35.849 | 318 | 153 | 7 | 1 | 277 | 33 | 340 | 3.76e-50 | 169 |
| Msa0004360 | AT1G29670.1 | 34.416 | 308 | 170 | 7 | 1 | 281 | 41 | 343 | 2.61e-47 | 162 |
| Msa0004360 | AT1G29670.2 | 34.416 | 308 | 170 | 7 | 1 | 281 | 109 | 411 | 1.49e-46 | 162 |
| Msa0004360 | AT5G45950.1 | 32.484 | 314 | 182 | 7 | 1 | 290 | 49 | 356 | 1.84e-46 | 160 |
| Msa0004360 | AT1G75910.1 | 34.211 | 304 | 163 | 6 | 1 | 277 | 37 | 330 | 2.35e-46 | 159 |
| Msa0004360 | AT4G18970.1 | 32.484 | 314 | 176 | 8 | 1 | 284 | 37 | 344 | 3.17e-45 | 157 |
| Msa0004360 | AT4G18970.2 | 32.484 | 314 | 176 | 8 | 1 | 284 | 37 | 344 | 7.92e-45 | 157 |
| Msa0004360 | AT3G50400.1 | 31.529 | 314 | 182 | 9 | 1 | 282 | 43 | 355 | 2.86e-44 | 154 |
| Msa0004360 | AT1G33811.1 | 32.484 | 314 | 174 | 11 | 1 | 281 | 43 | 351 | 4.89e-44 | 154 |
| Msa0004360 | AT2G23540.1 | 30.645 | 310 | 182 | 7 | 1 | 278 | 57 | 365 | 8.05e-44 | 154 |
| Msa0004360 | AT5G45670.1 | 32.372 | 312 | 179 | 8 | 1 | 284 | 38 | 345 | 8.07e-44 | 153 |
| Msa0004360 | AT1G29660.1 | 32.362 | 309 | 176 | 8 | 1 | 281 | 41 | 344 | 3.00e-43 | 151 |
| Msa0004360 | AT1G71691.2 | 34.211 | 304 | 168 | 10 | 1 | 278 | 64 | 361 | 2.10e-42 | 150 |
| Msa0004360 | AT5G08460.1 | 32.797 | 311 | 174 | 9 | 1 | 280 | 58 | 364 | 1.70e-41 | 147 |
| Msa0004360 | AT2G31550.1 | 35.122 | 205 | 107 | 3 | 99 | 277 | 1 | 205 | 2.53e-40 | 140 |
| Msa0004360 | AT4G28780.1 | 29.276 | 304 | 187 | 6 | 1 | 278 | 40 | 341 | 3.03e-40 | 144 |
| Msa0004360 | AT5G33370.1 | 30.592 | 304 | 183 | 5 | 1 | 278 | 39 | 340 | 6.45e-40 | 143 |
| Msa0004360 | AT5G18430.1 | 30.164 | 305 | 185 | 4 | 1 | 278 | 37 | 340 | 1.23e-39 | 142 |
| Msa0004360 | AT2G24560.2 | 34.118 | 255 | 140 | 5 | 1 | 228 | 43 | 296 | 2.99e-39 | 140 |
| Msa0004360 | AT4G10950.2 | 28.947 | 304 | 188 | 6 | 1 | 278 | 80 | 381 | 5.21e-39 | 141 |
| Msa0004360 | AT5G15720.1 | 32.911 | 316 | 174 | 10 | 1 | 284 | 39 | 348 | 5.66e-39 | 140 |
| Msa0004360 | AT1G71250.1 | 31.475 | 305 | 179 | 7 | 1 | 278 | 50 | 351 | 1.22e-37 | 137 |
| Msa0004360 | AT5G37690.1 | 30.464 | 302 | 182 | 9 | 2 | 278 | 37 | 335 | 2.40e-37 | 136 |
| Msa0004360 | AT3G04290.1 | 30.263 | 304 | 184 | 5 | 1 | 278 | 38 | 339 | 3.68e-37 | 135 |
| Msa0004360 | AT1G75920.3 | 32.013 | 303 | 139 | 7 | 1 | 277 | 38 | 299 | 2.64e-36 | 132 |
| Msa0004360 | AT4G10950.1 | 28.947 | 304 | 184 | 7 | 1 | 278 | 80 | 377 | 3.01e-36 | 134 |
| Msa0004360 | AT5G55050.1 | 31.230 | 317 | 177 | 10 | 1 | 282 | 48 | 358 | 6.96e-35 | 130 |
| Msa0004360 | AT2G19010.1 | 32.166 | 314 | 167 | 13 | 2 | 286 | 40 | 336 | 6.98e-35 | 129 |
| Msa0004360 | AT2G19010.2 | 32.166 | 314 | 167 | 13 | 2 | 286 | 70 | 366 | 1.24e-34 | 129 |
| Msa0004360 | AT5G41890.1 | 30.769 | 325 | 174 | 12 | 1 | 282 | 40 | 356 | 2.35e-34 | 128 |
| Msa0004360 | AT2G19060.1 | 32.278 | 316 | 166 | 12 | 2 | 286 | 40 | 338 | 8.05e-34 | 126 |
| Msa0004360 | AT2G19050.1 | 30.693 | 303 | 170 | 10 | 2 | 278 | 41 | 329 | 1.37e-33 | 125 |
| Msa0004360 | AT5G37690.2 | 29.470 | 302 | 177 | 10 | 2 | 278 | 37 | 327 | 2.96e-32 | 122 |
| Msa0004360 | AT1G74460.1 | 26.129 | 310 | 201 | 7 | 2 | 285 | 33 | 340 | 5.32e-31 | 119 |
| Msa0004360 | AT1G75930.1 | 31.148 | 305 | 170 | 8 | 1 | 277 | 38 | 330 | 7.58e-31 | 118 |
| Msa0004360 | AT1G71691.1 | 31.679 | 262 | 149 | 9 | 43 | 278 | 3 | 260 | 1.69e-30 | 116 |
| Msa0004360 | AT2G03980.2 | 31.153 | 321 | 182 | 14 | 1 | 290 | 52 | 364 | 3.31e-27 | 108 |
| Msa0004360 | AT2G03980.3 | 31.153 | 321 | 182 | 14 | 1 | 290 | 52 | 364 | 3.31e-27 | 108 |
| Msa0004360 | AT2G03980.1 | 31.153 | 321 | 182 | 14 | 1 | 290 | 52 | 364 | 3.31e-27 | 108 |
| Msa0004360 | AT2G03980.4 | 31.153 | 321 | 182 | 14 | 1 | 290 | 52 | 364 | 3.31e-27 | 108 |
| Msa0004360 | AT1G53920.1 | 26.129 | 310 | 181 | 11 | 1 | 274 | 57 | 354 | 6.45e-27 | 108 |
| Msa0004360 | AT5G15720.3 | 30.798 | 263 | 148 | 8 | 54 | 284 | 57 | 317 | 4.47e-26 | 105 |
| Msa0004360 | AT4G30140.1 | 28.053 | 303 | 176 | 9 | 2 | 278 | 43 | 329 | 2.32e-25 | 103 |
| Msa0004360 | AT5G33370.2 | 29.134 | 254 | 152 | 5 | 1 | 228 | 39 | 290 | 1.05e-24 | 101 |
| Msa0004360 | AT1G71691.3 | 31.890 | 254 | 141 | 10 | 1 | 228 | 64 | 311 | 9.54e-24 | 98.6 |
| Msa0004360 | AT2G19050.2 | 30.417 | 240 | 131 | 8 | 2 | 215 | 41 | 270 | 4.48e-23 | 96.3 |
| Msa0004360 | AT5G40990.1 | 26.415 | 318 | 184 | 13 | 2 | 280 | 47 | 353 | 1.31e-21 | 94.0 |
| Msa0004360 | AT5G15720.2 | 31.538 | 260 | 140 | 10 | 1 | 228 | 39 | 292 | 1.59e-21 | 92.8 |
| Msa0004360 | AT4G16230.1 | 37.857 | 140 | 83 | 2 | 1 | 139 | 39 | 175 | 3.68e-21 | 90.5 |
| Msa0004360 | AT1G54790.3 | 22.848 | 302 | 183 | 8 | 18 | 273 | 56 | 353 | 1.03e-20 | 91.3 |
| Msa0004360 | AT1G53940.2 | 25.309 | 324 | 180 | 10 | 2 | 280 | 49 | 355 | 2.02e-19 | 87.8 |
| Msa0004360 | AT5G14450.1 | 26.923 | 312 | 175 | 9 | 19 | 282 | 65 | 371 | 2.49e-19 | 87.4 |
| Msa0004360 | AT2G04020.1 | 38.961 | 154 | 72 | 7 | 1 | 144 | 52 | 193 | 4.27e-19 | 85.1 |
| Msa0004360 | AT2G04020.2 | 38.961 | 154 | 72 | 7 | 1 | 144 | 52 | 193 | 9.03e-19 | 85.1 |
| Msa0004360 | AT3G48460.1 | 25.868 | 317 | 196 | 14 | 2 | 282 | 48 | 361 | 1.23e-18 | 85.5 |
| Msa0004360 | AT1G54790.1 | 22.300 | 287 | 175 | 7 | 33 | 273 | 68 | 352 | 3.17e-17 | 81.3 |
| Msa0004360 | AT4G16233.1 | 35.185 | 108 | 68 | 2 | 176 | 282 | 5 | 111 | 3.63e-16 | 73.9 |
| Msa0004360 | AT5G03610.1 | 25.240 | 313 | 180 | 11 | 2 | 277 | 53 | 348 | 1.19e-14 | 73.6 |
Find 65 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATATCTTCCAGCATATT+TGG | 0.150743 | 1_1:+6846474 | Msa0004360:CDS |
| ACTTGGAAAATTCTGCTTAA+AGG | 0.193594 | 1_1:-6847792 | None:intergenic |
| ATTCTTTGAATAATTCTATC+TGG | 0.217150 | 1_1:-6846832 | None:intergenic |
| TGGCCTGTTGTTGTTATTTC+CGG | 0.241645 | 1_1:-6846222 | None:intergenic |
| AAGTAGCAGGATTGTTTATA+TGG | 0.252807 | 1_1:+6847811 | Msa0004360:CDS |
| TTTCCAGCAGTGTTTGTATT+TGG | 0.284628 | 1_1:+6846182 | Msa0004360:intron |
| ACGACTCGGATTATGTGTTT+TGG | 0.299162 | 1_1:+6849034 | Msa0004360:CDS |
| TTACTATCAGTTGAAGAATT+AGG | 0.313281 | 1_1:+6846445 | Msa0004360:intron |
| ACCGGTGTCAACTTTGCTTC+CGG | 0.324478 | 1_1:+6846526 | Msa0004360:CDS |
| TACGGGTCTTAAGAATCCTT+TGG | 0.326151 | 1_1:-6845579 | None:intergenic |
| AATTCACTAGGCTGAAGATT+TGG | 0.343354 | 1_1:-6846499 | None:intergenic |
| TTACAACGATATCAAGTATA+GGG | 0.370204 | 1_1:-6847844 | None:intergenic |
| CAGCCTAGTGAATTGGTTAC+CGG | 0.373888 | 1_1:+6846508 | Msa0004360:CDS |
| ACATCATATAACAGTACATT+TGG | 0.377653 | 1_1:-6849272 | None:intergenic |
| AAATGTATTTCTGTAGACTT+AGG | 0.380055 | 1_1:-6849101 | None:intergenic |
| TATAAGCTGAGTCTACTAAA+AGG | 0.388730 | 1_1:-6847012 | None:intergenic |
| AAATCTTCAGCCTAGTGAAT+TGG | 0.390537 | 1_1:+6846501 | Msa0004360:CDS |
| CGCCTGTGCCACAGCACCCT+CGG | 0.404574 | 1_1:-6848963 | None:intergenic |
| ACGGGTCTTAAGAATCCTTT+GGG | 0.414320 | 1_1:-6845578 | None:intergenic |
| AACTTTGCTTCCGGTGGTGC+AGG | 0.415189 | 1_1:+6846535 | Msa0004360:CDS |
| TAGCACAAAATAAATACTAT+TGG | 0.418137 | 1_1:-6846909 | None:intergenic |
| GCTTGAAAATCTTTGCCATA+TGG | 0.425758 | 1_1:-6846269 | None:intergenic |
| TTTACAACGATATCAAGTAT+AGG | 0.431490 | 1_1:-6847845 | None:intergenic |
| TTCATACACACAACTCTCTC+TGG | 0.432556 | 1_1:+6845516 | None:intergenic |
| ATATAAACAATCCTGCTACT+TGG | 0.437775 | 1_1:-6847809 | None:intergenic |
| AAGGTTCCAGCAGATCTTAT+AGG | 0.461354 | 1_1:+6846326 | Msa0004360:CDS |
| GACCGAGGGTGCTGTGGCAC+AGG | 0.468131 | 1_1:+6848961 | Msa0004360:CDS |
| CAAGCTGGAGGAATTCCAAC+TGG | 0.470974 | 1_1:+6846287 | Msa0004360:CDS |
| TTCTTTGAATAATTCTATCT+GGG | 0.473576 | 1_1:-6846831 | None:intergenic |
| ATCTGAGAAGATTAAAATCA+AGG | 0.478036 | 1_1:+6845549 | Msa0004360:five_prime_UTR |
| ATCCGAGTCGTTGGCACAAG+TGG | 0.479341 | 1_1:-6849022 | None:intergenic |
| AATGTATTTCTGTAGACTTA+GGG | 0.480144 | 1_1:-6849100 | None:intergenic |
| CAGTGCAAATTCCCTCCATA+TGG | 0.481728 | 1_1:+6846254 | Msa0004360:CDS |
| ATAGTACCTATAAGATCTGC+TGG | 0.491106 | 1_1:-6846332 | None:intergenic |
| ATACCGGAAATAACAACAAC+AGG | 0.497152 | 1_1:+6846219 | Msa0004360:CDS |
| AGTACATTTGGATGGAATCA+AGG | 0.501192 | 1_1:-6849260 | None:intergenic |
| GGAGATTCAATCATGGATAC+CGG | 0.508350 | 1_1:+6846203 | Msa0004360:exon |
| TGTATTTGGAGATTCAATCA+TGG | 0.510260 | 1_1:+6846196 | Msa0004360:exon |
| CTCAGCTTATAATTTCTACA+AGG | 0.522865 | 1_1:+6847024 | Msa0004360:CDS |
| TGGCACAAGTGGGTTCCAAA+TGG | 0.524285 | 1_1:-6849011 | None:intergenic |
| CCATTGCTAAATCTTCCAGT+TGG | 0.534561 | 1_1:-6846302 | None:intergenic |
| AATTTGCACTGAGTTGGTGT+TGG | 0.536542 | 1_1:-6846242 | None:intergenic |
| AGATTTGGATCCAAATATGC+TGG | 0.543536 | 1_1:-6846484 | None:intergenic |
| CATATAACAGTACATTTGGA+TGG | 0.551598 | 1_1:-6849268 | None:intergenic |
| ACCCACTTGTGCCAACGACT+CGG | 0.554324 | 1_1:+6849020 | Msa0004360:CDS |
| GAATATATTGTGAAGCTGAA+AGG | 0.555476 | 1_1:+6846851 | Msa0004360:CDS |
| TGAAAATCTTTGCCATATGG+AGG | 0.556494 | 1_1:-6846266 | None:intergenic |
| AGGATCATATCCTGCACCAC+CGG | 0.561279 | 1_1:-6846545 | None:intergenic |
| TGGAAGATTTAGCAATGGAA+AGG | 0.566706 | 1_1:+6846307 | Msa0004360:CDS |
| ACTAAAAGGTCAGAGTATGA+AGG | 0.568719 | 1_1:-6846998 | None:intergenic |
| CCGTTTCAGAGAACAGTGGC+TGG | 0.574955 | 1_1:+6847689 | Msa0004360:intron |
| GGAGGGAATTTGCACTGAGT+TGG | 0.578300 | 1_1:-6846248 | None:intergenic |
| GAAAATCTTTGCCATATGGA+GGG | 0.583008 | 1_1:-6846265 | None:intergenic |
| GTTGTAGACCGAGGGTGCTG+TGG | 0.590207 | 1_1:+6848955 | Msa0004360:CDS |
| GTGAAGCTGAAAGGACTAGT+TGG | 0.592305 | 1_1:+6846860 | Msa0004360:CDS |
| GGTGTCAACTTTGCTTCCGG+TGG | 0.604401 | 1_1:+6846529 | Msa0004360:CDS |
| AAACACATAATCCGAGTCGT+TGG | 0.610398 | 1_1:-6849031 | None:intergenic |
| TCCGAGTCGTTGGCACAAGT+GGG | 0.615115 | 1_1:-6849021 | None:intergenic |
| GGCTTCAAAGTTGTAGACCG+AGG | 0.619507 | 1_1:+6848946 | Msa0004360:intron |
| CCAACTGGAAGATTTAGCAA+TGG | 0.628801 | 1_1:+6846302 | Msa0004360:CDS |
| GCTTCAAAGTTGTAGACCGA+GGG | 0.636914 | 1_1:+6848947 | Msa0004360:CDS |
| ACACCGGTAACCAATTCACT+AGG | 0.638567 | 1_1:-6846511 | None:intergenic |
| TTTCAGAGAACAGTGGCTGG+AGG | 0.665786 | 1_1:+6847692 | Msa0004360:intron |
| ACCGGAAGCAAAGTTGACAC+CGG | 0.686620 | 1_1:-6846527 | None:intergenic |
| CGTACCGTTTCAGAGAACAG+TGG | 0.763484 | 1_1:+6847685 | Msa0004360:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAACATAGTAAAAATT+TGG | - | chr1_1:6848212-6848231 | None:intergenic | 10.0% |
| !!! | TAAAAGAAATTTTTGATAAA+TGG | - | chr1_1:6848833-6848852 | None:intergenic | 10.0% |
| !! | ATATTAACCAAAACTATATA+TGG | + | chr1_1:6846049-6846068 | Msa0004360:intron | 15.0% |
| !!! | ATTTTATTACTATCATCAAT+TGG | - | chr1_1:6846634-6846653 | None:intergenic | 15.0% |
| !! | TGAAATCAAAAATATTTACA+AGG | - | chr1_1:6847078-6847097 | None:intergenic | 15.0% |
| !!! | ATTTAGAATTACCATATTTT+TGG | - | chr1_1:6847874-6847893 | None:intergenic | 15.0% |
| !!! | TAACAAAACATATGTATTTT+TGG | + | chr1_1:6848256-6848275 | Msa0004360:intron | 15.0% |
| !! | GTACTTTATATTTATGTTAA+AGG | + | chr1_1:6848327-6848346 | Msa0004360:intron | 15.0% |
| !! | TTTATATTTATGTTAAAGGT+TGG | + | chr1_1:6848331-6848350 | Msa0004360:intron | 15.0% |
| !!! | AATTGAGTTTCTTTTATTAT+TGG | + | chr1_1:6848584-6848603 | Msa0004360:intron | 15.0% |
| !!! | CTTTTCATAGTATTTTATAT+TGG | + | chr1_1:6848805-6848824 | Msa0004360:intron | 15.0% |
| !! | ATGATTCAAGATTTAATATT+TGG | + | chr1_1:6848898-6848917 | Msa0004360:intron | 15.0% |
| !!! | AGTAACAAATTTTTTCCTTA+CGG | - | chr1_1:6845600-6845619 | None:intergenic | 20.0% |
| !! | TTAATATAATACTGGAAACA+AGG | - | chr1_1:6846036-6846055 | None:intergenic | 20.0% |
| !!! | AGTTTTGGTTAATATAATAC+TGG | - | chr1_1:6846044-6846063 | None:intergenic | 20.0% |
| !!! | AAAAGAACCATATATAGTTT+TGG | - | chr1_1:6846059-6846078 | None:intergenic | 20.0% |
| !! | CTAGAAAGAAAGAAAAAAAA+AGG | + | chr1_1:6846715-6846734 | Msa0004360:intron | 20.0% |
| !! | TTCTTTGAATAATTCTATCT+GGG | - | chr1_1:6846834-6846853 | None:intergenic | 20.0% |
| !! | ATTCTTTGAATAATTCTATC+TGG | - | chr1_1:6846835-6846854 | None:intergenic | 20.0% |
| !! | TAGCACAAAATAAATACTAT+TGG | - | chr1_1:6846912-6846931 | None:intergenic | 20.0% |
| !! | TTAATAAAGTGTAGAAAAAG+TGG | - | chr1_1:6847918-6847937 | None:intergenic | 20.0% |
| !! | TGGATAATTAATTCAATTCA+CGG | + | chr1_1:6847970-6847989 | Msa0004360:intron | 20.0% |
| !! | GTTTATCACATTTAAAAATG+TGG | - | chr1_1:6848088-6848107 | None:intergenic | 20.0% |
| !! | GTTTATCACATTTAAAAATG+TGG | - | chr1_1:6848088-6848107 | None:intergenic | 20.0% |
| !!! | TTTTAATAACAATTACTCTC+CGG | + | chr1_1:6848225-6848244 | Msa0004360:intron | 20.0% |
| !!! | AGATACATGTACTTTTTATT+TGG | - | chr1_1:6848283-6848302 | None:intergenic | 20.0% |
| !!! | ATTTGCAACATAATTTTTTC+AGG | - | chr1_1:6848402-6848421 | None:intergenic | 20.0% |
| !!! | ACTTAATTCACTTTTTTTTG+TGG | + | chr1_1:6848448-6848467 | Msa0004360:intron | 20.0% |
| !! | TAATTCACTAGTAATACTTA+AGG | + | chr1_1:6848548-6848567 | Msa0004360:intron | 20.0% |
| !! | AAAATAAGTGTTAGAGAATA+TGG | + | chr1_1:6848774-6848793 | Msa0004360:intron | 20.0% |
| !! | AAAAATTATTGTCAACTTGT+AGG | + | chr1_1:6848925-6848944 | Msa0004360:intron | 20.0% |
| !!! | TATTTTTTTATGCAACCATT+TGG | + | chr1_1:6848996-6849015 | Msa0004360:CDS | 20.0% |
| !! | AGTACTAAATTGAAAAACAA+GGG | - | chr1_1:6849305-6849324 | None:intergenic | 20.0% |
| ! | ATCTGAGAAGATTAAAATCA+AGG | + | chr1_1:6845549-6845568 | Msa0004360:five_prime_UTR | 25.0% |
| !!! | GTAACAAATTTTTTCCTTAC+GGG | - | chr1_1:6845599-6845618 | None:intergenic | 25.0% |
| !! | CTAAAAGTATAGTCAAAAAG+AGG | - | chr1_1:6846112-6846131 | None:intergenic | 25.0% |
| !!! | TTTTGTTATGTGTAACAGAA+TGG | - | chr1_1:6846359-6846378 | None:intergenic | 25.0% |
| ! | TTACTATCAGTTGAAGAATT+AGG | + | chr1_1:6846445-6846464 | Msa0004360:intron | 25.0% |
| !! | CTCTTTTACTCTTTTCAATT+AGG | - | chr1_1:6846695-6846714 | None:intergenic | 25.0% |
| ! | TGTTTCCTTATATAATAAGC+AGG | + | chr1_1:6846790-6846809 | Msa0004360:intron | 25.0% |
| !!! | AGTATTTATTTTGTGCTAGT+AGG | + | chr1_1:6846914-6846933 | Msa0004360:CDS | 25.0% |
| ! | TAAAAAATTTCAGCAAGCTT+TGG | + | chr1_1:6847111-6847130 | Msa0004360:intron | 25.0% |
| !! | TCATGACGGAAAATAATTAA+CGG | - | chr1_1:6847138-6847157 | None:intergenic | 25.0% |
| ! | ACATAAATCAAAAGTCATGA+CGG | - | chr1_1:6847152-6847171 | None:intergenic | 25.0% |
| ! | TGCGAAGTATAAAATCTTAA+CGG | + | chr1_1:6847519-6847538 | Msa0004360:intron | 25.0% |
| ! | TCCTTCTATATACAAATGAA+AGG | + | chr1_1:6847604-6847623 | Msa0004360:intron | 25.0% |
| ! | TCCTTTCATTTGTATATAGA+AGG | - | chr1_1:6847608-6847627 | None:intergenic | 25.0% |
| ! | TTACAACGATATCAAGTATA+GGG | - | chr1_1:6847847-6847866 | None:intergenic | 25.0% |
| ! | TTTACAACGATATCAAGTAT+AGG | - | chr1_1:6847848-6847867 | None:intergenic | 25.0% |
| ! | GTTGTAAACTACCAAAAATA+TGG | + | chr1_1:6847860-6847879 | Msa0004360:CDS | 25.0% |
| !!! | ACATATGTTTTGTTACTTGT+AGG | - | chr1_1:6848251-6848270 | None:intergenic | 25.0% |
| !! | CACTCTAACATTTGTTAATT+AGG | + | chr1_1:6848368-6848387 | Msa0004360:intron | 25.0% |
| !!! | TAATTCACTTTTTTTTGTGG+TGG | + | chr1_1:6848451-6848470 | Msa0004360:intron | 25.0% |
| ! | AATCTCATGTATGTAAAAGT+TGG | - | chr1_1:6848730-6848749 | None:intergenic | 25.0% |
| !! | TCACTTAATTTGAGAAACTT+AGG | + | chr1_1:6848749-6848768 | Msa0004360:intron | 25.0% |
| !! | AATGTATTTCTGTAGACTTA+GGG | - | chr1_1:6849103-6849122 | None:intergenic | 25.0% |
| !! | AAATGTATTTCTGTAGACTT+AGG | - | chr1_1:6849104-6849123 | None:intergenic | 25.0% |
| ! | ACATCATATAACAGTACATT+TGG | - | chr1_1:6849275-6849294 | None:intergenic | 25.0% |
| ! | GAGTACTAAATTGAAAAACA+AGG | - | chr1_1:6849306-6849325 | None:intergenic | 25.0% |
| !! | GATACTTGTTATGATGTCAA+GGG | - | chr1_1:6845747-6845766 | None:intergenic | 30.0% |
| !! | TGATACTTGTTATGATGTCA+AGG | - | chr1_1:6845748-6845767 | None:intergenic | 30.0% |
| ! | AATCATTAACAAGTGCTGTA+AGG | + | chr1_1:6845784-6845803 | Msa0004360:intron | 30.0% |
| ! | ATCATTAACAAGTGCTGTAA+GGG | + | chr1_1:6845785-6845804 | Msa0004360:intron | 30.0% |
| !! | ATATGTTGACTTTGTCGAAT+CGG | - | chr1_1:6845847-6845866 | None:intergenic | 30.0% |
| ATCATAATCATTGCACTACT+AGG | + | chr1_1:6845867-6845886 | Msa0004360:intron | 30.0% | |
| AGGAAAATCGAATTACTAGT+TGG | + | chr1_1:6845887-6845906 | Msa0004360:intron | 30.0% | |
| GCAGCTAATAACTATATGAA+TGG | - | chr1_1:6845949-6845968 | None:intergenic | 30.0% | |
| TAGTTATTAGCTGCAATGTT+TGG | + | chr1_1:6845955-6845974 | Msa0004360:intron | 30.0% | |
| CTGCAATGTTTAGCATAAAT+AGG | + | chr1_1:6846000-6846019 | Msa0004360:intron | 30.0% | |
| TGTATTTGGAGATTCAATCA+TGG | + | chr1_1:6846196-6846215 | Msa0004360:exon | 30.0% | |
| AGAATATCTTCCAGCATATT+TGG | + | chr1_1:6846474-6846493 | Msa0004360:CDS | 30.0% | |
| TCCTTTGACATCAAAAATAG+AGG | + | chr1_1:6846564-6846583 | Msa0004360:CDS | 30.0% | |
| !!! | ACCTCTATTTTTGATGTCAA+AGG | - | chr1_1:6846568-6846587 | None:intergenic | 30.0% |
| !! | TTAGAGATTGATTTGATCGA+TGG | - | chr1_1:6846611-6846630 | None:intergenic | 30.0% |
| GAATATATTGTGAAGCTGAA+AGG | + | chr1_1:6846851-6846870 | Msa0004360:CDS | 30.0% | |
| TATAAGCTGAGTCTACTAAA+AGG | - | chr1_1:6847015-6847034 | None:intergenic | 30.0% | |
| CTCAGCTTATAATTTCTACA+AGG | + | chr1_1:6847024-6847043 | Msa0004360:CDS | 30.0% | |
| !!! | GGTAGTTTTATTATTCCACA+CGG | + | chr1_1:6847045-6847064 | Msa0004360:intron | 30.0% |
| !!! | GTAGTTTTATTATTCCACAC+GGG | + | chr1_1:6847046-6847065 | Msa0004360:intron | 30.0% |
| !!! | AGCTTGCTGAAATTTTTTAG+AGG | - | chr1_1:6847110-6847129 | None:intergenic | 30.0% |
| ! | CATGACGGAAAATAATTAAC+GGG | - | chr1_1:6847137-6847156 | None:intergenic | 30.0% |
| TGAAAGGAAATGTATCAACT+AGG | + | chr1_1:6847620-6847639 | Msa0004360:intron | 30.0% | |
| TATTCAATGTACCACCAATT+GGG | + | chr1_1:6847660-6847679 | Msa0004360:intron | 30.0% | |
| ACTTGGAAAATTCTGCTTAA+AGG | - | chr1_1:6847795-6847814 | None:intergenic | 30.0% | |
| ATATAAACAATCCTGCTACT+TGG | - | chr1_1:6847812-6847831 | None:intergenic | 30.0% | |
| AAGTAGCAGGATTGTTTATA+TGG | + | chr1_1:6847811-6847830 | Msa0004360:CDS | 30.0% | |
| ATATGGTTAATTCATCTCAG+TGG | + | chr1_1:6847950-6847969 | Msa0004360:intron | 30.0% | |
| AATTGTAGTTAACCACAGTT+TGG | - | chr1_1:6848024-6848043 | None:intergenic | 30.0% | |
| TCATGCTAATGTACAAAAAG+TGG | + | chr1_1:6848164-6848183 | Msa0004360:intron | 30.0% | |
| TGCATAAAATATGCAAAGTC+CGG | - | chr1_1:6848491-6848510 | None:intergenic | 30.0% | |
| GGATAAATGAAAATCACATG+CGG | + | chr1_1:6848605-6848624 | Msa0004360:intron | 30.0% | |
| AAAACATGTACTTATCCCTT+AGG | + | chr1_1:6848651-6848670 | Msa0004360:intron | 30.0% | |
| !! | TTAATTGATAGTGAGAGTTC+AGG | - | chr1_1:6848629-6848648 | None:intergenic | 30.0% |
| ! | GGCAACAAGTATTTTGTAAA+CGG | - | chr1_1:6849082-6849101 | None:intergenic | 30.0% |
| CATATAACAGTACATTTGGA+TGG | - | chr1_1:6849271-6849290 | None:intergenic | 30.0% | |
| AAATCAAGGCAAAAACCCAA+AGG | + | chr1_1:6845563-6845582 | Msa0004360:five_prime_UTR | 35.0% | |
| AAGAGAGAGGGAAAACAAAA+GGG | - | chr1_1:6845632-6845651 | None:intergenic | 35.0% | |
| TTTCCAGCAGTGTTTGTATT+TGG | + | chr1_1:6846182-6846201 | Msa0004360:intron | 35.0% | |
| ATACCGGAAATAACAACAAC+AGG | + | chr1_1:6846219-6846238 | Msa0004360:CDS | 35.0% | |
| GAAAATCTTTGCCATATGGA+GGG | - | chr1_1:6846268-6846287 | None:intergenic | 35.0% | |
| TGAAAATCTTTGCCATATGG+AGG | - | chr1_1:6846269-6846288 | None:intergenic | 35.0% | |
| GCTTGAAAATCTTTGCCATA+TGG | - | chr1_1:6846272-6846291 | None:intergenic | 35.0% | |
| !! | TATGGCAAAGATTTTCAAGC+TGG | + | chr1_1:6846272-6846291 | Msa0004360:CDS | 35.0% |
| TGGAAGATTTAGCAATGGAA+AGG | + | chr1_1:6846307-6846326 | Msa0004360:CDS | 35.0% | |
| ATAGTACCTATAAGATCTGC+TGG | - | chr1_1:6846335-6846354 | None:intergenic | 35.0% | |
| AGATTTGGATCCAAATATGC+TGG | - | chr1_1:6846487-6846506 | None:intergenic | 35.0% | |
| AATTCACTAGGCTGAAGATT+TGG | - | chr1_1:6846502-6846521 | None:intergenic | 35.0% | |
| AAATCTTCAGCCTAGTGAAT+TGG | + | chr1_1:6846501-6846520 | Msa0004360:CDS | 35.0% | |
| AGCTGCCTGCTTATTATATA+AGG | - | chr1_1:6846798-6846817 | None:intergenic | 35.0% | |
| ACTAAAAGGTCAGAGTATGA+AGG | - | chr1_1:6847001-6847020 | None:intergenic | 35.0% | |
| ! | ATGAGTGCACTTAAAAGCAT+GGG | + | chr1_1:6847438-6847457 | Msa0004360:intron | 35.0% |
| AAAGCATGGGAGAAAACATT+TGG | + | chr1_1:6847451-6847470 | Msa0004360:intron | 35.0% | |
| !! | AACTTGCTGAAAACTCATAG+AGG | + | chr1_1:6847480-6847499 | Msa0004360:intron | 35.0% |
| ! | ACTTGCTGAAAACTCATAGA+GGG | + | chr1_1:6847481-6847500 | Msa0004360:intron | 35.0% |
| AAATGTATCAACTAGGTGCA+AGG | + | chr1_1:6847627-6847646 | Msa0004360:intron | 35.0% | |
| GTATTCAATGTACCACCAAT+TGG | + | chr1_1:6847659-6847678 | Msa0004360:intron | 35.0% | |
| TCAATTCACGGTGAAAATTG+TGG | + | chr1_1:6847982-6848001 | Msa0004360:intron | 35.0% | |
| TCATCTACAAAACCAAACTG+TGG | + | chr1_1:6848009-6848028 | Msa0004360:intron | 35.0% | |
| !! | ATGTTTTGTTACTTGTAGGC+CGG | - | chr1_1:6848247-6848266 | None:intergenic | 35.0% |
| !!! | TCACTTTTTTTTGTGGTGGT+CGG | + | chr1_1:6848455-6848474 | Msa0004360:intron | 35.0% |
| CATAAAATATGCAAAGTCCG+GGG | - | chr1_1:6848489-6848508 | None:intergenic | 35.0% | |
| GCATAAAATATGCAAAGTCC+GGG | - | chr1_1:6848490-6848509 | None:intergenic | 35.0% | |
| GAGTTCAGGAATAAACCTAA+GGG | - | chr1_1:6848669-6848688 | None:intergenic | 35.0% | |
| AGAGTTCAGGAATAAACCTA+AGG | - | chr1_1:6848670-6848689 | None:intergenic | 35.0% | |
| CACTATCAATTAAGAAGCTC+CGG | + | chr1_1:6848690-6848709 | Msa0004360:intron | 35.0% | |
| TGTAAAAGTTGGAATGAACC+CGG | - | chr1_1:6848719-6848738 | None:intergenic | 35.0% | |
| ! | ATTTTGTAAACGGCTTCAGT+AGG | - | chr1_1:6849072-6849091 | None:intergenic | 35.0% |
| AGTACATTTGGATGGAATCA+AGG | - | chr1_1:6849263-6849282 | None:intergenic | 35.0% | |
| ACGGGTCTTAAGAATCCTTT+GGG | - | chr1_1:6845581-6845600 | None:intergenic | 40.0% | |
| TACGGGTCTTAAGAATCCTT+TGG | - | chr1_1:6845582-6845601 | None:intergenic | 40.0% | |
| AAGGATTCTTAAGACCCGTA+AGG | + | chr1_1:6845582-6845601 | Msa0004360:intron | 40.0% | |
| CAAGAGAGAGGGAAAACAAA+AGG | - | chr1_1:6845633-6845652 | None:intergenic | 40.0% | |
| TCAAATCCAAGCAAGAGAGA+GGG | - | chr1_1:6845644-6845663 | None:intergenic | 40.0% | |
| !! | ATGCAATGTTCTAAGAACCG+AGG | + | chr1_1:6845708-6845727 | Msa0004360:intron | 40.0% |
| GACTTTGTCGAATCGGTATA+AGG | - | chr1_1:6845840-6845859 | None:intergenic | 40.0% | |
| ! | GGAGAAGTGTAGTGCAAATT+GGG | - | chr1_1:6846091-6846110 | None:intergenic | 40.0% |
| ! | AGGAGAAGTGTAGTGCAAAT+TGG | - | chr1_1:6846092-6846111 | None:intergenic | 40.0% |
| TCTCCAAATACAAACACTGC+TGG | - | chr1_1:6846188-6846207 | None:intergenic | 40.0% | |
| GGAGATTCAATCATGGATAC+CGG | + | chr1_1:6846203-6846222 | Msa0004360:exon | 40.0% | |
| !! | TGGCCTGTTGTTGTTATTTC+CGG | - | chr1_1:6846225-6846244 | None:intergenic | 40.0% |
| !! | AATTTGCACTGAGTTGGTGT+TGG | - | chr1_1:6846245-6846264 | None:intergenic | 40.0% |
| CCATTGCTAAATCTTCCAGT+TGG | - | chr1_1:6846305-6846324 | None:intergenic | 40.0% | |
| CCAACTGGAAGATTTAGCAA+TGG | + | chr1_1:6846302-6846321 | Msa0004360:CDS | 40.0% | |
| AAGGTTCCAGCAGATCTTAT+AGG | + | chr1_1:6846326-6846345 | Msa0004360:CDS | 40.0% | |
| CATGAGTGCACTTAAAAGCA+TGG | + | chr1_1:6847437-6847456 | Msa0004360:intron | 40.0% | |
| ! | AGCAGAATTTTCCAAGTAGC+AGG | + | chr1_1:6847798-6847817 | Msa0004360:CDS | 40.0% |
| !!! | CACTTTTTTTTGTGGTGGTC+GGG | + | chr1_1:6848456-6848475 | Msa0004360:intron | 40.0% |
| !!! | ACTTTTTTTTGTGGTGGTCG+GGG | + | chr1_1:6848457-6848476 | Msa0004360:intron | 40.0% |
| AAACACATAATCCGAGTCGT+TGG | - | chr1_1:6849034-6849053 | None:intergenic | 40.0% | |
| !! | ACGACTCGGATTATGTGTTT+TGG | + | chr1_1:6849034-6849053 | Msa0004360:CDS | 40.0% |
| !! | CGACTCGGATTATGTGTTTT+GGG | + | chr1_1:6849035-6849054 | Msa0004360:CDS | 40.0% |
| ! | TGTTTTCCCTCTCTCTTGCT+TGG | + | chr1_1:6845635-6845654 | Msa0004360:intron | 45.0% |
| CTCAAATCCAAGCAAGAGAG+AGG | - | chr1_1:6845645-6845664 | None:intergenic | 45.0% | |
| TGTCGAATCGGTATAAGGTG+TGG | - | chr1_1:6845835-6845854 | None:intergenic | 45.0% | |
| ! | ACTGCTGGAAACGAAGCATT+TGG | - | chr1_1:6846173-6846192 | None:intergenic | 45.0% |
| CAGTGCAAATTCCCTCCATA+TGG | + | chr1_1:6846254-6846273 | Msa0004360:CDS | 45.0% | |
| !! | GGCAAAGATTTTCAAGCTGG+AGG | + | chr1_1:6846275-6846294 | Msa0004360:CDS | 45.0% |
| CAGCCTAGTGAATTGGTTAC+CGG | + | chr1_1:6846508-6846527 | Msa0004360:CDS | 45.0% | |
| ACACCGGTAACCAATTCACT+AGG | - | chr1_1:6846514-6846533 | None:intergenic | 45.0% | |
| ! | GTGAAGCTGAAAGGACTAGT+TGG | + | chr1_1:6846860-6846879 | Msa0004360:CDS | 45.0% |
| TTACAAGGATCAAACCCGTG+TGG | - | chr1_1:6847063-6847082 | None:intergenic | 45.0% | |
| TGTATCAACTAGGTGCAAGG+AGG | + | chr1_1:6847630-6847649 | Msa0004360:intron | 45.0% | |
| AATTAAGAAGCTCCGGTTGC+CGG | + | chr1_1:6848697-6848716 | Msa0004360:intron | 45.0% | |
| GCTTCAAAGTTGTAGACCGA+GGG | + | chr1_1:6848947-6848966 | Msa0004360:CDS | 45.0% | |
| !!! | ATTAATCATTTTTAAAAATA+TGG | + | chr1_1:6847933-6847952 | Msa0004360:intron | 5.0% |
| AGGGTCTCATGAGCTTACCT+CGG | - | chr1_1:6845728-6845747 | None:intergenic | 50.0% | |
| ! | GCTGGAAACGAAGCATTTGG+TGG | - | chr1_1:6846170-6846189 | None:intergenic | 50.0% |
| GGAGGGAATTTGCACTGAGT+TGG | - | chr1_1:6846251-6846270 | None:intergenic | 50.0% | |
| CAAGCTGGAGGAATTCCAAC+TGG | + | chr1_1:6846287-6846306 | Msa0004360:CDS | 50.0% | |
| ! | ACCGGTGTCAACTTTGCTTC+CGG | + | chr1_1:6846526-6846545 | Msa0004360:CDS | 50.0% |
| ACCGGAAGCAAAGTTGACAC+CGG | - | chr1_1:6846530-6846549 | None:intergenic | 50.0% | |
| AGGATCATATCCTGCACCAC+CGG | - | chr1_1:6846548-6846567 | None:intergenic | 50.0% | |
| CAACTAGGTGCAAGGAGGAT+AGG | + | chr1_1:6847635-6847654 | Msa0004360:intron | 50.0% | |
| TGAAACGGTACGCACCCAAT+TGG | - | chr1_1:6847677-6847696 | None:intergenic | 50.0% | |
| CGTACCGTTTCAGAGAACAG+TGG | + | chr1_1:6847685-6847704 | Msa0004360:intron | 50.0% | |
| ! | CCAGCCACTGTTCTCTGAAA+CGG | - | chr1_1:6847692-6847711 | None:intergenic | 50.0% |
| TTTCAGAGAACAGTGGCTGG+AGG | + | chr1_1:6847692-6847711 | Msa0004360:intron | 50.0% | |
| ! | TGAGCATAGCTCGGTTGGTA+AGG | - | chr1_1:6848518-6848537 | None:intergenic | 50.0% |
| ATTAAGAAGCTCCGGTTGCC+GGG | + | chr1_1:6848698-6848717 | Msa0004360:intron | 50.0% | |
| GGCTTCAAAGTTGTAGACCG+AGG | + | chr1_1:6848946-6848965 | Msa0004360:intron | 50.0% | |
| ! | TGGCACAAGTGGGTTCCAAA+TGG | - | chr1_1:6849014-6849033 | None:intergenic | 50.0% |
| GGTGTCAACTTTGCTTCCGG+TGG | + | chr1_1:6846529-6846548 | Msa0004360:CDS | 55.0% | |
| AACTTTGCTTCCGGTGGTGC+AGG | + | chr1_1:6846535-6846554 | Msa0004360:CDS | 55.0% | |
| AACGGTACGCACCCAATTGG+TGG | - | chr1_1:6847674-6847693 | None:intergenic | 55.0% | |
| CCGTTTCAGAGAACAGTGGC+TGG | + | chr1_1:6847689-6847708 | Msa0004360:intron | 55.0% | |
| GTGTCCTCGTGAGCATAGCT+CGG | - | chr1_1:6848527-6848546 | None:intergenic | 55.0% | |
| GTTGGAATGAACCCGGCAAC+CGG | - | chr1_1:6848712-6848731 | None:intergenic | 55.0% | |
| ACCCACTTGTGCCAACGACT+CGG | + | chr1_1:6849020-6849039 | Msa0004360:CDS | 55.0% | |
| TCCGAGTCGTTGGCACAAGT+GGG | - | chr1_1:6849024-6849043 | None:intergenic | 55.0% | |
| ATCCGAGTCGTTGGCACAAG+TGG | - | chr1_1:6849025-6849044 | None:intergenic | 55.0% | |
| CCTCGTGAGCATAGCTCGGT+TGG | - | chr1_1:6848523-6848542 | None:intergenic | 60.0% | |
| CCAACCGAGCTATGCTCACG+AGG | + | chr1_1:6848520-6848539 | Msa0004360:intron | 60.0% | |
| !! | GTTGTAGACCGAGGGTGCTG+TGG | + | chr1_1:6848955-6848974 | Msa0004360:CDS | 60.0% |
| GGTGGTCGGGGTTTGAACCC+CGG | + | chr1_1:6848469-6848488 | Msa0004360:intron | 65.0% | |
| !! | GACCGAGGGTGCTGTGGCAC+AGG | + | chr1_1:6848961-6848980 | Msa0004360:CDS | 70.0% |
| CGCCTGTGCCACAGCACCCT+CGG | - | chr1_1:6848966-6848985 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 6845519 | 6849329 | 6845519 | ID=Msa0004360;Name=Msa0004360 |
| chr1_1 | mRNA | 6845519 | 6849329 | 6845519 | ID=Msa0004360-mRNA-1;Parent=Msa0004360;Name=Msa0004360-mRNA-1;_AED=0.31;_eAED=0.31;_QI=106|0.8|0.83|1|0.8|0.66|6|192|290 |
| chr1_1 | exon | 6845519 | 6845598 | 6845519 | ID=Msa0004360-mRNA-1:exon:2373;Parent=Msa0004360-mRNA-1 |
| chr1_1 | exon | 6846189 | 6846347 | 6846189 | ID=Msa0004360-mRNA-1:exon:2374;Parent=Msa0004360-mRNA-1 |
| chr1_1 | exon | 6846455 | 6846585 | 6846455 | ID=Msa0004360-mRNA-1:exon:2375;Parent=Msa0004360-mRNA-1 |
| chr1_1 | exon | 6846812 | 6847045 | 6846812 | ID=Msa0004360-mRNA-1:exon:2376;Parent=Msa0004360-mRNA-1 |
| chr1_1 | exon | 6847698 | 6847881 | 6847698 | ID=Msa0004360-mRNA-1:exon:2377;Parent=Msa0004360-mRNA-1 |
| chr1_1 | exon | 6848947 | 6849329 | 6848947 | ID=Msa0004360-mRNA-1:exon:2378;Parent=Msa0004360-mRNA-1 |
| chr1_1 | five_prime_UTR | 6845519 | 6845598 | 6845519 | ID=Msa0004360-mRNA-1:five_prime_utr;Parent=Msa0004360-mRNA-1 |
| chr1_1 | five_prime_UTR | 6846189 | 6846214 | 6846189 | ID=Msa0004360-mRNA-1:five_prime_utr;Parent=Msa0004360-mRNA-1 |
| chr1_1 | CDS | 6846215 | 6846347 | 6846215 | ID=Msa0004360-mRNA-1:cds;Parent=Msa0004360-mRNA-1 |
| chr1_1 | CDS | 6846455 | 6846585 | 6846455 | ID=Msa0004360-mRNA-1:cds;Parent=Msa0004360-mRNA-1 |
| chr1_1 | CDS | 6846812 | 6847045 | 6846812 | ID=Msa0004360-mRNA-1:cds;Parent=Msa0004360-mRNA-1 |
| chr1_1 | CDS | 6847698 | 6847881 | 6847698 | ID=Msa0004360-mRNA-1:cds;Parent=Msa0004360-mRNA-1 |
| chr1_1 | CDS | 6848947 | 6849137 | 6848947 | ID=Msa0004360-mRNA-1:cds;Parent=Msa0004360-mRNA-1 |
| chr1_1 | three_prime_UTR | 6849138 | 6849329 | 6849138 | ID=Msa0004360-mRNA-1:three_prime_utr;Parent=Msa0004360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
