AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0269370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269370 MtrunA17_Chr4g0076731 94.183 447 9 5 1 443 1 434 0.0 864
Msa0269370 MtrunA17_Chr5g0417001 47.343 207 94 4 46 241 1 203 5.51e-61 203
Msa0269370 MtrunA17_Chr6g0453131 52.695 167 68 2 52 207 8 174 2.61e-60 201
Msa0269370 MtrunA17_Chr8g0361731 53.049 164 65 3 56 207 11 174 1.76e-59 199
Msa0269370 MtrunA17_Chr5g0442771 43.956 273 118 9 48 290 7 274 2.28e-59 196
Msa0269370 MtrunA17_Chr4g0038751 53.947 152 65 2 58 207 14 162 2.32e-56 188
Msa0269370 MtrunA17_Chr8g0359921 58.000 150 58 2 61 206 16 164 1.72e-55 187
Msa0269370 MtrunA17_Chr2g0318081 56.051 157 62 3 61 213 18 171 2.56e-55 187
Msa0269370 MtrunA17_Chr3g0124761 55.000 160 64 3 61 214 9 166 5.32e-54 182
Msa0269370 MtrunA17_Chr2g0318101 50.299 167 69 2 61 213 17 183 1.05e-53 183
Msa0269370 MtrunA17_Chr4g0047841 47.283 184 71 3 56 213 12 195 1.12e-52 180
Msa0269370 MtrunA17_Chr3g0130731 53.595 153 64 2 61 208 9 159 1.44e-52 178
Msa0269370 MtrunA17_Chr8g0384721 53.247 154 64 2 61 208 9 160 3.56e-52 177
Msa0269370 MtrunA17_Chr6g0481091 52.288 153 68 3 61 209 8 159 1.38e-51 174
Msa0269370 MtrunA17_Chr7g0252971 44.059 202 86 4 61 246 10 200 3.11e-51 176
Msa0269370 MtrunA17_Chr2g0311651 50.279 179 66 5 45 206 14 186 7.90e-51 174
Msa0269370 MtrunA17_Chr2g0311661 50.279 179 65 5 45 206 14 185 9.17e-51 173
Msa0269370 MtrunA17_Chr3g0109821 52.597 154 67 3 61 209 8 160 1.55e-50 181
Msa0269370 MtrunA17_Chr2g0326361 45.745 188 87 5 61 234 16 202 1.81e-50 173
Msa0269370 MtrunA17_Chr2g0309891 51.316 152 68 3 61 207 8 158 4.18e-50 173
Msa0269370 MtrunA17_Chr5g0400461 51.299 154 66 3 61 206 8 160 2.07e-49 171
Msa0269370 MtrunA17_Chr5g0417791 48.810 168 70 5 61 214 5 170 5.93e-49 167
Msa0269370 MtrunA17_Chr5g0433781 52.288 153 68 3 61 209 8 159 1.10e-48 176
Msa0269370 MtrunA17_Chr4g0042561 50.658 152 68 3 61 206 11 161 1.80e-48 167
Msa0269370 MtrunA17_Chr7g0263931 48.795 166 78 2 50 208 2 167 2.29e-48 168
Msa0269370 MtrunA17_Chr3g0139331 49.032 155 78 1 55 208 7 161 8.37e-48 167
Msa0269370 MtrunA17_Chr6g0484441 48.077 156 74 2 61 213 7 158 2.46e-47 165
Msa0269370 MtrunA17_Chr4g0054791 52.632 152 66 3 61 206 8 159 3.67e-47 164
Msa0269370 MtrunA17_Chr4g0056541 48.344 151 74 2 59 206 7 156 6.84e-47 165
Msa0269370 MtrunA17_Chr5g0398971 47.712 153 74 3 59 206 7 158 1.69e-46 164
Msa0269370 MtrunA17_Chr4g0060931 45.856 181 82 5 43 214 4 177 2.04e-46 164
Msa0269370 MtrunA17_Chr4g0018391 47.682 151 75 2 59 206 7 156 3.48e-46 163
Msa0269370 MtrunA17_Chr2g0316971 51.316 152 69 2 61 207 25 176 4.07e-46 164
Msa0269370 MtrunA17_Chr2g0309331 48.026 152 76 1 58 206 9 160 6.60e-46 162
Msa0269370 MtrunA17_Chr8g0364791 46.154 156 75 4 59 208 6 158 6.80e-46 164
Msa0269370 MtrunA17_Chr3g0091921 48.701 154 74 2 58 207 15 167 2.14e-45 159
Msa0269370 MtrunA17_Chr8g0384201 44.872 156 77 4 59 208 6 158 3.67e-45 164
Msa0269370 MtrunA17_Chr5g0428991 52.349 149 66 3 62 206 28 175 5.15e-45 166
Msa0269370 MtrunA17_Chr6g0453451 50.649 154 69 3 61 209 22 173 6.42e-45 159
Msa0269370 MtrunA17_Chr1g0147421 46.012 163 85 3 55 214 23 185 1.23e-44 159
Msa0269370 MtrunA17_Chr1g0201021 50.327 153 71 3 60 208 20 171 1.34e-44 163
Msa0269370 MtrunA17_Chr4g0017921 46.753 154 77 3 59 209 8 159 2.08e-44 158
Msa0269370 MtrunA17_Chr3g0130101 45.570 158 81 3 55 208 3 159 7.27e-44 157
Msa0269370 MtrunA17_Chr5g0405211 45.223 157 82 2 53 206 2 157 8.94e-44 157
Msa0269370 MtrunA17_Chr3g0128151 49.664 149 70 3 62 206 25 172 1.54e-43 161
Msa0269370 MtrunA17_Chr3g0128111 39.286 196 103 4 15 206 9 192 1.64e-43 153
Msa0269370 MtrunA17_Chr1g0200561 44.654 159 84 2 58 213 18 175 3.93e-43 155
Msa0269370 MtrunA17_Chr3g0144271 49.342 152 72 3 61 207 25 176 1.23e-42 155
Msa0269370 MtrunA17_Chr8g0372121 46.711 152 77 2 58 206 5 155 2.08e-42 152
Msa0269370 MtrunA17_Chr7g0253011 47.059 153 74 3 61 206 19 171 1.13e-41 152
Msa0269370 MtrunA17_Chr1g0197351 48.447 161 72 3 59 209 42 201 2.86e-41 153
Msa0269370 MtrunA17_Chr6g0461661 48.252 143 64 2 62 203 21 154 4.82e-41 150
Msa0269370 MtrunA17_Chr1g0183741 41.176 204 99 6 61 246 12 212 1.48e-40 146
Msa0269370 MtrunA17_Chr3g0092671 44.737 152 79 4 61 208 7 157 1.67e-40 152
Msa0269370 MtrunA17_Chr8g0346001 42.593 162 78 3 59 206 15 175 1.86e-40 149
Msa0269370 MtrunA17_Chr2g0312321 37.903 248 128 8 61 292 13 250 2.42e-40 146
Msa0269370 MtrunA17_Chr7g0217721 42.593 162 75 2 62 206 22 182 2.06e-39 145
Msa0269370 MtrunA17_Chr7g0214071 45.614 171 85 4 61 228 17 182 7.57e-39 140
Msa0269370 MtrunA17_Chr7g0261411 47.945 146 71 3 61 204 12 154 9.32e-39 141
Msa0269370 MtrunA17_Chr7g0217711 50.806 124 60 1 62 185 22 144 1.54e-38 137
Msa0269370 MtrunA17_Chr1g0197361 42.105 152 83 4 61 208 10 160 1.71e-38 147
Msa0269370 MtrunA17_Chr4g0026141 39.196 199 104 5 56 237 2 200 2.43e-38 139
Msa0269370 MtrunA17_Chr7g0266701 40.854 164 84 4 57 207 2 165 7.29e-38 138
Msa0269370 MtrunA17_Chr2g0321631 43.478 161 76 4 61 208 6 164 1.91e-37 137
Msa0269370 MtrunA17_Chr8g0385991 46.250 160 74 5 61 210 16 173 3.01e-37 135
Msa0269370 MtrunA17_Chr8g0345671 45.223 157 71 8 54 203 7 155 6.67e-34 131
Msa0269370 MtrunA17_Chr3g0131911 41.463 164 81 4 61 211 16 177 1.66e-32 123
Msa0269370 MtrunA17_Chr8g0345691 42.384 151 79 5 57 203 10 156 2.38e-31 124
Msa0269370 MtrunA17_Chr8g0345711 42.424 132 71 4 56 183 9 139 4.89e-29 112
Msa0269370 MtrunA17_Chr2g0321741 48.113 106 53 2 79 183 12 116 1.58e-28 115
Msa0269370 MtrunA17_Chr3g0113001 38.342 193 78 7 104 270 10 187 3.62e-26 107
Msa0269370 MtrunA17_Chr4g0050701 38.065 155 79 3 61 206 13 159 6.27e-26 103
Msa0269370 MtrunA17_Chr8g0345731 40.602 133 73 4 57 183 22 154 9.18e-24 97.4
Msa0269370 MtrunA17_Chr7g0243371 57.333 75 31 1 112 185 17 91 9.29e-23 93.2
Msa0269370 MtrunA17_Chr8g0345721 36.774 155 64 5 62 183 38 191 1.98e-22 95.1
Msa0269370 MtrunA17_Chr8g0345741 35.948 153 82 6 70 214 2 146 8.73e-21 88.6
Msa0269370 MtrunA17_Chr8g0345701 39.474 152 69 8 60 191 7 155 2.29e-20 88.2
Msa0269370 MtrunA17_Chr8g0384351 36.986 146 73 5 61 206 12 138 4.25e-19 84.7
Msa0269370 MtrunA17_Chr3g0113031 35.795 176 71 7 122 270 3 163 1.26e-17 82.8
Msa0269370 MtrunA17_Chr7g0251661 31.538 130 83 4 57 183 7 133 2.08e-13 67.8
Msa0269370 MtrunA17_Chr7g0251651 31.081 148 93 5 62 205 21 163 3.24e-13 68.2
Msa0269370 MtrunA17_Chr1g0194791 54.167 48 21 1 61 107 48 95 1.03e-12 64.3
Msa0269370 MtrunA17_Chr3g0130321 29.114 158 93 4 61 205 9 160 1.11e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269370 AT5G39820.1 50.000 202 74 5 43 217 2 203 1.21e-62 206
Msa0269370 AT2G17040.1 57.516 153 60 2 57 207 4 153 2.79e-60 198
Msa0269370 AT1G26870.1 47.059 204 96 3 48 239 5 208 1.06e-59 201
Msa0269370 AT2G43000.1 46.875 192 96 3 51 237 10 200 7.36e-58 192
Msa0269370 AT4G27410.2 58.108 148 59 2 61 206 16 162 1.72e-56 189
Msa0269370 AT3G15500.1 58.784 148 58 2 61 206 16 162 4.71e-56 188
Msa0269370 AT1G52890.1 58.784 148 58 2 61 206 16 162 5.55e-55 186
Msa0269370 AT1G61110.1 51.124 178 72 3 56 219 13 189 3.00e-54 184
Msa0269370 AT1G01720.1 55.696 158 62 3 61 212 9 164 8.31e-54 181
Msa0269370 AT3G04070.2 40.996 261 122 9 61 307 12 254 4.24e-53 181
Msa0269370 AT1G77450.1 55.844 154 61 2 61 209 12 163 4.56e-53 178
Msa0269370 AT5G08790.1 52.258 155 65 2 62 209 10 162 4.67e-53 179
Msa0269370 AT5G63790.1 53.247 154 63 2 62 208 53 204 4.06e-52 178
Msa0269370 AT4G27410.3 52.121 165 59 3 61 206 16 179 4.38e-52 178
Msa0269370 AT5G63790.2 53.247 154 63 2 62 208 63 214 5.31e-52 178
Msa0269370 AT3G15510.1 50.000 164 68 2 63 212 21 184 1.15e-51 178
Msa0269370 AT5G17260.1 52.532 158 69 3 61 213 8 164 2.29e-51 180
Msa0269370 AT3G03200.1 52.532 158 69 3 61 213 8 164 5.13e-51 179
Msa0269370 AT3G04070.1 38.628 277 122 9 61 307 12 270 1.00e-50 176
Msa0269370 AT5G46590.1 54.730 148 62 2 61 203 8 155 8.96e-50 171
Msa0269370 AT1G69490.1 50.641 156 66 3 61 208 11 163 1.18e-49 170
Msa0269370 AT3G17730.1 49.673 153 72 3 61 209 8 159 1.53e-49 169
Msa0269370 AT4G17980.1 51.634 153 67 3 61 206 8 160 2.09e-49 169
Msa0269370 AT4G17980.2 51.634 153 67 3 61 206 8 160 2.65e-49 170
Msa0269370 AT3G15170.1 51.948 154 69 2 61 209 22 175 3.36e-48 167
Msa0269370 AT1G65910.1 50.980 153 70 3 61 209 8 159 3.50e-48 174
Msa0269370 AT5G46590.2 56.818 132 55 1 61 190 8 139 1.60e-47 165
Msa0269370 AT5G07680.1 50.877 171 71 5 51 213 10 175 1.99e-47 166
Msa0269370 AT1G32510.1 48.555 173 74 4 61 222 8 176 5.37e-47 164
Msa0269370 AT5G61430.1 50.980 153 68 3 61 208 18 168 5.52e-47 165
Msa0269370 AT1G76420.1 51.333 150 71 2 61 208 24 173 6.01e-47 165
Msa0269370 AT3G10490.1 48.718 156 74 3 59 209 27 181 7.44e-47 162
Msa0269370 AT1G52880.1 52.866 157 61 3 63 206 21 177 9.28e-47 164
Msa0269370 AT1G34180.3 50.980 153 70 3 61 209 18 169 9.49e-47 167
Msa0269370 AT5G07680.2 52.174 161 65 4 61 213 5 161 1.39e-46 163
Msa0269370 AT3G10480.1 48.718 156 74 3 59 209 27 181 1.45e-46 167
Msa0269370 AT1G12260.1 49.669 151 72 2 59 206 7 156 1.58e-46 165
Msa0269370 AT1G12260.2 49.669 151 72 2 59 206 7 156 2.02e-46 164
Msa0269370 AT3G10480.2 49.045 157 71 4 59 209 27 180 2.33e-46 166
Msa0269370 AT3G10490.2 48.718 156 74 3 59 209 27 181 5.23e-46 165
Msa0269370 AT1G34180.1 51.316 152 69 3 61 208 18 168 6.68e-46 167
Msa0269370 AT2G24430.2 47.205 161 83 2 48 206 5 165 8.83e-46 161
Msa0269370 AT2G24430.1 47.205 161 83 2 48 206 5 165 8.83e-46 161
Msa0269370 AT3G04060.1 50.000 150 71 1 61 206 22 171 8.84e-46 162
Msa0269370 AT5G39610.1 49.686 159 75 3 52 206 13 170 1.29e-45 160
Msa0269370 AT3G18400.1 50.331 151 67 3 61 207 7 153 3.10e-45 160
Msa0269370 AT1G33280.1 47.403 154 76 3 59 209 8 159 3.27e-45 159
Msa0269370 AT3G29035.1 44.670 197 92 7 45 230 11 201 6.61e-45 159
Msa0269370 AT1G62700.1 49.007 151 73 2 59 206 7 156 8.80e-45 160
Msa0269370 AT1G62700.2 49.007 151 73 2 59 206 7 156 8.80e-45 160
Msa0269370 AT1G34190.1 50.000 152 71 3 61 208 18 168 9.54e-45 164
Msa0269370 AT1G54330.1 52.027 148 67 3 61 206 8 153 1.94e-44 157
Msa0269370 AT1G79580.3 49.007 151 73 2 59 206 17 166 2.34e-44 159
Msa0269370 AT1G79580.5 49.007 151 73 2 59 206 17 166 2.34e-44 159
Msa0269370 AT1G79580.4 49.007 151 73 2 59 206 17 166 2.34e-44 159
Msa0269370 AT1G79580.2 49.007 151 73 2 59 206 17 166 2.34e-44 159
Msa0269370 AT1G79580.1 49.007 151 73 2 59 206 17 166 2.34e-44 159
Msa0269370 AT4G35580.1 51.678 149 67 3 62 206 12 159 3.05e-44 162
Msa0269370 AT4G35580.3 51.678 149 67 3 62 206 12 159 3.40e-44 162
Msa0269370 AT4G35580.2 51.678 149 67 3 62 206 12 159 3.63e-44 162
Msa0269370 AT5G24590.2 44.025 159 85 2 62 216 16 174 4.24e-44 160
Msa0269370 AT1G34180.4 46.667 165 71 3 61 209 18 181 6.02e-44 160
Msa0269370 AT5G53950.1 49.689 161 74 3 53 206 9 169 6.49e-44 158
Msa0269370 AT5G18270.2 48.667 150 73 1 61 206 23 172 1.53e-43 156
Msa0269370 AT1G71930.2 45.638 149 77 2 61 206 11 158 2.41e-43 155
Msa0269370 AT1G71930.1 45.638 149 77 2 61 206 11 158 2.41e-43 155
Msa0269370 AT4G10350.1 45.513 156 79 3 59 209 9 163 2.59e-43 155
Msa0269370 AT1G34180.2 46.951 164 70 3 61 208 18 180 3.03e-43 160
Msa0269370 AT4G36160.1 47.682 151 75 2 59 206 10 159 3.04e-43 156
Msa0269370 AT4G36160.3 47.682 151 75 2 59 206 10 159 3.04e-43 156
Msa0269370 AT5G18270.1 48.667 150 73 1 61 206 23 172 3.20e-43 155
Msa0269370 AT1G33060.2 48.993 149 71 3 62 206 27 174 3.22e-43 161
Msa0269370 AT1G33060.1 48.993 149 71 3 62 206 27 174 3.35e-43 161
Msa0269370 AT4G36160.2 47.682 151 75 2 59 206 14 163 3.49e-43 156
Msa0269370 AT5G04410.1 46.452 155 76 4 59 208 9 161 3.61e-43 160
Msa0269370 AT2G18060.3 46.358 151 77 2 59 206 9 158 5.23e-43 155
Msa0269370 AT2G18060.1 46.358 151 77 2 59 206 9 158 5.23e-43 155
Msa0269370 AT3G10500.1 44.805 154 80 3 59 208 9 161 6.96e-43 159
Msa0269370 AT3G49530.2 44.295 149 79 2 62 206 16 164 1.20e-41 152
Msa0269370 AT2G46770.1 43.195 169 77 5 59 209 16 183 1.58e-41 151
Msa0269370 AT5G62380.2 43.210 162 88 2 61 219 9 169 1.71e-41 150
Msa0269370 AT5G62380.1 43.210 162 88 2 61 219 9 169 1.71e-41 150
Msa0269370 AT3G49530.1 43.478 161 83 3 62 214 16 176 2.61e-41 153
Msa0269370 AT3G61910.1 50.000 132 62 2 59 187 11 141 2.96e-41 150
Msa0269370 AT3G12910.1 44.134 179 81 4 47 207 9 186 8.33e-41 147
Msa0269370 AT5G66300.1 44.737 152 79 3 59 206 12 162 1.05e-40 147
Msa0269370 AT3G12977.1 46.309 149 76 2 61 206 20 167 1.13e-40 147
Msa0269370 AT3G10480.3 41.270 189 72 4 59 209 27 214 1.33e-40 152
Msa0269370 AT1G32770.1 40.571 175 85 4 59 215 16 189 2.61e-40 148
Msa0269370 AT1G56010.2 44.079 152 78 3 61 206 21 171 5.38e-40 146
Msa0269370 AT2G33480.2 50.000 144 68 2 61 204 17 156 5.05e-39 142
Msa0269370 AT5G13180.1 51.316 152 67 4 61 208 16 164 9.71e-39 140
Msa0269370 AT2G33480.1 50.685 146 66 3 61 204 17 158 1.35e-38 140
Msa0269370 AT4G28530.1 44.242 165 71 4 61 207 12 173 3.85e-38 142
Msa0269370 AT5G64060.1 34.855 241 135 6 59 295 6 228 7.06e-38 141
Msa0269370 AT5G09330.5 42.208 154 84 3 59 208 6 158 1.42e-37 143
Msa0269370 AT5G09330.2 42.208 154 84 3 59 208 6 158 1.42e-37 143
Msa0269370 AT5G09330.4 42.208 154 84 3 59 208 6 158 1.42e-37 143
Msa0269370 AT5G09330.3 42.208 154 84 3 59 208 6 158 1.42e-37 143
Msa0269370 AT5G09330.1 42.208 154 84 3 59 208 6 158 1.42e-37 143
Msa0269370 AT2G27300.1 41.830 153 76 4 59 207 14 157 1.92e-36 137
Msa0269370 AT5G22380.1 45.679 162 78 4 57 208 3 164 2.01e-36 134
Msa0269370 AT3G44350.2 40.099 202 96 7 62 240 8 207 6.36e-36 133
Msa0269370 AT5G22290.1 44.604 139 75 2 46 183 8 145 1.35e-35 134
Msa0269370 AT1G32870.1 46.875 160 76 4 55 208 6 162 2.48e-35 137
Msa0269370 AT1G32870.2 46.875 160 76 4 55 208 6 162 2.69e-35 137
Msa0269370 AT1G32870.3 46.875 160 76 4 55 208 42 198 6.05e-35 137
Msa0269370 AT3G44290.2 44.800 125 67 2 60 183 15 138 3.89e-34 127
Msa0269370 AT3G44290.1 44.800 125 67 2 60 183 15 138 2.60e-33 128
Msa0269370 AT3G44350.1 47.692 130 59 3 62 184 8 135 3.33e-32 120
Msa0269370 AT5G04395.1 39.583 144 72 2 61 189 30 173 1.11e-31 120
Msa0269370 AT4G01550.1 41.104 163 82 6 60 214 5 161 5.38e-30 121
Msa0269370 AT5G61430.2 50.467 107 46 3 107 208 1 105 9.73e-29 114
Msa0269370 AT3G12977.2 50.000 102 47 2 108 206 14 114 4.42e-27 108
Msa0269370 AT1G56010.1 47.619 105 49 2 107 206 1 104 4.75e-27 109
Msa0269370 AT4G01520.1 40.881 159 78 7 62 210 7 159 6.57e-26 107
Msa0269370 AT4G01540.3 41.509 159 77 7 62 210 7 159 2.00e-25 108
Msa0269370 AT4G01540.4 41.509 159 77 7 62 210 7 159 2.99e-25 107
Msa0269370 AT4G01540.1 41.509 159 77 7 62 210 7 159 4.76e-25 107
Msa0269370 AT5G64530.2 44.531 128 56 5 61 186 5 119 4.85e-25 100
Msa0269370 AT5G64530.1 44.531 128 56 5 61 186 5 119 5.22e-25 101
Msa0269370 AT4G01540.2 41.509 159 77 7 62 210 7 159 5.27e-25 107
Msa0269370 AT4G10350.2 43.119 109 59 2 103 209 9 116 4.78e-24 102
Msa0269370 AT4G28530.2 42.636 129 51 4 61 169 12 137 1.38e-23 100
Msa0269370 AT2G43000.2 41.803 122 65 3 121 237 2 122 2.89e-23 97.4
Msa0269370 AT2G33480.3 50.526 95 44 2 112 204 8 101 1.23e-22 95.9
Msa0269370 AT1G02250.1 41.406 128 66 5 62 183 6 130 9.54e-22 96.7
Msa0269370 AT1G02230.1 36.667 150 80 7 62 203 6 148 1.90e-21 95.9
Msa0269370 AT3G04420.2 40.476 126 70 3 62 183 6 130 3.62e-21 93.6
Msa0269370 AT3G04420.1 40.476 126 70 3 62 183 6 130 3.96e-21 94.4
Msa0269370 AT3G10490.4 50.617 81 36 2 132 209 2 81 1.96e-19 89.7
Msa0269370 AT3G10490.3 50.617 81 36 2 132 209 2 81 1.96e-19 89.7
Msa0269370 AT1G02220.1 36.076 158 82 6 62 211 6 152 3.27e-18 86.7
Msa0269370 AT1G01010.1 36.620 142 74 7 62 189 6 145 3.64e-18 86.7
Msa0269370 AT5G50820.1 35.000 160 74 7 61 205 19 163 1.37e-14 72.4
Msa0269370 AT3G56530.1 30.405 148 97 4 61 204 54 199 1.86e-14 74.3
Msa0269370 AT3G04430.1 39.252 107 62 3 65 169 6 111 3.12e-14 71.6
Msa0269370 AT2G18060.2 44.286 70 38 1 137 206 2 70 1.84e-13 70.9
Msa0269370 AT5G14000.1 31.544 149 96 4 62 208 18 162 6.72e-13 68.2
Msa0269370 AT5G14000.2 32.540 126 80 3 62 185 18 140 1.10e-11 63.2

Find 127 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTAACAACTTCTGGTTAT+TGG 0.211019 2_3:+135534 Msa0269370:CDS
GATGATGATGGTCGTGTAAT+TGG 0.239615 2_3:-136563 None:intergenic
TTCTAATTGCTCTGATTATT+CGG 0.257989 2_3:+137370 Msa0269370:three_prime_UTR
TAAGCAGCAAAATGAAATAT+TGG 0.264868 2_3:+136622 Msa0269370:CDS
ACTGAAAACTTTCGTTCAAT+TGG 0.296485 2_3:+135587 Msa0269370:CDS
CCTAATCGTGTAACAACTTC+TGG 0.308486 2_3:+135527 Msa0269370:CDS
CCAGAAGTTGTTACACGATT+AGG 0.317297 2_3:-135527 None:intergenic
ATATCGTTCGGTTTCATGTT+GGG 0.335622 2_3:-135693 None:intergenic
AAGGAGGTTGGAAATTGATT+TGG 0.344511 2_3:-137133 None:intergenic
TGAAGCTGAGACTGGGAAAA+TGG 0.347823 2_3:-136936 None:intergenic
GCTGCCGCTGAAGCTGAGAC+TGG 0.355613 2_3:-136944 None:intergenic
TGCATTATATAGTAGGTAGT+AGG 0.357995 2_3:-137287 None:intergenic
TATGACCCTTGGGAACTTCC+TGG 0.368869 2_3:+135093 Msa0269370:CDS
GTAGACAAATGATTGGGATT+TGG 0.373594 2_3:-137088 None:intergenic
CAACTGGTTCGGATGCCTTT+GGG 0.374805 2_3:-135647 None:intergenic
CCAACTGGTTCGGATGCCTT+TGG 0.377419 2_3:-135648 None:intergenic
AAGCAGCAAAATGAAATATT+GGG 0.379687 2_3:+136623 Msa0269370:CDS
TATATATGTTATTGAAATCA+TGG 0.380572 2_3:-137401 None:intergenic
ATCTTTATCGCTATGACCCT+TGG 0.382909 2_3:+135082 Msa0269370:CDS
ATGTATTTGCATTATATAGT+AGG 0.386019 2_3:-137294 None:intergenic
TGATCACATAGTTAACAAAA+TGG 0.392091 2_3:+136685 Msa0269370:CDS
GTATAAAAGAGGAGAGAAAA+GGG 0.392745 2_3:+134747 None:intergenic
TGTTAGTTAGTTAGAGAGAG+TGG 0.399180 2_3:+134776 Msa0269370:five_prime_UTR
AAGCTCATGCTGCTCATGTT+AGG 0.402422 2_3:-134838 None:intergenic
TCTTCTGAACGGTAATTAGT+AGG 0.410368 2_3:-136785 None:intergenic
GATCATGTCACAACCACTCT+TGG 0.411521 2_3:+136734 Msa0269370:CDS
ATGTGATCATCAATTGTCTT+TGG 0.414276 2_3:-136671 None:intergenic
ATGATGATGGTCGTGTAATT+GGG 0.415001 2_3:-136562 None:intergenic
GAGGTGTTGTTACTACTGTT+GGG 0.428986 2_3:-137205 None:intergenic
TGCAGCACTGGTAGCAGTAT+TGG 0.434071 2_3:-136981 None:intergenic
TTGGGGTGATTATGATCCTC+AGG 0.436862 2_3:-137187 None:intergenic
CAGCAATGTAGACAAATGAT+TGG 0.439526 2_3:-137095 None:intergenic
TCTGGTTATTGGAAAGCAAC+AGG 0.440994 2_3:+135545 Msa0269370:CDS
GATATCGTTCGGTTTCATGT+TGG 0.441960 2_3:-135694 None:intergenic
AGTTGATAACTGAAATCAAC+TGG 0.445321 2_3:-137332 None:intergenic
TTGGGAATGGGATTTGTTGT+TGG 0.446359 2_3:+136641 Msa0269370:CDS
TGATGATGGATGATCTCAAT+AGG 0.454191 2_3:+137005 Msa0269370:CDS
GCAAAATGAAATATTGGGAA+TGG 0.458597 2_3:+136628 Msa0269370:CDS
GGAGGTGTTGTTACTACTGT+TGG 0.465590 2_3:-137206 None:intergenic
CTACCTTCGCCGTAAGGTCG+AGG 0.466198 2_3:+135023 Msa0269370:CDS
GCATTATATAGTAGGTAGTA+GGG 0.467242 2_3:-137286 None:intergenic
CAAAATGAAATATTGGGAAT+GGG 0.469377 2_3:+136629 Msa0269370:CDS
GAGCATGACGTGGTTATGCC+AGG 0.470442 2_3:+134961 Msa0269370:CDS
TCTCTGACCGACTGTGGGAC+TGG 0.472209 2_3:+137155 Msa0269370:CDS
TGATTATGATCCTCAGGGAT+TGG 0.472665 2_3:-137181 None:intergenic
ATACTCATTCATAATCCAAC+TGG 0.474720 2_3:-135663 None:intergenic
TTATTGAAATCATGGGATAC+AGG 0.479933 2_3:-137393 None:intergenic
CATTCATAATCCAACTGGTT+CGG 0.480582 2_3:-135658 None:intergenic
TCTTTATCGCTATGACCCTT+GGG 0.483331 2_3:+135083 Msa0269370:CDS
TTCAGTTATCAACTTTATGT+AGG 0.484690 2_3:+137341 Msa0269370:three_prime_UTR
AGGAGGAGTATTGCTGTACT+TGG 0.484755 2_3:-136762 None:intergenic
CAAGCTCTTCTTCAGTTGGA+TGG 0.486659 2_3:-134993 None:intergenic
AGTAATTAGTGATTACTTGA+AGG 0.490931 2_3:-137227 None:intergenic
ATCATGTCACAACCACTCTT+GGG 0.491534 2_3:+136735 Msa0269370:CDS
GGCGCTGCCGCCACCACAAG+CGG 0.493139 2_3:-136915 None:intergenic
AGAGTTCTACCTTCGCCGTA+AGG 0.493247 2_3:+135017 Msa0269370:CDS
GATTTGGATGATTGAGATGT+GGG 0.497103 2_3:-137072 None:intergenic
TTCCCTCGACCTTACGGCGA+AGG 0.497938 2_3:-135026 None:intergenic
CTGCCGCTGAAGCTGAGACT+GGG 0.499254 2_3:-136943 None:intergenic
GGAAATTGATTTGGTAACAT+TGG 0.503521 2_3:-137124 None:intergenic
TATCGTTCGGTTTCATGTTG+GGG 0.505358 2_3:-135692 None:intergenic
TTAGTCTCCGCTTGTGGTGG+CGG 0.506486 2_3:+136908 Msa0269370:CDS
TCTACAAGCTCTTCTTCAGT+TGG 0.506937 2_3:-134997 None:intergenic
AGTTAGTTAGAGAGAGTGGA+TGG 0.509005 2_3:+134780 Msa0269370:exon
TGAAACCGAACGATATCAAA+AGG 0.509230 2_3:+135700 Msa0269370:CDS
ATCCATCATCATTGCAGCAC+TGG 0.512112 2_3:-136993 None:intergenic
TTTGGCAGCAATCGGAGAGA+AGG 0.516877 2_3:+135454 Msa0269370:CDS
GGAAAGCAACAGGAGCAGAT+AGG 0.517048 2_3:+135555 Msa0269370:CDS
AGCAATGTAGACAAATGATT+GGG 0.519527 2_3:-137094 None:intergenic
TGAGCAGCTTTGGCAGCAAT+CGG 0.520334 2_3:+135446 Msa0269370:intron
GGGTGAGATATCCCTATGTC+GGG 0.523444 2_3:+136490 Msa0269370:intron
TACCGTTCAGAAGATGAAGA+AGG 0.528026 2_3:+136794 Msa0269370:CDS
CCTCCTTCTCTGACCGACTG+TGG 0.530397 2_3:+137149 Msa0269370:CDS
CCACAGTCGGTCAGAGAAGG+AGG 0.546229 2_3:-137149 None:intergenic
TGGGAGACAACGAGGGAGGG+AGG 0.546963 2_3:-136543 None:intergenic
GCATATTGTACTAGTTGCCT+AGG 0.547334 2_3:-136866 None:intergenic
TGGATGGCAATAGCAGCAGC+AGG 0.551609 2_3:+134796 Msa0269370:exon
GTCCCACAGTCGGTCAGAGA+AGG 0.552251 2_3:-137152 None:intergenic
TACCTTCGCCGTAAGGTCGA+GGG 0.555355 2_3:+135024 Msa0269370:CDS
ATATATGTTATTGAAATCAT+GGG 0.557506 2_3:-137400 None:intergenic
GGGAGACAACGAGGGAGGGA+GGG 0.560158 2_3:-136542 None:intergenic
AGTCGGTCAGAGAAGGAGGT+TGG 0.561135 2_3:-137145 None:intergenic
TACCAGTGCTGCAATGATGA+TGG 0.562350 2_3:+136991 Msa0269370:CDS
CTCCTTCTCTGACCGACTGT+GGG 0.564074 2_3:+137150 Msa0269370:CDS
CTAGTACAATATGCAGCTGC+GGG 0.565924 2_3:+136875 Msa0269370:CDS
ATCCTTCTTCATCTTCTGAA+CGG 0.566170 2_3:-136796 None:intergenic
TGGGGTGATTATGATCCTCA+GGG 0.566445 2_3:-137186 None:intergenic
CACATAGTTAACAAAATGGA+AGG 0.567229 2_3:+136689 Msa0269370:CDS
GAACGGTAATTAGTAGGAGG+AGG 0.572179 2_3:-136779 None:intergenic
AGGGTGAGATATCCCTATGT+CGG 0.573960 2_3:+136489 Msa0269370:intron
TATATACCAGGAAGTTCCCA+AGG 0.575847 2_3:-135099 None:intergenic
GGATTTGGATGATTGAGATG+TGG 0.580035 2_3:-137073 None:intergenic
AATTAGTGATTACTTGAAGG+AGG 0.582479 2_3:-137224 None:intergenic
ATGAGCTTGAGTCACGAAGA+TGG 0.587554 2_3:+134853 Msa0269370:CDS
CTGTTAGTCTCCGCTTGTGG+TGG 0.588546 2_3:+136905 Msa0269370:CDS
TCTCTTGTATACCCGACATA+GGG 0.588580 2_3:-136501 None:intergenic
CTCTCTTGTATACCCGACAT+AGG 0.590093 2_3:-136502 None:intergenic
CCAAAGGCATCCGAACCAGT+TGG 0.592737 2_3:+135648 Msa0269370:CDS
CGAGATAGAAAGTATCGAAA+CGG 0.593685 2_3:+135497 Msa0269370:CDS
AGCATGACGTGGTTATGCCA+GGG 0.596795 2_3:+134962 Msa0269370:CDS
TATAAAAGAGGAGAGAAAAG+GGG 0.597062 2_3:+134748 None:intergenic
TGTCGGGTATACAAGAGAGC+AGG 0.602519 2_3:+136506 Msa0269370:CDS
AATTGGGAGACAACGAGGGA+GGG 0.605068 2_3:-136546 None:intergenic
TTTCGATACTTTCTATCTCG+AGG 0.612931 2_3:-135494 None:intergenic
CGACCATCATCATCATCAAG+AGG 0.614625 2_3:+136572 Msa0269370:CDS
TCTAACGATAATAGTAACAA+AGG 0.615780 2_3:+134889 Msa0269370:CDS
TCTCTGTTAGTCTCCGCTTG+TGG 0.618457 2_3:+136902 Msa0269370:CDS
TTTCCCAGTCTCAGCTTCAG+CGG 0.622682 2_3:+136940 Msa0269370:CDS
TCTGAACGGTAATTAGTAGG+AGG 0.623921 2_3:-136782 None:intergenic
ACTAGTACAATATGCAGCTG+CGG 0.627166 2_3:+136874 Msa0269370:CDS
GTACCTCTTGATGATGATGA+TGG 0.633918 2_3:-136575 None:intergenic
AGGTGTTGTTACTACTGTTG+GGG 0.635388 2_3:-137204 None:intergenic
CAGCAATCGGAGAGAAGGAG+TGG 0.646393 2_3:+135459 Msa0269370:CDS
AGCAGCAGCAACATCAACCT+AGG 0.647554 2_3:+136849 Msa0269370:CDS
TATTCTGGAAAAGCTCCCAA+AGG 0.650827 2_3:+135632 Msa0269370:CDS
AAAATGGAAGGAAGCAGTAG+CGG 0.650928 2_3:+136701 Msa0269370:CDS
ATGGCAATAGCAGCAGCAGG+AGG 0.651608 2_3:+134799 Msa0269370:CDS
GTTGGATGGAAACGAAACCC+TGG 0.652572 2_3:-134979 None:intergenic
TAATTGGGAGACAACGAGGG+AGG 0.654012 2_3:-136547 None:intergenic
CGTGTAATTGGGAGACAACG+AGG 0.654137 2_3:-136551 None:intergenic
TTGGATTCCAGTCCCACAGT+CGG 0.664258 2_3:-137162 None:intergenic
ATGGAAGGAAGCAGTAGCGG+CGG 0.686399 2_3:+136704 Msa0269370:CDS
GTACTTGGAAAGCCCAAGAG+TGG 0.699274 2_3:-136747 None:intergenic
GTGTAATTGGGAGACAACGA+GGG 0.701719 2_3:-136550 None:intergenic
ATATACCAGGAAGTTCCCAA+GGG 0.721658 2_3:-135098 None:intergenic
TGATGATCACGAGCATGACG+TGG 0.732266 2_3:+134951 Msa0269370:CDS
GGACTGGAATCCAATCCCTG+AGG 0.753349 2_3:+137171 Msa0269370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATAAATATATACC+AGG - chr2_3:135114-135133 None:intergenic 10.0%
!! TTATATTATTAAATCAAAGA+GGG - chr2_3:135245-135264 None:intergenic 10.0%
!! ATTATATTATTAAATCAAAG+AGG - chr2_3:135246-135265 None:intergenic 10.0%
!!! TTTTTGATAAATAAATATCT+TGG + chr2_3:135275-135294 Msa0269370:intron 10.0%
!! ATATATATATATATGCTATA+TGG - chr2_3:136070-136089 None:intergenic 10.0%
!!! GTTGTATATGAATATATTTT+AGG - chr2_3:136193-136212 None:intergenic 15.0%
!! TCAAATTCAAAATTATTGTA+AGG - chr2_3:136454-136473 None:intergenic 15.0%
!! TTTGAATTTGAATTTGAATT+AGG + chr2_3:136463-136482 Msa0269370:intron 15.0%
!! TTGAATTTGAATTTGAATTA+GGG + chr2_3:136470-136489 Msa0269370:intron 15.0%
!! ATATATGTTATTGAAATCAT+GGG - chr2_3:137403-137422 None:intergenic 15.0%
!! TATATATGTTATTGAAATCA+TGG - chr2_3:137404-137423 None:intergenic 15.0%
!! AATATGAAGCAAATAAGAAA+GGG - chr2_3:135303-135322 None:intergenic 20.0%
!! AAATATGAAGCAAATAAGAA+AGG - chr2_3:135304-135323 None:intergenic 20.0%
!!! AATATAGCTCTTTAAAACTA+GGG - chr2_3:135895-135914 None:intergenic 20.0%
!!! TAATATAGCTCTTTAAAACT+AGG - chr2_3:135896-135915 None:intergenic 20.0%
!!! TATATTATGCATCTTGATTT+TGG + chr2_3:135916-135935 Msa0269370:intron 20.0%
!!! ATATTATGCATCTTGATTTT+GGG + chr2_3:135917-135936 Msa0269370:intron 20.0%
!! GTGTGTATACTATATATTTA+TGG - chr2_3:135959-135978 None:intergenic 20.0%
!!! GAAAGGAATTAATTAATTTG+TGG - chr2_3:136304-136323 None:intergenic 20.0%
!! ATGTATTTGCATTATATAGT+AGG - chr2_3:137297-137316 None:intergenic 20.0%
! TCTAACGATAATAGTAACAA+AGG + chr2_3:134889-134908 Msa0269370:CDS 25.0%
! TTATTAAATCAAAGAGGGAT+GGG - chr2_3:135240-135259 None:intergenic 25.0%
! ATTATTAAATCAAAGAGGGA+TGG - chr2_3:135241-135260 None:intergenic 25.0%
!!! TATGTGATTGAATTTTGATG+TGG + chr2_3:135395-135414 Msa0269370:intron 25.0%
!! TTTTCCAGAATAGAAAACTA+GGG - chr2_3:135624-135643 None:intergenic 25.0%
!! ATATACCTTTTGATATCGTT+CGG - chr2_3:135708-135727 None:intergenic 25.0%
!!! CATTACTGATTTTTCTTTCA+TGG + chr2_3:135815-135834 Msa0269370:intron 25.0%
!!! TTTTAAAACCAAGAAAGACA+CGG - chr2_3:135865-135884 None:intergenic 25.0%
! ATATATATATGCTATATGGC+TGG - chr2_3:136066-136085 None:intergenic 25.0%
!! ATGAAATGTATGCCAAATTT+TGG + chr2_3:136426-136445 Msa0269370:intron 25.0%
! TATTGTAAGGATCCAAAATT+TGG - chr2_3:136441-136460 None:intergenic 25.0%
! TAAGCAGCAAAATGAAATAT+TGG + chr2_3:136622-136641 Msa0269370:CDS 25.0%
! AAGCAGCAAAATGAAATATT+GGG + chr2_3:136623-136642 Msa0269370:CDS 25.0%
! CAAAATGAAATATTGGGAAT+GGG + chr2_3:136629-136648 Msa0269370:CDS 25.0%
! TGATCACATAGTTAACAAAA+TGG + chr2_3:136685-136704 Msa0269370:CDS 25.0%
! AGTAATTAGTGATTACTTGA+AGG - chr2_3:137230-137249 None:intergenic 25.0%
! TTCAGTTATCAACTTTATGT+AGG + chr2_3:137341-137360 Msa0269370:three_prime_UTR 25.0%
! TTCTAATTGCTCTGATTATT+CGG + chr2_3:137370-137389 Msa0269370:three_prime_UTR 25.0%
ACTGAAAACTTTCGTTCAAT+TGG + chr2_3:135587-135606 Msa0269370:CDS 30.0%
!! AAAACCCTAGTTTTCTATTC+TGG + chr2_3:135617-135636 Msa0269370:CDS 30.0%
! CTTTTCCAGAATAGAAAACT+AGG - chr2_3:135625-135644 None:intergenic 30.0%
ATACTCATTCATAATCCAAC+TGG - chr2_3:135666-135685 None:intergenic 30.0%
! GCAGTTCTATTTGGTAATTA+AGG - chr2_3:135778-135797 None:intergenic 30.0%
GCAAAATGAAATATTGGGAA+TGG + chr2_3:136628-136647 Msa0269370:CDS 30.0%
ATGTGATCATCAATTGTCTT+TGG - chr2_3:136674-136693 None:intergenic 30.0%
CACATAGTTAACAAAATGGA+AGG + chr2_3:136689-136708 Msa0269370:CDS 30.0%
AGCAATGTAGACAAATGATT+GGG - chr2_3:137097-137116 None:intergenic 30.0%
!! GGAAATTGATTTGGTAACAT+TGG - chr2_3:137127-137146 None:intergenic 30.0%
AATTAGTGATTACTTGAAGG+AGG - chr2_3:137227-137246 None:intergenic 30.0%
GCATTATATAGTAGGTAGTA+GGG - chr2_3:137289-137308 None:intergenic 30.0%
TGCATTATATAGTAGGTAGT+AGG - chr2_3:137290-137309 None:intergenic 30.0%
!! AGTTGATAACTGAAATCAAC+TGG - chr2_3:137335-137354 None:intergenic 30.0%
TTATTGAAATCATGGGATAC+AGG - chr2_3:137396-137415 None:intergenic 30.0%
TGTTAGTTAGTTAGAGAGAG+TGG + chr2_3:134776-134795 Msa0269370:five_prime_UTR 35.0%
!! TCCAGAATTGCTTTAGGAAA+GGG - chr2_3:135201-135220 None:intergenic 35.0%
!! TTCCAGAATTGCTTTAGGAA+AGG - chr2_3:135202-135221 None:intergenic 35.0%
AGGGATGGGAACAAAAAAAA+GGG - chr2_3:135226-135245 None:intergenic 35.0%
! TATATGATGATGAGCAGCTT+TGG + chr2_3:135436-135455 Msa0269370:intron 35.0%
TTTCGATACTTTCTATCTCG+AGG - chr2_3:135497-135516 None:intergenic 35.0%
!! CGAGATAGAAAGTATCGAAA+CGG + chr2_3:135497-135516 Msa0269370:CDS 35.0%
! GTGTAACAACTTCTGGTTAT+TGG + chr2_3:135534-135553 Msa0269370:CDS 35.0%
CATTCATAATCCAACTGGTT+CGG - chr2_3:135661-135680 None:intergenic 35.0%
ATATCGTTCGGTTTCATGTT+GGG - chr2_3:135696-135715 None:intergenic 35.0%
TGAAACCGAACGATATCAAA+AGG + chr2_3:135700-135719 Msa0269370:CDS 35.0%
TATTGAAACCGTGTCTTTCT+TGG + chr2_3:135854-135873 Msa0269370:intron 35.0%
! CTAGCTAGCTACTATTGTTT+TGG - chr2_3:136023-136042 None:intergenic 35.0%
TATATATGCTATATGGCTGG+TGG - chr2_3:136063-136082 None:intergenic 35.0%
GAGAGGGAATTAATCACAAA+CGG - chr2_3:136224-136243 None:intergenic 35.0%
AAATGATCACGAGAGATGAA+AGG - chr2_3:136321-136340 None:intergenic 35.0%
!! ATGATGATGGTCGTGTAATT+GGG - chr2_3:136565-136584 None:intergenic 35.0%
TCTTCTGAACGGTAATTAGT+AGG - chr2_3:136788-136807 None:intergenic 35.0%
ATCCTTCTTCATCTTCTGAA+CGG - chr2_3:136799-136818 None:intergenic 35.0%
!! TGATGATGGATGATCTCAAT+AGG + chr2_3:137005-137024 Msa0269370:CDS 35.0%
GATTTGGATGATTGAGATGT+GGG - chr2_3:137075-137094 None:intergenic 35.0%
GTAGACAAATGATTGGGATT+TGG - chr2_3:137091-137110 None:intergenic 35.0%
CAGCAATGTAGACAAATGAT+TGG - chr2_3:137098-137117 None:intergenic 35.0%
AAGGAGGTTGGAAATTGATT+TGG - chr2_3:137136-137155 None:intergenic 35.0%
AGTTAGTTAGAGAGAGTGGA+TGG + chr2_3:134780-134799 Msa0269370:exon 40.0%
TCTACAAGCTCTTCTTCAGT+TGG - chr2_3:135000-135019 None:intergenic 40.0%
ATCTTTATCGCTATGACCCT+TGG + chr2_3:135082-135101 Msa0269370:CDS 40.0%
TCTTTATCGCTATGACCCTT+GGG + chr2_3:135083-135102 Msa0269370:CDS 40.0%
ATATACCAGGAAGTTCCCAA+GGG - chr2_3:135101-135120 None:intergenic 40.0%
TATATACCAGGAAGTTCCCA+AGG - chr2_3:135102-135121 None:intergenic 40.0%
!! CCAGAATTGCTTTAGGAAAG+GGG - chr2_3:135200-135219 None:intergenic 40.0%
AGGGTTTCCAGAATTGCTTT+AGG - chr2_3:135207-135226 None:intergenic 40.0%
GAGGGATGGGAACAAAAAAA+AGG - chr2_3:135227-135246 None:intergenic 40.0%
CCAGAAGTTGTTACACGATT+AGG - chr2_3:135530-135549 None:intergenic 40.0%
CCTAATCGTGTAACAACTTC+TGG + chr2_3:135527-135546 Msa0269370:CDS 40.0%
TCTGGTTATTGGAAAGCAAC+AGG + chr2_3:135545-135564 Msa0269370:CDS 40.0%
! TATTCTGGAAAAGCTCCCAA+AGG + chr2_3:135632-135651 Msa0269370:CDS 40.0%
TATCGTTCGGTTTCATGTTG+GGG - chr2_3:135695-135714 None:intergenic 40.0%
GATATCGTTCGGTTTCATGT+TGG - chr2_3:135697-135716 None:intergenic 40.0%
CCATCAAGAGCAGTTCTATT+TGG - chr2_3:135787-135806 None:intergenic 40.0%
CCAAATAGAACTGCTCTTGA+TGG + chr2_3:135784-135803 Msa0269370:intron 40.0%
!! GTTTTGGTGTGCTATAGCTT+TGG - chr2_3:136007-136026 None:intergenic 40.0%
TTAGAAGCCAAGAATGCAAG+AGG + chr2_3:136103-136122 Msa0269370:intron 40.0%
TAGAAGCCAAGAATGCAAGA+GGG + chr2_3:136104-136123 Msa0269370:intron 40.0%
GTATGTATGAGAGAGAGAGA+GGG - chr2_3:136240-136259 None:intergenic 40.0%
TGTATGTATGAGAGAGAGAG+AGG - chr2_3:136241-136260 None:intergenic 40.0%
!! TCATTTTGATAGTCCAGTGC+AGG + chr2_3:136335-136354 Msa0269370:intron 40.0%
TCTCTTGTATACCCGACATA+GGG - chr2_3:136504-136523 None:intergenic 40.0%
!! GATGATGATGGTCGTGTAAT+TGG - chr2_3:136566-136585 None:intergenic 40.0%
!! GTACCTCTTGATGATGATGA+TGG - chr2_3:136578-136597 None:intergenic 40.0%
!! TTGGGAATGGGATTTGTTGT+TGG + chr2_3:136641-136660 Msa0269370:CDS 40.0%
AAAATGGAAGGAAGCAGTAG+CGG + chr2_3:136701-136720 Msa0269370:CDS 40.0%
ATCATGTCACAACCACTCTT+GGG + chr2_3:136735-136754 Msa0269370:CDS 40.0%
TCTGAACGGTAATTAGTAGG+AGG - chr2_3:136785-136804 None:intergenic 40.0%
TACCGTTCAGAAGATGAAGA+AGG + chr2_3:136794-136813 Msa0269370:CDS 40.0%
GCATATTGTACTAGTTGCCT+AGG - chr2_3:136869-136888 None:intergenic 40.0%
ACTAGTACAATATGCAGCTG+CGG + chr2_3:136874-136893 Msa0269370:CDS 40.0%
GGATTTGGATGATTGAGATG+TGG - chr2_3:137076-137095 None:intergenic 40.0%
TGATTATGATCCTCAGGGAT+TGG - chr2_3:137184-137203 None:intergenic 40.0%
!! AGGTGTTGTTACTACTGTTG+GGG - chr2_3:137207-137226 None:intergenic 40.0%
!! GAGGTGTTGTTACTACTGTT+GGG - chr2_3:137208-137227 None:intergenic 40.0%
AAGCTCATGCTGCTCATGTT+AGG - chr2_3:134841-134860 None:intergenic 45.0%
ATGAGCTTGAGTCACGAAGA+TGG + chr2_3:134853-134872 Msa0269370:CDS 45.0%
CAAGCTCTTCTTCAGTTGGA+TGG - chr2_3:134996-135015 None:intergenic 45.0%
! AACGTTTTCCCTCGACCTTA+CGG - chr2_3:135035-135054 None:intergenic 45.0%
CCCCTTTCCTAAAGCAATTC+TGG + chr2_3:135197-135216 Msa0269370:intron 45.0%
AGGGTGAGATATCCCTATGT+CGG + chr2_3:136489-136508 Msa0269370:intron 45.0%
CTCTCTTGTATACCCGACAT+AGG - chr2_3:136505-136524 None:intergenic 45.0%
GTGTAATTGGGAGACAACGA+GGG - chr2_3:136553-136572 None:intergenic 45.0%
CGACCATCATCATCATCAAG+AGG + chr2_3:136572-136591 Msa0269370:CDS 45.0%
GATCATGTCACAACCACTCT+TGG + chr2_3:136734-136753 Msa0269370:CDS 45.0%
!! AGGAGGAGTATTGCTGTACT+TGG - chr2_3:136765-136784 None:intergenic 45.0%
GAACGGTAATTAGTAGGAGG+AGG - chr2_3:136782-136801 None:intergenic 45.0%
CTAGTACAATATGCAGCTGC+GGG + chr2_3:136875-136894 Msa0269370:CDS 45.0%
TGAAGCTGAGACTGGGAAAA+TGG - chr2_3:136939-136958 None:intergenic 45.0%
TACCAGTGCTGCAATGATGA+TGG + chr2_3:136991-137010 Msa0269370:CDS 45.0%
ATCCATCATCATTGCAGCAC+TGG - chr2_3:136996-137015 None:intergenic 45.0%
TGGGGTGATTATGATCCTCA+GGG - chr2_3:137189-137208 None:intergenic 45.0%
TTGGGGTGATTATGATCCTC+AGG - chr2_3:137190-137209 None:intergenic 45.0%
!! GGAGGTGTTGTTACTACTGT+TGG - chr2_3:137209-137228 None:intergenic 45.0%
TGATGATCACGAGCATGACG+TGG + chr2_3:134951-134970 Msa0269370:CDS 50.0%
AGCATGACGTGGTTATGCCA+GGG + chr2_3:134962-134981 Msa0269370:CDS 50.0%
GTTGGATGGAAACGAAACCC+TGG - chr2_3:134982-135001 None:intergenic 50.0%
AGAGTTCTACCTTCGCCGTA+AGG + chr2_3:135017-135036 Msa0269370:CDS 50.0%
TATGACCCTTGGGAACTTCC+TGG + chr2_3:135093-135112 Msa0269370:CDS 50.0%
! TGAGCAGCTTTGGCAGCAAT+CGG + chr2_3:135446-135465 Msa0269370:intron 50.0%
TTTGGCAGCAATCGGAGAGA+AGG + chr2_3:135454-135473 Msa0269370:CDS 50.0%
GGAAAGCAACAGGAGCAGAT+AGG + chr2_3:135555-135574 Msa0269370:CDS 50.0%
!! CAACTGGTTCGGATGCCTTT+GGG - chr2_3:135650-135669 None:intergenic 50.0%
AGCTAGCTGCGTGAAACTTG+CGG + chr2_3:136037-136056 Msa0269370:intron 50.0%
CTCTCTCCCTCTTGCATTCT+TGG - chr2_3:136113-136132 None:intergenic 50.0%
GTACAGTAGTCTACCTGCAC+TGG - chr2_3:136351-136370 None:intergenic 50.0%
GGGTGAGATATCCCTATGTC+GGG + chr2_3:136490-136509 Msa0269370:intron 50.0%
TGTCGGGTATACAAGAGAGC+AGG + chr2_3:136506-136525 Msa0269370:CDS 50.0%
AATTGGGAGACAACGAGGGA+GGG - chr2_3:136549-136568 None:intergenic 50.0%
TAATTGGGAGACAACGAGGG+AGG - chr2_3:136550-136569 None:intergenic 50.0%
CGTGTAATTGGGAGACAACG+AGG - chr2_3:136554-136573 None:intergenic 50.0%
GTACTTGGAAAGCCCAAGAG+TGG - chr2_3:136750-136769 None:intergenic 50.0%
AGCAGCAGCAACATCAACCT+AGG + chr2_3:136849-136868 Msa0269370:CDS 50.0%
! TCTCTGTTAGTCTCCGCTTG+TGG + chr2_3:136902-136921 Msa0269370:CDS 50.0%
TTTCCCAGTCTCAGCTTCAG+CGG + chr2_3:136940-136959 Msa0269370:CDS 50.0%
!! TGCAGCACTGGTAGCAGTAT+TGG - chr2_3:136984-137003 None:intergenic 50.0%
TTGGATTCCAGTCCCACAGT+CGG - chr2_3:137165-137184 None:intergenic 50.0%
TGGATGGCAATAGCAGCAGC+AGG + chr2_3:134796-134815 Msa0269370:exon 55.0%
ATGGCAATAGCAGCAGCAGG+AGG + chr2_3:134799-134818 Msa0269370:CDS 55.0%
GAGCATGACGTGGTTATGCC+AGG + chr2_3:134961-134980 Msa0269370:CDS 55.0%
TACCTTCGCCGTAAGGTCGA+GGG + chr2_3:135024-135043 Msa0269370:CDS 55.0%
CAGCAATCGGAGAGAAGGAG+TGG + chr2_3:135459-135478 Msa0269370:CDS 55.0%
!! CCAACTGGTTCGGATGCCTT+TGG - chr2_3:135651-135670 None:intergenic 55.0%
!! CCAAAGGCATCCGAACCAGT+TGG + chr2_3:135648-135667 Msa0269370:CDS 55.0%
ATGGAAGGAAGCAGTAGCGG+CGG + chr2_3:136704-136723 Msa0269370:CDS 55.0%
! CTGTTAGTCTCCGCTTGTGG+TGG + chr2_3:136905-136924 Msa0269370:CDS 55.0%
TTAGTCTCCGCTTGTGGTGG+CGG + chr2_3:136908-136927 Msa0269370:CDS 55.0%
AGTCGGTCAGAGAAGGAGGT+TGG - chr2_3:137148-137167 None:intergenic 55.0%
CTCCTTCTCTGACCGACTGT+GGG + chr2_3:137150-137169 Msa0269370:CDS 55.0%
GGACTGGAATCCAATCCCTG+AGG + chr2_3:137171-137190 Msa0269370:CDS 55.0%
CTACCTTCGCCGTAAGGTCG+AGG + chr2_3:135023-135042 Msa0269370:CDS 60.0%
TTCCCTCGACCTTACGGCGA+AGG - chr2_3:135029-135048 None:intergenic 60.0%
CTGCCGCTGAAGCTGAGACT+GGG - chr2_3:136946-136965 None:intergenic 60.0%
CCACAGTCGGTCAGAGAAGG+AGG - chr2_3:137152-137171 None:intergenic 60.0%
CCTCCTTCTCTGACCGACTG+TGG + chr2_3:137149-137168 Msa0269370:CDS 60.0%
GTCCCACAGTCGGTCAGAGA+AGG - chr2_3:137155-137174 None:intergenic 60.0%
TCTCTGACCGACTGTGGGAC+TGG + chr2_3:137155-137174 Msa0269370:CDS 60.0%
GGGAGACAACGAGGGAGGGA+GGG - chr2_3:136545-136564 None:intergenic 65.0%
TGGGAGACAACGAGGGAGGG+AGG - chr2_3:136546-136565 None:intergenic 65.0%
GCTGCCGCTGAAGCTGAGAC+TGG - chr2_3:136947-136966 None:intergenic 65.0%
GGCGCTGCCGCCACCACAAG+CGG - chr2_3:136918-136937 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 134762 137477 134762 ID=Msa0269370;Name=Msa0269370
chr2_3 mRNA 134762 137477 134762 ID=Msa0269370-mRNA-1;Parent=Msa0269370;Name=Msa0269370-mRNA-1;_AED=0.02;_eAED=0.02;_QI=37|1|1|1|1|1|3|240|443
chr2_3 exon 134762 135114 134762 ID=Msa0269370-mRNA-1:exon:72;Parent=Msa0269370-mRNA-1
chr2_3 exon 135453 135721 135453 ID=Msa0269370-mRNA-1:exon:73;Parent=Msa0269370-mRNA-1
chr2_3 exon 136491 137477 136491 ID=Msa0269370-mRNA-1:exon:74;Parent=Msa0269370-mRNA-1
chr2_3 five_prime_UTR 134762 134798 134762 ID=Msa0269370-mRNA-1:five_prime_utr;Parent=Msa0269370-mRNA-1
chr2_3 CDS 134799 135114 134799 ID=Msa0269370-mRNA-1:cds;Parent=Msa0269370-mRNA-1
chr2_3 CDS 135453 135721 135453 ID=Msa0269370-mRNA-1:cds;Parent=Msa0269370-mRNA-1
chr2_3 CDS 136491 137237 136491 ID=Msa0269370-mRNA-1:cds;Parent=Msa0269370-mRNA-1
chr2_3 three_prime_UTR 137238 137477 137238 ID=Msa0269370-mRNA-1:three_prime_utr;Parent=Msa0269370-mRNA-1
Gene Sequence

>Msa0269370

ATGGCAATAGCAGCAGCAGGAGGAGCAGCAACATCATCACCTAACATGAGCAGCATGAGCTTGAGTCACGAAGATGGAACTGCTACTACTTCTAACGATAATAGTAACAAAGGAGCTACAGCTACAGTTACAGTAGTAGATGATGATGATGATGATGATCACGAGCATGACGTGGTTATGCCAGGGTTTCGTTTCCATCCAACTGAAGAAGAGCTTGTAGAGTTCTACCTTCGCCGTAAGGTCGAGGGAAAACGTTTCAACGTTGAGCTTATTACTTTTCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGCTTTGGCAGCAATCGGAGAGAAGGAGTGGTACTTTTATGTGCCTCGAGATAGAAAGTATCGAAACGGTGATCGTCCTAATCGTGTAACAACTTCTGGTTATTGGAAAGCAACAGGAGCAGATAGGATGATTCGAACTGAAAACTTTCGTTCAATTGGACTCAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCCAAAGGCATCCGAACCAGTTGGATTATGAATGAGTATAGATTACCCCAACATGAAACCGAACGATATCAAAAGGGTGAGATATCCCTATGTCGGGTATACAAGAGAGCAGGAGTAGAAGATCATCCCTCCCTCCCTCGTTGTCTCCCAATTACACGACCATCATCATCATCAAGAGGTACTACTGCTTCACATTCAGACAAGAATAAGCAGCAAAATGAAATATTGGGAATGGGATTTGTTGTTGGACAATCACCAAAGACAATTGATGATCACATAGTTAACAAAATGGAAGGAAGCAGTAGCGGCGGTAATTCAGATCATGTCACAACCACTCTTGGGCTTTCCAAGTACAGCAATACTCCTCCTCCTACTAATTACCGTTCAGAAGATGAAGAAGGATTGATGATGATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACATCAACCTAGGCAACTAGTACAATATGCAGCTGCGGGAAACTCTCTGTTAGTCTCCGCTTGTGGTGGCGGCAGCGCCATTTTCCCAGTCTCAGCTTCAGCGGCAGCAGCAGTGAGCTGTTCCAATACTGCTACCAGTGCTGCAATGATGATGGATGATCTCAATAGGCTTGTAAGTTATCAACAACAGCAATATTGTTACAATGTTCAAAACCCACATCTCAATCATCCAAATCCCAATCATTTGTCTACATTGCTGATGCAACCAATGTTACCAAATCAATTTCCAACCTCCTTCTCTGACCGACTGTGGGACTGGAATCCAATCCCTGAGGATCATAATCACCCCAACAGTAGTAACAACACCTCCTTCAAGTAA
Protein sequence

>Msa0269370

MAIAAAGGAATSSPNMSSMSLSHEDGTATTSNDNSNKGATATVTVVDDDDDDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSRGTTASHSDKNKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSSSGGNSDHVTTTLGLSKYSNTPPPTNYRSEDEEGLMMMQQQQQQQQQQHQPRQLVQYAAAGNSLLVSACGGGSAIFPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHLNHPNPNHLSTLLMQPMLPNQFPTSFSDRLWDWNPIPEDHNHPNSSNNTSFK*