AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0548260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0548260 MtrunA17_Chr4g0031291 98.202 445 7 1 1 445 1 444 0.0 889
Msa0548260 MtrunA17_Chr3g0123281 51.923 416 163 4 1 381 1 414 9.04e-139 408
Msa0548260 MtrunA17_Chr4g0047781 26.761 284 151 13 71 340 102 342 2.99e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0548260 AT2G28800.1 78.495 372 75 3 24 391 40 410 0.0 605
Msa0548260 AT2G28800.4 70.699 372 74 4 24 391 40 380 0.0 529
Msa0548260 AT2G28800.2 81.188 303 52 3 24 322 40 341 1.30e-180 508
Msa0548260 AT2G28800.3 81.188 303 52 3 24 322 40 341 1.54e-180 508
Msa0548260 AT1G24490.1 57.662 385 125 5 60 413 61 438 1.35e-145 425
Msa0548260 AT1G24490.2 49.351 385 120 6 60 413 61 401 1.35e-113 342

Find 137 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGATTGAATTGGAGGAATT+TGG 0.221487 4_1:+42045009 None:intergenic
TGTTGTTACTCAGATATTAA+AGG 0.240430 4_1:-42044079 Msa0548260:intron
CAAATATGGTTGCGCAAATT+AGG 0.245631 4_1:-42040762 Msa0548260:CDS
CATCAGGACTAACAATTTAC+TGG 0.275942 4_1:-42041254 Msa0548260:intron
GCAGGATGGCCATCCACCTT+TGG 0.301935 4_1:-42041523 Msa0548260:intron
TCGGCTTCTGTTTCCGATGA+TGG 0.311599 4_1:-42040487 Msa0548260:CDS
TGCCATGGAGTTTGTTCTTA+AGG 0.317066 4_1:-42044832 Msa0548260:intron
TGTTAACAGAAGGTTTCTTA+TGG 0.318050 4_1:-42043159 Msa0548260:CDS
AAACCTTCAACCTAAAATTA+AGG 0.326230 4_1:-42043724 Msa0548260:CDS
AGAAAGCAGGTGTATGTTAA+AGG 0.327107 4_1:+42039635 None:intergenic
GTGTATAGTCTGGTGCGGTT+AGG 0.331124 4_1:+42045053 None:intergenic
TGTATAGTCTGGTGCGGTTA+GGG 0.336060 4_1:+42045054 None:intergenic
CAGGATGGCCATCCACCTTT+GGG 0.344722 4_1:-42041522 Msa0548260:CDS
ATAGCAAATCCATACGAATA+AGG 0.348748 4_1:+42044033 None:intergenic
TTGAACCTCTTGGGGAACTT+TGG 0.369203 4_1:+42039871 None:intergenic
GAATGAGTTAAGGATTGAAT+TGG 0.370758 4_1:+42044999 None:intergenic
ATTGCTCACTCTTATTGTTA+AGG 0.371624 4_1:-42044007 Msa0548260:CDS
GTAGAGACAAGTGCACGATA+TGG 0.390449 4_1:+42045256 None:intergenic
TGAGAAAGAATAAGAAGAAC+AGG 0.394821 4_1:+42041468 None:intergenic
AGAAAGATATGCCGGTAATC+AGG 0.396770 4_1:-42043694 Msa0548260:intron
TGAGCACAGCTCAACAAATA+TGG 0.403268 4_1:-42040776 Msa0548260:CDS
CAGAAGAACGGAGGTTGGTT+TGG 0.403635 4_1:-42044867 Msa0548260:CDS
AACACCCCTCACCTGATTAC+CGG 0.406242 4_1:+42043683 None:intergenic
GAATACAACTTGAGACTTCA+AGG 0.408158 4_1:-42043543 Msa0548260:CDS
CTTTCTTCAGCTTCTCGTTA+CGG 0.410841 4_1:+42045181 None:intergenic
ACCGGCATATCTTTCTTGAA+TGG 0.419989 4_1:+42043701 None:intergenic
AAAGTGGATCCGGAATTTCT+TGG 0.421708 4_1:-42043096 Msa0548260:CDS
TCTTTCTCAATATGTTTCAA+TGG 0.427391 4_1:-42041454 Msa0548260:CDS
TTCTGTTTCCGATGATGGCT+CGG 0.429591 4_1:-42040482 Msa0548260:CDS
GCTACTATTCCCGTCTGGAT+TGG 0.430547 4_1:-42043317 Msa0548260:CDS
ACTTCCTTTGACAAAGCAAC+AGG 0.431867 4_1:-42043977 Msa0548260:intron
CGCAGATGAAGTTCAACCTC+TGG 0.433019 4_1:-42040512 Msa0548260:CDS
AAAGGATAACTTACCACAAA+TGG 0.435903 4_1:+42043067 None:intergenic
TATAGGTTGTTTACCGACTT+TGG 0.435935 4_1:-42043339 Msa0548260:intron
AAGCTGAGAGAGAGGCTTCA+AGG 0.440562 4_1:+42045158 None:intergenic
TGAAGTTCAACCTCTGGCTT+CGG 0.455794 4_1:-42040506 Msa0548260:CDS
TCAAGGCTATATACCCAAGC+TGG 0.459348 4_1:-42043526 Msa0548260:CDS
TTTGGATGCATACGCCTCTT+CGG 0.461858 4_1:+42039889 None:intergenic
TTCTTATGGATCCCTTCTCT+CGG 0.470607 4_1:-42043145 Msa0548260:CDS
CTTTGGCTACTATTCCCGTC+TGG 0.472299 4_1:-42043322 Msa0548260:CDS
ATATTTGTTGAGCTGTGCTC+AGG 0.473781 4_1:+42040778 None:intergenic
TAGAGACAAGTGCACGATAT+GGG 0.476654 4_1:+42045257 None:intergenic
CACAGCAACATCCGTGGAAG+TGG 0.479567 4_1:+42044890 None:intergenic
TTTATCTAATGTGGCAAATG+AGG 0.481648 4_1:-42043282 Msa0548260:intron
TGAGTTAAGGATTGAATTGG+AGG 0.483415 4_1:+42045002 None:intergenic
AGATGCTGGTGGAATTATTA+CGG 0.484611 4_1:-42040715 Msa0548260:CDS
AAGTTGTTGCGGTGAAGTGA+AGG 0.492325 4_1:+42045080 None:intergenic
CAATGGGTTAACCCCAGCTT+GGG 0.493653 4_1:+42043513 None:intergenic
GTGGTCCGTTATCATACAAC+AGG 0.494705 4_1:+42039806 None:intergenic
TTCTCACTATCTGTGCCATC+AGG 0.496768 4_1:-42041270 Msa0548260:CDS
GACATCAATAGAATGAGTTA+AGG 0.498511 4_1:+42044989 None:intergenic
ATTGAATTGGAGGAATTTGG+TGG 0.501888 4_1:+42045012 None:intergenic
TTGCCACATTAGATAAAGCT+TGG 0.504430 4_1:+42043288 None:intergenic
GGTGTCTTCGCCAGAGCTGA+AGG 0.506014 4_1:-42044963 Msa0548260:CDS
ATGGCCATCCACCTTTGGGT+TGG 0.506568 4_1:-42041518 Msa0548260:CDS
CCTCGCAAACAAAATGCATT+CGG 0.507668 4_1:-42045234 Msa0548260:five_prime_UTR
ATAAAGAAGTCCTTCAGCTC+TGG 0.512310 4_1:+42044953 None:intergenic
AGTAACTGCATCGGCGGTAA+CGG 0.517484 4_1:+42044914 None:intergenic
GCTGCTAGACAAAGTGGATC+CGG 0.517710 4_1:-42043106 Msa0548260:CDS
CAGTAAATTGTTAGTCCTGA+TGG 0.520024 4_1:+42041255 None:intergenic
TGGTTTCATCTCCGATGCCA+TGG 0.520375 4_1:-42044847 Msa0548260:CDS
TGCAGTTACTTCCACTTCCA+CGG 0.521286 4_1:-42044901 Msa0548260:CDS
CTAACCTGTTGCTTTGTCAA+AGG 0.522023 4_1:+42043973 None:intergenic
AAATGATCTCTTAGCTCGTC+CGG 0.523022 4_1:+42040692 None:intergenic
AAGTTTCTTCCACTCATGAT+CGG 0.524406 4_1:-42041297 Msa0548260:CDS
GCCATTCAAGAAAGATATGC+CGG 0.528006 4_1:-42043702 Msa0548260:CDS
AATTTACATTTGCTAACATG+TGG 0.530000 4_1:+42039660 None:intergenic
GTGAACTTTGGTGTATAGTC+TGG 0.530472 4_1:+42045043 None:intergenic
GTGCATGTGCCTTATTCGTA+TGG 0.532237 4_1:-42044042 Msa0548260:CDS
TTGCGGTGAAGTGAAGGAAG+TGG 0.533549 4_1:+42045086 None:intergenic
GAACAAAGATAGTATGATAA+CGG 0.535844 4_1:-42039591 Msa0548260:three_prime_UTR
GATATAAGTGTACCTGCCAA+TGG 0.537731 4_1:+42043496 None:intergenic
CTCTCTCAGCTTCTCAACCA+TGG 0.539374 4_1:-42045147 Msa0548260:exon
CCAAGCTGGGGTTAACCCAT+TGG 0.540862 4_1:-42043512 Msa0548260:CDS
CCAATGGGTTAACCCCAGCT+TGG 0.541467 4_1:+42043512 None:intergenic
AGAGGTTGAACTTCATCTGC+GGG 0.544085 4_1:+42040514 None:intergenic
ATCTCATCTCCATCCTTCAT+CGG 0.544854 4_1:-42045113 Msa0548260:CDS
CCAGCATCTTCATTAACAGC+GGG 0.547593 4_1:+42040729 None:intergenic
GAAAGCCTGTTGTATGATAA+CGG 0.548195 4_1:-42039811 Msa0548260:exon
GTGGAAACTGAAGTGAACTT+TGG 0.551842 4_1:+42045031 None:intergenic
AGTGGAGTTCCGATGAAGGA+TGG 0.552255 4_1:+42045104 None:intergenic
ATATAAGTGTACCTGCCAAT+GGG 0.553064 4_1:+42043497 None:intergenic
TTGAAGGGACTGTTAACAGA+AGG 0.553996 4_1:-42043169 Msa0548260:intron
AGCATTGCTGCTAGACAAAG+TGG 0.554199 4_1:-42043112 Msa0548260:CDS
AGGAAGTGGAGTTCCGATGA+AGG 0.554731 4_1:+42045100 None:intergenic
GTACCAAGCTTTATCTAATG+TGG 0.555358 4_1:-42043291 Msa0548260:CDS
CAAGGCTATATACCCAAGCT+GGG 0.556897 4_1:-42043525 Msa0548260:CDS
TGGTTGAGAAGCTGAGAGAG+AGG 0.557850 4_1:+42045150 None:intergenic
ACTCATTCTATTGATGTCGC+CGG 0.560337 4_1:-42044984 Msa0548260:CDS
ATCGGCGGTAACGGCAGCGT+CGG 0.560478 4_1:+42044923 None:intergenic
CTAGTGGGACCACCGAGAGA+AGG 0.560903 4_1:+42043133 None:intergenic
GAGAAGTAGCCGATCATGAG+TGG 0.561223 4_1:+42041288 None:intergenic
GCTGGGGTTAACCCATTGGC+AGG 0.563009 4_1:-42043508 Msa0548260:intron
AAACTACAAACAATTGTATG+TGG 0.564468 4_1:+42039567 None:intergenic
CTGTGCAGAAGAACGGAGGT+TGG 0.565225 4_1:-42044872 Msa0548260:CDS
CAAGTGCACGATATGGGCAG+TGG 0.568484 4_1:+42045263 None:intergenic
TAGTGGGACCACCGAGAGAA+GGG 0.572027 4_1:+42043134 None:intergenic
GTTTACGCAGTTAAAAGAAG+AGG 0.578308 4_1:-42040566 Msa0548260:CDS
GTTACTCAGATATTAAAGGA+TGG 0.583255 4_1:-42044075 Msa0548260:intron
TTATGGATCCCTTCTCTCGG+TGG 0.585688 4_1:-42043142 Msa0548260:CDS
GATGTTGCTGTGCAGAAGAA+CGG 0.586401 4_1:-42044879 Msa0548260:CDS
CCTGACATGCTTACCTGAGG+TGG 0.590658 4_1:+42041420 None:intergenic
GGAAATCATGAAACCACCTC+AGG 0.590966 4_1:-42041433 Msa0548260:intron
AAGAACAAACTCCATGGCAT+CGG 0.591393 4_1:+42044836 None:intergenic
CATGCCAACCCAAAGGTGGA+TGG 0.591741 4_1:+42041514 None:intergenic
TGTCTAGCAGCAATGCTAGT+GGG 0.599990 4_1:+42043118 None:intergenic
GCTGGTGGAATTATTACGGC+CGG 0.602330 4_1:-42040711 Msa0548260:CDS
ATATGGTTGCGCAAATTAGG+AGG 0.606383 4_1:-42040759 Msa0548260:CDS
CCCGCTGTTAATGAAGATGC+TGG 0.608454 4_1:-42040729 Msa0548260:CDS
TTCAGCTCTGGCGAAGACAC+CGG 0.609578 4_1:+42044965 None:intergenic
GTATAGTCTGGTGCGGTTAG+GGG 0.616910 4_1:+42045055 None:intergenic
TTGTCTAGCAGCAATGCTAG+TGG 0.618690 4_1:+42043117 None:intergenic
AGCCCGAAAAGGATGGTGAA+AGG 0.621319 4_1:-42040665 Msa0548260:intron
TACCTTAAGAACAAACTCCA+TGG 0.622891 4_1:+42044830 None:intergenic
ACCAGCATCTTCATTAACAG+CGG 0.630961 4_1:+42040728 None:intergenic
TGAGATCAGTGTCTTCGCCA+TGG 0.634085 4_1:+42045130 None:intergenic
GGAAGTGGAAGTAACTGCAT+CGG 0.637850 4_1:+42044905 None:intergenic
AAACTACAAACAATTGTGTG+TGG 0.640301 4_1:+42039787 None:intergenic
CAGAGGTTGAACTTCATCTG+CGG 0.640709 4_1:+42040513 None:intergenic
TGCATCCAAAGTTCCCCAAG+AGG 0.646535 4_1:-42039876 Msa0548260:CDS
TGGTACAGACCAATCCAGAC+GGG 0.646904 4_1:+42043308 None:intergenic
GTGTCATGCCAACCCAAAGG+TGG 0.654970 4_1:+42041510 None:intergenic
CGTTACGGAATAGAGATGAG+AGG 0.661059 4_1:+42045196 None:intergenic
CTTTGTCAAAGGAAGTGTAG+CGG 0.665172 4_1:+42043984 None:intergenic
TTGGTACAGACCAATCCAGA+CGG 0.665545 4_1:+42043307 None:intergenic
CTTTGGTGTATAGTCTGGTG+CGG 0.666008 4_1:+42045048 None:intergenic
AGTGGAAGTAACTGCATCGG+CGG 0.666117 4_1:+42044908 None:intergenic
CTTCTGCACAGCAACATCCG+TGG 0.668398 4_1:+42044884 None:intergenic
GAAACAGAAGCCGAAGCCAG+AGG 0.676371 4_1:+42040496 None:intergenic
ACGGGAATAGTAGCCAAAGT+CGG 0.680935 4_1:+42043326 None:intergenic
GCTGTTAATGAAGATGCTGG+TGG 0.685781 4_1:-42040726 Msa0548260:CDS
GGAACAAGAAGTTACCGAAG+AGG 0.686286 4_1:-42039903 Msa0548260:CDS
ATACGAATAAGGCACATGCA+CGG 0.688460 4_1:+42044044 None:intergenic
GGTTAGGGGAGAAGTTGTTG+CGG 0.695964 4_1:+42045069 None:intergenic
GCAGTGTCATGCCAACCCAA+AGG 0.709975 4_1:+42041507 None:intergenic
AAGGCTATATACCCAAGCTG+GGG 0.714930 4_1:-42043524 Msa0548260:CDS
GTTGCTGTGCAGAAGAACGG+AGG 0.748792 4_1:-42044876 Msa0548260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTTTTTTGCATATT+TGG - chr4_1:42041729-42041748 Msa0548260:intron 10.0%
!! AACAATTTGTATAAAAAAAA+GGG + chr4_1:42042561-42042580 None:intergenic 10.0%
!! AAACAATTTGTATAAAAAAA+AGG + chr4_1:42042562-42042581 None:intergenic 10.0%
!! TTTATTTATTTATATCAGTA+TGG - chr4_1:42043064-42043083 Msa0548260:intron 10.0%
!! TAAAAAAAAAAAAGTAAGTT+AGG + chr4_1:42043403-42043422 None:intergenic 10.0%
!!! ATTCTTTATATGTTTTATTA+TGG - chr4_1:42043620-42043639 Msa0548260:intron 10.0%
!!! TTCTTTATATGTTTTATTAT+GGG - chr4_1:42043621-42043640 Msa0548260:intron 10.0%
!! TTCTATAAATAAATCAAATT+TGG - chr4_1:42043666-42043685 Msa0548260:intron 10.0%
!! TTTATTTCATATACTTTCTT+TGG + chr4_1:42040041-42040060 None:intergenic 15.0%
!!! CATTTATGGTTTTTTTTTTT+TGG + chr4_1:42040915-42040934 None:intergenic 15.0%
!! CAAAAAAAAAAAACCATAAA+TGG - chr4_1:42040913-42040932 Msa0548260:intron 15.0%
!!! ATTGAAAACTTTTAATTTGA+AGG - chr4_1:42041577-42041596 Msa0548260:intron 15.0%
!!! TTGAAAACTTTTAATTTGAA+GGG - chr4_1:42041578-42041597 Msa0548260:intron 15.0%
!!! TTAGTTTCTTTATAGTTTTA+AGG - chr4_1:42042841-42042860 Msa0548260:intron 15.0%
!!! AATTTTCTTCTACATTTTTT+TGG - chr4_1:42043018-42043037 Msa0548260:intron 15.0%
!!! GAAATTTGTATTTTCTTATA+TGG + chr4_1:42044576-42044595 None:intergenic 15.0%
!! TTTCTCAAAAAAGTAAAAAT+AGG + chr4_1:42044747-42044766 None:intergenic 15.0%
!! CTTAAATTACATTAAAATGA+CGG + chr4_1:42044778-42044797 None:intergenic 15.0%
!!! ATTTTAATGTAATTTAAGGT+TGG - chr4_1:42044780-42044799 Msa0548260:intron 15.0%
!!! TTAAGTTTTGTATATTTCAA+CGG - chr4_1:42045221-42045240 Msa0548260:five_prime_UTR 15.0%
!!! TCAGTTTATTTTCATAAGTT+CGG + chr4_1:42040070-42040089 None:intergenic 20.0%
!! AAAATAAACTGAAAACAGTT+TGG - chr4_1:42040078-42040097 Msa0548260:intron 20.0%
!! AAATAAACTGAAAACAGTTT+GGG - chr4_1:42040079-42040098 Msa0548260:intron 20.0%
!!! ATTTGTTTTTATGTGATCTT+TGG - chr4_1:42040112-42040131 Msa0548260:intron 20.0%
!! AACAAAATCCTTATATAGTA+AGG + chr4_1:42040197-42040216 None:intergenic 20.0%
!! TCATGAAATTTGTATTATTG+AGG - chr4_1:42040227-42040246 Msa0548260:intron 20.0%
!! TGGAAATGTATACATATAAA+TGG - chr4_1:42040477-42040496 Msa0548260:CDS 20.0%
!!! TAGTTTTGTTTTCCTTTTTA+TGG + chr4_1:42040595-42040614 None:intergenic 20.0%
!! CATTAAAAACAAACCATAAA+TGG - chr4_1:42040880-42040899 Msa0548260:intron 20.0%
!!! TGACTTTATTTAATACATGT+AGG - chr4_1:42040993-42041012 Msa0548260:intron 20.0%
!!! GCAATTTTATCATTTTGTAT+AGG - chr4_1:42041406-42041425 Msa0548260:intron 20.0%
!! TATAAAGAAACTAATTGATG+TGG + chr4_1:42042835-42042854 None:intergenic 20.0%
!!! AAAACATAATTTTGTTTTCC+CGG + chr4_1:42042935-42042954 None:intergenic 20.0%
!! TAAAATAATAAGGAAAGAGA+AGG + chr4_1:42043371-42043390 None:intergenic 20.0%
!! TATTTCACAAACTATATCAA+TGG - chr4_1:42043535-42043554 Msa0548260:CDS 20.0%
!! ATAAAGAATGTATGAAGTTA+TGG + chr4_1:42043609-42043628 None:intergenic 20.0%
!! AGATAGAAAGAAGTAATTAA+AGG - chr4_1:42044382-42044401 Msa0548260:intron 20.0%
!! ATTTCATCTTTATACAAGAT+TGG + chr4_1:42044536-42044555 None:intergenic 20.0%
!! AATCTTGTATAAAGATGAAA+TGG - chr4_1:42044535-42044554 Msa0548260:intron 20.0%
!!! CGTCATTTTAATGTAATTTA+AGG - chr4_1:42044776-42044795 Msa0548260:intron 20.0%
!!! GTAAGTTTTGTATATTACAA+CGG - chr4_1:42045001-42045020 Msa0548260:CDS 20.0%
! TTATATAGTAAGGTCATGTT+TGG + chr4_1:42040187-42040206 None:intergenic 25.0%
! AAACATGACCTTACTATATA+AGG - chr4_1:42040186-42040205 Msa0548260:intron 25.0%
! TACAAATTTCATGAATCTCA+AGG + chr4_1:42040221-42040240 None:intergenic 25.0%
! TCTAAGAAAAAACTCAAAGA+CGG + chr4_1:42040292-42040311 None:intergenic 25.0%
! TTTAAATGAGAACGATGTTA+AGG - chr4_1:42040339-42040358 Msa0548260:intron 25.0%
!!! ATGATAACTCTAAAGCAAAA+GGG + chr4_1:42040563-42040582 None:intergenic 25.0%
! CATGTAAAATAGCCATAAAA+AGG - chr4_1:42040580-42040599 Msa0548260:intron 25.0%
! TGTTGTTACTCAGATATTAA+AGG - chr4_1:42040683-42040702 Msa0548260:CDS 25.0%
! CAAATTACAGCAATTTCTAT+AGG - chr4_1:42040814-42040833 Msa0548260:intron 25.0%
!!! TGTTTTTAATGTTTCAAACG+AGG + chr4_1:42040871-42040890 None:intergenic 25.0%
!!! ATGGTTTTTTTTTTTTGGAC+TGG + chr4_1:42040910-42040929 None:intergenic 25.0%
! CTGAAAGAAAAATCCATTTA+TGG + chr4_1:42040929-42040948 None:intergenic 25.0%
! AAACCTTCAACCTAAAATTA+AGG - chr4_1:42041038-42041057 Msa0548260:intron 25.0%
! AGTTGAGAAGAAAATGATAA+AGG + chr4_1:42041301-42041320 None:intergenic 25.0%
! TGATTCTGTATAATAATGCT+TGG - chr4_1:42041322-42041341 Msa0548260:CDS 25.0%
! AACATTTGCAATATCATAAC+TGG - chr4_1:42041367-42041386 Msa0548260:intron 25.0%
! ACATTTGCAATATCATAACT+GGG - chr4_1:42041368-42041387 Msa0548260:intron 25.0%
! TATGCACAACTTATAAAAAG+TGG + chr4_1:42041976-42041995 None:intergenic 25.0%
!! TAGTTAGGAATTTAGCATTT+TGG - chr4_1:42042120-42042139 Msa0548260:intron 25.0%
!! AGTTAGGAATTTAGCATTTT+GGG - chr4_1:42042121-42042140 Msa0548260:intron 25.0%
!! ACTAAGGAATTTAGCATTTT+GGG - chr4_1:42042197-42042216 Msa0548260:intron 25.0%
!!! TATACAAATTGTTTCTACCA+AGG - chr4_1:42042342-42042361 Msa0548260:intron 25.0%
!!! ATACAAATTGTTTCTACCAA+GGG - chr4_1:42042343-42042362 Msa0548260:intron 25.0%
!! TTTCATAAGCTTTTATGGAT+AGG + chr4_1:42042667-42042686 None:intergenic 25.0%
!!! CTTGTTTTCATAAGCTTTTA+TGG + chr4_1:42042672-42042691 None:intergenic 25.0%
!! GTGTTTATAAGAGTGTATTT+AGG + chr4_1:42042774-42042793 None:intergenic 25.0%
! AAAAGCAAAATGCTTTACTA+GGG + chr4_1:42042798-42042817 None:intergenic 25.0%
! AAAAAGCAAAATGCTTTACT+AGG + chr4_1:42042799-42042818 None:intergenic 25.0%
!!! AAGCATTTTGCTTTTTACAA+TGG - chr4_1:42042803-42042822 Msa0548260:intron 25.0%
! ACTTTAGTATTTCTTCTCTT+TGG - chr4_1:42042959-42042978 Msa0548260:intron 25.0%
! AAAAAGAAAGTGAGAAAAGA+GGG + chr4_1:42042989-42043008 None:intergenic 25.0%
! TAAAAAGAAAGTGAGAAAAG+AGG + chr4_1:42042990-42043009 None:intergenic 25.0%
!! TTTCTCACTTTCTTTTTACA+AGG - chr4_1:42042992-42043011 Msa0548260:intron 25.0%
! TCTTTCTCAATATGTTTCAA+TGG - chr4_1:42043308-42043327 Msa0548260:CDS 25.0%
! GTCTGCTTTGTAAAATAATA+AGG + chr4_1:42043381-42043400 None:intergenic 25.0%
!! AAAGGTGTATTATATGGATA+CGG + chr4_1:42043708-42043727 None:intergenic 25.0%
!! GAAGAAAAAGGTGTATTATA+TGG + chr4_1:42043714-42043733 None:intergenic 25.0%
!!! AGATTTTTTTTCCTTTTGCT+AGG - chr4_1:42043947-42043966 Msa0548260:intron 25.0%
! TTCAATCCATCATATACTTA+TGG - chr4_1:42044155-42044174 Msa0548260:intron 25.0%
! AATTTGCCATAAGTATATGA+TGG + chr4_1:42044164-42044183 None:intergenic 25.0%
! ATCATATACTTATGGCAAAT+TGG - chr4_1:42044163-42044182 Msa0548260:intron 25.0%
! ATTGTATACAATTTGTGACT+AGG + chr4_1:42044347-42044366 None:intergenic 25.0%
!!! AAGAAGTAATTAAAGGTGTT+CGG - chr4_1:42044389-42044408 Msa0548260:intron 25.0%
! TTCTATGCAATATGAAATCA+TGG + chr4_1:42044451-42044470 None:intergenic 25.0%
! TATACAAGATTGGAAATAGA+TGG + chr4_1:42044526-42044545 None:intergenic 25.0%
! TAAGAAAATACAAATTTCCC+AGG - chr4_1:42044578-42044597 Msa0548260:intron 25.0%
!! AATTTACATTTGCTAACATG+TGG + chr4_1:42045105-42045124 None:intergenic 25.0%
!!! GTTTTTAATTGTAAGAAAGC+AGG + chr4_1:42045143-42045162 None:intergenic 25.0%
! GAACAAAGATAGTATGATAA+CGG - chr4_1:42045171-42045190 Msa0548260:five_prime_UTR 25.0%
! AAACTACAAACAATTGTATG+TGG + chr4_1:42045198-42045217 None:intergenic 25.0%
GAATGAGTTAAGGATTGAAT+TGG + chr4_1:42039766-42039785 None:intergenic 30.0%
GACATCAATAGAATGAGTTA+AGG + chr4_1:42039776-42039795 None:intergenic 30.0%
TAAAGTACGTTCAAAACCAA+CGG + chr4_1:42040323-42040342 None:intergenic 30.0%
ATCCTGAAATTATATGTTGC+AGG - chr4_1:42040367-42040386 Msa0548260:intron 30.0%
TCCTGAAATTATATGTTGCA+GGG - chr4_1:42040368-42040387 Msa0548260:intron 30.0%
! GTAATGCTATTTGTTTCGAA+AGG - chr4_1:42040505-42040524 Msa0548260:CDS 30.0%
!! CATGATAACTCTAAAGCAAA+AGG + chr4_1:42040564-42040583 None:intergenic 30.0%
! CAATCCTCCAATTTTATTAC+AGG + chr4_1:42040637-42040656 None:intergenic 30.0%
GTTACTCAGATATTAAAGGA+TGG - chr4_1:42040687-42040706 Msa0548260:CDS 30.0%
ATAGCAAATCCATACGAATA+AGG + chr4_1:42040732-42040751 None:intergenic 30.0%
ATTGCTCACTCTTATTGTTA+AGG - chr4_1:42040755-42040774 Msa0548260:CDS 30.0%
ACGAGGTTATCATAATTTCA+TGG + chr4_1:42040854-42040873 None:intergenic 30.0%
!! TCTTGAATGGCCTTAATTTT+AGG + chr4_1:42041051-42041070 None:intergenic 30.0%
TGTACCTTAAAATGATAGCA+TGG - chr4_1:42041154-42041173 Msa0548260:intron 30.0%
! ACAACCATGCTATCATTTTA+AGG + chr4_1:42041161-42041180 None:intergenic 30.0%
GTATTCTTTCCTTGAAATGA+GGG + chr4_1:42041205-42041224 None:intergenic 30.0%
TGTATTCTTTCCTTGAAATG+AGG + chr4_1:42041206-42041225 None:intergenic 30.0%
TTTATCTAATGTGGCAAATG+AGG - chr4_1:42041480-42041499 Msa0548260:CDS 30.0%
TGTTAACAGAAGGTTTCTTA+TGG - chr4_1:42041603-42041622 Msa0548260:intron 30.0%
AAAGGATAACTTACCACAAA+TGG + chr4_1:42041698-42041717 None:intergenic 30.0%
ATTATTTCGCTTATGAGCAA+AGG + chr4_1:42041716-42041735 None:intergenic 30.0%
! CTCTTGACAATCATTTTCTT+TGG - chr4_1:42041817-42041836 Msa0548260:intron 30.0%
TGCTTGTGAAAATATATGCA+AGG - chr4_1:42041948-42041967 Msa0548260:intron 30.0%
! ACTGAAATCTAAGACTAACT+GGG + chr4_1:42042010-42042029 None:intergenic 30.0%
! TACTGAAATCTAAGACTAAC+TGG + chr4_1:42042011-42042030 None:intergenic 30.0%
GCTAAATTCCTAACTACTAA+AGG + chr4_1:42042116-42042135 None:intergenic 30.0%
! GTTAGGAATTTAGCATTTTG+GGG - chr4_1:42042122-42042141 Msa0548260:intron 30.0%
! TTAGGAATTTAGCATTTTGG+GGG - chr4_1:42042123-42042142 Msa0548260:intron 30.0%
TAAATTCCTTAGTCCCTATT+TGG + chr4_1:42042190-42042209 None:intergenic 30.0%
! GACTAAGGAATTTAGCATTT+TGG - chr4_1:42042196-42042215 Msa0548260:intron 30.0%
! CTAAGGAATTTAGCATTTTG+GGG - chr4_1:42042198-42042217 Msa0548260:intron 30.0%
! TAAGGAATTTAGCATTTTGG+GGG - chr4_1:42042199-42042218 Msa0548260:intron 30.0%
AGCCTCTTGTGTAAAAATAA+GGG - chr4_1:42042434-42042453 Msa0548260:intron 30.0%
!! AATTGTTTCTACCATCAAAG+AGG - chr4_1:42042574-42042593 Msa0548260:intron 30.0%
AAAGCAAAATGCTTTACTAG+GGG + chr4_1:42042797-42042816 None:intergenic 30.0%
!!! CTTTATAGTTTTAAGGAGCT+CGG - chr4_1:42042848-42042867 Msa0548260:intron 30.0%
! TTTATTGGTTGTGTTGTTGT+AGG - chr4_1:42042873-42042892 Msa0548260:intron 30.0%
!!! CTTCTACATTTTTTTGGTTG+TGG - chr4_1:42043024-42043043 Msa0548260:intron 30.0%
TGAGAAAGAATAAGAAGAAC+AGG + chr4_1:42043297-42043316 None:intergenic 30.0%
!! AGAAGTGTATTCTTTTGAGT+AGG + chr4_1:42043438-42043457 None:intergenic 30.0%
TAGGAACTTAATAACTAGAG+AGG + chr4_1:42043564-42043583 None:intergenic 30.0%
! AAATGGTTTCTGGAAGAAAA+AGG + chr4_1:42043726-42043745 None:intergenic 30.0%
ATACTTGTGTTTCACACATT+AGG + chr4_1:42043763-42043782 None:intergenic 30.0%
TATCTAAGTTCTTGAGCATA+TGG + chr4_1:42043793-42043812 None:intergenic 30.0%
ACTTAGATACTTCTTTCTGA+AGG - chr4_1:42043804-42043823 Msa0548260:intron 30.0%
TTATTCGTAAACCTAGCAAA+AGG + chr4_1:42043961-42043980 None:intergenic 30.0%
! AGGTCAGTATTTTATGATAC+AGG - chr4_1:42044117-42044136 Msa0548260:intron 30.0%
GAAGAAGAAAAAGTTAAGCA+AGG - chr4_1:42044220-42044239 Msa0548260:intron 30.0%
! ATTGAGCTTTTCTTTTTGTC+CGG + chr4_1:42044424-42044443 None:intergenic 30.0%
AATAGATGGTAGTTGGAATT+CGG + chr4_1:42044512-42044531 None:intergenic 30.0%
! TATAAAGTTGGTTTAGCATG+GGG + chr4_1:42044837-42044856 None:intergenic 30.0%
! GTATAAAGTTGGTTTAGCAT+GGG + chr4_1:42044838-42044857 None:intergenic 30.0%
! TGTATAAAGTTGGTTTAGCA+TGG + chr4_1:42044839-42044858 None:intergenic 30.0%
ATGCTAAACCAACTTTATAC+AGG - chr4_1:42044838-42044857 Msa0548260:CDS 30.0%
TTCTTGTTCCTGTATAAAGT+TGG + chr4_1:42044849-42044868 None:intergenic 30.0%
AGAAAAACTTTGAACCTCTT+GGG + chr4_1:42044903-42044922 None:intergenic 30.0%
TAGAAAAACTTTGAACCTCT+TGG + chr4_1:42044904-42044923 None:intergenic 30.0%
! AAGAGGTTCAAAGTTTTTCT+AGG - chr4_1:42044903-42044922 Msa0548260:CDS 30.0%
! AGAGGTTCAAAGTTTTTCTA+GGG - chr4_1:42044904-42044923 Msa0548260:CDS 30.0%
AAACTACAAACAATTGTGTG+TGG + chr4_1:42044978-42044997 None:intergenic 30.0%
! ACAACGGTTTGTAACATTTT+TGG - chr4_1:42045017-42045036 Msa0548260:CDS 30.0%
! CAACGGTTTGTAACATTTTT+GGG - chr4_1:42045018-42045037 Msa0548260:CDS 30.0%
! TCAACGGTTTGTAACATTTT+TGG - chr4_1:42045237-42045256 Msa0548260:five_prime_UTR 30.0%
! CAACGGTTTGTAACATTTTT+GGG - chr4_1:42045018-42045037 Msa0548260:CDS 30.0%
ATTGAATTGGAGGAATTTGG+TGG + chr4_1:42039753-42039772 None:intergenic 35.0%
AGGATTGAATTGGAGGAATT+TGG + chr4_1:42039756-42039775 None:intergenic 35.0%
TGAGTTAAGGATTGAATTGG+AGG + chr4_1:42039763-42039782 None:intergenic 35.0%
TACCTTAAGAACAAACTCCA+TGG + chr4_1:42039935-42039954 None:intergenic 35.0%
TTCTTAGAAGATTGAACCGT+TGG - chr4_1:42040304-42040323 Msa0548260:intron 35.0%
TCCCTGCAACATATAATTTC+AGG + chr4_1:42040372-42040391 None:intergenic 35.0%
!! ACTCTAAAGCAAAAGGGTAA+GGG + chr4_1:42040557-42040576 None:intergenic 35.0%
!! AACTCTAAAGCAAAAGGGTA+AGG + chr4_1:42040558-42040577 None:intergenic 35.0%
! CCAATTTTATTACAGGAACG+TGG + chr4_1:42040630-42040649 None:intergenic 35.0%
CCACGTTCCTGTAATAAAAT+TGG - chr4_1:42040627-42040646 Msa0548260:intron 35.0%
CGTTCCTGTAATAAAATTGG+AGG - chr4_1:42040630-42040649 Msa0548260:intron 35.0%
!!! GGAGGATTGCATTTTTTAAC+AGG - chr4_1:42040648-42040667 Msa0548260:intron 35.0%
!!! TGGCCTTAATTTTAGGTTGA+AGG + chr4_1:42041044-42041063 None:intergenic 35.0%
ATTTCATTGCCCTCATTTCA+AGG - chr4_1:42041193-42041212 Msa0548260:intron 35.0%
GAATACAACTTGAGACTTCA+AGG - chr4_1:42041219-42041238 Msa0548260:intron 35.0%
ATATAAGTGTACCTGCCAAT+GGG + chr4_1:42041268-42041287 None:intergenic 35.0%
!! TATAGGTTGTTTACCGACTT+TGG - chr4_1:42041423-42041442 Msa0548260:intron 35.0%
! GTACCAAGCTTTATCTAATG+TGG - chr4_1:42041471-42041490 Msa0548260:CDS 35.0%
TTGCCACATTAGATAAAGCT+TGG + chr4_1:42041477-42041496 None:intergenic 35.0%
GTGGCAAATGAGGTAATTAA+TGG - chr4_1:42041490-42041509 Msa0548260:CDS 35.0%
TGGAAAAAGCCAAGAAATTC+CGG + chr4_1:42041678-42041697 None:intergenic 35.0%
!! TTCTTGGCTTTTTCCATTTG+TGG - chr4_1:42041682-42041701 Msa0548260:intron 35.0%
TTGTTTCAAGAACCATGACT+GGG + chr4_1:42041851-42041870 None:intergenic 35.0%
ATTGTTTCAAGAACCATGAC+TGG + chr4_1:42041852-42041871 None:intergenic 35.0%
AGTAATGTAGCAATTTGCGT+AGG - chr4_1:42041922-42041941 Msa0548260:intron 35.0%
! AGACATGTTTTATGCAGCAT+AGG - chr4_1:42042037-42042056 Msa0548260:intron 35.0%
TGCAGATTCCTTTAGTAGTT+AGG - chr4_1:42042105-42042124 Msa0548260:intron 35.0%
ATGCTCATTTAGTCCCTATT+TGG + chr4_1:42042265-42042284 None:intergenic 35.0%
TAGGGACTAAATGAGCATTT+AGG - chr4_1:42042267-42042286 Msa0548260:intron 35.0%
CAGCCTCTTGTGTAAAAATA+AGG - chr4_1:42042433-42042452 Msa0548260:intron 35.0%
GCCTCTTGTGTAAAAATAAG+GGG - chr4_1:42042435-42042454 Msa0548260:intron 35.0%
!!! TCCCCTTATTTTTACACAAG+AGG + chr4_1:42042439-42042458 None:intergenic 35.0%
GTATAAAAAAAAGGGCAGCT+CGG + chr4_1:42042553-42042572 None:intergenic 35.0%
AACTCTCATTTCCTCTTTGA+TGG + chr4_1:42042588-42042607 None:intergenic 35.0%
TAAACATTTGTGCAAGTGCT+TGG + chr4_1:42042739-42042758 None:intergenic 35.0%
AAGCAAAATGCTTTACTAGG+GGG + chr4_1:42042796-42042815 None:intergenic 35.0%
GTCTTGTGGTAAATGTAACT+AGG - chr4_1:42042900-42042919 Msa0548260:intron 35.0%
GGTAAATGTAACTAGGAAGT+AGG - chr4_1:42042907-42042926 Msa0548260:intron 35.0%
TCTTGATAAATGACTGCAGT+AGG + chr4_1:42043124-42043143 None:intergenic 35.0%
ACGTCTGTTAATTGTTATGC+AGG - chr4_1:42043221-42043240 Msa0548260:intron 35.0%
CTGTTAATTGTTATGCAGGA+TGG - chr4_1:42043225-42043244 Msa0548260:intron 35.0%
AAGTTTCTTCCACTCATGAT+CGG - chr4_1:42043465-42043484 Msa0548260:intron 35.0%
CAGTAAATTGTTAGTCCTGA+TGG + chr4_1:42043510-42043529 None:intergenic 35.0%
CATCAGGACTAACAATTTAC+TGG - chr4_1:42043508-42043527 Msa0548260:intron 35.0%
CATATCAAGGAAATGGTTTC+TGG + chr4_1:42043736-42043755 None:intergenic 35.0%
TACACACACACTATTAGATG+TGG - chr4_1:42043865-42043884 Msa0548260:intron 35.0%
CAAATATGGTTGCGCAAATT+AGG - chr4_1:42044000-42044019 Msa0548260:CDS 35.0%
AGATGCTGGTGGAATTATTA+CGG - chr4_1:42044047-42044066 Msa0548260:CDS 35.0%
! ATCATTTTCTAAGCCCGAAA+AGG - chr4_1:42044086-42044105 Msa0548260:intron 35.0%
! ATGGCAAATTGGTGATTTAC+AGG - chr4_1:42044174-42044193 Msa0548260:intron 35.0%
GTTTACGCAGTTAAAAGAAG+AGG - chr4_1:42044196-42044215 Msa0548260:intron 35.0%
! TTTTCTTTTTGTCCGGAGTT+GGG + chr4_1:42044417-42044436 None:intergenic 35.0%
GATTGGAAATAGATGGTAGT+TGG + chr4_1:42044519-42044538 None:intergenic 35.0%
AATTTCCCAGGAAATTCAAG+AGG - chr4_1:42044590-42044609 Msa0548260:intron 35.0%
! CAACATCTTTTCCATAGCAT+GGG + chr4_1:42044714-42044733 None:intergenic 35.0%
! TCAACATCTTTTCCATAGCA+TGG + chr4_1:42044715-42044734 None:intergenic 35.0%
GAAAAACTTTGAACCTCTTG+GGG + chr4_1:42044902-42044921 None:intergenic 35.0%
GAAAGCCTGTTGTATGATAA+CGG - chr4_1:42044951-42044970 Msa0548260:CDS 35.0%
AGAAAGCAGGTGTATGTTAA+AGG + chr4_1:42045130-42045149 None:intergenic 35.0%
TAGAGACAAGTGCACGATAT+GGG + chr4_1:42039508-42039527 None:intergenic 40.0%
CCTCGCAAACAAAATGCATT+CGG - chr4_1:42039528-42039547 Msa0548260:three_prime_UTR 40.0%
CTTTCTTCAGCTTCTCGTTA+CGG + chr4_1:42039584-42039603 None:intergenic 40.0%
ATCTCATCTCCATCCTTCAT+CGG - chr4_1:42039649-42039668 Msa0548260:three_prime_UTR 40.0%
! GTGAACTTTGGTGTATAGTC+TGG + chr4_1:42039722-42039741 None:intergenic 40.0%
GTGGAAACTGAAGTGAACTT+TGG + chr4_1:42039734-42039753 None:intergenic 40.0%
ACTCATTCTATTGATGTCGC+CGG - chr4_1:42039778-42039797 Msa0548260:three_prime_UTR 40.0%
ATAAAGAAGTCCTTCAGCTC+TGG + chr4_1:42039812-42039831 None:intergenic 40.0%
AAGAACAAACTCCATGGCAT+CGG + chr4_1:42039929-42039948 None:intergenic 40.0%
! TGCCATGGAGTTTGTTCTTA+AGG - chr4_1:42039930-42039949 Msa0548260:intron 40.0%
TCCACCAGTTTCAATGTACT+TGG - chr4_1:42040531-42040550 Msa0548260:CDS 40.0%
ATACGAATAAGGCACATGCA+CGG + chr4_1:42040721-42040740 None:intergenic 40.0%
! CTTTGTCAAAGGAAGTGTAG+CGG + chr4_1:42040781-42040800 None:intergenic 40.0%
ACTTCCTTTGACAAAGCAAC+AGG - chr4_1:42040785-42040804 Msa0548260:CDS 40.0%
!! CTAACCTGTTGCTTTGTCAA+AGG + chr4_1:42040792-42040811 None:intergenic 40.0%
!! TTGGACTGGCAATCCATTTA+TGG + chr4_1:42040896-42040915 None:intergenic 40.0%
GCCATTCAAGAAAGATATGC+CGG - chr4_1:42041060-42041079 Msa0548260:intron 40.0%
ACCGGCATATCTTTCTTGAA+TGG + chr4_1:42041064-42041083 None:intergenic 40.0%
AGAAAGATATGCCGGTAATC+AGG - chr4_1:42041068-42041087 Msa0548260:intron 40.0%
GATATAAGTGTACCTGCCAA+TGG + chr4_1:42041269-42041288 None:intergenic 40.0%
AACTGGGCTGTACTTATAGA+AGG - chr4_1:42041384-42041403 Msa0548260:intron 40.0%
TTGAAGGGACTGTTAACAGA+AGG - chr4_1:42041593-42041612 Msa0548260:intron 40.0%
TTCTTATGGATCCCTTCTCT+CGG - chr4_1:42041617-42041636 Msa0548260:intron 40.0%
AAAGTGGATCCGGAATTTCT+TGG - chr4_1:42041666-42041685 Msa0548260:intron 40.0%
TGACAGACTCACAAAGTACA+AGG + chr4_1:42041767-42041786 None:intergenic 40.0%
ACCACAGAATGTGCCAAATA+GGG - chr4_1:42042174-42042193 Msa0548260:intron 40.0%
AATGTGCCAAATAGGGACTA+AGG - chr4_1:42042181-42042200 Msa0548260:intron 40.0%
!! GAATTTAGCATTTTGGGGGT+GGG - chr4_1:42042127-42042146 Msa0548260:intron 40.0%
!! AATTTAGCATTTTGGGGGTG+GGG - chr4_1:42042128-42042147 Msa0548260:intron 40.0%
ACCACAGAATGTGCCAAATA+GGG - chr4_1:42042174-42042193 Msa0548260:intron 40.0%
GTAGGATACACCAAAATGGT+GGG - chr4_1:42042466-42042485 Msa0548260:intron 40.0%
!! TTAAGGAGCTCGGTGTTTAT+TGG - chr4_1:42042858-42042877 Msa0548260:intron 40.0%
! TTGTTGTAGGTTGAGTCTTG+TGG - chr4_1:42042886-42042905 Msa0548260:intron 40.0%
TGTAACTAGGAAGTAGGAAC+CGG - chr4_1:42042913-42042932 Msa0548260:intron 40.0%
TCAAGATGTAGTAGCCTAGT+AGG - chr4_1:42043138-42043157 Msa0548260:CDS 40.0%
! AAAAAAGTGTACCGCCTACT+AGG + chr4_1:42043155-42043174 None:intergenic 40.0%
AGGCAGTCATATCAAGGAAA+TGG + chr4_1:42043743-42043762 None:intergenic 40.0%
CACATTAGGCAGTCATATCA+AGG + chr4_1:42043749-42043768 None:intergenic 40.0%
! ATATTTGTTGAGCTGTGCTC+AGG + chr4_1:42043987-42044006 None:intergenic 40.0%
TGAGCACAGCTCAACAAATA+TGG - chr4_1:42043986-42044005 Msa0548260:CDS 40.0%
ATATGGTTGCGCAAATTAGG+AGG - chr4_1:42044003-42044022 Msa0548260:CDS 40.0%
ACCAGCATCTTCATTAACAG+CGG + chr4_1:42044037-42044056 None:intergenic 40.0%
AAATGATCTCTTAGCTCGTC+CGG + chr4_1:42044073-42044092 None:intergenic 40.0%
! TTTTCTAAGCCCGAAAAGGA+TGG - chr4_1:42044090-42044109 Msa0548260:intron 40.0%
! TGACCTTTCACCATCCTTTT+CGG + chr4_1:42044103-42044122 None:intergenic 40.0%
!! TATGATGGATTGAAAGACCG+AGG + chr4_1:42044149-42044168 None:intergenic 40.0%
! TTTTACATCCGAGCCATCAT+CGG + chr4_1:42044291-42044310 None:intergenic 40.0%
CTCGGATGTAAAAAACGAGA+AGG - chr4_1:42044298-42044317 Msa0548260:intron 40.0%
! CTTTTCTTTTTGTCCGGAGT+TGG + chr4_1:42044418-42044437 None:intergenic 40.0%
GAGAGAATCAGGAAAGAAGT+GGG + chr4_1:42044632-42044651 None:intergenic 40.0%
AGAGAGAATCAGGAAAGAAG+TGG + chr4_1:42044633-42044652 None:intergenic 40.0%
AATAGGATGGTCAGATGGTT+AGG + chr4_1:42044682-42044701 None:intergenic 40.0%
TGGGAAAATCAGGAATAGGA+TGG + chr4_1:42044695-42044714 None:intergenic 40.0%
AGCATGGGAAAATCAGGAAT+AGG + chr4_1:42044699-42044718 None:intergenic 40.0%
! TTCCTGATTTTCCCATGCTA+TGG - chr4_1:42044700-42044719 Msa0548260:intron 40.0%
TTCCATAGCATGGGAAAATC+AGG + chr4_1:42044705-42044724 None:intergenic 40.0%
!!! GGGGTTTTTTGGTAGAAGAA+TGG + chr4_1:42044818-42044837 None:intergenic 40.0%
!!! TGGTTTAGCATGGGGTTTTT+TGG + chr4_1:42044829-42044848 None:intergenic 40.0%
GTAGAGACAAGTGCACGATA+TGG + chr4_1:42039509-42039528 None:intergenic 45.0%
!! CCGAATGCATTTTGTTTGCG+AGG + chr4_1:42039531-42039550 None:intergenic 45.0%
CGTTACGGAATAGAGATGAG+AGG + chr4_1:42039569-42039588 None:intergenic 45.0%
AAGTTGTTGCGGTGAAGTGA+AGG + chr4_1:42039685-42039704 None:intergenic 45.0%
TGTATAGTCTGGTGCGGTTA+GGG + chr4_1:42039711-42039730 None:intergenic 45.0%
! CTTTGGTGTATAGTCTGGTG+CGG + chr4_1:42039717-42039736 None:intergenic 45.0%
GGAAGTGGAAGTAACTGCAT+CGG + chr4_1:42039860-42039879 None:intergenic 45.0%
TGCAGTTACTTCCACTTCCA+CGG - chr4_1:42039861-42039880 Msa0548260:CDS 45.0%
GATGTTGCTGTGCAGAAGAA+CGG - chr4_1:42039883-42039902 Msa0548260:CDS 45.0%
GCCAAGTACATTGAAACTGG+TGG + chr4_1:42040535-42040554 None:intergenic 45.0%
AGGGCCAAGTACATTGAAAC+TGG + chr4_1:42040538-42040557 None:intergenic 45.0%
CAGGAACGTGGAACATTTGT+AGG + chr4_1:42040618-42040637 None:intergenic 45.0%
! GTGCATGTGCCTTATTCGTA+TGG - chr4_1:42040720-42040739 Msa0548260:CDS 45.0%
ATATGCCGGTAATCAGGTGA+GGG - chr4_1:42041074-42041093 Msa0548260:intron 45.0%
TCAAGGCTATATACCCAAGC+TGG - chr4_1:42041236-42041255 Msa0548260:intron 45.0%
CAAGGCTATATACCCAAGCT+GGG - chr4_1:42041237-42041256 Msa0548260:intron 45.0%
AAGGCTATATACCCAAGCTG+GGG - chr4_1:42041238-42041257 Msa0548260:intron 45.0%
ACGGGAATAGTAGCCAAAGT+CGG + chr4_1:42041439-42041458 None:intergenic 45.0%
TTGGTACAGACCAATCCAGA+CGG + chr4_1:42041458-42041477 None:intergenic 45.0%
TGTCTAGCAGCAATGCTAGT+GGG + chr4_1:42041647-42041666 None:intergenic 45.0%
TTGTCTAGCAGCAATGCTAG+TGG + chr4_1:42041648-42041667 None:intergenic 45.0%
AGCATTGCTGCTAGACAAAG+TGG - chr4_1:42041650-42041669 Msa0548260:intron 45.0%
TTGGAGCTTATTCCCAGTCA+TGG - chr4_1:42041836-42041855 Msa0548260:intron 45.0%
TATGCAGCATAGGTGCAAGT+TGG - chr4_1:42042047-42042066 Msa0548260:intron 45.0%
!! GGAATTTAGCATTTTGGGGG+TGG - chr4_1:42042126-42042145 Msa0548260:intron 45.0%
!! ATTTAGCATTTTGGGGGTGG+AGG - chr4_1:42042129-42042148 Msa0548260:intron 45.0%
!! TTTAGCATTTTGGGGGTGGA+GGG - chr4_1:42042130-42042149 Msa0548260:intron 45.0%
CACCACAGAATGTGCCAAAT+AGG - chr4_1:42042173-42042192 Msa0548260:intron 45.0%
TCCCTATTTGGCACATTCTG+TGG + chr4_1:42042178-42042197 None:intergenic 45.0%
!! GGAATTTAGCATTTTGGGGG+TGG - chr4_1:42042126-42042145 Msa0548260:intron 45.0%
!! ATTTAGCATTTTGGGGGTGG+GGG - chr4_1:42042129-42042148 Msa0548260:intron 45.0%
CACCACAGAATGTGCCAAAT+AGG - chr4_1:42042173-42042192 Msa0548260:intron 45.0%
TCCCTATTTGGCACATTCTG+TGG + chr4_1:42042178-42042197 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr4_1:42042388-42042407 Msa0548260:intron 45.0%
AAATAAGGGGAAGACTGCGT+AGG - chr4_1:42042448-42042467 Msa0548260:intron 45.0%
CTGCGTAGGATACACCAAAA+TGG - chr4_1:42042462-42042481 Msa0548260:intron 45.0%
CGTAGGATACACCAAAATGG+TGG - chr4_1:42042465-42042484 Msa0548260:intron 45.0%
ACTAAAGCTCCCACATACAC+AGG + chr4_1:42042527-42042546 None:intergenic 45.0%
GTAACTAGGAAGTAGGAACC+GGG - chr4_1:42042914-42042933 Msa0548260:intron 45.0%
AGATGTAGTAGCCTAGTAGG+CGG - chr4_1:42043141-42043160 Msa0548260:CDS 45.0%
GGAAATCATGAAACCACCTC+AGG - chr4_1:42043329-42043348 Msa0548260:CDS 45.0%
ATACCTGACATGCTTACCTG+AGG + chr4_1:42043348-42043367 None:intergenic 45.0%
TTCTCACTATCTGTGCCATC+AGG - chr4_1:42043492-42043511 Msa0548260:intron 45.0%
CCAGCATCTTCATTAACAGC+GGG + chr4_1:42044036-42044055 None:intergenic 45.0%
GCTGTTAATGAAGATGCTGG+TGG - chr4_1:42044036-42044055 Msa0548260:CDS 45.0%
! GACCTTTCACCATCCTTTTC+GGG + chr4_1:42044102-42044121 None:intergenic 45.0%
TATGATACAGGTTGCAGCCT+CGG - chr4_1:42044129-42044148 Msa0548260:intron 45.0%
AGAGGTTGAACTTCATCTGC+GGG + chr4_1:42044251-42044270 None:intergenic 45.0%
CAGAGGTTGAACTTCATCTG+CGG + chr4_1:42044252-42044271 None:intergenic 45.0%
! TGAAGTTCAACCTCTGGCTT+CGG - chr4_1:42044256-42044275 Msa0548260:intron 45.0%
! TTCTGTTTCCGATGATGGCT+CGG - chr4_1:42044280-42044299 Msa0548260:intron 45.0%
TCAGGAATAGGATGGTCAGA+TGG + chr4_1:42044687-42044706 None:intergenic 45.0%
GGAACAAGAAGTTACCGAAG+AGG - chr4_1:42044859-42044878 Msa0548260:CDS 45.0%
TTTGGATGCATACGCCTCTT+CGG + chr4_1:42044876-42044895 None:intergenic 45.0%
TTGAACCTCTTGGGGAACTT+TGG + chr4_1:42044894-42044913 None:intergenic 45.0%
GTGGTCCGTTATCATACAAC+AGG + chr4_1:42044959-42044978 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTGTTATA+TGG - chr4_1:42040457-42040476 Msa0548260:intron 5.0%
!! AAATTTGAAAATTAAAAAAT+AGG + chr4_1:42043583-42043602 None:intergenic 5.0%
AAGCTGAGAGAGAGGCTTCA+AGG + chr4_1:42039607-42039626 None:intergenic 50.0%
TGGTTGAGAAGCTGAGAGAG+AGG + chr4_1:42039615-42039634 None:intergenic 50.0%
CTCTCTCAGCTTCTCAACCA+TGG - chr4_1:42039615-42039634 Msa0548260:three_prime_UTR 50.0%
TGAGATCAGTGTCTTCGCCA+TGG + chr4_1:42039635-42039654 None:intergenic 50.0%
AGTGGAGTTCCGATGAAGGA+TGG + chr4_1:42039661-42039680 None:intergenic 50.0%
AGGAAGTGGAGTTCCGATGA+AGG + chr4_1:42039665-42039684 None:intergenic 50.0%
TTGCGGTGAAGTGAAGGAAG+TGG + chr4_1:42039679-42039698 None:intergenic 50.0%
GGTTAGGGGAGAAGTTGTTG+CGG + chr4_1:42039696-42039715 None:intergenic 50.0%
GTATAGTCTGGTGCGGTTAG+GGG + chr4_1:42039710-42039729 None:intergenic 50.0%
GTGTATAGTCTGGTGCGGTT+AGG + chr4_1:42039712-42039731 None:intergenic 50.0%
! AGTAACTGCATCGGCGGTAA+CGG + chr4_1:42039851-42039870 None:intergenic 50.0%
AGTGGAAGTAACTGCATCGG+CGG + chr4_1:42039857-42039876 None:intergenic 50.0%
! CAGAAGAACGGAGGTTGGTT+TGG - chr4_1:42039895-42039914 Msa0548260:CDS 50.0%
TGGTTTCATCTCCGATGCCA+TGG - chr4_1:42039915-42039934 Msa0548260:intron 50.0%
GATATGCCGGTAATCAGGTG+AGG - chr4_1:42041073-42041092 Msa0548260:intron 50.0%
TATGCCGGTAATCAGGTGAG+GGG - chr4_1:42041075-42041094 Msa0548260:intron 50.0%
AACACCCCTCACCTGATTAC+CGG + chr4_1:42041082-42041101 None:intergenic 50.0%
!! CAATGGGTTAACCCCAGCTT+GGG + chr4_1:42041252-42041271 None:intergenic 50.0%
CTTTGGCTACTATTCCCGTC+TGG - chr4_1:42041440-42041459 Msa0548260:CDS 50.0%
GCTACTATTCCCGTCTGGAT+TGG - chr4_1:42041445-42041464 Msa0548260:CDS 50.0%
TGGTACAGACCAATCCAGAC+GGG + chr4_1:42041457-42041476 None:intergenic 50.0%
TTATGGATCCCTTCTCTCGG+TGG - chr4_1:42041620-42041639 Msa0548260:intron 50.0%
GCTGCTAGACAAAGTGGATC+CGG - chr4_1:42041656-42041675 Msa0548260:intron 50.0%
!! TTAGCATTTTGGGGGTGGAG+GGG - chr4_1:42042131-42042150 Msa0548260:intron 50.0%
CTGTGGTGAACAGACCATAC+CGG + chr4_1:42042161-42042180 None:intergenic 50.0%
!! TTTAGCATTTTGGGGGTGGG+GGG - chr4_1:42042206-42042225 Msa0548260:intron 50.0%
CTGTGGTGAACAGACCATAC+CGG + chr4_1:42042161-42042180 None:intergenic 50.0%
TTTCTACCAAGGGAGAGCCT+TGG - chr4_1:42042353-42042372 Msa0548260:intron 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr4_1:42042373-42042392 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr4_1:42042394-42042413 Msa0548260:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr4_1:42042395-42042414 Msa0548260:intron 50.0%
ACATACACAGGTCCAGGAAG+GGG + chr4_1:42042515-42042534 None:intergenic 50.0%
CACATACACAGGTCCAGGAA+GGG + chr4_1:42042516-42042535 None:intergenic 50.0%
CTTCCTGGACCTGTGTATGT+GGG - chr4_1:42042515-42042534 Msa0548260:intron 50.0%
GAGAAGTAGCCGATCATGAG+TGG + chr4_1:42043477-42043496 None:intergenic 50.0%
CCCGCTGTTAATGAAGATGC+TGG - chr4_1:42044033-42044052 Msa0548260:CDS 50.0%
GCTGGTGGAATTATTACGGC+CGG - chr4_1:42044051-42044070 Msa0548260:CDS 50.0%
AGCCCGAAAAGGATGGTGAA+AGG - chr4_1:42044097-42044116 Msa0548260:intron 50.0%
CGCAGATGAAGTTCAACCTC+TGG - chr4_1:42044250-42044269 Msa0548260:intron 50.0%
TCGGCTTCTGTTTCCGATGA+TGG - chr4_1:42044275-42044294 Msa0548260:intron 50.0%
CCAGGCCTCTTGAATTTCCT+GGG + chr4_1:42044598-42044617 None:intergenic 50.0%
ACCAGGCCTCTTGAATTTCC+TGG + chr4_1:42044599-42044618 None:intergenic 50.0%
!! AAGTGGGTTGAGACAGAACC+AGG + chr4_1:42044616-42044635 None:intergenic 50.0%
AGTAGGCGGAAGAGAGAATC+AGG + chr4_1:42044643-42044662 None:intergenic 50.0%
GGAAGGGGAAACAAAGTAGG+CGG + chr4_1:42044657-42044676 None:intergenic 50.0%
GAGGGAAGGGGAAACAAAGT+AGG + chr4_1:42044660-42044679 None:intergenic 50.0%
TCAGATGGTTAGGAGGGAAG+GGG + chr4_1:42044672-42044691 None:intergenic 50.0%
GTCAGATGGTTAGGAGGGAA+GGG + chr4_1:42044673-42044692 None:intergenic 50.0%
GGATGGTCAGATGGTTAGGA+GGG + chr4_1:42044678-42044697 None:intergenic 50.0%
AGGATGGTCAGATGGTTAGG+AGG + chr4_1:42044679-42044698 None:intergenic 50.0%
TGCATCCAAAGTTCCCCAAG+AGG - chr4_1:42044886-42044905 Msa0548260:CDS 50.0%
CAAGTGCACGATATGGGCAG+TGG + chr4_1:42039502-42039521 None:intergenic 55.0%
! TTCAGCTCTGGCGAAGACAC+CGG + chr4_1:42039800-42039819 None:intergenic 55.0%
CACAGCAACATCCGTGGAAG+TGG + chr4_1:42039875-42039894 None:intergenic 55.0%
CTTCTGCACAGCAACATCCG+TGG + chr4_1:42039881-42039900 None:intergenic 55.0%
GTTGCTGTGCAGAAGAACGG+AGG - chr4_1:42039886-42039905 Msa0548260:CDS 55.0%
CTGTGCAGAAGAACGGAGGT+TGG - chr4_1:42039890-42039909 Msa0548260:CDS 55.0%
!! CCAATGGGTTAACCCCAGCT+TGG + chr4_1:42041253-42041272 None:intergenic 55.0%
CCAAGCTGGGGTTAACCCAT+TGG - chr4_1:42041250-42041269 Msa0548260:intron 55.0%
TAGTGGGACCACCGAGAGAA+GGG + chr4_1:42041631-42041650 None:intergenic 55.0%
! AGGAAGGGGTCCCACCATTT+TGG + chr4_1:42042479-42042498 None:intergenic 55.0%
! AAAATGGTGGGACCCCTTCC+TGG - chr4_1:42042478-42042497 Msa0548260:intron 55.0%
CCACATACACAGGTCCAGGA+AGG + chr4_1:42042517-42042536 None:intergenic 55.0%
CCTTCCTGGACCTGTGTATG+TGG - chr4_1:42042514-42042533 Msa0548260:intron 55.0%
CAGGATGGCCATCCACCTTT+GGG - chr4_1:42043240-42043259 Msa0548260:intron 55.0%
ATGGCCATCCACCTTTGGGT+TGG - chr4_1:42043244-42043263 Msa0548260:intron 55.0%
CATGCCAACCCAAAGGTGGA+TGG + chr4_1:42043251-42043270 None:intergenic 55.0%
GTGTCATGCCAACCCAAAGG+TGG + chr4_1:42043255-42043274 None:intergenic 55.0%
GCAGTGTCATGCCAACCCAA+AGG + chr4_1:42043258-42043277 None:intergenic 55.0%
CCTGACATGCTTACCTGAGG+TGG + chr4_1:42043345-42043364 None:intergenic 55.0%
CCACCTCAGGTAAGCATGTC+AGG - chr4_1:42043342-42043361 Msa0548260:intron 55.0%
GAAACAGAAGCCGAAGCCAG+AGG + chr4_1:42044269-42044288 None:intergenic 55.0%
AGGTGTTCGGATCCCAACTC+CGG - chr4_1:42044402-42044421 Msa0548260:intron 55.0%
CCCAGGAAATTCAAGAGGCC+TGG - chr4_1:42044595-42044614 Msa0548260:intron 55.0%
GGTCAGATGGTTAGGAGGGA+AGG + chr4_1:42044674-42044693 None:intergenic 55.0%
GGTGTCTTCGCCAGAGCTGA+AGG - chr4_1:42039799-42039818 Msa0548260:exon 60.0%
GCTGGGGTTAACCCATTGGC+AGG - chr4_1:42041254-42041273 Msa0548260:intron 60.0%
CTAGTGGGACCACCGAGAGA+AGG + chr4_1:42041632-42041651 None:intergenic 60.0%
AAGGGAGAGCCTTGGCGCAA+CGG - chr4_1:42042361-42042380 Msa0548260:intron 60.0%
GCTCCCACATACACAGGTCC+AGG + chr4_1:42042521-42042540 None:intergenic 60.0%
GCAGGATGGCCATCCACCTT+TGG - chr4_1:42043239-42043258 Msa0548260:intron 60.0%
! ATCGGCGGTAACGGCAGCGT+CGG + chr4_1:42039842-42039861 None:intergenic 65.0%
! TTGGGGGTGGAGGGGTATGC+CGG - chr4_1:42042139-42042158 Msa0548260:intron 65.0%
! GGTGGAGGGGTATGCCGGTA+TGG - chr4_1:42042144-42042163 Msa0548260:intron 65.0%
! TTTGGGGGTGGGGGGTATGC+CGG - chr4_1:42042214-42042233 Msa0548260:intron 65.0%
GTTGCGCCAAGGCTCTCCCT+TGG + chr4_1:42042362-42042381 None:intergenic 65.0%
GACCCCTTCCTGGACCTGGT+GGG - chr4_1:42042488-42042507 Msa0548260:intron 65.0%
GTCCCACCAGGTCCAGGAAG+GGG + chr4_1:42042493-42042512 None:intergenic 65.0%
GGTCCCACCAGGTCCAGGAA+GGG + chr4_1:42042494-42042513 None:intergenic 65.0%
! GGGTGGGGGGTATGCCGGTA+TGG - chr4_1:42042219-42042238 Msa0548260:intron 70.0%
GTGGGACCCCTTCCTGGACC+TGG - chr4_1:42042484-42042503 Msa0548260:intron 70.0%
GGACCCCTTCCTGGACCTGG+TGG - chr4_1:42042487-42042506 Msa0548260:intron 70.0%
GGGTCCCACCAGGTCCAGGA+AGG + chr4_1:42042495-42042514 None:intergenic 70.0%
GAAGGGGTCCCACCAGGTCC+AGG + chr4_1:42042499-42042518 None:intergenic 70.0%
GACCTGGTGGGACCCCTTCC+TGG - chr4_1:42042500-42042519 Msa0548260:intron 70.0%
GTCCAGGAAGGGGTCCCACC+AGG + chr4_1:42042483-42042502 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 42039490 42045294 42039490 ID=Msa0548260;Name=Msa0548260
chr4_1 mRNA 42039490 42045294 42039490 ID=Msa0548260-mRNA-1;Parent=Msa0548260;Name=Msa0548260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=144|1|1|1|1|1|11|327|445
chr4_1 exon 42039490 42039924 42039490 ID=Msa0548260-mRNA-1:exon:10885;Parent=Msa0548260-mRNA-1
chr4_1 exon 42040465 42040588 42040465 ID=Msa0548260-mRNA-1:exon:10884;Parent=Msa0548260-mRNA-1
chr4_1 exon 42040666 42040815 42040666 ID=Msa0548260-mRNA-1:exon:10883;Parent=Msa0548260-mRNA-1
chr4_1 exon 42041255 42041358 42041255 ID=Msa0548260-mRNA-1:exon:10882;Parent=Msa0548260-mRNA-1
chr4_1 exon 42041434 42041541 42041434 ID=Msa0548260-mRNA-1:exon:10881;Parent=Msa0548260-mRNA-1
chr4_1 exon 42043081 42043185 42043081 ID=Msa0548260-mRNA-1:exon:10880;Parent=Msa0548260-mRNA-1
chr4_1 exon 42043283 42043356 42043283 ID=Msa0548260-mRNA-1:exon:10879;Parent=Msa0548260-mRNA-1
chr4_1 exon 42043509 42043569 42043509 ID=Msa0548260-mRNA-1:exon:10878;Parent=Msa0548260-mRNA-1
chr4_1 exon 42043695 42043769 42043695 ID=Msa0548260-mRNA-1:exon:10877;Parent=Msa0548260-mRNA-1
chr4_1 exon 42043978 42044088 42043978 ID=Msa0548260-mRNA-1:exon:10876;Parent=Msa0548260-mRNA-1
chr4_1 exon 42044833 42045294 42044833 ID=Msa0548260-mRNA-1:exon:10875;Parent=Msa0548260-mRNA-1
chr4_1 five_prime_UTR 42045151 42045294 42045151 ID=Msa0548260-mRNA-1:five_prime_utr;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42044833 42045150 42044833 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42043978 42044088 42043978 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42043695 42043769 42043695 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42043509 42043569 42043509 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42043283 42043356 42043283 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42043081 42043185 42043081 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42041434 42041541 42041434 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42041255 42041358 42041255 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42040666 42040815 42040666 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42040465 42040588 42040465 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 CDS 42039817 42039924 42039817 ID=Msa0548260-mRNA-1:cds;Parent=Msa0548260-mRNA-1
chr4_1 three_prime_UTR 42039490 42039816 42039490 ID=Msa0548260-mRNA-1:three_prime_utr;Parent=Msa0548260-mRNA-1
Gene Sequence

>Msa0548260

ATGGCGAAGACACTGATCTCATCTCCATCCTTCATCGGAACTCCACTTCCTTCACTTCACCGCAACAACTTCTCCCCTAACCGCACCAGACTATACACCAAAGTTCACTTCAGTTTCCACCAAATTCCTCCAATTCAATCCTTAACTCATTCTATTGATGTCGCCGGTGTCTTCGCCAGAGCTGAAGGACTTCTTTATACGCTCGCCGACGCTGCCGTTACCGCCGATGCAGTTACTTCCACTTCCACGGATGTTGCTGTGCAGAAGAACGGAGGTTGGTTTGGTTTCATCTCCGATGCCATGGAGTTTGTTCTTAAGATATTAAAGGATGGTTTGTCTGCCGTGCATGTGCCTTATTCGTATGGATTTGCTATCATATTGCTCACTCTTATTGTTAAGGCCGCTACACTTCCTTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCCGGTAATCAGGAAAGAATACAACTTGAGACTTCAAGGCTATATACCCAAGCTGGGGTTAACCCATTGGCAGGTTGTTTACCGACTTTGGCTACTATTCCCGTCTGGATTGGTCTGTACCAAGCTTTATCTAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTCGGTGGTCCCACTAGCATTGCTGCTAGACAAAGTGGATCCGGAATTTCTTGGCTTTTTCCATTTGTGGATGGCCATCCACCTTTGGGTTGGCATGACACTGCAGCATATCTTGTTTTACCTGTTCTTCTTATTCTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTCAGACAAATGATCCTACTCAAAAGAATACACTTCTTATTTTTAAGTTTCTTCCACTCATGATCGGCTACTTCTCACTATCTGTGCCATCAGGACTAACAATTTACTGGTTTACGAATAATGTCCTGAGCACAGCTCAACAAATATGGTTGCGCAAATTAGGAGGTGCAAAGCCCGCTGTTAATGAAGATGCTGGTGGAATTATTACGGCCGGACGAGCTAAGAGATCATTTTCTAAGCCCGAAAAGGATGGTGAAAGGTTTACGCAGTTAAAAGAAGAGGAGAAGAAGAAAAAGTTAAGCAAGGCACTGCCCGCAGATGAAGTTCAACCTCTGGCTTCGGCTTCTGTTTCCGATGATGGCTCGGATGTAAAAAACGAGAAGGAACAAGAAGTTACCGAAGAGGCGTATGCATCCAAAGTTCCCCAAGAGGTTCAAAGTTTTTCTAGGGAAAGAAGAAGCAAGCGTTCAAAGCGAAAGCCTGTTGTATGA

Protein sequence

>Msa0548260

MAKTLISSPSFIGTPLPSLHRNNFSPNRTRLYTKVHFSFHQIPPIQSLTHSIDVAGVFARAEGLLYTLADAAVTADAVTSTSTDVAVQKNGGWFGFISDAMEFVLKILKDGLSAVHVPYSYGFAIILLTLIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLILSQYVSMEIMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRKLGGAKPAVNEDAGGIITAGRAKRSFSKPEKDGERFTQLKEEEKKKKLSKALPADEVQPLASASVSDDGSDVKNEKEQEVTEEAYASKVPQEVQSFSRERRSKRSKRKPVV*